TCONS_00026273 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026273
Unique NameTCONS_00026273
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2127

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026273 ID=TCONS_00026273|Name=TCONS_00026273|organism=Clytia hemisphaerica|type=transcript|length=2127bp
CgacagaaaatgaagaaaaaaatgaagatgaaaaatcttttgatattGAT
GTTGATGTTAAAGAAAAACagcaagaaattgaaaatgctATTGGAGAAGT
TTTATCCCCAAAAcaaTCAACAATACAACCTTTGGAACTAACAGATAATG
CTGTCATCAAAAGacgaaagaagaaagattttgACTCTAATCGCAATTCT
CGAGCAGATTTGGAGGATTTTTGGAACGAGATCACAACgacagaaaatga
agaaaaaattaaagatgaaaaatcttttgatattGATGTTGATGTCAAAG
AGAAACAACACGAAATTGAGAGTGCTATCGAAGATGCTACCTCACctatg
tttaaaCTCTTTCCTCCATTACTGGACACTGAGAGAGAAGAGACTTTTTA
CCGAGCAGACGTGGATGATGTCGAACAGCAGGCACAAGTTAGTCTTCTTG
ATGTATCTGGGGAAAACTCGATCATTCGacggaaaaagaaaaaagatgcc
AACGAGTCTCAAAGAAATTCTCGAGCCGAAGTAGAGAATTTTTGGAACGA
AATTGCAAATGATGGCAAGCCTACCGTTGACAATGACGCGCCCTCTCAAC
CAAAAGTCATCATTGTGGATTCATTGGATGATAATTCTCTTGGTCTACCA
AGTAGAAGACGACCGTCAGAGTTACGAAATTCGCAAGcagaaattgagaa
attttggACGGAGGCGCGAATCAGAACAGCTGCAGAAAAGTTAGAATCTG
AAGAAACGATGACTGTTGTCAAGCGAAGAGCAAGTGAAGGAGATGTGCTT
CGTGATGATGTTCGAAATTCTCGAGCAGATTTGGAGGATTTTTGGAACGA
AATCACAACaacagaaaatgaagaaaatattgaaaatgaaaaatcttttg
atattgatgttgatgttaaagaaaaacaacagaACGTTGACGTTGAACCA
CCGCAAGATAAAAGTTTATTGGATGTTCCAGTTCGTAGAAGACGGTCGGA
CTTTAGAAACTCTGACGCAGACATTGAGAGATTTTGGACTGAAGCACATA
TCAGAACTGCTGCAGAAAAATTGGCAACTGAAGAAACGGCTGTTATCAAA
AGAAATAAGACGAAGGAAGATGCTGGCGAATCCAAGAATGATCGTGGTAA
AATACGGAACTCGCGGCTTTTGGATGAAGATTTTTGGAGTTCGTTTgact
ttgaaaatattgaagaagcggaaagaaaattcaaagatATTGAAAACGAT
AATAATAAGGTATCACCGAAACAGTCACAAAAGCAAAGTGTTGGGAAACT
GAAAGATGACATTCCCTTGGAAAGCGATGGCGACGGTGAATCATCTCTAG
ACGAATCACCCACAAACTCTTACATGCAACGTTGGGATGACGATGATAAC
AGTCAGATCGATGATAATGATAATGTAAGCGAAATTTCGTCCATTTGCAC
AGATGCTACTGATAGTTTAAAGAGAAGAAAGTCGTTTGAAAACAGAAATT
CGCGAGCTGATTTTGACGACTTTTGGAGTAACATTGGAACAACCTCTGAT
GAGGCGGTATCTTCAACATATAATTCATCAAGTTTCGAAAGCTCTTCAAC
AGCTATTAAcgatgatgaagaagaagaaaatgatgaaaatgaaaaattcg
tTGAAAATGGACAAGAGCTTGTTGAGCAGAAGGATGCTGAACTTAGAGAG
CATGTTGACGATGGACAGATATATATCCCAGATACACCAGAACTTgttga
aaatgaacaaaaagatGTTGAACTTAGAAAGTTTGTTGACGATGGACAGA
TATTTGTTGCAGATACACCAGAACTTTTTAAGAATGAACACAAACTTGTT
GAAAATCAATCGGAAAGTGTTGAAAAGTACAAAATAGTTTTGAGTTCAAA
