TCONS_00026455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026455
Unique NameTCONS_00026455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026455 ID=TCONS_00026455|Name=TCONS_00026455|organism=Clytia hemisphaerica|type=transcript|length=159bp
GTGGAAATGGTACCTTTGGCAGATGGAGATGAAGGTAATGGAGAAGAGGA
AGAGAATGATCATAGCAACAACTTTTCTCTAAGGTATGTGGAAACCTTCT
ACACCACACCTGACTCTTTTATTAATAGCTTTCGATACAGATATATTTCa
atagtaaaa
Run BLAST on NCBI

transcript from alignment at sc0000572:117292..117450

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026455 ID=TCONS_00026455|Name=TCONS_00026455|organism=Clytia hemisphaerica|type=transcript|length=159bp|location=Sequence derived from alignment at sc0000572:117292..117450 (Clytia hemisphaerica)
ttttactattGAAATATATCTGTATCGAAAGCTATTAATAAAAGAGTCAG
GTGTGGTGTAGAAGGTTTCCACATACCTTAGAGAAAAGTTGTTGCTATGA
TCATTCTCTTCCTCTTCTCCATTACCTTCATCTCCATCTGCCAAAGGTAC
CATTTCCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014861XLOC_014861Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026455-exon-sc0000572-1491911889:117292..117450TCONS_00026455-exon-sc0000572-1491911889:117292..117450Clytia hemisphaericaexon
TCONS_00026455-exon-sc0000572-1510915933:117292..117450TCONS_00026455-exon-sc0000572-1510915933:117292..117450Clytia hemisphaericaexon
TCONS_00026455-exon-sc0000572-1575043694:117292..117450TCONS_00026455-exon-sc0000572-1575043694:117292..117450Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000572supercontigsc0000572:117292..117450 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top