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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026484 ID=TCONS_00026484|Name=TCONS_00026484|organism=Clytia hemisphaerica|type=transcript|length=1657bp
CCACGGGCGAGTCAAATATAGGTATCTACTtataaataaagttttaaaga
aagtaATGTTTCCCTTTTTTACATGTCTCAGTACTTTGTctttatttagt
ggaaaatgaCTTTTataggctcactccttttctCTTGGTTTCTCTATTTA
GCAACATGTTGAGGAGAAATGACCATAATCAGATGATGCttgattatcat
tttttatttgaatttgataCATTTACCCATGTCAAGCTCATTATTTATCG
AAGTACACTTTGTAGCGTATTTTATTGCGCTCACTCCTAGTTCTGCTCtt
tgcaaagaaaaagaagacaatgCAGTGTCATTTATGAAGATCAAATAAGC
CGCCACTGAGCAACattcttttctccttttttgcaacattcaaaagaaaa
agaagacattccaaTGTTTATTACGTGATATAAATTTCCCACGCTCTTAG
AAACGTGCTNACCCATGTCAAGCTCATCATTTATCGAAGTACACTTTGTA
GCGTATTTCATTGCGCTCACTCCCAGTTCTGCTCtttgcaaagaaaaaga
aaacaatgcaGTGTCATTTATGAAGATCAAATAAGCCGCCACTGAGCAAC
ACNNNCATATACTTCTAGAACTGGATTGAAACTTATGTCTTTTGACTTAT
GAGACTttaacaggctaaaaagtgccataaatcttacattttattttaag
ttagatgttttacagattttgtcaagaattttcaagaatttgtgaaaatc
acgaaagtttctgccagtgAAAGTCTGCGAgtctgtacgcctaaagtagt
attTGGTTGtcttaaaacaatcaaaaaagcTTATAAAACAGAAAGTTTGC
ATATAAATAACAGTTTGtattaaataagaaaattctACATAGTACCTTTT
CGCAAGTCCCTTACTTTTCGGGTGAAAAATCTTAGGGTTTAATTTAGTGG
AGGAAAAACAATAGCTGATTCACAGAccctatagatatacttcctgtAAG
AAGCTTTTTTCGTTTGAGAATAATAGAAGCCTAGGTCAAAGCTTCGACGG
GAAAAATTGGCTCACCTtagaacattcaaaaaatttttacttttagtaGT
TTTGGAAATAAGTGTTTCTACCCAGAGGGAGAACCACTCATTTCACcgaa
ttttgatgaaattatatAAAAGTGCAAAAAGGTCGTGGGAGGTtaaaaat
ggaatgaaatgCAAGTTTTggttggggataaaaatatcgtGGAAAGCTTC
GTCGGTAGAAGTAAGAACGGGTTGGAATCTCCTAATTACTTACTTCCATA
CGTAACAAAAAGGGTTCTTCAAAAAGCATACGTGAGGGAGGGAGTCAATC
AAGATGTGTATGTATTGcttgcaaattttttaaaactttcttttttcagt
tttttttaaagccttTATATGTATATAGTTAACTTAACTTACACCCGACT
TACACTAGTTTCTTCAAAGTTTCAGCCTAAATATAAACTGGAATAAAGAG
GGCTTTATTAAAGAGAACGTTTTTAAAGTACATATTTATTAAACAGAGGG
GTAAAAGGAAACAGCTAcgtaaaaatatcaacaaaactaattttataagt
ttcgaagtTGCTCGAAATTAATTGATTGACAAGCTCTTGCAACATTTTCT
ACTCTCG Run BLAST on NCBI transcript from alignment at sc0000573:29039..30695 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026484 ID=TCONS_00026484|Name=TCONS_00026484|organism=Clytia hemisphaerica|type=transcript|length=1657bp|location=Sequence derived from alignment at sc0000573:29039..30695 (Clytia hemisphaerica)
CGAGAGTAGAAAATGTTGCAAGAGCTTGTCAATCAATTAATTTCGAGCAa
