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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026523 ID=TCONS_00026523|Name=TCONS_00026523|organism=Clytia hemisphaerica|type=transcript|length=1403bp
AATTAATAGAACTATTAATAAAATACTAATAAAGAGAGAAGCtaataaaa
acaacattatCTGCGATGGCGACACCAGCATTGGAAAATATCCATATCTC
CAGTAAAGATGATAACGTTACCGCCAATGACAGCAACGAGCCAATCACGA
AGAAGCAACGTCAAAGTGACAAATCACCAAAAACCTCCACATCAACAACT
GAGAGTTCACCTTCATCTGCAAGCAACACCAACAATACTACCTCGAACTC
AACTTCTGAATCATTGGCACAACTTGCTCAAAGTGTCATCGAAGAAATGG
ATATGAAACGCAAGAACGACGAAGCTATGATTTCTGaGTTTCGTAAGATG
ATGGAAATGCAGACAGACACGATGTGTAACACTTTGCAGCAATCCTTCGG
TAAACTTTACCAATCCTCCAACGAGACTTGCCAAGAAAAGCTCCAAAAAC
TTTACAACATCCTCGGAAGGATCAgacTTGCACGGAATGTGATACTCATC
AGTCTTTCGCTAACCGTCGACTTGAcaccttttaaaattttgaaaacgtc
TTTGAATCCTTCCACGTTTGAAATATGGTACGTCACGTCACCCTGGTCAC
GTTATCTCTACTCATCATTGGTGTCGTATCCGCCACGGCTTTCGATACCG
ACACTAATGAAGACGATGCCGGCAGCGAGGACATGGTTAACGAGAAACGA
ACGAGAATGTCTCGACTTTACGACTTTTATCGGAACATGCAACGGAACGG
TGGTCGGGGATACCGATACGGCGATGCATTGCATGATCGATTGTCGAGAG
AACTTTACGGTGACGATGATTTTTCGAACGATTTTGAAGATTACAAGGAA
GAAGAGAGTGATGAAAACAAACTATAGAGAAATCTAACCCTCTAATTTGG
AAATGACGAATTGATACAGCAAATATACTTTTGATAAACAAAAAtgtcta
tattttatgattATGTTATCGATCTAGAttagttttgttttttatatttc
actTGTAAACTAGTAGGCAAGACTGAAAAGACGAGAAATGTGCTTTGTTA
TCGAAAATATCTAACCTGTTCTGTCTACCTTGAAGGGGAGAAATTAGTCG
TGAAAAAGTGAAGAATTTTTTTAGGCAAGTGACAAAGTTTTCTGGCCGAC
TTCAAGGGTGTTGTGACAAAGACTTTCCGCAAAAGTGACAAagTTTTTCA
TATTCTTGTTTTATTCAATGGACAATTCTAGAGAAAGTAGTCCATGGGGG
TGGAGAGTTTTACTCCAGTCATTCGCAGGTTACTAGGGTACTATAATCTC
AATTGTTACCCATTTCTTTTAGGAATAGACCATATTCTAGAGTTTTAAAT
GTTCTAAAGTGGCTGAAATAATAAGCGCTCATCCAAACATTCTGAATAAC
ATC Run BLAST on NCBI protein sequence of TCONS_00026523-protein >TCONS_00026523-protein ID=TCONS_00026523-protein|Name=TCONS_00026523-protein|organism=Clytia hemisphaerica|type=polypeptide|length=273bp
MATPALENIHISSKDDNVTANDSNEPITKKQRQSDKSPKTSTSTTESSPS
SASNTNNTTSNSTSESLAQLAQSVIEEMDMKRKNDEAMISEFRKMMEMQT
DTMCNTLQQSFGKLYQSSNETCQEKLQKLYNILGRIRLARNVILISLSLT
VDLTPFKILKTSLNPSTFEIWYVTSPWSRYLYSSLVSYPPRLSIPTLMKT
MPAARTWLTRNERECLDFTTFIGTCNGTVVGDTDTAMHCMIDCRENFTVT
