TCONS_00026436 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026436
Unique NameTCONS_00026436
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1765

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026436 ID=TCONS_00026436|Name=TCONS_00026436|organism=Clytia hemisphaerica|type=transcript|length=1765bp
GCTTCGGCCATCTTTGAGCTTTACTGTTGTTATCTTAATTCGTGTAAAAT
GGTGAATAAAGTTTGACTCTTCAAGTGCAAGAAAATTGAAGCTTTTCTTG
CTTTTAGTAAGTGGAAATGTGATAGCCAAAGAGAGTGATTTTGATTTCTC
ATTCCAAAAATTACTTGCGGAATGGTTGCCatcaaaataattctttattt
ACATCTCGGCCAACCAGCCCAGCATTCATACGCAAAATACATTTTGcttc
aaaacttcaaatcaattcggTTTAGCTTACGAGACAACTCgaatttactt
tcgttttcacatGTAATAAGATTGCGACATGTGGAGCAAGAAGAGTTGTT
TACATATTCGACAAAAGGGATAATAATCAAAAGTAGTAAAAAATTCCTTC
TTATCCCCTAACAACTATCCCAAGCTAGAAGGTTTCTAAgaaagtgaaat
attcaattcaTTAATTGTTTTACAGAGTTTTTATATCACCTAAAAATGGC
AAACAAAAGTCAAGAGGAAGGAAAGTTGTTGGATAGTTTGGAAACCGAAG
GAGATTCTCGAGTAAATTTTCTCAAAGAGGCTCTTCACATTGCAAGAGAA
GCTGGCAGTGTTATTGCTAACGTTTTCCAAGagacaaaacaaaatgttcA
AACAAAAGCCAACTGTGCTGATTTGGTCACCGAGACTGACAAAGCTGTag
aaaaattaatatttgatTATTTGAGAACAAAATTCCCAAGTCACagTTTT
ATAGGTGAGGAGTCAGTATCTGATGGTGCGATGCAATGTCATTTAACAGA
AAATCATACTTGGGTTGTTGACCCAATCGATGGAACTATGAACTTTGTTC
ACATgAATCCAAACGTTGCTGTTTCCATCGGATTAGCCATCAACAAGCAG
ACAGAAGTTGGTGTTGTCTATGCTCCTATGTTGGATCAAATATATTTTGG
TGTGCGTGGACATGGCTCGTTTTTAAATGGAAGACGATTGTCAGTCAGCA
AAAGTATTACAGGTAGGTTTACAAACAANAAATGGAAGACGATTGTCAGT
CAGCAAAAATATTACAGatatatCGCAAGCACTAATTGCAACAGAATTCG
GTTCAAGGAGAGACGAAAGTGTAACAACAGTTTGTGCAAACATTCAGAAC
ATCTTGATGAAGCATAAAGTTGGAGGCATTCGGTGTACAGGATCGGCAGC
TTTGAACATGTGTAGTGTAGCAAGTGGTGCAGTTGATTTGTATTATGAAT
GGGGTCCACAATGTTGGGATGTTTGTGCTTCACATGTTATTGTCCATGAA
GCTGGAGGAGTCACTACTGATGCTCTTGgACAAAATTTCGATATGATGTC
ACGTTCTTACATTTGTGCAAGCAATAAACACCTCATTGAACAGCTTGTTC
CCTCTGTCACGCAGATATCGCTCGCACAATAAACTGTATAAAGAGAATGT
TCGTTAGTAGGTAGTGGGTAGTTTCAAACAAACAACACTTAATTTATATA
TTCATGAACACTAGTTctagttttgaaatttatttataacattttgtgga
ttttaattttcaaattttagaatatATTATTTAGTTTGTATTTACTATTA
TTTAGATTAAGGcactatttttataatttttgaattttaatgaaacaatt
tcTTTTACTTAAAGGAACTTGAATTAAGACAAGTATAAGTTCCTCTTTGT
TTAACTGGAtgcatttttttatcatttatttaaaaaattgaagatgaaaa
ttttaataagaacaa
Run BLAST on NCBI

transcript from alignment at sc0000571:147383..161317-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026436 ID=TCONS_00026436|Name=TCONS_00026436|organism=Clytia hemisphaerica|type=transcript|length=13935bp|location=Sequence derived from alignment at sc0000571:147383..161317- (Clytia hemisphaerica)
GCTTCGGCCATCTTTGAGCTTTACTGTTGTTATCTTAATTCGTGTAAAAT
