TCONS_00026411 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026411
Unique NameTCONS_00026411
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2477

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026411 ID=TCONS_00026411|Name=TCONS_00026411|organism=Clytia hemisphaerica|type=transcript|length=2477bp
cttaacttgttcttaacattttggccatcaaagccttatgttcttatata
gtttgttcttattaaaaaaacgtgtattgtttGAAACcatgtttttaatg
ttttttagaATAAGAATAATAAGCGATCGTGAGCGGAAAACTAAAATCGC
CAAAATGATtgaagaaaataacaacaatacGGAAACCCCAAAGACGGAAG
GCTACAAATCATTAAAATTCAGTGAACAAGAAATTGAAGACCTTGTCAAA
GCTGGTAAAGATTGGCAACATTGCAATGGTTGTTTAATGAGAAATCTTGA
AAACGAATTTGCTGTCAATCATACAGCTTTTGTTTTATTCCCAACAGCGT
TTCCAAGGCAACTGTATGATGAAGCAACTCTggttcaaaaagattttcag
ttaTTGTATTTTAAAGCAAGCAAAGATTATGAATTCATCAAATCGTCTCT
GCAACGCGTAATTATTAAAGATGAATTTACacgaaaattatttgaaattt
acGAAGAAACAAGAAGTGAtttaaaacagAAAATAAGAGTGAACTTGAAT
CGATCAGATTACATGATCAACCAATGCAAATGTgcatccaacattgaaac
caaTGACCAACGAGGAGGCTATCAACTACGTCAAATCGAAATGAATATGA
TTTCAGTTGGAGCATTAGCACTCAGTCCTTTGGTTGGTCAAACGCATCAG
TATCTTGCTGAAGTCATGGGAGAAGATTCACCTTACCAAGCAAACCAGAT
ACCCATTCACCAAACTCATGAAGTATTGGGCGAATCATTAGCTAAAGCTT
TCTATAAATATGGTAACCACAGGGCAATAGTACTGTTTATAATCGAACAC
ACAGATATCAATACTACAGACCAACGTCATCTAGAACATGCTTTTCACAG
AAGCATTCGAAAATCCGGAATCAAACATCGTGTCCCCTGTCTATTTCGAA
ATTTGCAAGAAATATATGAAAAGTCCACTTTGACTGATGATTCGAAGTTA
CTTTTtGAAGGCGAAGAAGTCGCTTTATGTTACCTTCGATCAGGATACAG
TCCAAATCATTACTCAACACAAGAGCGATGGGATGCACGTCTGAGGATTG
AGAAATCGAACGCAATAAAAGTACCAATCATGAGTGACCAGCTTGTAGGT
ACAAAAAAAGTTCAACAGGTATTAGCGGAACCTGGAATGGTTGAAAGATT
TATACACGATAAAAATGCTGTACAAAGAATCAGAAAAACTTTCGCTGGAC
TTTATTCTCTTGACGAGGGTTTAGAAGGTGATCAAATAATCGAAGACGCT
TTAAAAGCACCATCAAATTTTGTACTAAAGCCTCAGCGAGAGGGAGGAGG
TAACAATCTGTACGATCAAGAAATGGTAGATGAACTACGGCGTATCTCTA
ACGATCCTGAAGAGAGAAGTCAATATATTCTCATGGAACGTATTCGGCCA
CCTGTTGTACATAGTTATATCGTGCGCCCTGAATCTCTCAACCCCATGGA
AAGTGAAATCGTATCAGAGTTGGGAATTCTAGGAGTTATAATGAGTGATG
GTGATGATATTATACAAAACGAAAGTTGCGGCCATTTattgaaatcgaaa
gattgGCAACGTGGTGAGGGTGGACTCATCGCTGGTAGAGCTGGCATCGA
TTCGCCTTGTCTCATTTAACCAATAATGATGACGTCTGTATAAGTGAGGC
CCCCATATGATGGCGTGATCTATGAGTTCAAAAATTGTCTTGTTTAACCA
ATGACAGATAccctttttttgttatttttgggTGCTGGATCGACTCGCTT
TGTCTCCTTTAACTAATAATGATGTTTGTTTGATAAGTTTGTGTCCTCGC
CTCACACAATAGCGGCGTTCCTCAGTTAACCGTTTTTTCTGGTTGGGAGG
GTTCTGATTACTGCGGATTACCGATTATTTGAGTCAATTTACGAAATTTA
AGAATTACTGAGATTTTGACATACAAATAAGGCTATTTCCGATACCGAAT
CAATTTTAGGGTTAAAATGGTCGATTTCTACAATACGAAATCTCTTACGC
CCCCCTCCCCACCTGATAGACCATTGACTTCCAAACCCGAAGGAGCTATC
AAGACTGACTATCGTATGGGATGTGATACAAACAATACACACAAAGTCCT
GGCTATATTTTATTAATACAACTCCAAAATTGTAACcttaaatataaata
ttttaaaattctgcattaaaatatttttttaattaattttcttaaaaatt
tcattcatatttttgtatttaaaaattttagtttggataatattattttt
gttgAATATCTTTTTGACACTATTTATATCGATTGTCTATCAATATAATA
GCCTCCAGGGGGAAACCACCCCCCTTTTGAAGGTAGCCTAACCTTGTGAT