TGATGAAAGTGACGACGAAGATGAAATAGTTGTTGATGATTTTAGCGTTG
GAAGTGTGGTCGAAAGTGGTGTTCAATTAGTTTTGACCGAACAAAGTTCT
GTTGAGAGTGAAGGGAAATATGCCGATGCTGACCATAGCGGTGTTGAAGA
CAATTTGCAGCAGGAATCTTCAAAGAAGTTTGTTGAAGATGAAatgattg
aaattgaaaatgcaCAAACCAAAATTG
Run BLAST on NCBI

transcript from alignment at sc0000566:113956..129073+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026273 ID=TCONS_00026273|Name=TCONS_00026273|organism=Clytia hemisphaerica|type=transcript|length=15118bp|location=Sequence derived from alignment at sc0000566:113956..129073+ (Clytia hemisphaerica)
CgacagaaaatgaagaaaaaaatgaagatgaaaaatcttttgatattGAT
GTTGATGTTAAAGAAAAACagcaagaaattgaaaatgctATTGGAGAAGT
TTTATCCCCAAAAcaagtaaaaatcattttttttatcagaataatTCTTT
AGAATTATTGTGTCATATTAAAAGCGACTTtaaatacaaataaaatggaa
ctacacgcttttttataagaatacactttataagaatgtatatgataaaa
atggtcaaaaaattaaggATATGCTAAcaataccaccatcatggaatttt
gctactcaagctaagaatgtcatttttagagcattttcaattataaattg
tcaattacccccaagtaaggctcactcctttcacaaaaaatgctatttca
tgcttgagacgtatgtagtAAATATTAAATCTAATCTGagttaggatcct
aacctaagaatgctgtaagaatattttaggatgattttcccaaaaaagtt
aagaatatccatgatgaaatggatttacaccattcttataaaaaagcaag
tACGTTGGAGAAGGTTTccttttttctaaaagtttAGTAATGTATTACAA
CATTCGGAAGCATTTTGGAACGTTCGGAAACCAAGATGCTCTGATCGAGT
AGATCTTTTTAACCTCTGTGCACAAAGGATCGTTTGCAAGCGTTCCAGGG
ACGTTAGGGAACTATACTATTTTTTATCAGATTAGTGTTTCTCCATTTCA
TCATgcatattcttaacttttttggggaaaatcatcctaaaatatattCT
CACGGTACTCTTAACAGGACCCAAATTCAACCTAAATTTAACATGTAATG
CATACacgaagcaaaaaaatgtttttttattgaaagattTGATCCTTACT
ATTACTGGAGGGATAATGGGAAATGAACAGTCAAAAATGTTCTACATATC
GTATTCTTAGGTCCAGTTGCCGatttccatgatggtgatattcttagcag
attcttaatttttttggttaATTTCATCatgatttttcttataaaaaaat
ggtGTAAAGAAGAATGTTCAGGGACGTCACAATGTTCTTCCATGCCATTT
ATATCTCAAATTGCTTGTGGTGATACTAAAACTAAGCCTAACTCAAAAAC
AATGGCAAAAAAGATGCAGAATAAAGCTTGGCTAAGGACTTGATTAAATT
TGAGCAAATTAAACAATAAGAAgtacgaagcaaaaaaaaatacccCATCG
AggtttatgaaaaaaatgttttatcgcATTTCAGTCAACAATACAACCTT
TGGAACTAACAGATGATGCTGTCATCAAAAGacgaaagaagaaagatttt
gACTCTAATCGCAATGTAAGTTTTGAGTTTTTCGAACTTTCTTTTTAATA
TCAGTGTTCGCCATCATATTCAAAAAGACCTTTAAGCctggaaattcaaa
aacaaatcttttaaatcaatcaatatcATCATACACTGAAAGTTTTAGCG
GTTCATTTTAGTACCTTTAGAGGTTCTAATGATCGCGTTTACCTTTAGAT
AACAAATTTGTCCCTTTTCGGGAATAGATATATTCCTTTAAGGATTAAAA
TGATACCTTCTGTGGTACGATTTTTAAAAACACCGTTAAGGTAATTTTAA
AACACCCCGTAGGAATTATTTTGTACCTTTTGAGTGATTTTcgggatttc
