TCONS_00026576 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026576
Unique NameTCONS_00026576
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1738

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026576 ID=TCONS_00026576|Name=TCONS_00026576|organism=Clytia hemisphaerica|type=transcript|length=1738bp
GTTCGAGTCCTTGCCGGTTCTGTTGGTTTTCCAGCGGTTCTGCAACGAAT
TCGACCATCGTCAATCAATATGCAAAGAGTTGTACATTCGGTGTAAACGA
TACGCTTAATTATAATACGCCTTTTGAGACCATCGTCACTGAGTGGCGTT
TGATTTGTGATGAAAGTTTCATTCCGACAACAATTCAAACCACACAAATG
GTCGGTGTTCTGTTTGGTTCAGCATCTTTCGGACAGTTAGgtgatttgat
tggtcgaaagtATTGTCTACAAATCTCTCAGTTGTTGCAGATCATCGCAC
TTTTGATTCAGGGGTTGTCTTATAATTGGTACATGTTCATATGCAGTTCT
TTTCTACTCGGTCTTGGTGCTGGAGGGTTTCTAGTGGTAACAAACATATA
CATGCTTGAATTTATTGGAACCAAATGGCGGACACTGTGTGCCACTTTTC
CCGCCTGGGGTATGGGCGTCATTCTTTTTGGGGCGTTAATCAAAGCTCTC
CCCAATTGGAGACATATGTGTTATCTGGCGGCCGCCCTCAATGTACCCAT
GGTTTGTATATCTTTGTTCACACCACGAAGTCCGCGTTGGTTATTCACGA
ATGGTAAAGCTGAACAAGGAAAAGAAGCCTTGGTCAAACTGGCCaagcaa
aataaaaatgagaCTCCTGATTTTGTGCTTCTTGAGAAATTGATTGACGA
AGAAACACGTAAAGAAAAACAGAGTGGATCTTACACTTATATGTCGCTAT
TCAAGTTCAGTTCAACGAGAAAGAAAACATTGCTTCTAAGCTATGTATGG
TTTTGTTGTGGGTTTTCATACTATGGTTTAACACTGGGCATTGGTACACT
ATCAGGTGATATGGCTATCAATTATATGTTCATGGGAATCGGTGAGCTGT
TAATCACTCTTGTTGTCATTGGTTCAGCTAAACTATTTGGTCGTAAATAT
GGTTCCATCATCTTGTTCGTTTTATCTTTTCTAACCTCGTTTTCAATCAC
AATTTCTTACTTCACCACGTCTGACGAGACTTTCCAAAGTGTAATGAATT
GGTTGGCTCTTTTGTCAAGATTTTTCTTGGCTGCTGCCTGGGGACAAGTT
ATTGTATACACTGCAGAAATCTATCCTACTGTCATAAGATCTGTCGGATA
TGGGTTTGTATCCGTCATTGCACGCATCGGAGGAATAGTTGCACCTCAGA
ACAAAatacttttcaaccaatcacaACATCTACCTTTCACTATCAATGGC
GTTTTGATCCTCATTTCATCCTTGGTAATATTGATGTTGCCGGAGACGAT
GAATTCACCAATGGCTGACTATATTGGTGAGAATGAAGAAGGTGAAGCTT
GTAATGAAGAATCAAATAAAAGGTCCAATCAAGTGATCCCGTTTAACTAG
AAAACACCTATCAGTGACGATGCTAAATCTGATTGAATCCTTTTATCATC
TTGTCAAAGATCAGGCGTTAAAAATGAAGACATCTATTTTGGAGACGGAT
TTGGTCCAAAGGACTTCAtctgagtttttgatttttctaaaacagcgata
CCCccgggtattacaatagaattccctcaagGAATTTCTAAGAGATTttt
attgtaatacccccgaaacaatcccacaatgcatcgcttttttagaaaag
tcgAAAACTTCGATAAGATCGATTATAAGAGGACCCAATTTGGgcaattt
tggaattttataagttttgaatttttggaatCGGTTCT
Run BLAST on NCBI

transcript from alignment at sc0000575:42061..56292-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026576 ID=TCONS_00026576|Name=TCONS_00026576|organism=Clytia hemisphaerica|type=transcript|length=14232bp|location=Sequence derived from alignment at sc0000575:42061..56292- (Clytia hemisphaerica)
GTTCGAGTCCTTGCCGGTTCTGTTGGTTTTCCAGCGGTTCTGGTGACTGA
TTCGAATCTCTATTATTCAAATATTTCTGTAATTCGAACAAAAATATTGA
TCCCCTCAGCGGGAAAGTGGTTTAAATTACTCTCTGTAATTCGAATAAAA
ATTTTGGTCCCTTGATTATCGAATAAGGGAGAATGTACTGTATTCCTTTT
AATTTTAGCAACGAATTCGACCATCGTCAATCAATATGCAAAGAGTTGTA
CATTCGGTGTAAACGATACGCTTAATTATAATACGCCTTTTGAGACCATC
GTCACTGAGGTGAACATACTTTGTTTTTGCTCCGAATTTTCTCAATTGAG
