TCONS_00026595 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026595
Unique NameTCONS_00026595
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length337

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026595 ID=TCONS_00026595|Name=TCONS_00026595|organism=Clytia hemisphaerica|type=transcript|length=337bp
AAGTGGTGGATAGCGAACTAAAagttaatgaaaaaaattaacagaTGTTC
CCTccctttttgtgattttgagaaGGCTCTATGCACTATGATTAAAGTGT
GTATATTAAGCTGTTAGATGTATTGCATTATACATTTTCTAATTATAACT
GACTATTTGAAAAATACTTGTTGGTATTATTTCTTTCTTCTCATCCAAAC
ACTCCAGAACATCTAGGTACCTGCCAGAGGACAATCTATCATGTAATGGA
TTTGCCAAGTGGAAGACATCGTCACATACATGACAAAATGATTTGTGACA
ATCCATGCAATAAAGATCACCAAGTCGATCACAACNN
Run BLAST on NCBI

transcript from alignment at sc0000575:219034..219370

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026595 ID=TCONS_00026595|Name=TCONS_00026595|organism=Clytia hemisphaerica|type=transcript|length=337bp|location=Sequence derived from alignment at sc0000575:219034..219370 (Clytia hemisphaerica)
NNGTTGTGATCGACTTGGTGATCTTTATTGCATGGATTGTCACAAATCAT
TTTGTCATGTATGTGACGATGTCTTCCACTTGGCAAATCCATTACATGAT
AGATTGTCCTCTGGCAGGTACCTAGATGTTCTGGAGTGTTTGGATGAGAA
GAAAGAAATAATACCAACAAGTATTTTTCAAATAGTCAGTTATAATTAGA
AAATGTATAATGCAATACATCTAACAGCTTAATATACACACTTTAATCAT
AGTGCATAGAGCCttctcaaaatcacaaaaagggAGGGAACAtctgttaa
tttttttcattaactTTTAGTTCGCTATCCACCACTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014956XLOC_014956Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026595-exon-sc0000575-1491911889:219034..219370TCONS_00026595-exon-sc0000575-1491911889:219034..219370Clytia hemisphaericaexon
TCONS_00026595-exon-sc0000575-1510915933:219034..219370TCONS_00026595-exon-sc0000575-1510915933:219034..219370Clytia hemisphaericaexon
TCONS_00026595-exon-sc0000575-1575043694:219034..219370TCONS_00026595-exon-sc0000575-1575043694:219034..219370Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000575supercontigsc0000575:219034..219370 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.31803	3.01573	1.98149	1.9302	4.53259	3.83971	5.34512	9.00727	18.2508	23.2766	21.6908	14.3555	14.402	17.0429	7.75228	11.5525	14.5597	16.7825	10.8719	14.4446	17.3719	13.0919	6.89497	8.13524	0.892745	3.98377	25.188	13.0354	14.3437	15.8994
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026595 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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