MIFRTILKITRKKRVMKTNYREI Run BLAST on NCBI transcript from alignment at sc0000574:75236..79505- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026523 ID=TCONS_00026523|Name=TCONS_00026523|organism=Clytia hemisphaerica|type=transcript|length=4270bp|location=Sequence derived from alignment at sc0000574:75236..79505- (Clytia hemisphaerica)
AATTAATAGAACTATTAATAAAATACTAATAAAGAGAGAAGCTAATAAAA
ACAACATTATCTGCGATGGCGACACCAGCATTGGAAAATATCCATATGTA
AGTTTTTACCTTTAAAGTTTTCTTTCCAACAAGAATGCTCTAGGTCCGTC
AAATAAATACTCAATTTCTGATTTGAAGGTTTTATGTTTAAATAAGAGTA
ATATCGTTTGATTACTCATCAATTTTAATTTACAAGCTTTTAACATTGAA
TTAACACGGTTGGTCAAAAAGAGGAAAGGAAAAACATTTTTTTGCTTATA
TCAGCATAAATTACAAAAGGCAGACACTGTCCTACTAATATGAAATATGT
GTCTTATATAAAATGAAAAGATATACAAAATAAAACCTTTAAAGAGAGTT
GAATTGCTAAGAAATTAAAGCATGAGAGCTCTCAAGAAGATGAAATAAGG
AATAAGGAATAAGAACCACCCTGAAAAAATATCTTACTTTATAAAAGGTA
TATCTTCAGGCTGAACTTGGCCAATAAATGATGGAATTTTCGATCTCGGA
CATTCAAGTATCTTTTTGAGGATATCAAACATCTAATACTGTATTCCAAA
TTATATTTTATTTAGAAATTCGCTCAGTTTTCAATGAAACCCTTACTAAA
ATTTTCATTTCTCCATATAGCTCCAGTAAAGATGATAACGTTACCGCCAA
TGACAGCAACGAGCCAATCACGAAGAAGCAACGTCAAAGTGACAAATCAC
CAAAAACCTCCACATCAACAACTGAGAGTTCACCTTCATCTGCAAGCAAC
ACCAACAATACTACCTCGAACTCAACTTCTGAATCATTGGCACAACTTGC
TCAAAGTGTCATCGAAGAAATGGATATGAAACGCAAGAACGACGAAGCTA
TGATTTCTGGTATGTTATGAAGATTTTCTTTTCATTGTAGTTTTATTTTA
AGGGATGATAGAGACTAAGCAAAGACTTGTTGTACTTAATTGGCTGCGAC
AGTATTTAGGCTTTATTCCCTTGGGACCTAATTAACCATTAAAGGATTTC
TTAGGCCCTTTTTCCCAAGTGTTTTTTTCCAATTCGACTAGCCAGTTCAA
ACTTTAAAATTGTTATATCTCCGGATCTAGAAGGGTTCAGAAGCTCATTC
ATAGCTCGCTGGATGGCTTTAAACCTCTTTCTTTTTAACGGCGTCGGAAA
GGATATGGTAGGCGAGGGGTCAAGCCGGAGTTTTTACAAGCTTTTATTTG
ATTTGGTTGGTTGTTAACCAGTAATAAAACAATTTTATTACTTTTTCTAA
AGAATGCGTCATCTCTATTATTTCAAATGAACAATCAGTGAAGTATCTTA
TAAAAACTCTAGCCCATCTCTAGGCGAGGCGAGGGGTCTTATAAAGCATA
CGGCCCCTTTGTACCCACATGAATAAGTTGGTTCTGGTTGATTTCGCACA
ATTTTTTCCTTTCCATTATTTTTTATTGGTTGACCTTGTCAGAGACTCAG
GAATAGAGTTTAAAGAGAATGTATTCTTTTGTTTCTTTCAGAGTTTCGTA
AGATGATGGAAATGCAGACAGACACGATGTGTAACACTTTGCAGCAATCC
TTCGGTAAACTTTACCAATCCTCCAACGAGACTTGCCAAGAAAAGCTCCA
AAAACTTTACAACATCCTCGGAAGGATCAGTAAGTCTAAAAGTTTATGAG
ATCTTTGGCGGAATAATCAGAGTTAGCTTAGAAATACTCTAGGGCACATA