CCCAGCATCTACTATTACATGTTTTTTTTTTCATAAGAATAAACTATATA
GGTAAATAAGGCTTCGATTGCTAAAATATTAAGAACAAGTTAAGAAGATT
TTAAGGCCTTGTGGATTTTAAGTACCCGACATCTTAGGAAAATGGACAAA
AACACTCACAAAATTGTCAAAATAAGAACATGTCAGAACATTTTTAAGCT
TTAAACTCAAAAATTTAAGAACATCCAAAGGCTTAAAAAATATTGAATGT
TCTCATAAAAAGTCCTGTATCTAATCGTGTGATAAATTACTTTTTGGTGG
AATAATTTTTTTTCACCGGCGTGTTTTTAACCTATGTATTGATAGGAAAC
TGCTCTCATTGATTTGCAAACGAAGGGTATTTTAAATCTCCTTTTGTTTC
TTTAATTGATTCACCAATGATTAAGTTAAAGGTCGAAAATTGGGATGAGC
TGGAGTTTTTACAAGATACTTCACTAATTGGTCATTTGAAGTGATAGAGA
TGACGCGTTCTTTAGAAAAAGTAACAAAATTGTTTTATTACTGGTTAACG
ACCAACCAAATCAAATAAGAGCTTGTAAAAACTCCAGCTTGTCCCCGAAA
ATTGACTTTTACTATTTGTCTTAAAGTGGTGGTTGAAAAGTTCGATTTCA
CATATTTTAGATATCCTGCTTTCCTGAATCAACTAGTCTCAATTTCACTG
CAAGCCTGAATAAAATAGTACAAAGGTTCCGAATAGTAAGGGGTAGTCCG
CATAAATAGGGCATTGAAAATTTTTTTAAATACTATAAACGGGGGGCCTA
ATTGCCGGGGTTGGAAGTTGCACCTAAATTGACCCCGCATAAGAAGGTAA
TTATATACCAAAACCAGGTTATCTAGAGAAATTCAGCTTTAGATAGCTGA
AAATATTTTCGGTTTAAAAGTGATACAAGATGATACATTAATGTGATTTC
TAGTCACGCTTTTGATGCTCTCATTCTTCTTTTTCAGTGGCGTTTGATTT
GTGATGAAAGTTTCATTCCGACAACAATTCAAACCACACAAATGGTCGGT
GTTCTGTTTGGTTCAGCATCTTTCGGACAGTTAGGTGAGTTGCTTTTTTC
GGACTGTTGAATGGGTTGCTTTTTTCGGACAGTTAGGTGAGTTGCTTTTT
AAAAACAGTAAAGTGAGTTGCTTTTTTCGGACTGTTGAATGGGTTGCTTT
TTTCGGACATTTAGGTAAGTTGCTTTTTTAGGAGAGTTAGGTAAGTTGCT
TTTTAAAAACAGTAAAGTGAGTTGTTTTTTTTGGACAGTAAGCTGAGTTG
CTTTTTTCGGACAGCTAGATCGATTACTTGTTTCCGGACAAATAGGTTGA
GTTGTTGTTTTCGGACAGTTAGCTGAGTTGCTTCTTTCGATGGTCTGCTT
TTATTAACAATTTAAATATTACAGTCAGCTAAATCTATTATTCGAATCTT
TCTATATTTCGAACTTAAACATCTGTCCGTTCAGCTGGAAAATCGCATTT
CTCTGATTTTATTTCATTCTCTAATTAAGAAGAAAATTCTTGGTCCCTTG
AAAATTCTTGGTCCCTTGAAAATCGAATTAGAGTGAGTCGACTGTAATAT
AATACTTAAACAAGCCGATGCCAAACGAGATATTGTAAATAAAAATCGTA
CACTATTCGGGCATCGTTAGATTTTAAGAGGCATCGTAAGATTTAAAGGT
GCATAATTTGATTTAAAGGGGTATCATTAGAGTTTAAAGGGCATCATTAG
AATTTGAGGGACGTCATTGGATTTTAAGGAGCCTCATTAGATTTTAAGGG
ATATCATTGGATTTTTAAAGGGGTATTATTAGATTTTAAGGGGTATAGTT
AGATTTTAAGTGACAACATTAGATTTCAAGCCGCATCATTAGATTTTTAA
AGGGGCATCATTAGATTTTAAGGGGTACAGTTGGATTTTAAGTGACATCA
TTAGATTTCAAGCCGCATCATTAGCTTTTTAAAGGGACATCATTTGATTT
TAAAGTGCATCATTATATTTTAAGGGACATCATTGAATTTCAAGGGACGT
CATCGGATTTTAAGTTACATCATGGATTTCAAGGGGCATAATTAGATTTT
AAGGGACATCATTAAATCTTAAGAGGCATCATCATCAGCATCATCAAAAT
TGAGTTTGGATACTTCTAAAAACTAATGAAACCATGGAGAGTCTTTCCGG
TTTAAGTTGTAAACCGATATGGTTACATGGGCGAGATTTCCTTTCCTGCC
AGTAAGCTCTGAAAGAAATCCGACACTGTACTGAGACAAGCAATCATTTT
ATCTAATATTTATATACATTTGTTTAATTTTCCTAGGTGATTTGATTGGT
CGAAAGTATTGTCTACAAATCTCTCAGTTGTTGCAGATCATCGCACTTTT
GATTCAGGGGTTGTCTTATAATTGGTACATGTTCATATGCAGTTCTTTTC
TACTCGGTCTTGGTGCTGGAGGTTCGTATCGTTTAAAGTCGACTCTCACT
AATTCGAACTCGAACGGTGGTATTCATTTGTTCGAATTAAAGAGAGATTT
CAATTATAGAAAGTATTTCAAGAGGGTTTCACCTTTACGGGGACTGGAAA
AAAGGCCGAATTATAGAAAGATTCGAATAATAGAAGTTGCAGCGAGAGTG
AACTGTATTTACTTGCAAACAAGAGGTCTAACAACTTACGAAGATTTTTT
AATGGGTATGATTTTTACCTACCATCCACCTACACAACTTTTTTGAATAA
