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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026442 ID=TCONS_00026442|Name=TCONS_00026442|organism=Clytia hemisphaerica|type=transcript|length=1521bp
tatatgagattatgagcatgcatacctcgtaatttttttaatcgtagggc
gagcatggttacaatagcatacttctcctgtttctttatacctccatgct
aaGACTTAGTAATGAGGAGCAAGGTAAAACAACACTTTACGACCTAAgca
ttaaagcaaaaaaaagtccGTTACAAGAAATTTCCCAGAAATCTGCCCAG
ATATATTGTCGAACAACCCGTACGATACAATTCCTTAGACATGAAATAAT
TAATTTGGACCCAACTTTTCTGCCCGATAAAAATCAACTTGCTATACGGT
CAATTGCGAACCCTGAAAACAAAACGTTGAAGCGAACCATAGTGTAAAGA
TGGAATACTTGGCTACGGCTAGCTACGATGCGCGAGGTCGTAGGTTCAAT
CCCTGGTCGGCTCATTTGTACTTGACATCTCACTACTTAATGCTCAGAAT
TTAAGAAAGAGATAAAGGGTGAGTGGAGTAgcccagggagaaagagtggc
accttCCTCCACCTTTGGGTCTCATTCGAATGCAGCCATGGTGTATTAAT
CCAAGTGCATATcgtaacaaataaataaatcatattCTTGTAAGAGTAAT
TACCATGATgccacatttttttcaattcaacaaACATTGTGTTGAACTCA
TGCAGGTCATAAAAAATGACCTAGATCTTTATATCATAAAGAATTGTTGA
AAATAAATGACCAGACAACGAAATTAGCGAacgtgagaaaaaaaacatat
tatGTTCAATGTTGGAGGTACCTACTTACCGGTAGAGGGAATACTGACAC
CAAAACATCACCTCAATCAGAACATGACTACCGTGAGAATCACATGTCGA
AATTATATTCCGACCTATGACAGCGAACAtcaattctattcagcgcgcat
tCAACGCTGTGAAAAGTAAGCATGACGAAAATctaagatcttggattaag
tttAAAGTTGATACTTTTACTCACGTCGTGGAAAGCATATCTCAGAAATA
TCATCGACGCTTtaaaaaaagagtcagtgatagagaatgaTAACATAAAG
ATCTGTGCATTATTTTGATTCCATTAAAgtataattaatagtttagtgca
attactgttatacatttggaatGATGTAgaggatttcttttgaaagaaac
acaTTTCAATTAAACTTTGAGGTTTCTGGGGGAATTCGTCAATAGTAAGC
ACGTATACTGATACAATCTGCTAGACATATCGACAATAtctgctcttcat
ctttgattctctctatagtgattagattgacacatccccgataaaatttc
tatacttGGTCGtcctgatactcagggtacattCGGAGAATTGGTGAAAA
ATAggcaaaagttttgaagttcaATATTATCCACACTTCTATGAGGTTTG
TGAGCATTCTTGAGCTCTCCAACTAGCTTAGGTAAGCAAAATAGGCGCAA
TATAgcaaaaaaagcattttttaccCTCTGAAACGTTGAAAATTGCCAAT
AATGACAACGTAATCTTAATC Run BLAST on NCBI transcript from alignment at sc0000571:228283..229803 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026442 ID=TCONS_00026442|Name=TCONS_00026442|organism=Clytia hemisphaerica|type=transcript|length=1521bp|location=Sequence derived from alignment at sc0000571:228283..229803 (Clytia hemisphaerica)
GATTAAGATTACGTTGTCATTATTGGCAATTTTCAACGTTTCAGAGggta
aaaaatgctttttttgcTATATTGCGCCTATTTTGCTTACCTAAGCTAGT
TGGAGAGCTCAAGAATGCTCACAAACCTCATAGAAGTGTGGATAATATtg
aacttcaaaacttttgccTATTTTTCACCAATTCTCCGaatgtaccctga
gtatcaggaCGACCaagtatagaaattttatcggggatgtgtcaatctaa
tcactatagagagaatcaaagatgaagagcagaTATTGTCGATATGTCTA
GCAGATTGTATCAGTATACGTGCTTACTATTGACGAATTCCCCCAGAAAC
CTCAAAGTTTAATTGAAAtgtgtttctttcaaaagaaatcctcTACATCa
ttccaaatgtataacagtaattgcactaaactattaattatacTTTAATG
GAATCAAAATAATGCACAGATCTTTATGTTAtcattctctatcactgact
ctttttttaAAGCGTCGATGATATTTCTGAGATATGCTTTCCACGACGTG
AGTAAAAGTATCAACTTTaaacttaatccaagatcttagATTTTCGTCAT
GCTTACTTTTCACAGCGTTGaatgcgcgctgaatagaattgaTGTTCGCT
GTCATAGGTCGGAATATAATTTCGACATGTGATTCTCACGGTAGTCATGT
TCTGATTGAGGTGATGTTTTGGTGTCAGTATTCCCTCTACCGGTAAGTAG
GTACCTCCAACATTGAACataatatgttttttttctcacgtTCGCTAATT
TCGTTGTCTGGTCATTTATTTTCAACAATTCTTTATGATATAAAGATCTA
GGTCATTTTTTATGACCTGCATGAGTTCAACACAATGTttgttgaattga
aaaaaatgtggcATCATGGTAATTACTCTTACAAGaatatgatttattta
tttgttacgATATGCACTTGGATTAATACACCATGGCTGCATTCGAATGA
GACCCAAAGGTGGAGGaaggtgccactctttctccctgggcTACTCCACT
CACCCTTTATCTCTTTCTTAAATTCTGAGCATTAAGTAGTGAGATGTCAA
GTACAAATGAGCCGACCAGGGATTGAACCTACGACCTCGCGCATCGTAGC
TAGCCGTAGCCAAGTATTCCATCTTTACACTATGGTTCGCTTCAACGTTT
TGTTTTCAGGGTTCGCAATTGACCGTATAGCAAGTTGATTTTTATCGGGC
AGAAAAGTTGGGTCCAAATTAATTATTTCATGTCTAAGGAATTGTATCGT
ACGGGTTGTTCGACAATATATCTGGGCAGATTTCTGGGAAATTTCTTGTA
ACggacttttttttgctttaatgcTTAGGTCGTAAAGTGTTGTTTTACCT
TGCTCCTCATTACTAAGTCttagcatggaggtataaagaaacaggagaag
tatgctattgtaaccatgctcgccctacgattaaaaaaattacgaggtat
gcatgctcataatctcatata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026442-exon-sc0000571-1491911889:228283..229803 | TCONS_00026442-exon-sc0000571-1491911889:228283..229803 | Clytia hemisphaerica | exon |
| TCONS_00026442-exon-sc0000571-1510915933:228283..229803 | TCONS_00026442-exon-sc0000571-1510915933:228283..229803 | Clytia hemisphaerica | exon |
| TCONS_00026442-exon-sc0000571-1575043694:228283..229803 | TCONS_00026442-exon-sc0000571-1575043694:228283..229803 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000571 | supercontig | sc0000571:228283..229803 . |
Blast
The following BLAST results are available for this feature:
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