GTTTTTATCGCTATTTAATTTGCAGTAATGTTGAGAGTAAAGTGTGGGTA
CAAAGAGTATGCTTTGTTATTCTGGGC
Run BLAST on NCBI

transcript from alignment at sc0000571:41968..53780+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026411 ID=TCONS_00026411|Name=TCONS_00026411|organism=Clytia hemisphaerica|type=transcript|length=11813bp|location=Sequence derived from alignment at sc0000571:41968..53780+ (Clytia hemisphaerica)
cttaacttgttcttaacattttggccatcaaagccttatgttcttatata
gtttgttcttattaaaaaaacgtgtattgtttGAAACcatgtttttaatg
ttttttagaATAAGAATAATAAGCGATCGTGAGCGGAAAACTAAAATCGC
CAAAATGATtgaagaaaataacaacaatacGGAAACCCCAAAGACGGAAG
GCTACAAATCATTAAAATTCAGTGAACAAGAAATTGAAGACCTTGTCAAA
GCTGGTAAAGATTGGCAACATTGCAATGGTTGTTTAATGAGAAATCTTGA
AAACGAATTTGCTGTCAATCATACAGCTTTTGTTTTATTCCCAACAGCGT
TTCCAAGGCAACTGTATGATGAAGCAACTCTggttcaaaaagattttcag
ttaTTGTATTTTAAAGCAAGCAAAGATTATGAATTCATCAAATCGTCTCT
GCAACGGTATGTGTTTGAGGGTGGAGTAGAACATTATTCTGATTAATATC
TTGACATTTTAAAAACtctcaactctctctaatttgaacCTTTGTAATTT
GAGTCTTtaataaaaccttaaaaactCTACAATTGacattctctaattcg
atctttaagggGTCAAGGATTTTTTTTGAGTTCGAATTATGGGAGTATTT
TGACTCTTTAGCTGAGGGGATAAATTTTCCAGCTCGAACTACAGAAGACt
ttgaataatagaggttcgaattagagagagttttACTATAGATTCGCGAT
GCATtattactcgttttcttttttagCGTAATTATTAAAGATGAATTTAC
acgaaaattatttgaaatttacGAAGAAACAAGAAGTGAtttaaaacagg
taaaaaaaatttcgattttataCCATAGAATGtgtactttaatcggatta
attttcgcgagaattTATGATTAATTTTGCTAGCCGAAGAAATCACGAAA
TTGTCAGGTAATATTTTTGTGAATCAGttaaaaatcagttaaaaaTGGGC
CTGGAAAAAGCCAATTTCTGACAATTTGAGGCTTAAAGTACTGAAAAATA
AGAACGGGCGAATCTCAACAAAAGTTTATTGGTTTtgacaaaaaagtgtt
tttatgtttgttattgttgttttagAAAATAAGAGTGAACTTGAATCGAT
CAGATTACATGATCAACCAATGCAAATGTgcatccaacattgaaaccaaT
GACCAACGAGGAGGCTATCAACTACGTCAAATCGAAATGAATATGATTTC
AGTTGGAGCATTAGCACTCAGTCCTTTGGTTGGTCAAACGCATCAGTAAG
TTGTTTTAAAAGCATTTGATGATTCATTGAGGGGTTAGAAAATGTCCTTA
TTTATCATTCTGAATTAtacttttaaaggttttatttttcaataaaagtg
atatcgtttgcttactcatcaatttcaattcacaagctttttcacattgg
attaacacggatgtgaagcaagattggtcagaaaaaagaaaagaaaaaca
tctttttgcttatatcagcataatttaacaaaaggtagacactgtcctga
tatgaaatatgtgtctgatatgaaacgggtcACTTACGTAAAAAAAACTA
GGCTTTGATCTAAATTCAACCTGTATTTAACATTCATGTAAAACATACCT
CAAgcaaaaaatatgacgttttTGTTAAAGATTTAACCATTACTggtaaa
aaagataaaatgctCTAAAGAGGTTGACAAATTCAATGATGATGACTTTG
TTAGGCATATTCTTAATGTTTTTGCTAATTACATTATGAATAtagagtat
attcttataaaaaccgcGTGTATTTACGAAAAGAACATGCCCAGAACATT
CCAGCAAGTAGATCTGgtattttttaatcatatttGGTTTCTAAAATTGT
AACTTGCTGATGTCGGAAACATACGTTCAAATCATACACGGAAGATTTTC
TTTCTGATAAATAAAATCTTTCCATATGAAACTTTATAAATACCACcttc
aaaacattttgattCTGCCAATATTACGGCGAGTTCACAACAGAAGCAGA
CCTGAAAGTCCGTCAATTCTGATTTCGACGATACAAAAAGCGTAGGAATA
CGTTTGTTTTATTTGGAGAAGTTAANAAGCAGACCTGAAAGTCCGTCAAT
TCTGATTTCGACGATACAAAAAGCATAGGAATACGTTTGTTTCCTTTGGA
GAAGTTAAAAGACATGAAAAGTCCGTCTATTTCGATCTTGACGACACAAA
AATGCGACGATTTTAAGGTCTGCTCATATTGCGAGCTAGCCAATATTACT