GGTGAATAAAGTTTGACTCTTCAAGTGCAAGAAAATTGAAGCTTTTCTTG
CTTTTAGTAAGTGGAAATGTGATAGCCAAAGAGAGTGATTTTGATTTCTC
ATTCCAAAAATTACTTGCGGAATGGTTGCCATCAAAATAATTCTTTATTT
ACATCTCGGCCAACCAGCCCAGCATTCATACGCAAAATACATTTTGCTTC
AAAACTTCAAATCAATTCGGTTTAGCTTACGAGACAACTCGAATTTACTT
TCGTTTTCACATGTAATAAGATTGCGACATGTGGAGCAAGAAGAGTTGTT
TACATATTCGACAAAAGGGATAATAATCAAAAGTAGTAAAAAATTCCTTC
TTATCCCCTAACAACTATCCCAAGCTAGAAGGTTTCTAAGAAAGTGAAAT
ATTCAATTCATTAATTGTTTTACAGAGTTTTTATATCACCTAAAAATGGC
AAACAAAAGTCAAGAGGAAGGAAAGTTGTTGGATAGTTTGGAAACCGAAG
GAGATTCTCGAGTAAATTTTCTCAAAGAGGCTCTTCACATTGCAAGAGAA
GCTGGCAGTGTAAGAAATTATCTCTTTGCTTTTTATTCTAGAAACCCATT
TTGGAAATTACTTAAATGCTGTATTTCGTGTGAAGGAATAGAATTTAGTC
GCCCGCTCCTCCCTTTTTTGCGGGGTCTAGCTAGCTAACACTTAGGAACA
ATCGCCTTAGGAGACGCCTCCTGATCAGGAGACATGTAGGTCGCTTGGGG
TCGCTCGATTAGGAGACGCGTCTCCTAATAAGGAGACATAAAACTTTGAT
CTCAATTTTAAGGGCTTTAGGCTTTTCCGTGCATTTTGAAACTAGTTTTA
ATGGAAAGAGCAGTCTCGAATTGGTAAAGTTTTAAAAAAATCATCAAAAT
TTCTCGGTGCAATCGATCACAATCCTAATTAGTCTGGACCCATATACAAA
TTTTTACTCCATTTCACAAAGCTCACGTGAGATAAAAATTAGTAGTATGA
TAGAACTGGAGATTTTGAATTTGCCTCCAGAAAAAAACCGTTTGACAGTT
ACATCAATATGCCTTCTTACCTGTCTTTAAAAATATAAATAAAAGTAATC
ACGGAAAAGGACGCGAAAAAAAAAAGACATAAGCGTGNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATCAAGGTCT
GTTTTATTTACCCCCTGGTGACTTAACAAAAGAGACTTAACTCGATGTTA
CAATCCAATTATTGAAAGTTTGTCTCGGCCTTTTTAAAATGAGCGAGACA
TACGTTCTCTGATTACGCAATTTTCATATTGACATTTTCGAGGCATTTTG
ATGTAACTGTTTGAAAACATGCCAATCAGAATTTTGTCGCATAATTTTTT
TGGGAGAACAATAGACATAATCGGCCAATCAGAAGCGTTTCTACAAAAAA
ATGTAGAAATTTTTGTCCAAAACTACCCGTCTACTATCGAGTTCAGCAAA
AATCGTGAGTAGACGGGGCCCCATCTAAATCCTAATATAAAGCACTACAA
GGAAGCCCCTCTTGATTTTTTTCATGTCCGCCAATTTTCTTTTTGAGACG
CTTTTGTTCAGAAGACAGATTCTTACTTCTGATTGGTTCTTATGGATTAT
TAGAATTGTGATTGATTCCACCGGTGGATTTTTCTGAAAATCACCATATG
GAATCAATTTTTTGTGCTCTTTCCAATGGGAGCAACCAAATTAATTACGT
CTGACATAGAAGGGTAAAAAGTCACAACTTTTCTATCAAAAATGTTGAAA
GAATTGCCTAATCTAGAAAAGTTTATTCATAAAAGCGCTATACAATAAAT
CGATAAAAACGTAAATGCATATAAAATTATTCTTTAGGATGTATTCAAGT
AATGCCATTTCTGAAAAGTTGTATTTGTTTTGCTTCTAGTTGATTATTAA
GTGACAGTCCCATGGTAGCCATAAGCGAAACTTTTTAAGTGCAATGCCCA
AAAATGTCAAAAACTTCAAATTGGCCTAGATCCGCCATTATGGATTTTCA
GACCAAAATATTTTGGGATTTTACTCAGTTCATTGTACTTAACAACATAT
CCAAAAATGAAAAAAATCTAAGTTTGAAACTATTGGACCTGCCCCGCTCT
TAAAAAACCCGGCTCTTAAGGTCTTAAGATACTTATGGGTTTAATTTGTG
GCTGCAGGGTTTTCAGGGTTTTCGATGGGCTTGAAATGTGGCTTCAATCA
AAGCATATATGAAAAAAATCGTCAACTTTGAGCCGCAATCCTAGCCCAAT
GACCCAATAATTTTGGTTCCATTTTTGATATTTTGTGGATAAACCCTTTT
GCTACGAGTTTCATCTGAAAAAAATGAATGATTTTTACTCATTGAACAAA
TTTGTGGCTGCTGTTTTATCAACATAGTGATTTTCTTGATTTGTGCCGCA