AGGCATAAATTATTTCCATCCTTTTTGCAAACATATTTTTTGGAAGAGAG
GGCTGTCTTATACTAATCAACTCTGTTATCTAAACCCCTGACACATTGTG
ATAAGTCTTTCAAAATAAGTGTCTTTTTATGGTATCGCATTTGAAATAAT
TTTCGTTTTTTTTACACATATGGAATAAACTATTTCCCTCCATTCTGCAC
TGTTCTGCATAATTTTTTTTGGCTTTCAGGAATTTCAGTCATAGTAATAG
ATCTGAAAACGTTAGGTTATAGTCCTACCCTGTCTTAAAATAATCGACTA
TGGTATATAAAACCCCTGACACATTGTGATAAGTCTTTCAACACAGTGAA
TTTTGATGTCTTCGCAACTGAAATACTTTTTCGTTTTGTCTACTATGTCT
AGGTCAGTTAGAACAAGAAATGTTGACTTTCAAGGACGCTTTGAAAATGT
TATATTCCGAAGTTGAAACCTCTAACTGAGACAGGAAAGTGTAAATAGAG
CTAGATTGCAGTTTATTTTCAATGTAGATACGATTCTGAGACATTTTTGT
ATTACCAACAATGACCTTTGGGTTAAGTTATTTTAGTCATTATATTGAAG
CCTGTTATTTTTATTGGCATTAAGCTTGTGCTTTGTGCTTTAGTACATGA
CCAGCAAGAAAGACTTAGGCTTGAGATCTTGAGACCAGATTGGATACGAT
AAAGTAAAGTTCCTTAAGCCTTTTCATATTTCTAGAAATTAGTTTTTCCA
TTAAAGTCGTTTCTGCGAGTCACATTTTCATCTTGTTTTGTTAGATATTT
GTTGAATAGTTTAATTTATTAGGTTTTGAATTGAAAAGATAAAAATAAAG
TTTTCGATATAGGACTTGTTATTTTGTTTTTCAGCGCCGAAAATTTTGTT
TTTCAAAATATCGATTTTAAAATTAAAACAGTTTATTTTTGGGGCTTTCT
TTATTCTCCTTTCGAATATTATTAACTTTTTCTTTTATTTGCTACTATTT
TCCAAGGCACAGCATGAAAGTCAGAAAACCCAAACAAGATAAAAACCAAT
AATTCCTTCCGATTTAAAGCTAGGTGTTACTGAAATTTCTTCGATATGAC
TTTTACCTGGAATTTTCGGCCAGCTTGCGCCAAACTTGGAAAATTCGGAT
AGAAAAATTTAGGTTAAAAGAAAATTTTGAGATGAATAAAAGGAAGGTTC
GTTTTCTTTTTAAAAGATTGATGAAATAAATTATGTATCATCGGCGACCT
TATTAAGTAAAACACAGAATGAAATCAGTTCTTTAATAAAAAATTCCTTT
CTTAATAAATCTCCTTTCGGAAAACTCGAAAAAAAAAACTTTTAAAAGGA
CTTGCACGGAATGTGATACTCATCAGTCTTTCGCTAACCGTCGACTTGAC
ACCTTTTAAAATTTTGAAAACGTCTTTGAATCCTTCCACGTTTGAAATAT
GGTACGTCACGTCACCCTGGTCACGTTATCTCTACTCATCATTGGTGTCG
TATCCGCCACGGCTTTCGATACCGACACTAATGAAGACGATGCCGGCAGC
GAGGACATGGTTAACGAGAAACGAACGAGAATGTCTCGACTTTACGACTT
TTATCGGAACATGCAACGGAACGGTGGTCGGGGATACCGATACGGCGATG
CATTGCATGATCGATTGTCGAGAGAACTTTACGGTGACGATGATTTTTCG
AACGATTTTGAAGATTACAAGGAAGAAGAGAGTGATGAAAACAAACTATA
GAGAAATCTAACCCTCTAATTTGGAAATGACGAATTGATACAGCAAATAT
ACTTTTGATAAACAAAAATGTCTATATTTTATGATTATGTTATCGATCTA
GATTAGTTTTGTTTTTTATATTTCACTTGTAAACTAGTAGGCAAGACTGA
AAAGACGAGAAATGTGCTTTGTTATCGAAAATATCTAACCTGTTCTGTCT
ACCTTGAAGGGGAGAAATTAGTCGTGAAAAAGTGAAGAATTTTTTTAGGC
AAGTGACAAAGTTTTCTGGCCGACTTCAAGGGTGTTGTGACAAAGACTTT