TATTTTGTTGACACACGGCTTGAAACTTTTATGTTCGAATCTGTATTAGG
TATCTTGCTGAAGTCATGGGAGAAGATTCACCTTACCAAGCAAACCAGGT
TTAAATATATTATTATTAGCCGGCTAACATTCTAAATACTTATGGAAAAG
ATTTTACAGCCTCTTCCCCAGCTGCCACACAACGTTGtgtcaacgttcat
ctaacgttatatggacattTTAAACATtacatgaacgttgaaacaacgtt
atgtgccagcttgGTCCCCTCTACATCTATCAACCTTTAAAGATGCTATT
AGGAGACTAGGCTCGAGCTTAGCCATGTAAGATTGATGTCAACATTCATT
GCATTTGGCATTCTCAAAGAGAATTTAGACATCAATTTATCACTGTTCCC
TTCAAAACCCGCCGCGCTGAATCCCTAAGGCTTGATAGGTGAATTGGGGG
AGTGTGTCCAATGTATTTAtggtctacacgttttttataagaacattcaa
aagccttcggatgttcttaacattctgatttttaagcttaaaaatgttct
taaaatgttcttaattcaCCATCTTTTGCGCATTTTTATccatttcatta
aaaaatggctGTTTTCGAATTTGCAGAGCCAtaaaacgttcttaacttgt
tcttaatattttggcaatcgaagcctatatgttcttgtatagtttattct
ttaaaaaaacgtgtacttttgTTCGGTAATTTTGTTGATTGTGACCCTCG
TGCCCATTACCACGATTTTTAATGAAACCATACTGATTCGCTTTGCTTTT
AATATTTTCAGATACCCATTCACCAAACTCATGAAGTATTGGGCGAATCA
TTAGCTAAAGCTTTCTATAAATATGGTAACCACAGGTTAGTTTTACATGC
TTAAAATAATCAATATCCTCGAGGAATGGTGGGCACTGTTTCTCTTCGcg
aattttagcttttttcgcGAATATTAGTTCCcacgaaaattttgaaaccc
GAATATAAGCAAAATTCCCttcgaaaattaaataaattggGTAAAAAAGG
GGCCTACAAAATTTGGCCCACAGGGTAACTTCAGGTCACACGAAAAATTA
TCATCGCTGCGCAGCTGTAGCAAGGTTTTATTGATGTAATATATTAACGT
TTGTAAAGAAACACcattgtgtcacagacccgctggggccccagccccac
tggaaaattttgtttccagtgggaaaaataccctataatttttaaaaatt
gtactccaaaaccatccctactagattttttaaccttgaaacaatagaat
ttctatcctcattgagatttcaatcgaaatttttatccctgcgctgtagg
aaaaagtttcaccagggctgtgagagacaggggtgtaaagaaTAACTGGT
GTGTACTTGTTTAAGGACTCTGGTCATGGTCATGGTCAAATTTCAgaacc
ttatgttttcgcttctttgacatgtttaagaacaaactgcttttgaaaaa
atgaatttaagtaattacatcatgagtaattaaggaaaaagtgtggcatg
gaccttaataaaacgtcatagCGACGCTATTCGTATACTTTTCACAAgaa
aagcctaatctccttggggaaatcattttattgtttcaaactttatttaa
gttaatgacaaaaaatttctttatttagagtTTTTCGGAAAgattttcta
tttggctacatcccaagttatagctgttttcgtatggaaatttagtggag
aaaattgccgaaaatgagattttttggagattttaaaggaaagacacttc
cacaaaaattttccgaaattatatttttagatactaaatagatacatcac
gaaccaaaaaaaaaatccaaaatgtttgatttttaccgagattagggcat
tgaaaggtgaaatactcttcttcgaaaaactcttcgttttcttcttcatt
ttcttcttcatttaattgtttcatttcaatttttcgatttttaaattcta
aaaaggtaggtttaagaggacatataaaaaaagttatacattaatccttt
ttaaaatgcagaaattgccatttaagttggtgtaaaatcgaaaaattggg
tatgtccagagcccttaaacatTGCTCTTGAGAGAAAAAAGACACAATTA
AAAGTAATAACTCGTTGGAAGGATAATTTTGTGCGTCGtgataaaaaagt
ttgaaaatttgaaaatgaaagagaagaaaataaagaatttttctACTCGA
CCAAAACTCCTGAAACTTTGAACCCCGCAGATTTCAAGTGTTTAcatttt
caatatcattttttatggtcaaaagTTATAGCTCCTTACAATAGGTCCAT
TTCGAGCTTTTTTGTTGCCCAATTTGACCTCTCTAGCATAgtagaaaaag
tcaattttggaTTGATTGGGCTGCCCAATTTTTTTCNACCTCTCTAGCAT
AGTAGATAAAGTCAATTTTGGATTGATTGGACTGCCCAATTTTTTATGGA
ACAGACTTTAAATAAAAGATATTATTTTCGTATTCCTCTAGGGCAATAGT
ACTGTTTATAATCGAACACACAGATATCAATACTACAGACCAACGTCATC
TAGAACATGCTTTTCACAGAAGGTAAGATTCTCAAACTTTTAAACGGACA
TTAAAGGTTAGAGGCCCACTGTGAGCCTAGCTTGTAAATCTGTATAATGT