ATTTTGGCCGCCATTTTACAAAATCCTTTTTTTCAACCTGCTTCAACCTA
CTTTAGAACCAATACTGTGAAGTTTCGTTGGAAAAGAGTTATTTTTAAAA
AGGATATTCGAATTTCTTTTTTTTTTGCTGTTTTTGAAAACCTCACACAA
TTTTTGAATGCCATCTCATCTATTTGCAACATTTCGTTCTGTTTGACCAG
CATCATTTTCACCACATGAGCATACTCCTTTGTAAATTTGACATGCCATG
TGTGGGTTCTTAATCCTTCAGAAAAAATAAATTTTTGATTTTCTTGGTTT
TCCAAATATTATTGAGACTTGATAACGGCTATTGGTGAGTTGGGGGAATT
AAAAAACACCAAATACTTTTGGGTTTGAGTAATTATAAGTTTAGGGCTAG
CTAGAATCATATGTGTCATCACAAGGGACTTTAAATACAAATAAAATGGA
ACTTTCTAGCAAAACGAACGATAGGGAACGTTCTTGAAAATTTAGGAACG
TTCTTAATACGCTAGAGAACGTTCTTAAACGTTCCTGATCGTTCCCTGTT
ATTTACTAGTTTAGGAGTTACTTAAAACGTTCACGGACATTGCAGAACGT
TCAAGAACCTTCCTGTACGTTCCAAATCGTTCCCAAACGTTCTTATTGAG
TAATCTTATATATTAACTTTTGGACGTGAAGAATCATTCGCGAGCGTTCT
GGAACGCTCTTAAGCATTCTAAAACGTTCTCAAGTATTCTGGAACGTTCC
TGAGCGTCCTGAAACATTCCTGGACGTTCTGGAGCGTTCCAGGAACACTA
TGGACCGTTCGAGAATGCTTGAGACTGCTTGAGAACGTTCCTTTTAATTT
GTACTTCAAATCGATTGTGATGACACATATTACTTATTTTTATCATGCCA
TCTCTATTTATGAAGCTTTGTAACTGTAACTTTGTGTAATGCCAACATAA
CTTGTCTAATTCTGTCATTAGCAACTCTGGTCTACAAAGTAGTTTTCTAG
AGTGATTTTTTTAACAGCTTACTCAGCTACTCAGAAGGTTTTATTTTTAA
ACATTTAAAGACCATATTGATATGACAGAACTAGATTGGATATTTCAGCA
TTACACGAAGTTAAGGTACTTATGATCTTAAAGATTTGTTTTCTAGTGAG
AACATTCAATAAAGGCAGTGAGGCACACTTATGCACTAAACACCTTTGCA
AGGCATGCTTTCCATAGCTTTACATGCATGTCATAAAAAAATCTTGGTAT
TCCAATTTCTTTTAGGTTATTGCTAACGTTTTCCAAGAGACAAAACAAAA
TGTTCAAACAAAAGCCAACTGTGCTGATTTGGTCACCGAGACTGACAAAG
CTGTAGAAAAATTAATATTTGATTATTTGAGAACAAAATTCCCAAGTCAC
AGGTAAAAAATCATTGATGTGTTGTGGCATAAAGACTCAAGAATAAATAA
ATCTGGAATTTACTATCTAAATGGGTGAAAGCTTAGACAAAATTGAAATG
GGATAAAAGGAAATGATAAAAAATCTTTGAAAATAATAGCTTTATAAGGG
AACTGATTTTAGGTGACAATAATTTTTGTAGAACTGATTCCTCCCAATTT
ATAGTGTCAAACAGGAAAATTTTCATTATTAAGAATCCATTTCATCCTCT
TATTCTAGGACTTTGACAAGGATTTCCTAATTTTGCACAGCAAAAATTAA
TTTTTTAAACATTATCCAAGTTTTATGTTAACTACTTTGAAATTATCTTT
TAGTTTTATAGGTGAGGAGTCAGTATCTGATGGTGCGATGCAATGTCATT
TAACAGAAAATCATACTTGGGTTGTTGACCCAATCGATGGAACTATGAAC
TTTGTTCACATGTAAGTATGTATGATTTAATAGTATCTAAAATTAAGATA
AGAACAAGAAAGCTTAAGCGACGTTAAAGCCCAGCAGTCTTGGCAGTGTC
AATATATTTTTCCGTTGCAGACTTACATGGAGCTGATCTCGTTCGTTCGT
TCCTTCGTTCGTTCGTTCGTTCGTTCGTTACCAGCTTTTCTCGAGATTGG
CTCATTAGTTTTTTCTGATTTTTTTGCACAAAGATGCATAACTATAAACC
CTCGAATGTGACAGAGCAAATTTGGGCTAAAAACGGCTAAAAAACAGGTT
TTTTGGACTTTGTGAAAAATTGGATCATTAGCTTTTTCTGATTTTTGTAT
GAAAGTAGGGTACCATCATATAGGTAAAAGATGGCTCAAGCAGATTTTTG
TAAAAAAAAATTTTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCAC
TATCGGAAAGTGTAAAAAACACGTAAAAAAGGGGTATCAAATTTGGTATT
TTTAGACGTTTTTGATATAAAAAAATCTGAAAAATCTACAAAAGCGCCAA
TTTTTATAAAAACTAGTCTTGTTTTAAACAAAAATTACTTTTAAAGGTGT
TTTTATTAATTATTAATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGATTTTCGTATT
TGGGGAAATTCCTTTTTACCATTTTACATTATTCAACACACGAGCTTTAT
TTTTCCATTCTGAATTTTTGTACAATTATTGTCACTGTTTTCTTATTTCC
ATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTACGT
GTTTTTTACACGTTCCGAAAAGTGAATTTTGACTTTAAAAGCTCATAAGT
AGAGAACAAGTTGGTCAAATTTAAAAAGTGATAGCTCAAATTTTAAGTTA
GGATATCTACTTTCTAAATATCAAAACTCCAAGCACTTTGGGACATTTGT
TCGGCCTTAAGATGTCGGGAAAAGTCTGAACTTTTTCGTGGGTCACCCGG
TATAAACCCTCGAATGTGACGGAGCCCAATTTTCGAAAAAAAATGTTTTT
GGGCAAATTTGGGCAAATTTGGGCCAAAAAACGGGCTAAAAAACGGGTTT
TTTGGACTTTAAAAAATTGGATCATTAATTTTTTCTAATTTTTTTGAATG
AAAGTAGGTAAAAGATGGCTCAAGCAGATTTTTGTATAAAACGAATTTTT
CAGCTCAAAAAAAGCATCTTTATATATAAGAATCACTATTGATAAGCATA
CATCAATGTTCTTAGCCAAATTACTCAATATTTTGATGAGATCGATGTTT
TTTTTGCTCACAAAGTCTTGAATATGAAAGAATATTTATAGAGCATGAAA
TTTTGGTTTCTAAACGTTTTTTTATAAGAACCAAACGACTAATTTTAATA
GATCGTCACTATTAGTGTTCTGAATGATTGTTTAATGGTCACGCTCACGT
AGATATCAATTATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGT
ATCACTTGTTTTTTCTTATGCATGCGCACAATAGTAAGTCAGATAATTCA
ATTTTTAGCCTGGACTCGTCAATTAATGATTGCGTGCATAAGCACAGATC
TGTAAAGCCCGAAGGGCTAGATTTGCGGCCTTTATCGAAAAGTGAAGCAA
GTTTTGGTAGGATTTCCTACCAAAGAAATCACGTGACAACAAGCAATTTC
ACTGGTCTGAGAGATGCGAAATAGCGTTTGCCGCCTAATTTTTTTGATCT
CGTGCTCTGAAAACAATTAAAATGCTAGATCTTATCCATCGGCACGAAAT
TTAAAAAGTCAAATTTTTGCTTCACTTTTTTTTGCTGGAGAAAGCTTAAA
GTTGCCTATCTAGCCCTTCGGGCTTTACAGATATCTGTGTGCATGAGCCC
CGACAAAGTCAAATCATTTCGACCAGTTGTGGTTTCAAGACTCATTCCAC
TGCGTGCAAGGCCAATTATATGAGAAAATGCTCTATATGATGTTCTTACA
TTGCAACATTTAGCCAACACAAAAAAACAACTAGAAATTCATAATATTGG
TTTTATATTCATAACATTCTATTAGTGTATTGGTGTGGTGTGTAAATGAA
GTTAGATTAAATCAAGTTGTTTGCTTTAAAGAAAATTGGAAAACAATTAT
CTAATTTCTTTGCAATCCTTAGAAATATTTTTTTAACTAATGCATCTAAT
TTTGAACTTTTAAATTTTTTCAGGAATCCAAACGTTGCTGTTTCCATCGG
ATTAGCCATCAACAAGCAGGTGTGGTTTTGTTATGTAATAGTTATCACAC
GGTACCAAGTACAATATGGGATATATTTTTTGAGTTAAGATTATTCGTCA
TATTCTCAAAGCCTTTAAGGCGAGGAAAATATAGAAAACTCTGAACGAGA
AAAATATATCCTATATTGTACAAGCAAAATTGTGATAACTGGTTTATCAT
CAGCAAACGTTTCTCTCTCCATTTGTGTCTCTCTTTGTTTTGTTTCTTTT
TTCCAATATTTTATTCTTTTACTTTTATTTAGATGAAATCAACATCGAAA
GATTCGAAAAAAGAATCGAATAGTCATCTGTAGTCATTAAAAAGATCAAA
ACATTCTTTTCAGATAAACCCTTTTGATAAGTTGTCTTGGAAGCGAAGAG
AAATGATAAAATTGTACAAAATATGATCCCTCGCTTACCAGACCCCTTTT
TTGAATGTGGTTTTGTATTTGTACGGTATTGGTTTTAGCCAATCAGATTG
TTCATATTTTTCATGTTGATGATAATATTTATTATTATTTTTAATCAGAT
TTATTTATTTTAATTCATTCATTTTCGTTTTTGTAAAACCCCTAAGAAAA
AAATACAGTATAAAAACTCTTTTTATGTTGTATGGGTATTCGAGCCACTG
ACCTTGAGAACAAACAGAAATGATACAGCAACTCAAAATGTAATGAATTT
GCATTCCTGTCAGATATCCTTGGAGCTTGAAAAAGACATGTCGCCCTTTT