cttcgaaacttataaaattagttttgttgatatttttacgTAGCTGTTTC
CTTTTACCCCTCTGTTTAATAAATATGTACTTTAAAAACGTTCTCTTTAA
TAAAGCCCTCTTTATTCCAGTTTATATTTAGGCTGAAACTTTGAAGAAAC
TAGTGTAAGTCGGGTGTAAGTTAAGTTAACTATATACATATAaaggcttt
aaaaaaaactgaaaaaagaaagttttaaaaaatttgcaagCAATACATAC
ACATCTTGATTGACTCCCTCCCTCACGTATGCTTTTTGAAGAACCCTTTT
TGTTACGTATGGAAGTAAGTAATTAGGAGATTCCAACCCGTTCTTACTTC
TACCGACGAAGCTTTCCacgatatttttatccccaaccAAAACTTGcatt
tcattccatttttaACCTCCCACGACCTTTTTGCACTTTTatataatttc
atcaaaattcgGTGAAATGAGTGGTTCTCCCTCTGGGTAGAAACACTTAT
TTCCAAAACtactaaaagtaaaaattttttgaatgttctaAGGTGAGCCA
ATTTTTCCCGTCGAAGCTTTGACCTAGGCTTCTATTATTCTCAAACGAAA
AAAGCTTCTTacaggaagtatatctatagggTCTGTGAATCAGCTATTGT
TTTTCCTCCACTAAATTAAACCCTAAGATTTTTCACCCGAAAAGTAAGGG
ACTTGCGAAAAGGTACTATGTagaattttcttatttaataCAAACTGTTA
TTTATATGCAAACTTTCTGTTTTATAAgcttttttgattgttttaagaCA
ACCAaatactactttaggcgtacagacTCGCAGACTTTcactggcagaaa
ctttcgtgattttcacaaattcttgaaaattcttgacaaaatctgtaaaa
catctaacttaaaataaaatgtaagatttatggcactttttagcctgtta
aAGTCTCATAAGTCAAAAGACATAAGTTTCAATCCAGTTCTAGAAGTATA
TGNNNGTGTTGCTCAGTGGCGGCTTATTTGATCTTCATAAATGACACtgc
attgttttctttttctttgcaaaGAGCAGAACTGGGAGTGAGCGCAATGA
AATACGCTACAAAGTGTACTTCGATAAATGATGAGCTTGACATGGGTNAG
CACGTTTCTAAGAGCGTGGGAAATTTATATCACGTAATAAACAttggaat
gtcttctttttcttttgaatgttgcaaaaaaggagaaaagaatGTTGCTC
AGTGGCGGCTTATTTGATCTTCATAAATGACACTGcattgtcttcttttt
ctttgcaaaGAGCAGAACTAGGAGTGAGCGCAATAAAATACGCTACAAAG
TGTACTTCGATAAATAATGAGCTTGACATGGGTAAATGtatcaaattcaa
ataaaaaatgataatcaaGCATCATCTGATTATGGTCATTTCTCCTCAAC
ATGTTGCTAAATAGAGAAACCAAGagaaaaggagtgagcctatAAAAGtc
attttccactaaataaagACAAAGTACTGAGACATGTAAAAAAGGGAAAC
ATtactttctttaaaactttatttataAGTAGATACCTATATTTGACTCG
CCCGTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026484-exon-sc0000573-1491911889:29039..30695 | TCONS_00026484-exon-sc0000573-1491911889:29039..30695 | Clytia hemisphaerica | exon |
| TCONS_00026484-exon-sc0000573-1510915933:29039..30695 | TCONS_00026484-exon-sc0000573-1510915933:29039..30695 | Clytia hemisphaerica | exon |
| TCONS_00026484-exon-sc0000573-1575043694:29039..30695 | TCONS_00026484-exon-sc0000573-1575043694:29039..30695 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000573 | supercontig | sc0000573:29039..30695 . |
Blast
The following BLAST results are available for this feature:
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