AATAGGGTCTAAAACTGTAAACGTCATGTAAAAATAGGTAagaaatgttt
gaaattatAGCTATTTTGTTTTGGTTCTCTGTATTGACCTTTAACATCGC
GCTGCACAgtgtttttaataaatttaaGGGTTTAGTCCTTGAAAtaattt
acatattttgagtCGATTGACAACTATGTGTCTTTCAatattatgttttt
atttttctgcttttggaagttttcgaaattttctttgtttgttgAAAATG
AGGAAAGAGGCAGcgttataaaattgttttttctaacCTTGGATTGCATC
ATCGAAAGGAAAACGGAGGCACACTGATGGATCAGTCTATTGTGATCGTT
AAAAATAGTGGGAACGCCTACTTTAAACCTTAACTGAAGGTTTTGTTCAT
AAGTCTTTTGCACTTTTTTTCAGCATTCGAAAATCCGGAATCAAACATCG
TGTCCCCTGTCTATTTCGAAATTTGCAAGAAATATATGAAAAGTCCACTT
TGACTGATGATTCGAAGTTACTTTTGTAAGCACTTTTTTAATATAGATGC
TCCTGTATCACAGACTCGGTGCGACCcccaaccattgagtttcaagcccg
aagggctagaggcgaaactttaacccttctcggGCAAAAGAATTGTAGCC
ACTTacttcccatccaaaacgcctatagaacgcgccgtaatcatgacgac
ggattgtatctagcgatCCCTTTTTGGAGGACTATATACaccttttttaa
atctagcgatagttttagtttcaatccggttTGTGTAAAACCTACgtgcg
ggcgttctggatgggaaataagtggtttcgtTTCCCAtgatccaggagtc
tcgcctctagcccttcgggcttgaaagtTACTGAACccaaccccactgga
aaattatgGCAAAAATTTTGCCCTTGACGGGAAAtaaccctacaatttca
gcccactGGTGAATTGACTTTTTTATTCACTcccaaattcaaattcaatg
aaaaaaatcgCACTCCGAAATCATTCCCAATGGATTTTTTGACCtgagaa
aaatataatttctctCCATTGGAAtatcgatagaaattttcagccTACTT
TATGGGAAGAAGCTCCAAGGGAGAGATGAGATAggggtgttctaataaaa
gCCCTCGCCAAATATATCGTCTCTGATTGGGTAAAAGCTTCACACGCCAC
GCATAGGCGTAGCGatataccctgcaaaatttatggatgagagcggtttt
tacgagactgtaattattgtctttgtgtTTATCAAAAGAtcatgaatatg
tcataaacgtctgcactccctcataaattttgcagggtatctcgctacgc
ctatggcACAGTTACTTTTTACTAATTcgaaaattcttcattttcagtGA
AGGCGAAGAAGTCGCTTTATGTTACCTTCGATCAGGATACAGTCCAAATC
ATTACTCAACACAAGAGGTATTGTTCAAAATAGACTACCTATTGATCTTT
TCACTATCTGACAGACAAAAAACTCATCACACGAAGTTTTTTTTCcagaa
catttaaaaaaaatgaagctttctgatttcttaactttcttaaatttacg
aaaaaattgtttaaaaacttTCAGTTTAAGCGTCGACTATTAAATAGGAA
CTCGTCTTTTTTCGTCTCTGTTGGGAAAAATAACCTACAATTTTATCttc
actgggaaattgactttgatttcatcccatttgaaattcaatggaagaTA
TTTGGATTTTTTGAGCTGGTAACAATAGAGTTTCTCTTCCCATTGGAATT
CCAATGGAAATTTCATCATCACAGTGGGAAAaagtcccggggggggcact
catatggttcGACCCACGGCATGTACCGCCCTTAaaggtaggtttttcga
gaccctaaatgcactgtaagggtgtactttttataaagtgcactacaagg
gtcttcttttagttgaatacactgtaagggtgtgtttggaGATTGCTGAA
TTGCAAGACTGACAGTAAAAATCGGATGTATCTTTACAGTTTTAATTCGg
atccattttgatttgttcttaacattgtGTCGATATCTCAAGGgcatctc
aggctcattttcaggtggcttcggcaaaaaaaaatataaaaccaaACAAC
ACTGTAAGGGTTagaaacgttcggtaaaatgcactgtaagggtacctttt
cactgctcaatggctgtaagggtgcgattttgaaagccattttttggcgg
cacatgtcgtcgtttagaaatcgagtgcccccctccGCCCcagggaaaaa
gttccaccggatTTACGAGACAAGGGATATAttaaaatgtctttgttttt
ctaGCGATGGGATGCACGTCTGAGGATTGAGAAATCGAACGCAATAAAAG
TACCAATCATGAGTGACCAGCTTGTAGGTACAAAAAAAGTTCAACAGGTA
TTAGCGGAACCTGGAATGGTTGAAAGATTTATACACGATAAAAATGCTGT
ACAAAGAATCAGAAAAACTTTCGCTGGACTTTATTCTCTTGACGAGGTAT
GGTATAGTCGTAACTAccacttttctagcggaaaaaaAGACCTCTGATGG
GAAGTCCAAAAATTAGTTATCTAAGTCAACGTAACATTATCCGGGGGTAT
TTTTTCTCTTATTCTATAATCTCTATCCCAAAACGCGTCTGGTACAGGCA