AATAAACATTAAATATTTCCCCCTCCCGCGCCTGGCACGCACAAAATTTG
ATAAAAATTATTTTGTTTTTTTTTGCTTTGTCAGCATAAGAGGTGCGCTG
TCATCACGAAAATCGTTATCCCAGCTGGCCCACAACGTTGTTACAACGTT
CATCTGACGTTATATATACGTTGTGAACATAAGATAAACGTTAAAACAAC
GTTGTGTGCCAGCTGGGTATGATTACACGCAAGCAACCCCGGTCACCCCA
TCCTTAGCCCGTTCTCATTGACACGGTGGAGATTAAGACTATTGTCTATT
TTTCATCTTGAATCTCACCGTAATTCCACCTTCAGGGATCAACGAATTTC
CTTCGAATAAATTTTCGAATTTCAGAGTCATTTGTCAAGCTTAAGGGAAC
ATTATCGTGTTATTTCAAATCAGCGAAAGTTGGAATTACGAAGTTCTAAA
TATGTGAGCTTTCTTCGAAATCTCTACTTGCTTTATCATTCATATTTCAG
GGTTTCTAGTGGTAACAAACATATACATGCTTGAATTTATTGGAACCAAA
TGGCGGACACTGTGTGCCACTTTTCCCGCCTGGGGTATGGGCGTCATTCT
TTTTGGGGCGTTAATCAAAGCTCTCCCCAATTGGAGACATATGTGTTATC
TGGCGGCCGCCCTCAATGTACCCATGGTTTGTATATCTTTGTAAGTGAAA
CTTTTCTTTAGTTTCTGCATTTTATTGCCTGCATTTCATTTGAGAATTGA
TGGGAGATGTGTCAAGGGTCCAAAAAGAGTCCAGTTCAAAGCATTTTGTT
TAGTTGTTTTCAATGTTTTATATATAATGTTCATATACTTCTTGTTGACA
ATAGTATAATGTTCATATATAAATTTATTTTGTTTAGTCGATTTGTTCCT
ATGGAGGAATAATCGATGATAACTTTAGAAATAGCCAGATTTAATAAATA
TTTTTCAAAGATATTTGTAGTTTTTCCAAAGAATATGACTCATATAAAAG
CCTGTGTACAACTCGTCTAAAGGTCAGTTTTTATAGCCCAAACAAATGTT
GTTTTTTCAAAACAACCTGGGTGTACCATTCTAATATATTGAATCAATAT
CGTTAATAACCGCAAAGTACATCCCCTCCTCTTCTTTTTTCTAGGTTCAC
ACCACGAAGTCCGCGTTGGTTATTCACGAATGGTAAAGCTGAACAAGGAA
AAGAAGCCTTGGTCAAACTGGCCAAGCAAAATAAAAATGAGACTCCTGAT
TTTGTGCTTCTTGAGAAATTGATTGACGAAGAAACACGTAAAGAAAAACA
GAGTGGATCTTACACTTATATGTCGCTATTCAAGTTCAGTTCAACGAGAA
AGAAAACATTGCTTCTAAGCTATGTATGGTAAGTGAAATAAATATTGATC
AATAAACCTTTTCATAAATCACGTTACGAACATCATCTGCCTCGTTTTGA
AATTATTGTCATGGTGATTTACTACCAGTGGATTTGATTAAAACTACTTT
CTATGCATAAAGAAATCATTTAATGTCTCAAGGGACATAATCACCATGGT
AATTGTTTGAATAGAAGGTAAGTGATGTTCGTGACGTAATTTATGAAAAG
TGTGTGGAGAAAAAATCACAATTAGCAGTCCCGGCGTCGTCCGAGACGAT
TCTTTACCATAATAATTAAGCACGCTTCGCTCGCTGTCATTATTGAAAGA
TAAATTTATCTCTTACTTGTGAGAAATATGTAAATCATTTTTTGTATTTT
CAAAAGTAAATGAACAATAAATTTTTTTTGTATATTGAACGGAAAACAGA
TTTAAAAAAATTTTCCTATTTTTTACAACGAAAGTTAGATAAAACACATT
TTGTATTTGGTAAGAAAAGCAACCTAAAGCATTTTTCAAGAAAAATCAAC
AAATACAATTTCTTGTATTTTCCAAGGAAAAAAATACATAAGATAATATT
AATATGTTTCAAGAAAATTATCTAAAGCAATTTATAGCTACTTTCACCAA
GTTGATTTTTCAAGAAAAATAAAACAATGGTAGGGTTATTTGAAAAGCAA
ATCGAATCGAAACTGTCATTATTTTCAAGGAAAGAAGATCTTGCATTGCT
AAAATCTACCACAGTCAAAAGTATCTTGTAAAACTATTTTTATGCTAGGA
GTAGTTTAGCCATCGTGGCTAGCCATCGTGCAGACATTCAAGTATGACTC
TGATAGATAGACTTTGAATAGCTTTGAAAACTAAGGTATTCACAATTGAA
AAAGAAAGCGAGTGACAGTTTCAAAACACTCTTAAGTATGTTCAAAAAAG
GAAGATTAGAAAAGGGCAGAGGGCAAGGTTCTCTAAAAAGTGACTGAAGC
CGTTTTATTACGGGAAATATCTTTTGACCGTAAAAATCAGATTTTCTTAT
TTGGGGAAATTCCATTTTGTCATTTTCAGAGAAAATGAGCATTTCTCACG
ATTGGCTTGGTATTTGTATCTTCTTACTTCTGTTGCCATTTATTCCACTT
TCTTATTATATAAGCCTTCAGGTAGGTTCATTCAGCATATAGCTTGTTAT
TCAGTGATATTTGAAGCCAACAACTTTTAATTTTGCAAGATATTATTTCG
AAACTCTATCATCAGTTTTATTAATCGCTGAAATAAAAACAAGTGAAAAC
AGGTTAAAATACTGTAAACAAGCATAATCTCTAAAGAAAATGCTTATTTT
TAATGTAAGTAAGCTTGTTATTCGTTGATTCGTTGACCATTTTTCAAATC