TTGTCTTTTGTGACCCCTCCCCTGGCAGTCCCATAGGCTGATATCATGAT
AATATGAAAAGTATGAAATTCCTATCGATTTTAGACAGAAGTTGGTGTTG
TCTATGCTCCTATGTTGGATCAAATATATTTTGGTGTGCGTGGACATGGC
TCGTTTTTAAATGGAAGACGATTGTCAGTCAGCAAAAGTATTACAGGTAG
GTTTACAAACAANAAATGGAAGACGATTGTCAGTCAGCAAAAATATTACA
GGTAGGTTTACAAACAATAGAGCGTTGAAAGTTTTTCTGTCTCAGGCAGA
TTTCCTTCTCAGATAAGTATATAAAGAGGCTTTTCTGTCTCAAAACGCTG
CATAATTTATAAAAATTTCAAAAAGTATGTGCTAATTTGCTGTGTAAAAT
CCATTTTCTATCTTACAGGAAAAAGCTTGCTTCGACCACTGTTACAATAC
TACAGAATTATTGAAATTTTATTAGTTTCAATATTTTTGATTGGAATTCT
TGTTTTTTTTTAGATATATCGCAAGCACTAATTGCAACAGAATTCGGTTC
AAGGAGAGACGAAAGTGTAACAACAGTTTGTGCAAACATTCAGAACATCT
TGATGAAGCATAAAGTTGGAGGGTGAGCTTCATTTTACCCTTTATTTTGA
TTGTCCAACCATGAGGTATATACCGGGTGACCCACGAAAAAGTTCGGACA
GTTTTCGGCGTCTCGAGGCCGAACAAATGTCTCAAAGTGCTTGAAATTTT
AATATGTAGAAAGTAGATATTCTAACTTAAACTTTGAGCTATTACTTTTT
AAATTTGGTTCAGTGGTTCTTCATTTATCAGCTTTTAAAGTTTTCTTTAT
CTTTAACATTGTGTTTTTCGAGTGTGCTGATGTTTTACGACCTCGTTAAT
TAGTGTTGTAGGTAATTAAAGTTTGTAAAATAATAAATTAACAATGAAGT
AGATTTATGTAAATTTATTGTAAATATTTTTATCAAAAATATTTAGCAAG
TAGGCAAAATTTGCCTTCTTTATGAAAATGTCGCGTCTTATGAAAGAACA
GAGAGTGTGGGTTTGCCTGGAATATGCTAGAAAGTGTATGGTGGTGGTTC
TTTTCTGAATGAATAACTGGTTAATAAATTTTGTGAAAGTAAAGAATCTA
AAAAAAGTTTTAAAATTGAATAAAAATATCGAACATGCTCTTTTCTAACG
ATTTAACGACCTTGCTTGATTGATTGATAATAAAACAATTTGATACCTCT
TTTTGGACCTACCTTAAGGTAGTCCTTTAAATTAACCCTTGTCCGTCCGT
CCGTCCGTCCGTTCGTCTGTTGCCAGCTTTTCTCGGGATCGGCTCATTAG
TTTTTTCTATTTTTTTGCACAATGATGCGAAATAGCAACGCCCAAAATGT
GACGGAGCCTGATTTTCGACAAAAAAATTTTTCCGGCCGAAAATGGCGGA
AATATGCCGGAAAACTGGTTTTTCGGCAATTTCTCGAGATTTCATCATTA
GTTTTTTCTGATTTTTTGCTTAAAGATGCGTATTAACAATGCCCAAAACA
TGGCCTAATCCGTTTTTTGAGAAAAAAAATTTTCCGGCCGAAAATGCCGG
AAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGACTTTTCCAA
TATAATTGGTTGTTTTTTCATTCAAAAACATTATTAATAGCAATGCCCAG
CATCAAGCATGTTTCAATTTTCAATAAAATTGATTTTTGAAGCCGGAACT
TTCTAAAAATCGCCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCGGCATTTTCTCG
AGATTTCATCATTAGTTTTTTCTGATTTTTTGCTCAAAGATGCGTATTAA
CAATGCTCAAAACATGGCCGAGTCCAATTTTTGAGAAAAAATTTTTTCGG
GCAAAAAAATACCTTACAATTTTCCTTACAATTGGTTGTTTTTTAATAGC
AACGCCCACCATCAACCATGTTTCAATTTTCAATAAGATTGATTTTACTC
CCTTTCCCTCTTCCCCCATCAACAATCAATGATAAAATTTAATGTTTTAT
GCATTTTCGCAAAACGCTATATCGTCTGTTTCTGACTGATTCTTTTAATT
TTTCTCCTTATTGCCTTATTATTTAGCTTTCATCATCAGGTAGGTCCATT
CAGCATGTTGCTTGTTTGACGTAATTTCGCTCCTTCCGAAAAGTGAATTT
TGACTTTAAAGGCTCATAAGTAGGGAACTTGTGGGTCAAATTTAAAAAGT
AATAGCTCAAACTTTAAGTTAGAATATCTACTTTCTACATATTAAAATTT
CAAGCACTTTGAGACATTTGTTCGGCCTCGAGACGCCGAAAACTGTCCGA
ACTTTTTCGTGGGTCACCCGGTATGGTACATCTATTTCTTTCCAAAATCC