CCGCAAAAGTGACAAAGGTTTTCATATTTTTTTTTTTATTCAATGGACAG
AAAGTAGTCCATGGGGTGGAGAGTTTTACTCCAGTCATTCGCAGGTTACT
AGGAATAGACCATTCTAGAGCTTAAAATGTTCTAAAGTTGCTGAAATAAT
CAGTTCAGATAAGCGCCCATCCAAACATTCTGAATAACATCTCTAACAAA
GCACATCCCTATTCGATTTGCGAGGCATTTTTTTAACATTCGAAAAATCG
NGTGACAAAGTTTTTCATATTCTTGTTTTATTCAATGGACAATTCTAGAG
AAAGTAGTCCATGGGGGTGGAGAGTTTTACTCCAGTCATTCGCAGGTTAC
TAGGGTACTATAATCTCAATTGTTACCCATTTCTTTTAGGAATAGACCAT
ATTCTAGAGTTTTAAATGTTCTAAAGTGGCTGAAATAATAAGCGCTCATC
CAAACATTCTGAATAACATC Coding sequence (CDS) from alignment at sc0000574:75236..79505- >TCONS_00026523 ID=TCONS_00026523|Name=TCONS_00026523|organism=Clytia hemisphaerica|type=CDS|length=3288bp|location=Sequence derived from alignment at sc0000574:75236..79505- (Clytia hemisphaerica)
GACTTGCACGGAATGTGATACTCATCAGTCTTTCGCTAACCGTCGACTTG
ACACCTTTTAAAATTTTGAAAACGTCTTTGAATCCTTCCACGTTTGAAAT
ATGGTACGTCACGTCACCCTGGTCACGTTATCTCTACTCATCATTGGTGT
CGTATCCGCCACGGCTTTCGATACCGACACTAATGAAGACGATGCCGGCA
GCGAGGACATGGTTAACGAGAAACGAACGAGAATGTCTCGACTTTACGAC
TTTTATCGGAACATGCAACGGAACGGTGGTCGGGGATACCGATACGGCGA
TGCATTGCATGATCGATTGTCGAGAGAACTTTACGGTGACGATGATTTTT
CGAACGATTTTGAAGATTACAAGGAAGAAGAGAGTGATGAAAACAAACTA
TAGAGAAATCTAAAGTTTCGTAAGATGATGGAAATGCAGACAGACACGAT
GTGTAACACTTTGCAGCAATCCTTCGGTAAACTTTACCAATCCTCCAACG
AGACTTGCCAAGAAAAGCTCCAAAAACTTTACAACATCCTCGGAAGGATC
ACTCCAGTAAAGATGATAACGTTACCGCCAATGACAGCAACGAGCCAATC
ACGAAGAAGCAACGTCAAAGTGACAAATCACCAAAAACCTCCACATCAAC
AACTGAGAGTTCACCTTCATCTGCAAGCAACACCAACAATACTACCTCGA
ACTCAACTTCTGAATCATTGGCACAACTTGCTCAAAGTGTCATCGAAGAA
ATGGATATGAAACGCAAGAACGACGAAGCTATGATTTCTGATGGCGACAC
CAGCATTGGAAAATATCCATATGACTTGCACGGAATGTGATACTCATCAG
TCTTTCGCTAACCGTCGACTTGACACCTTTTAAAATTTTGAAAACGTCTT
TGAATCCTTCCACGTTTGAAATATGGTACGTCACGTCACCCTGGTCACGT
TATCTCTACTCATCATTGGTGTCGTATCCGCCACGGCTTTCGATACCGAC
ACTAATGAAGACGATGCCGGCAGCGAGGACATGGTTAACGAGAAACGAAC
GAGAATGTCTCGACTTTACGACTTTTATCGGAACATGCAACGGAACGGTG
GTCGGGGATACCGATACGGCGATGCATTGCATGATCGATTGTCGAGAGAA
CTTTACGGTGACGATGATTTTTCGAACGATTTTGAAGATTACAAGGAAGA
AGAGAGTGATGAAAACAAACTATAGAGAAATCTAAAGTTTCGTAAGATGA
TGGAAATGCAGACAGACACGATGTGTAACACTTTGCAGCAATCCTTCGGT
AAACTTTACCAATCCTCCAACGAGACTTGCCAAGAAAAGCTCCAAAAACT
