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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026463 ID=TCONS_00026463|Name=TCONS_00026463|organism=Clytia hemisphaerica|type=transcript|length=1267bp
ATTTCTTTCAATTACCACCTATTAAACAAAACTCAATATACAAGACAAAA
CTTGACTATGCTTGGGAAGAATTCAGACTTTATGAATTAGATGAAATTGT
GAGACAAAGCGGAGATTCAGAATTTGCTGCATTGCTAAACAGACTTCGAG
AAGGAAATCACACGCAAGCTGATATTGAAAAAATTCAGTCATTTGAACAT
ACTGATACATCTGAATGGCCTGagaatttcatgaaaatgtACATCACAAA
CAACTTGAAAGATCAACAAAATGAAAAGAGCTTAAAATTGTTACAGGATT
GGAATAATAAACGCACTTCAATTGCTAAAGATGAATCGAGACAAAAAGTA
ACTTTAAATAAGTATGTTCCAATTAACAAAACTGCTGGACTCCCAAAAGA
ATTAACATTATGTGTTGGTGCTAGGGTTATGCTTACAATTAACAAAGATG
TAGAGGATAAACTCNTCCAAAAGAATTGACCTTATGTGTTGGTGCTAGGG
TTATGCTTACAATTAACAAAGATGTAGAGGATAAACTCATCAACGGATCC
ACTGGAATAGTGAAACATATCCAAGGCGTAAGAGATAACAAACCATGTGG
CGTTATTTATGTTCAATTTGACAGTTCGTTATCCGGAAATAAATTGAAGA
ATCCAAGATTGAAAGGAGAATTAAAAACGTGTGTTCCAATTCTACCTGAa
gtaaaaacattcaaaacatcGAAGAATATCTATGTGACAAGAAAGCAATT
TCCACTAATCGTTGCTTTTGCTACAACAATACATAAAGCACAAGGTAGCA
CATTAGAATATGCTAGTGGAAATCTTGATCAAACGACTAGAAGCGGAAAA
GGATTAGCACCAGTTGGACCAGGATTACTTTATACACTTCTATCTCGTGC
AACATCCAATGACAAAATTCATTTGCTAAATTTCATTCCTGAGAGGCACA
TTGTGGTAAATTCAGAAGCAAagaaagaaatggaagaaatgAGAACAAAT
AAAGTGTTGTCAATATTACACCCACTTGAACAAATGAAGGATAAAAATAT
GTGTCTGTACAATATTAGATCGTGGAATTTACAtatcaatcattttcttt
caaatgactTGCATACATCTAAATGTTGTTTGTTATGTTTCACAGAGACT
GGTAATAACGCTAGAGGAAACATCGAAGATAATGAAAAATTACAGCATTG
GAAAACGATTCATCAGAGAACAGTCCATGGCTTAGCAATCAGTTACGATA
GAAACCAAGTAAATGTG Run BLAST on NCBI protein sequence of TCONS_00026463-protein >TCONS_00026463-protein ID=TCONS_00026463-protein|Name=TCONS_00026463-protein|organism=Clytia hemisphaerica|type=polypeptide|length=255bp
MLTINKDVEDKLINGSTGIVKHIQGVRDNKPCGVIYVQFDSSLSGNKLKN
PRLKGELKTCVPILPEVKTFKTSKNIYVTRKQFPLIVAFATTIHKAQGST
LEYASGNLDQTTRSGKGLAPVGPGLLYTLLSRATSNDKIHLLNFIPERHI
VVNSEAKKEMEEMRTNKVLSILHPLEQMKDKNMCLYNIRSWNLHINHFLS
NDLHTSKCCLLCFTETGNNARGNIEDNEKLQHWKTIHQRTVHGLAISYDR
NQVNV Run BLAST on NCBI transcript from alignment at sc0000572:146108..147374 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026463 ID=TCONS_00026463|Name=TCONS_00026463|organism=Clytia hemisphaerica|type=transcript|length=1267bp|location=Sequence derived from alignment at sc0000572:146108..147374 (Clytia hemisphaerica)
CACATTTACTTGGTTTCTATCGTAACTGATTGCTAAGCCATGGACTGTTC
TCTGATGAATCGTTTTCCAATGCTGTAATTTTTCATTATCTTCGATGTTT
CCTCTAGCGTTATTACCAGTCTCTGTGAAACATAACAAACAACATTTAGA
TGTATGCAagtcatttgaaagaaaatgattgataTGTAAATTCCACGATC
TAATATTGTACAGACACATATTTTTATCCTTCATTTGTTCAAGTGGGTGT
AATATTGACAACACTTTATTTGTTCTcatttcttccatttctttctTTGC
TTCTGAATTTACCACAATGTGCCTCTCAGGAATGAAATTTAGCAAATGAA
TTTTGTCATTGGATGTTGCACGAGATAGAAGTGTATAAAGTAATCCTGGT