ATCGAAAATCCACTCTGAATCTCTTAGGTTTTGTTGTGGGTTTTCATACT
ATGGTTTAACACTGGGCATTGGTACACTATCAGGTGATATGGCTATCAAT
TATATGTTCATGGGAATCGGTGAGCTGTTAATCACTCTTGTTGTCATTGG
TTCAGCTAAACTGTGAGTTGAAAGTTATATTTCTACAAACACGCTTTTTT
TTATAAGAATGGTGTTTTTTCATTTCAAAAAAATTCTTACGGTATTCTTA
GGTTAAGATCGAAATTGGCAATCTACAGGTTAAAATGCTTTAAAAATGGC
ATTCTTAATCTTAGATTTAGTTGCTAAATTCCATGATAGTGATATTCCTA
CCTTATTCCTAATTTTTTGGCCATTTTCATCATGGACATTCTTATAAAGT
GTATTCTTATAATAAAAAAGCGTGTAAGTGTTCTGGTTTCATATCAGAAA
CATTTTTCATATTCAAAACCAAAAGTTTTTAATAAAATGGTACTTGATGC
CTCTCCATTTGGTGCCTAGGTATTTAGAGAAGGATCAAGAGTAACTGAGT
GGAGCAATCCAGGGAGAGAATTGGCGTCTTCTCCTACTTTTGGGTAGACA
GCTATCGAAAGAGAAGCATTCAGGTTTATGTAGCTATAGCGTATCGTGGG
GCCCGATCTAAGGTACCCTTTATCAAAAATCCAATGAGGCCTCCCAGGCG
TTCGCTTGATAGAGTGATTTATGATTTCAAAAAGCGCAATGCGTGATTAA
TATGACACATGTCGTATGGGATGTCGTGATTTGAATTTCTTTTTTATTAG
GGATATTTAAGCAAAATGGGTGCCGGGTATGTGCGAGCCATAACGGTCCC
TTTTCACGCCCTCCAAAGTCCTTCAAAGGGGCACAAAATCTTTAAAAAAC
AATTGAATCTCTGTAAGTGCTTCAAATTTACGAAAATAAAAATTCGATTC
CCTTCCCATAAATTTTTTGAAATTTGGACTAAAATTTGTCTGATTGTAAT
TTTAACCATTTTCTCCAGCTAATGTTTTGGTTCGAATTACAGAAAGATCC
CAATAATAGAGTTTGGAATAAGTTTGACTGTATTCTTTAATCTTCTTTTC
TTGTAGATTTGGTCGTAAATATGGTTCCATCATCTTGTTCGTTTTATCTT
TTCTAACCTCGTTTTCAATCACAATTTCTTACTTCACCACGTCTGACGAG
ACTTTCCAAAGTGTAATGAATTGGTTGGCTCTTTTGTCAAGATTTTTCTT
GGCTGCTGCCTGGGGACAAGTTATTGTATACACTGCAGAAATCTATCCTA
CTGTCATAAGGTAAACATATTTTCGTCTTTTCGTAACCTGTCTGTCGGGT
TGTAACCACAGATGTCATTTATAGAAAACTGGATAGAGTTTTTCTTTCTC
TATTTGTAGCAAAATAAGTCGACATCTTGAATGAAGTGACGTCACAATTT
AGCTTGAAATTTGAAGTCATTGCAGTGTCAAATAAACTAAAGCCGGAACT
AAGGTTTCTACTGTGGTTTTCAGCAAAGATGGCGGGTTGTTTATGCTTCA
CCTGCCGTTGCCCTTAAATAAACAGATTACAGCAGGTCTAATTAGTGTTT
TATATGAGATATCTGTTTTTCGTAACCCATTCAGATGCTGAGTCATAAGT
CACTTGCACATCATTTTCTGAAGGCATTTTTTTATAATTGACCAGTTATA
GATGCTTCAACATTTTTCGAGGACATTTTTCATAGGTTTTGTTGCGTTTG
AAAAACTTAAACATTGTCTAATTAAGCATTTGCTGAGCATTGAATTCACT
CAGAATTTATCAAATTACAACAAAGAATCTCTGTTAACATTACCACTCTA
TTACAAATAGCCATACTTGAGGCTCAAAATACATATTTTGCTGGTGTAAT
AGTTATCACACGGTACCGAGTACAAAAAAGGATATATTTTTCAGATAGTT
CAGATAATATTTCGTCATATTTCCCATCCCTTAAGGCGAGAAAAATATCC
TATATTATACGAGTAAAAGTGTGGTAACTAGTTTGTCATCAACTTGACAA
AAATATCAACTACCTTAGAGGAAGAAATTTTGGCGGAAAGAAAATATGGC
GGATTCGGTGGATTTCGCCAAAATCCGCCAAATTAAGTTCCCACCAAAAT
TTATTTTTTCCTCCATCCGCAAAATTAATTTCCCGCCAAATTTAATTTAA
TTCATGCATTCCCCAAATTTGTGCTATTTCAAGCCTTAAAGCAGTGTTTT
TTTGCTCATTTAAAAACGCTTTTGGCCAAAAATATCCTGCAACCGCCAAA
TTAAATTCCCGTCAAATTTACTTTATCTATCTATCCGTCAAATTAAATTC
CCTCTGAAAAAGCTTTTTCGGCCATCCACCAAATTAAATTTTCACCAGAA
TTTCTTCCTTTAAGGTAACTTTTTTCTCTCCATTTGCGTGTCTTCTTCTT
TGTTTTGTTTTTCTCTTCCAATAATTGTTTTCTTTTACTTTTAGTGGGGG
CGTACGGTTTTTCGGAATTGCGGAAATCGACCCTTTTTTCTTCGGAATTT
CAGAAATCAGGCAAAATTCCTTCAGTATTTCTGAATTCTAAAATTGTTTC
GGAATCGGAAATCCAAGAATTTTTGCTTCGAAATTTCGGTATTATAAAGT
TTTTATCCCCTTTTTTCGGAATTCACACATGCAAAATCAAATTTGATGAA
AAATTAGTGAAAACCAAGCAAATACCCAAAAAAAATTGGTATTTGAATTA