AAAAAATCTTTGACGAAATTCCCAGCCAAAGGACTTGAAGTCCTCGAAAA
CTGAGTCTATTTTTCTTAAATTTTTGTATCTTTAAGCATTCGGTGTACAG
GATCGGCAGCTTTGAACATGTGTAGTGTAGCAAGTGGTGCAGTTGATTTG
TATTATGAATGGGGTCCACAATGTTGGGATGTTTGTGCTTCACATGTTAT
TGTCCATGAAGCTGGAGGAGTCACTACTGATGCTCTTGGTAAGTTATATT
TACTGTCTGTAAAAGTATATACTGTCCATAAGTTGGACCTCTGTTGATTG
AGGTTTGTTTATGCTACGAGGTCTGGTAGCACATAAAAACGTAAGAATAC
TTCAGATGGTGATAAAAGCATGAAATTTGGCACATATGATCCTTAGAGGG
TCTAAAACTTGATTTTTTAAACAGTGACATCAAATTTTGCCACCTGGCCA
CCTGCTAGATAACGTCATCAGGTGGCTGGGCAAAAATATATTTTTTTGAA
AATATTCAAAATCTGATGGTTCCAGCGGAGAGAGCATGAAATGCTGATGA
AAATTGAGGTATAAAGCATGCCTTGAAAATTTTCATATCAAAAGTTATGA
AGGTTGAAAGTTTTGTGATGACGTCATCATAAGCCTTTCCAGGCAAAACC
TAAAAATCCCGTAATAACGGAACTAGTTGACCAAATTTGGTGTTTTATAC
ATCTTTTGTGCTAACAGACCTCACTATAAACCTAACCTCTCCATAGCCTA
AGCTCTCAGTAACTGATCTTTCTGCCCCTTTGGATGGTTCATAAACCCTT
ATAATCAACTCCAACCATTTACATATCATATCATAACATAGTCTACGTCA
TATCTTCCTTCGTTTCGAGCGTAAAACTCCTACTCTTCGGGCTATGAGCA
CTGCTCTTGTTTTGAATATTGAAATTCTCCGGATACATCGCATGCGCACT
GAGGTTTTAATGAAACAATAGAGAGTTTCGAAACCTAAACCAATCAGCTG
CGTTTTAAACATTCTTTTATTTGAAATGTCTATTGATAAACATCTTTTGT
GAAAGTTGTCTATTATGTTTAAACCTATTAATAAGCAATTCCTGGTGGGG
GTTACTAGTGGCCGCATATAGCAGTGCCTATAGACCAAGAGTAAGGCCTA
AAAGCCTGGAGCTGTATATCATGTAGACTAATCATAACGCTCTCAAAGTT
TTGAGCTATAGAGAACGAGAGGAGGTGCAAGCGTTTTGAGCTTGATATTT
GATAATATAATAATAATAACCACTCTATTTCTGCACAATTGATATAGAAT
ACACTTTATTTTATAAGGAAAGCGTTTATAAGGAACTTGAGGCCGAGAAT
GGTCCGAAAAATAAGGAATTTCTAAAGAACTGTCCAGGCTGAGAATAAGA
AAACAAGTTATGAAGCAGTAAGAGTTCAACTTGAACTTGCACACACAAAA
TCCTAAAGAAAAAGTTGATGAAATATAGAATAAACAACGTTCAATAAACG
TCTTTTTCTGTATTCTAGTCAGTTGTTTAACAAAGCATCAAATCAAATTA
ACAGCTAAGTAAATAAAGAACTCGATAAGGAACTTTCAGGCTAGAATCCC
TGGAAAAATGAGGAACTCCAGGCTCGGAGTCAAGTTAAGATTCCTTATAA
GAAAAAAAAACGTGTATAGAAAAATAATAATATACCTAGAGTGGGAAAAT
TAAAAATCAAAAGGAGCATAACTTTTAACAGAATGAGGTTGTTGTGTTTA
TATGCTGCAAATGGCTAAAGGTTTCTTTTAAATAAATTTATATTTTGAGG
AAAATTTTATGAAAATCATTAGAATCACCCATTGCTTTGGCAAGTTCTTA
AGAATACTTCACCCTAAAAAACAAAACTAAACTCACATAAAAAATGTGTA
ACAAATACATCTTTGCTTTATAAAGGATTTGTTAATTTCTTCTTTTAGGA
CAAAATTTCGATATGATGTCACGTTCTTACATTTGTGCAAGCAATAAACA
CCTCATTGAACAGCTTGTTCCCTCTGTCACGCAGATATCGCTCGCACAAT
AAACTGTATAAAGAGAATGTTCGTTAGTAGGTAGTGGGTAGTTTCAAACA
AACAACACTTAATTTATATATTCATGAACACTAGTTCTAGTTTTGAAATT
TATTTATAACATTTTGTGGATTTTAATTTTCAAATTTTAGAATATATTAT
TTAGTTTGTATTTACTATTATTTAGATTAAGGCACTATTTTTATAATTTT
TGAATTTTAATGAAACAATTTCTTTTACTTAAAGGAACTTGAATTAAGAC
AAGTATAAGTTCCTCTTTGTTTAACTGGATGCATTTTTTTATCATTTATT