AATTTTATGCAGGCTATCCCGAAACAAATTGCagcaattttttgacaaaa
gtcactcagcgtcatcaaaaattcaTCGGAAAgctcagtcagaagtagac
tctagtctagagTTCTAGAAAAGTGATGTATCCACCGGAGGACGGCCATT
CTCTCTTAcagatttccaatgaaaatgGGGAAGATGTTTATAAAGTTATT
CTGCATACTTTaacggccctttttacgccggcccttattacgccacagcc
tgatTTGGGCTTAcaccaattagggccgtaaataacgccaaaatttgttc
aatttacattaaaatatcatttttcagtagtaaactgttgaaaattccat
tgaaaattactcatttttgcgaagttttagatgtggagtaaaacaatggg
tAACTTTTTATCTTCGAATCATATACCCAAAATTCTTTagagaaaaatgg
tcaaaaattaacgccacttttaagtaaaatctgcaaaattttggcccttt
ttgcaccggcccttttaacgccggcccttattacgccaagagcctaaaaa
taacgccaataagggctgGCGTATAAAGGGTCGATTGATACCAATGACCT
TTAAGGGAATTTCTCATAGATTGAAcatctaaaaaaataataatgatcAG
AAATCGTGGTGAAATTCTCACTAAAGATACCCATAGAGAAAGCATTTCGT
GAAAAATAATTGCAGTGTCTATTAGTGATTCTTACTCCTTCGGGAGTAGA
ACTTCGGGAGTAGAACTTATTCCGAAAGCATACGGAGGGCTCATAACTAT
TTTTTCTTTCGTTCACAGGGTTTAGAAGGTGATCAAATAATCGAAGACGC
TTTAAAAGCACCATCAAATTTTGTACTAAAGCCTCAGCGAGAGGGAGGAG
GTCAGTGCTTGCTTTGGTTGTCTCCTCTGGTTACGACTGCTCTTTATTTA
TTAActtctctttaattcgatctcAAGGGACCATAACtaatttcttcgaa
ttagagaaagattcgaatcatAGAGAGCATTTTACACTATTGACAGATTT
GGAATTTTCTTCTTCTAGAATATTGACTTGGTGAGACGTTTGAAAGCATT
CACTCAGACACTTAGTCGCCAGACAGGACCTTAGTTAAATAAATGTGATG
TTGCTATTGAGGTGTTACTTTCTTTTTAGAGAGTCTTTACACAAGGACTT
TTAGCTATTTAAATTCTATCTGACAAATGAATTTTGGagtatttcatttg
tttttcccCGTATCTAGGTAACAATCTGTACGATCAAGAAATGGTAGATG
AACTACGGCGTATCTCTAACGATCCTGAAGAGAGAAGTCAATATATTCTC
ATGGAACGTATTCGGCCACCTGTTGTACATAGTTATATCGTGCGCCCTGA
ATCTCTCAACCCCATGGAAAGTGAAATCGTATCAGAGTTGGGAATTCTAG
GAGTTATAATGAGGTGAGtgcatcaaaataaaattaactTTGAGCACGTG
ATAAGTCTCCTCCTTTCTCATTATGAAAATTCTGAATATTCAAAAATCCA
AATAATCTTTCTTTTTAACCCTGCCACCTTTCCCAAACTATATATTAACT
ATCTTTAAATCTATTCATCAAAACCGAATCCCTGAAAGGTTTTTCTCCTT
TGGGTTTGTTGAATCAAACTAGCCTGCCAatatacccccttctcacagac
ccgtaACAGatcaaaactcgatggggattgatattccgaTGCCTTTTATG
GCTGGAGATTTGAACTTAATTGTTTTGAGCCAAGAAATTCAGTGgtgatg
gaaaaaatagcattgCAGTGAGAATTTGATTATCTGATTACAAAAATTAG
GGCATACTTTTTCACTGGAACaatattttcaccaattttttcagtgggaa
ggggtcccagtgggtctgtgagaaggggatgtgcCAATACCACTTGGAAG
TGCAAATCTTTTCTTTCAACCATCAAAAGCAAAGGAAATTGAGTGTTTGT
TAAAAAAGACTATTATCTATATATGATAGTGAATGAACTATACTGATGGA
TATGAAACAGGCGTGAGTGCTAACAATTGAGATCAAAGCCCCGAAGCGGC
TAGAgaggaatagaccttttcataaattacatcacgaacatcacttgcct
cgttttgaaattattgccatggtgattaactcccagcggattttattaaa
actacattactattcaaaaaatatcatttaatgtctcaagggccATAATC
aatatggtaattgtttgaatacgaggcaagtaaTGTTCAAGAGTTTCAAC
TCTAGCCAAATCAATGAGTTAACAGATTCATAAAAGGTGGATCCATTGAG
TTtgaaacccgaagggctagagtagaatctttaacctttcgcAGGacaaa
aaagtgaagccacttattcccCATCCAGCACGCGTCTAGAACGCGAGGCA
ATCATGacaacggattgtatctagcagttcctttgtttttgaggattgca
ttttttgaaaactagCCATAGATTttaccagaggaatgtaaagagatgga
aaaacagcttttctgattactcaaagttcaacgatcacctCTAtcgaaaa
ttctattgtaaaaacgttgattaggtcattaaatgaaagtccagaaaaga
cggctcgccatacaaatcggacggtttctacatgatttgacaataaaaaa
gaaaatttgtttttccttttttgccgattactagttcaatttttaagaat