CAAGTATTTTTTTACGGAATTTCGGAAATTTTGGCAAAAACATTCGGTAT
TTCGGAAATAGCAAATCCCGTACGCCCTAGACTGGAGTCGTTTATAATGC
ATGTAATACTAATAATAAACACAAATAATGATACGGGATTTAGTTTGTAT
AAACGACTGGAAGAATCCGGTGTTCCANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTTCAAGAACTTTTTTTGAGCGGGAAAAAATT
TTAATTGCGATATTGACACTTTTTTTTTGTTTGGAGTTAGTGCACAAAGG
TTTCTAGACGACTAAAATTTAATTTTTTGCTTTATTTCTAATATGTCTGA
ATTAGTCGTCTAGCTTGCTAGACCCCCCCCCCTTTTATATTTAAAAATGA
AATCAAAATCAAAACATTTGAAAAAAGAATCGAATAGTCATTAAAAAAAT
CAAAACATTTTGATAAGTTGTTGTATACTGGAAACGAAGAGATAACCTTT
CTAATCCTAAAATTGTACAAAATATGATCTCTCTTTTAAGAGACCCCTTT
TTTGAACGTGGTCTTGTATTTGTACGGTATAATATGAAATACAGCATTTA
TGTATTACGCGTATTAGCCCGCAATCAGATTACTCATATTTTTCATGTTG
ATGATAAGAATAATAAAAAAGCTTGTCTCTTGACAGATCTGTCGGATATG
GGTTTGTATCCGTCATTGCACGCATCGGAGGAATAGTTGCACCTCAGAAC
AAAATACTTTTCAACCAATCACAACATCTACCTTTCACTATCAATGGCGT
TTTGATCCTCATTTCATCCTTGGTAATATTGATGTTGCCGGAGACGATGA
ATTCACCAATGGCTGACTATATTGGTGAGAATGAAGAAGGTGAAGCTTGT
AATGAAGAATCAAATAAAAGGTGAATATTGCTTACCGCCATGGTAGCTTG
CTGGAAATATTTCACTCCTTAAGGCTGGTCTCCACTTGCGCGCGTTGCAA
TCGCACCTTTTGGCTTCAATCTATTTTGCTCGGAAAAAGAATACGTCATA
AAAATGTAGCGCGCGATCGAAAAAAAAGTTGAAAACATCTCAACTTTGTT
CAACCGTTACGTCATATCGCGCCAATGGAATTGCTTCATTTTTCTTTTGA
CTAATAGCGTTGTAGCTTCGCTCGAAAAAGTGCGATCGCAGCGCACGCAA
GTGGAGACCAGCCTTTAATCGTAGGGTGAGATTGGCGTCACTTGAAGTCA
TTGCAGTACTGCTTTAAGGAACTGACGTCACTTTAATAGCGAGGTTAAGC
AGGAGTTTATTTTGTGCCGTAAGCGCTCTATACCGTGGGATTTTCGCGGG
CTAGCGCCAAACTCCTGAGGCTGCTTGTGTCCTGTGGATTTTGACCTGTA
CGTCGTTGGTTGGGGAGTGGATCTAGGCCGTGAAATTTCACAAAACAACG
GTGTCGAAATTGCTTAGGATCTAAGGCACTTTTTAGCCTACGGAGATTGG
ACTGAATCAGCTAGGGTCAAAATCACCCGGGAAAATAGATAAACAAAATA
AAAAANGATCTTCATCTTGAGGATTGTGGAAACCAGTTTGGATGCTTTCG
CTTAAAGGGTACGCCGGATCACCATAAACACACAAACGATTCCCATTAAC
ACCAACCGAATACCTTTCAAGATTGTCCAAAATCCCAGACTGTGCTAACA
AATACGAATCATGGCGAGATCCTTCAAGTGGCCCAAAGAAGTTTGCTACC
ATTCCATTAGGAGTTGATATGGACTGAAATTTGAAACCGTGAACTCTTTT
ATGCCCATTGTACATCACCCTTTGCATTAATTTCGGGCGGGCTATGGGTC
GGAGGGTTCCGTCAATGAATCCCCAGCAGTTGTCAAGTGGGCCTCCTTTG
GTGTGGATCCTCTCGGCATAGTGTGTTAGACGCTCAGGAGACAGCCAGGG
TTGATCAAACGATTCCAGCAAATGGATAAAGTTGGTGCTTATGTGGTCCA
ACACATGATTAAATACCGGGTGCGCCACAAAAAAGTTTCTCTCTTTGAGA
CTAATTTTCTCGGAATCTAAAAACTTTAGAAGAACCACTCTTATATCATT
GGAAAGAAGAAAGATAGACTTAAATTTTGATGGGTCATTTATTAAATTCG
ATTCATTAGATCACAAGTTATGCTCAATTGAATAAAAAAGTTACTTTCAG
AAAGTACTCGAAAACGGTAAAAATCGACCTATCAAATTTTTGCTTTAGAT
TTGGCAATTGCATTAGCCTTTACATGATTATGAGCATTTTTCAGTAACAA
AACACATAAATTTTGAAACTGAAGGGTCGAAAGGGTTTAAAATCTTCATC
ATAATCAATTTAATTTAGTTTTACCGAAATTTTCGTCAAATTTTTGGATC
TATACTGGATAAAGTCTATGTAAGGCTGGATCTACCTCGAAACCCATATT
TGATGTATTTTTATGAATTTTACCAAATTATTTGGCCTTTTTCTACGGAT
TTTCTTCCTTTCATTGAAATTCAACCTCCTTTAAATAACAAAAGGTCATT
TAGATNGGATCACCATAAACACACAAACGATTCCCATTAACACCAACCGA
ATACCTTTCAAGATTGTCCAAAATCCCAGACTGTGCTAACAAATACGAAT
CATGGCGAGATCCTTCAAGTGGCCCAAAGAAGTTTGCTACCATTCCATTA