CCAACTGGTGCTAATCCTTTTCCGCTTCTAGTCGTTTGATCAAGATTTCC
ACTAGCATATTCTAATGTGCTACCTTGTGCTTTATGTATTGTTGTAGCAA
AAGCAACGATTAGTGGAAATTGCTTTCTTGTCACATAGATATTCTTCgat
gttttgaatgtttttactTCAGGTAGAATTGGAACACACGTTTTTAATTC
TCCTTTCAATCTTGGATTCTTCAATTTATTTCCGGATAACGAACTGTCAA
ATTGAACATAAATAACGCCACATGGTTTGTTATCTCTTACGCCTTGGATA
TGTTTCACTATTCCAGTGGATCCGTTGATGAGTTTATCCTCTACATCTTT
GTTAATTGTAAGCATAACCCTAGCACCAACACATAAGGTCAATTCTTTTG
GANGAGTTTATCCTCTACATCTTTGTTAATTGTAAGCATAACCCTAGCAC
CAACACATAATGTTAATTCTTTTGGGAGTCCAGCAGTTTTGTTAATTGGA
ACATACTTATTTAAAGTTACTTTTTGTCTCGATTCATCTTTAGCAATTGA
AGTGCGTTTATTATTCCAATCCTGTAACAATTTTAAGCTCTTTTCATTTT
GTTGATCTTTCAAGTTGTTTGTGATGTacattttcatgaaattctCAGGC
CATTCAGATGTATCAGTATGTTCAAATGACTGAATTTTTTCAATATCAGC
TTGCGTGTGATTTCCTTCTCGAAGTCTGTTTAGCAATGCAGCAAATTCTG
AATCTCCGCTTTGTCTCACAATTTCATCTAATTCATAAAGTCTGAATTCT
TCCCAAGCATAGTCAAGTTTTGTCTTGTATATTGAGTTTTGTTTAATAGG
TGGTAATTGAAAGAAAT Coding sequence (CDS) from alignment at sc0000572:146108..147374 >TCONS_00026463 ID=TCONS_00026463|Name=TCONS_00026463|organism=Clytia hemisphaerica|type=CDS|length=765bp|location=Sequence derived from alignment at sc0000572:146108..147374 (Clytia hemisphaerica)
CACATTTACTTGGTTTCTATCGTAACTGATTGCTAAGCCATGGACTGTTC
TCTGATGAATCGTTTTCCAATGCTGTAATTTTTCATTATCTTCGATGTTT
CCTCTAGCGTTATTACCAGTCTCTGTGAAACATAACAAACAACATTTAGA
TGTATGCAagtcatttgaaagaaaatgattgataTGTAAATTCCACGATC
TAATATTGTACAGACACATATTTTTATCCTTCATTTGTTCAAGTGGGTGT
AATATTGACAACACTTTATTTGTTCTcatttcttccatttctttctTTGC
TTCTGAATTTACCACAATGTGCCTCTCAGGAATGAAATTTAGCAAATGAA
TTTTGTCATTGGATGTTGCACGAGATAGAAGTGTATAAAGTAATCCTGGT
CCAACTGGTGCTAATCCTTTTCCGCTTCTAGTCGTTTGATCAAGATTTCC
ACTAGCATATTCTAATGTGCTACCTTGTGCTTTATGTATTGTTGTAGCAA
AAGCAACGATTAGTGGAAATTGCTTTCTTGTCACATAGATATTCTTCgat
gttttgaatgtttttactTCAGGTAGAATTGGAACACACGTTTTTAATTC
TCCTTTCAATCTTGGATTCTTCAATTTATTTCCGGATAACGAACTGTCAA
ATTGAACATAAATAACGCCACATGGTTTGTTATCTCTTACGCCTTGGATA
TGTTTCACTATTCCAGTGGATCCGTTGATGAGTTTATCCTCTACATCTTT
GTTAATTGTAAGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026463-exon-sc0000572-1491911889:146108..147374 | TCONS_00026463-exon-sc0000572-1491911889:146108..147374 | Clytia hemisphaerica | exon |
| TCONS_00026463-exon-sc0000572-1510915933:146108..147374 | TCONS_00026463-exon-sc0000572-1510915933:146108..147374 | Clytia hemisphaerica | exon |
| TCONS_00026463-exon-sc0000572-1575043694:146108..147374 | TCONS_00026463-exon-sc0000572-1575043694:146108..147374 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000572 | supercontig | sc0000572:146108..147374 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR027417 | P-loop_NTPase |
Blast
The following BLAST results are available for this feature:
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