aaggagcaatatttttaccaatgtatagcaaaagaaattcttaacgcaat
gatattaaattggttcttgtaaaactgtccgaagtcgagtaaaatcaaga
tgaagttataattttctcgagctctagctttccatattatggtgcggtca
tgatgcggttatatcagtagaatcgctaggaaattctgtgcaagaagata
taggtaccttttcgtataggagaggtgtacccaaaatataagccctaaaa
gtttgcgcataatcaggcttgaaacaaaaaaaatttatcacaacacgcta
attttttttatagcgacaacaaaagaaacctatttactcgacataaactc
ccttaagggcaagaaacctggtatatgacgagccgtttttccattgtatA
CATAATTCGTTTTCTCTTTTAATCATTATAGTGATGGTGATGATATTATA
CAAAACGAAAGTTGCGGCCATTTattgaaatcgaaagattgGCAACGTGG
TGAGGGTGGACTCATCGCTGGTAGAGCTGGCATCGATTCGCCTTGTCTCA
TTTAACCAATAATGATGACGTCTGTATAAGTGAGGCCCCCATATGATGGC
GTGATCTATGAGTTCAAAAATTGTCTTGTTTAACCAATGACAGATAccct
ttttttgttatttttgggTGCTGGATCGACTCGCTTTGTCTCCTTTAACT
AATAATGATGTTTGTTTGATAAGTTTGTGTCCTCGCCTCACACAATAGCG
GCGTTCCTCAGTTAACCGTTTTTTCTGGTTGGGAGGGTTCTGATTACTGC
GGATTACCGATTATTTGAGTCAATTTACGAAATTTAAGAATTACTGAGAT
TTTGACATACAAATAAGGCTATTTCCGATACCGAATCAATTTTAGGGTTA
AAATGGTCGATTTCTACAATACGAAATCTCTTACGCCCCCCTCCCCACCT
GATAGACCATTGACTTCCAAACCCGAAGGAGCTATCAAGACTGACTATCG
TATGGGATGTGATACAAACAATACACACAAAGTCCTGGCTATATTTTATT
AATACAACTCCAAAATTGTAACcttaaatataaatattttaaaattctgc
attaaaatatttttttaattaattttcttaaaaatttcattcatattttt
gtatttaaaaattttagtttggataatattatttttgttgAATATCTTTT
TGACACTATTTATATCGATTGTCTATCAATATAATAGCCTCCAGGGGGAA
ACCACCCCCCTTTTGAAGGTAGCCTAACCTTGTGATGTTTTTATCGCTAT
TTAATTTGCAGTAATGTTGAGAGTAAAGTGTGGGTACAAAGAGTATGCTT
TGTTATTCTGGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014827XLOC_014827Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026411-exon-sc0000571-1491911889:41968..42423TCONS_00026411-exon-sc0000571-1491911889:41968..42423Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:41968..42423TCONS_00026411-exon-sc0000571-1510915933:41968..42423Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:41968..42423TCONS_00026411-exon-sc0000571-1575043694:41968..42423Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:42744..42816TCONS_00026411-exon-sc0000571-1491911889:42744..42816Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:42744..42816TCONS_00026411-exon-sc0000571-1510915933:42744..42816Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:42744..42816TCONS_00026411-exon-sc0000571-1575043694:42744..42816Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:43093..43262TCONS_00026411-exon-sc0000571-1491911889:43093..43262Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:43093..43262TCONS_00026411-exon-sc0000571-1510915933:43093..43262Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:43093..43262TCONS_00026411-exon-sc0000571-1575043694:43093..43262Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:44317..44365TCONS_00026411-exon-sc0000571-1491911889:44317..44365Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:44317..