GGAGTTGATATGGACTGAAATTTGAAACCGTGAACTCTTTTATGCCCATT
GTACATCACCCTTTGCATTAATTTCGGGCGGGCTATGGGTCGGAGGGTTC
CGTCAATGAATCCCCAGCAGTTGTCAAGTGGGCCTCCTTTGGTGTGGATC
CTCTCGGCATAGTGTGTTAGACGCTCAGGAGACAGCCAGGGTTGATCAAA
CGATTCCAGCAAATGGATAAAGTTGGTGCTTATGTGGTCCAACACATGAT
TAAATATTACACACAATGTTTCTTTGGGTCGACCAAATTTGGGCATAAGA
TCAATAAACCTGCAAGGAAACGCCAAACGTCGTAACAACAAACACAATGC
CTCAACTGAACTGCACCTCACTCTGTTATGTGTAATAATTTCATCTCCCA
AACCAAAAGCTTCAACAAGTCTTATAATGTCAACTTTCTTAAATCTTGTA
TCCACTCGACACTCTTCCTCTGACCACGCATCAAAATCAAATGGCGCCCA
CCTCTGCAAAACTCTATCATTACGTGCATCATTTCTAACCCCAGCATTAG
CAGCTATCATTAATAAATTAAAATCCTCATCTTCAAGCACACCTGCCAAG
TAAGCTCCCACAAGTTCATCCACAACATCAACTTCACCATCATCATCATC
CTCTTCATCACTATCATCAGCTTCATAACCACTACTAGAATCACCATCTT
CGTTCTCACTGTCATCAACATCACTTACTAAAACCTCATCATCAGAAGAC
TCAAAACCATCACCAACATCAGAATCAACAACAACATCAGAATCAACAAC
AACATCAGAATCTTCATCATCTCCACTGGAACTGTCAACAATCATTTCTT
CTTCATTTTGATCACCAACAGCAAAATCAATCTCCATCTCTTCATGATTG
GCAGCATCCATTTTAAAAGCACTTTATTCTTAGACGTCTGAATAAGTCTG
AAAAAGAAAGCTGAAAAACAAAAACCAAACAAAATTTTTTGAAGCTGGAA
CCGAAAGTGAAAGGCGGCAAAACAAACATTACGTCACACGGCATAGATAG
CCTCTCTGCTTAACTGTTTTTTTCCTTAATACCGTAACGTTATAGGAGTC
AGGCTAAAACACCCCGGACTGAGCCTAAAACCTTACGGTACGGCACAAAA
TAAACTCCTGCTTAACCTCGCTAATGTAATGAAAACACGCAAGTGGCATA
CTGACTGATCATTCGTCACTTACATTACCAATCAGCCGTTGGGTCCACAA
TGTAATGTCAAAAGACATTGCAATGGTGCATATCATGAATAAACTGTCAG
CAAAGTGAAAATGAATGGCATCAATGCCATGTCTTCTGATACTATATCAG
AGATCCAGTCAAAATGTCATTTGCAATAAGTCAGCCCTCACTCTAATCTA
ATGTCAGAAGACTTTACAATGGGGCCATATTATGACTCTAATTTTCTGCA
CATTAAGAAGCATAGGACGACTGCTGAAATTATTCAGCACAATTAAATAG
TACTATAGGGTTTCAATTGTGATATTTCTCCTATGAAAAGGATTTTCGAT
CTTTGTATTGCGTCAGGTATTGCGTGTCAAAAGCGTTCGAAATGTTCATC
ACCACACTTTACAAATAAGTTAAGATCCATTTTGAGAAACTTCTTTGTCG
CCTAGTATTGATATGATGGGTTTCTTTAAATCAAAAATTCTTCGCGCATT
CTTAGAATGCAATATATTGTCAAGGACAGAAGCCAAAACGATCAATAAGG
TTTTACTTTATCCGTTTTTAAAGATATAAGATTTTGCATTGAAACCTGAC
AACGTACATTAGAGGAAGAAATTTTCACAGCTCAAAATTCGGAAGTTTCG
CGGAATTTGATTTCGCGGTCGAGAGTGCGTTTTGTTCACAATATGAACAA
TTTTGCTCTGAAAAGACTAATTTTTTAAAGGGCAAATATTTGTGTTTCGC
GGGATATAATTTGTCAAAAAACCGCGAAAATTTGTTCCGCGAAAATTTCG
TGTACTTCTCTGATATATAGAAGGGGTTAGGTGCTGGTTATTCAAACTTT
TGTTTTCATTTTACAGGTCCAATCAAGTGATCCCGTTTAACTAGAAAACA
CCTATCAGTGACGATGCTAAATCTGATTGAATCCTTTTATCATCTTGTCA
AAGATCAGGCGTTAAAAATGAAGACATCTATTTTGGAGACGGATTTGGTC
CAAAGGACTTCATCTGAGTTTTTGATTTTTCTAAAACAGCGATACCCCCG
GGTATTACAATAGAATTCCCTCAAGGAATTTCTAAGAGATTTTTATTGTA
ATACCCCCGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAGTCGAAA
ACTTCGATAAGATCGATTATAAGAGGACCCAATTTGGGCAATTTTGGAAT