TAAAAAATTGAAGATGAAAATTTTAATAAGAACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014842XLOC_014842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026436-exon-sc0000571-1575043694:160709..161317TCONS_00026436-exon-sc0000571-1575043694:160709..161317Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:156916..157052TCONS_00026436-exon-sc0000571-1575043694:156916..157052Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:156457..156564TCONS_00026436-exon-sc0000571-1575043694:156457..156564Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:153149..153194TCONS_00026436-exon-sc0000571-1575043694:153149..153194Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:152167..152333TCONS_00026436-exon-sc0000571-1575043694:152167..152333Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:151796..151904TCONS_00026436-exon-sc0000571-1575043694:151796..151904Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:149530..149681TCONS_00026436-exon-sc0000571-1575043694:149530..149681Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1575043694:147383..147819TCONS_00026436-exon-sc0000571-1575043694:147383..147819Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:160709..161317TCONS_00026436-exon-sc0000571-1510915933:160709..161317Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:156916..157052TCONS_00026436-exon-sc0000571-1510915933:156916..157052Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:156457..156564TCONS_00026436-exon-sc0000571-1510915933:156457..156564Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:153149..153194TCONS_00026436-exon-sc0000571-1510915933:153149..153194Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:152167..152333TCONS_00026436-exon-sc0000571-1510915933:152167..152333Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:151796..151904TCONS_00026436-exon-sc0000571-1510915933:151796..151904Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:149530..149681TCONS_00026436-exon-sc0000571-1510915933:149530..149681Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1510915933:147383..147819TCONS_00026436-exon-sc0000571-1510915933:147383..147819Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:160709..161317TCONS_00026436-exon-sc0000571-1491911889:160709..161317Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:156916..157052TCONS_00026436-exon-sc0000571-1491911889:156916..157052Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:156457..156564TCONS_00026436-exon-sc0000571-1491911889:156457..156564Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:153149..153194TCONS_00026436-exon-sc0000571-1491911889:153149..153194Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:152167..152333TCONS_00026436-exon-sc0000571-1491911889:152167..152333Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:151796..151904TCONS_00026436-exon-sc0000571-1491911889:151796..151904Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:149530..149681TCONS_00026436-exon-sc0000571-1491911889:149530..149681Clytia hemisphaericaexon
TCONS_00026436-exon-sc0000571-1491911889:147383..147819TCONS_00026436-exon-sc0000571-1491911889:147383..147819Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000571supercontigsc0000571:147383..161317 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.01561	1.87228	1.14419	2.06837	20.8332	15.3799	9.64858	15.6459	8.86341	11.6279	4.05952	3.56081	2.38727	2.19093	2.93886	4.5273	5.3266	5.58806	3.54952	5.20004	2.28228	3.42499	5.94459	5.48208	1.61981	2.8956	2.87701	4.03123	3.82881	4.47152
Blast
[Close]
BLAST of TCONS_00026436 vs. Swiss-Prot (Human)
Match: IMPA1 (Inositol monophosphatase 1 OS=Homo sapiens GN=IMPA1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 8.630e-61
Identity = 70/141 (49.65%), Postives = 100/141 (70.92%), Query Frame = 1 
Query:  580 ALHIAREAGSVIANVFQETKQNVQTKANCADLVTETDKAVEKLIFDYLRTKFPSHSFIGEESVSDGAMQCHLTENHTWVVDPIDGTMNFVHMNPNVAVSIGLAINKQTEVGVVYAPMLDQIYFGVRGHGSFLNGRRLSVSK 1002
            A+ +AR+AG V+    +  + NV  K++  DLVT TD+ VEK++   ++ K+PSHSFIGEESV+ G  +  LT+N TW++DPIDGT NFVH  P VAVSIG A+NK+ E GVVY+ +  ++Y   +G G+F NG++L VS+
Sbjct:   12 AVTLARQAGEVVCEAIK-NEMNVMLKSSPVDLVTATDQKVEKMLISSIKEKYPSHSFIGEESVAAGE-KSILTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVNKKIEFGVVYSCVEGKMYTARKGKGAFCNGQKLQVSQ 150

HSP 2 Score: 111.694 bits (278), Expect = 8.630e-61
Identity = 61/134 (45.52%), Postives = 84/134 (62.69%), Query Frame = 2 
Query: 1031 NGRRLSVSKNITDISQALIATEFGSRR-DESVTTVCANIQNILMKHKVGGIRCTGSAALNMCSVASGAVDLYYEWGPQCWDVCASHVIVHEAGGVTTDALGQNFDMMSRSYICASNKHLIEQLVPSVTQISLAQ 1429
            NG++L VS+   DI+++L+ TE GS R  E+V  V +N++  L    V GIR  G+AA+NMC VA+G  D YYE G  CWDV  + +IV EAGGV  D  G  FD+MSR  I A+N+ L E++   +  I L +
Sbjct:  142 NGQKLQVSQQ-EDITKSLLVTELGSSRTPETVRMVLSNMEK-LFCIPVHGIRSVGTAAVNMCLVATGGADAYYEMGIHCWDVAGAGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAKEIQVIPLQR 273
The following BLAST results are available for this feature:
BLAST of TCONS_00026436 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMPA18.630e-6149.65Inositol monophosphatase 1 OS=Homo sapiens GN=IMPA... [more]
back to top