TTACAACATCCTCGGAAGGATCACTCCAGTAAAGATGATAACGTTACCGC
CAATGACAGCAACGAGCCAATCACGAAGAAGCAACGTCAAAGTGACAAAT
CACCAAAAACCTCCACATCAACAACTGAGAGTTCACCTTCATCTGCAAGC
AACACCAACAATACTACCTCGAACTCAACTTCTGAATCATTGGCACAACT
TGCTCAAAGTGTCATCGAAGAAATGGATATGAAACGCAAGAACGACGAAG
CTATGATTTCTGATGGCGACACCAGCATTGGAAAATATCCATATGACTTG
CACGGAATGTGATACTCATCAGTCTTTCGCTAACCGTCGACTTGACACCT
TTTAAAATTTTGAAAACGTCTTTGAATCCTTCCACGTTTGAAATATGGTA
CGTCACGTCACCCTGGTCACGTTATCTCTACTCATCATTGGTGTCGTATC
CGCCACGGCTTTCGATACCGACACTAATGAAGACGATGCCGGCAGCGAGG
ACATGGTTAACGAGAAACGAACGAGAATGTCTCGACTTTACGACTTTTAT
CGGAACATGCAACGGAACGGTGGTCGGGGATACCGATACGGCGATGCATT
GCATGATCGATTGTCGAGAGAACTTTACGGTGACGATGATTTTTCGAACG
ATTTTGAAGATTACAAGGAAGAAGAGAGTGATGAAAACAAACTATAGAGA
AATCTAAAGTTTCGTAAGATGATGGAAATGCAGACAGACACGATGTGTAA
CACTTTGCAGCAATCCTTCGGTAAACTTTACCAATCCTCCAACGAGACTT
GCCAAGAAAAGCTCCAAAAACTTTACAACATCCTCGGAAGGATCACTCCA
GTAAAGATGATAACGTTACCGCCAATGACAGCAACGAGCCAATCACGAAG
AAGCAACGTCAAAGTGACAAATCACCAAAAACCTCCACATCAACAACTGA
GAGTTCACCTTCATCTGCAAGCAACACCAACAATACTACCTCGAACTCAA
CTTCTGAATCATTGGCACAACTTGCTCAAAGTGTCATCGAAGAAATGGAT
ATGAAACGCAAGAACGACGAAGCTATGATTTCTGATGGCGACACCAGCAT
TGGAAAATATCCATATGACTTGCACGGAATGTGATACTCATCAGTCTTTC
GCTAACCGTCGACTTGACACCTTTTAAAATTTTGAAAACGTCTTTGAATC
CTTCCACGTTTGAAATATGGTACGTCACGTCACCCTGGTCACGTTATCTC
TACTCATCATTGGTGTCGTATCCGCCACGGCTTTCGATACCGACACTAAT
GAAGACGATGCCGGCAGCGAGGACATGGTTAACGAGAAACGAACGAGAAT
GTCTCGACTTTACGACTTTTATCGGAACATGCAACGGAACGGTGGTCGGG
GATACCGATACGGCGATGCATTGCATGATCGATTGTCGAGAGAACTTTAC
GGTGACGATGATTTTTCGAACGATTTTGAAGATTACAAGGAAGAAGAGAG
TGATGAAAACAAACTATAGAGAAATCTAAAGTTTCGTAAGATGATGGAAA
TGCAGACAGACACGATGTGTAACACTTTGCAGCAATCCTTCGGTAAACTT
TACCAATCCTCCAACGAGACTTGCCAAGAAAAGCTCCAAAAACTTTACAA
CATCCTCGGAAGGATCACTCCAGTAAAGATGATAACGTTACCGCCAATGA
CAGCAACGAGCCAATCACGAAGAAGCAACGTCAAAGTGACAAATCACCAA
AAACCTCCACATCAACAACTGAGAGTTCACCTTCATCTGCAAGCAACACC
AACAATACTACCTCGAACTCAACTTCTGAATCATTGGCACAACTTGCTCA
AAGTGTCATCGAAGAAATGGATATGAAACGCAAGAACGACGAAGCTATGA