TTTATAAGTTTTGAATTTTTGGAATCGGTTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014942XLOC_014942Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026576-exon-sc0000575-1575043694:56251..56292TCONS_00026576-exon-sc0000575-1575043694:56251..56292Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:55984..56084TCONS_00026576-exon-sc0000575-1575043694:55984..56084Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:54859..54955TCONS_00026576-exon-sc0000575-1575043694:54859..54955Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:53472..53606TCONS_00026576-exon-sc0000575-1575043694:53472..53606Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:52503..52692TCONS_00026576-exon-sc0000575-1575043694:52503..52692Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:51815..52048TCONS_00026576-exon-sc0000575-1575043694:51815..52048Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:50281..50415TCONS_00026576-exon-sc0000575-1575043694:50281..50415Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:49133..49336TCONS_00026576-exon-sc0000575-1575043694:49133..49336Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:46273..46506TCONS_00026576-exon-sc0000575-1575043694:46273..46506Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1575043694:42061..42426TCONS_00026576-exon-sc0000575-1575043694:42061..42426Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:56251..56292TCONS_00026576-exon-sc0000575-1510915933:56251..56292Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:55984..56084TCONS_00026576-exon-sc0000575-1510915933:55984..56084Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:54859..54955TCONS_00026576-exon-sc0000575-1510915933:54859..54955Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:53472..53606TCONS_00026576-exon-sc0000575-1510915933:53472..53606Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:52503..52692TCONS_00026576-exon-sc0000575-1510915933:52503..52692Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:51815..52048TCONS_00026576-exon-sc0000575-1510915933:51815..52048Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:50281..50415TCONS_00026576-exon-sc0000575-1510915933:50281..50415Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:49133..49336TCONS_00026576-exon-sc0000575-1510915933:49133..49336Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:46273..46506TCONS_00026576-exon-sc0000575-1510915933:46273..46506Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1510915933:42061..42426TCONS_00026576-exon-sc0000575-1510915933:42061..42426Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:56251..56292TCONS_00026576-exon-sc0000575-1491911889:56251..56292Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:55984..56084TCONS_00026576-exon-sc0000575-1491911889:55984..56084Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:54859..54955TCONS_00026576-exon-sc0000575-1491911889:54859..54955Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:53472..53606TCONS_00026576-exon-sc0000575-1491911889:53472..53606Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:52503..52692TCONS_00026576-exon-sc0000575-1491911889:52503..52692Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:51815..52048TCONS_00026576-exon-sc0000575-1491911889:51815..52048Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:50281..50415TCONS_00026576-exon-sc0000575-1491911889:50281..50415Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:49133..49336TCONS_00026576-exon-sc0000575-1491911889:49133..49336Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:46273..46506TCONS_00026576-exon-sc0000575-1491911889:46273..46506Clytia hemisphaericaexon
TCONS_00026576-exon-sc0000575-1491911889:42061..42426TCONS_00026576-exon-sc0000575-1491911889:42061..42426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000575supercontigsc0000575:42061..56292 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.369301	0	0.289741	0	0.0494529	0.225876	0.183544	0.0112226	0	0	0.000881295	0.125768	0.205084	0	0.420756	5.23417	6.51907	0	0	1.34775	1.81019	3.59948	3.21801	1.45669	1.33402	3.62267	5.60908	24.904	23.4186
Blast
[Close]
BLAST of TCONS_00026576 vs. Swiss-Prot (Human)
Match: S22AF (Solute carrier family 22 member 15 OS=Homo sapiens GN=SLC22A15 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 7.365e-41
Identity = 132/418 (31.58%), Postives = 214/418 (51.20%), Query Frame = 3 
Query:   93 VNDTLNYNTPFETIVTEWRLICDESFIPTTIQTTQMVGVLFGSASFGQLGDLIGRKYCXXXXXXXXXXXXXXXXXSYNWYMFICSSXXXXXXXXXXXVVTNIYMLEFIGTKWRTLCATFPA--WGMGVILFGALIKALPNWRHMCYLAAALNVPMVCISLFTPRSPRWLFTNGKAEQGKEALVKLAKQNKNETPDFVLLEKLIDEETRKEKQSGSYTYMSLFKFSSTRKKTLLLSYVWFCCGFSYYGLTLGIGTLSGDMAINYMFMGIGE-----LLITLVVIGSAKLFGRKYGSIILFVXXXXXXXXXXXXXXXXXDETFQSVMNWXXXXXX--XXXXXXWGQVIVYTAEIYPTVIRSVGYGFVSVIARIGGIVAPQNKILFNQSQHLPFTINGXXXXXXXXXXXMLPETMNSPMAD 1319
            ++  +++++ F +I +EW LI + S+  +   +    GV  G  SFGQL D  GRK        L I+  +  G S ++  F  + FL+G+  GG  +V  + + E +GT +  L  +     + +G+  +  L   + +WR +  L       +  +SLF P SPRWL++ G+  + +EAL  +AK+N+     F     L     R  +++GS  ++ LF++      TL+L ++WF C   YYGLTL  G L G +  N    G+ E     L I L+   + K FGRK  ++  F+     +  I +      D    +V+N  +L       ++AA+  V +YT+E+YPTVIR+VG G  S+ +R+GGI+AP    L      LPF + G   L S L+ L+LPET+NSP+ +
Sbjct:   84 IHKHVHFSSSFTSIASEWFLIANRSYKVSAASSFFFSGVFVGVISFGQLSDRFGRKKVYLTGFALDILFAIANGFSPSYEFFAVTRFLVGMMNGGMSLVAFVLLNECVGTAYWALAGSIGGLFFAVGIAQYALLGYFIRSWRTLAILVNLQGTVVFLLSLFIPESPRWLYSQGRLSEAEEALYLIAKRNRKLKCTF----SLTHPANRSCRETGS--FLDLFRYRVLLGHTLILMFIWFVCSLVYYGLTLSAGDLGGSIYANLALSGLIEIPSYPLCIYLI---NQKWFGRKR-TLSAFLCLGGLACLIVMFLPEKKDTGVFAVVNSHSLSLLGKLTISAAFNIVYIYTSELYPTVIRNVGLGTCSMFSRVGGIIAPFIPSLKYVQWSLPFIVFGATGLTSGLLSLLLPETLNSPLLE 491
The following BLAST results are available for this feature:
BLAST of TCONS_00026576 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S22AF7.365e-4131.58Solute carrier family 22 member 15 OS=Homo sapiens... [more]
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