44365TCONS_00026411-exon-sc0000571-1510915933:44317..44365Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:44317..44365TCONS_00026411-exon-sc0000571-1575043694:44317..44365Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:45079..45152TCONS_00026411-exon-sc0000571-1491911889:45079..45152Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:45079..45152TCONS_00026411-exon-sc0000571-1510915933:45079..45152Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:45079..45152TCONS_00026411-exon-sc0000571-1575043694:45079..45152Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:46809..46889TCONS_00026411-exon-sc0000571-1491911889:46809..46889Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:46809..46889TCONS_00026411-exon-sc0000571-1510915933:46809..46889Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:46809..46889TCONS_00026411-exon-sc0000571-1575043694:46809..46889Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:47391..47492TCONS_00026411-exon-sc0000571-1491911889:47391..47492Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:47391..47492TCONS_00026411-exon-sc0000571-1510915933:47391..47492Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:47391..47492TCONS_00026411-exon-sc0000571-1575043694:47391..47492Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:48365..48434TCONS_00026411-exon-sc0000571-1491911889:48365..48434Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:48365..48434TCONS_00026411-exon-sc0000571-1510915933:48365..48434Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:48365..48434TCONS_00026411-exon-sc0000571-1575043694:48365..48434Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:49322..49513TCONS_00026411-exon-sc0000571-1491911889:49322..49513Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:49322..49513TCONS_00026411-exon-sc0000571-1510915933:49322..49513Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:49322..49513TCONS_00026411-exon-sc0000571-1575043694:49322..49513Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:50486..50567TCONS_00026411-exon-sc0000571-1491911889:50486..50567Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:50486..50567TCONS_00026411-exon-sc0000571-1510915933:50486..50567Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:50486..50567TCONS_00026411-exon-sc0000571-1575043694:50486..50567Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:50935..51130TCONS_00026411-exon-sc0000571-1491911889:50935..51130Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:50935..51130TCONS_00026411-exon-sc0000571-1510915933:50935..51130Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:50935..51130TCONS_00026411-exon-sc0000571-1575043694:50935..51130Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1491911889:52849..53780TCONS_00026411-exon-sc0000571-1491911889:52849..53780Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1510915933:52849..53780TCONS_00026411-exon-sc0000571-1510915933:52849..53780Clytia hemisphaericaexon