TTTCTGATGGCGACACCAGCATTGGAAAATATCCATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026523-exon-sc0000574-1575043694:79409..79505 | TCONS_00026523-exon-sc0000574-1575043694:79409..79505 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1575043694:78597..78835 | TCONS_00026523-exon-sc0000574-1575043694:78597..78835 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1575043694:77827..77964 | TCONS_00026523-exon-sc0000574-1575043694:77827..77964 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1575043694:75689..76407 | TCONS_00026523-exon-sc0000574-1575043694:75689..76407 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1575043694:75236..75445 | TCONS_00026523-exon-sc0000574-1575043694:75236..75445 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1510915933:79409..79505 | TCONS_00026523-exon-sc0000574-1510915933:79409..79505 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1510915933:78597..78835 | TCONS_00026523-exon-sc0000574-1510915933:78597..78835 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1510915933:77827..77964 | TCONS_00026523-exon-sc0000574-1510915933:77827..77964 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1510915933:75689..76407 | TCONS_00026523-exon-sc0000574-1510915933:75689..76407 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1510915933:75236..75445 | TCONS_00026523-exon-sc0000574-1510915933:75236..75445 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1491911889:79409..79505 | TCONS_00026523-exon-sc0000574-1491911889:79409..79505 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1491911889:78597..78835 | TCONS_00026523-exon-sc0000574-1491911889:78597..78835 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1491911889:77827..77964 | TCONS_00026523-exon-sc0000574-1491911889:77827..77964 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1491911889:75689..76407 | TCONS_00026523-exon-sc0000574-1491911889:75689..76407 | Clytia hemisphaerica | exon |
| TCONS_00026523-exon-sc0000574-1491911889:75236..75445 | TCONS_00026523-exon-sc0000574-1491911889:75236..75445 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000574 | supercontig | sc0000574:75236..79505 - |
Blast
The following BLAST results are available for this feature:
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