TCONS_00026411-exon-sc0000571-1575043694:52849..53780TCONS_00026411-exon-sc0000571-1575043694:52849..53780Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000571supercontigsc0000571:41968..53780 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
19.4005	19.8044	18.3663	18.4775	44.5965	33.207	31.2957	34.6398	10.5378	13.7272	5.43864	4.01515	5.17537	4.79605	3.06144	3.34054	6.13952	3.6717	1.10776	2.04839	5.28918	5.48108	14.9372	11.0178	4.15353	3.61651	0.905663	1.6799	6.66879	7.6219
Blast
[Close]
BLAST of TCONS_00026411 vs. Swiss-Prot (Human)
Match: GSHB (Glutathione synthetase OS=Homo sapiens GN=GSS PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 2.678e-100
Identity = 187/490 (38.16%), Postives = 284/490 (57.96%), Query Frame = 2 
Query:  203 YKSLKFSEQEIEDLVKAGKDWQHCNGCLMRNLENEFA---VNHTAFVLFPTAFPRQLYDEATLVQKDFQLLYFKASKDYEFIKSSLQRVIIKDEFTRKLFEIYEET-RSDLKQKIRVNLNRSDYMINQCKCASNIETNDQRGGYQLRQIEMNMISVGALALSPLVGQTHQYLAEVMGEDSPYQANQIPIHQTHEVLGESLAKAFYKYGNHRAIVLFIIEHTDINTTDQRHLEHAFHRSIRKSGIKHRVPCLFRNLQEIYEKSTLTDDSKLLFEGEEVALCYLRSGYSPNHYSTQERWDARLRIEKSNAIKVPIMSDQLVGTKKVQQVLAEPGMVERFIHDK-NAVQRIRKTFAGLYSLDEGLEGDQIIEDALKAPSNFVLKPQREGGGNNLYDQEMVDELRRISNDPEERSQYILMERIRPPVVHSYIVRPESLNPMESEIVSELGILGVIMSDGDDIIQNESCGHLLKSKDWQRGEGGLIAGRAGIDSP 1657
            + SL   +Q++E+L +   D     G L+R  +   +   V++  F LFP+  P  L ++A  VQ DF LL    S++  F++ +L   I +D+FT +LF+I+++  +  + Q + + LNRSDYM  +             G   L+QIE+N IS     L+      H+++  V+ +    +A +I  +   + L   +AKA+  YG+  A+VL I +  + N  DQR +E+          +   +  + R  ++I EK +L  D +L  +G+E+A+ Y R GY P  YS Q  W+ARL +E+S+A K P ++ QL GTKKVQQ L+ PGM+E  +  +  AV R+R TFAGLYSLD G EGDQ I +AL APS FVLKPQREGGGNNLY +EMV  L+++  D EER+ YILME+I P    + ++RP S   +  + +SELGI GV +     ++ N+  GHLL++K  +  +GG+ AG A +D+P
Sbjct:    5 WGSLLQDKQQLEELARQAVDRALAEGVLLRTSQEPTSSEVVSYAPFTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQNAAFLEQTLSSTIKQDDFTARLFDIHKQVLKEGIAQTVFLGLNRSDYMFQRSA----------DGSPALKQIEINTISASFGGLASRTPAVHRHVLSVLSKTK--EAGKILSNNPSKGLALGIAKAWELYGSPNALVLLIAQEKERNIFDQRAIENEL--------LARNIHVIRRTFEDISEKGSLDQDRRLFVDGQEIAVVYFRDGYMPRQYSLQN-WEARLLLERSHAAKCPDIATQLAGTKKVQQELSRPGMLEMLLPGQPEAVARLRATFAGLYSLDVGEEGDQAIAEALAAPSRFVLKPQREGGGNNLYGEEMVQALKQL-KDSEERASYILMEKIEPEPFENCLLRPGSPARV-VQCISELGIFGVYVRQEKTLVMNKHVGHLLRTKAIEHADGGVAAGVAVLDNP 471
The following BLAST results are available for this feature:
BLAST of TCONS_00026411 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GSHB2.678e-10038.16Glutathione synthetase OS=Homo sapiens GN=GSS PE=1... [more]
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