caaaaattcgaaagttaNCGCGCTTTGTCTGTCAATCTGACAGGTCGAAG
CTCTCAGTCGCAAATTAGTTAAAGTCCGAATTTTAGTCGCTCGCTAGATT
CTTTATTAACTATTATTTTGCGATGCTGAAGAAATCCAAACAACTTTTGG
GATTGGTCAACTTTCTCCCAAATGTTCCTGCTGCAGAAGATCAACATTCG
GTTCAAAAGCATATTGCAACTCTCAAATCACAAACCTATTGCTCTAAGCA
AAAAGAACGACTCGTTTGGAGCTTATNATAGGGGCAGGAAAAAAGCCTTC
GAAAGAATTCTGAAGATCCCTTCAACGCTAAAGGGATCATTATGTACCTC
TTAGGTATCTCATAAACAATAAAGTATAATAAAATTTATTCATTCGACGG
TATAAAGTAGAGTGTCAAGATTCTCATTCACTCAGTAGAAAGACCTTGGG
ATGTCGTTTGAAAAAACTTAAGATTGAAAGGCAAGACCTTGAGGAGTCTA
GCTTGGCATGAACGAGCACGCAAGACAGGTCATGATGAAAGGTCTTTAAT
TGAACATTTTATGCTCTGTGTTAGGGAACTGTTATAATCCAAGACTCTGA
AAGTTATTATTCTAACCGTATTTCCGCTTGAAACCCTTTAAAGCTCANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTATCCTGCA
CGATCGACGAGCAAAACTGATCAAGGATCACATATCCGTCAAAATTCTGA
TTGAAATATACCCAAACCTTGCAAATGGTGAACAGGTATTGAATTAACTA
ACGGGGGGGTCCTACAGTCCGGTAGTTggcaaaaaatcgaaaagttaATA
TCCGGAGGGGGGCGTATAGGATCCTTGGAATATAATTGAAAGTAAGAATA
TAATGAATATGAACAAAAGCTTAAAAATATAACTTTGTTTTTCAACAGAT
CGATATGCTGTTGTTGGAGTAATGACCTTACCGACATTGTTTCGAGAAGA
TCCAAAACACTACTACGGAATTGATAACACCCTAACTCCTCGAATCAGTC
ATGCTAACCCTGACATTTTCGACGAACAAGAATTTTTCATCCACCTCGAT
GGCATCACTATTGGAAAGTCGAGAGATCCTTTGACGGCACTGACATTGAT
GTACAGTTGCTACTACGTGTTCAACTTAGTATACCCAAAGGAGTTGCAAA
GTTCCTTGGAATTTATCCAGCGTTTCTTGGTAAAAATCGGAGATGGTAGC
AAGCCATCAGGCAAATTAATTACAGcaatcacaaaaataaaaaaatatgc
tgGTTGAAGTTCAACCAATgtatctttttatctttttgacATTAGCAGTG
ATCAGTTTTGGCGATGGCTTGCTTCCGTCGCCGGTTTTAACCACGAAACT
CAAATGAATAAATGAGTCCGTGCAGacattttgatatttgaaaatttaca
aagTTACGCTTCAACTTCTTTTCTTTGAgtttgaatattgaatattgaaA
GCACTATATTTTCTTGTCAATGTTTTTTTGCCAAATGAAAATTAGAAACG
CTAAAACTGCACTCCTTGaggtttttgtttaaaatgctCCTAGTTGTAAT
TTTTGGGATTTGTTGAATTTAATTGCCCTATGAAATAGTTTTATACAGAA
AAAATCTGCTTTTAGATTGAATAATCTTACTGAATAGTAAATAGTGTATA
GTTATTACGTAATATAGAATCGGTTTTTGTCAAACCTTGTCAATATTTAT
TGAATTATTTAACTTTCTTCTATGTAAAATTCAAtctgcaaaaataaaaa
taggagCTTTGATCTCCCaaatcaactttttgagtttttccttCGATAAT
TATTCGCTTATATTCTAGTGAAGAAATGATAGGAAATCTAAAATACCTAG
GGGGTAAAAGGAATACCTTTTTCGCACCATCACATCTAAGTNGATAGGAG
CTTTGATCTCCCAAAtccactttttgagtttttccttCGATAATTATTCG
CTTATATTCTAGTGAAGAAATGATAGGAAATTTAAAATACCTAGGGGGTA
AAAGGAAATACCTTTTTCGCACTATCACATCTAAGTGATAAAAAACAACC
CCGAgggtaaaaactaaaaataactTTCGGCACTTTTGAATCCTTTTGGT
GGTGTTTTTAAAGCACGTTAATGGTATATCAGACTAATTTTACCCTAAAA
GGAGCGTTTTGCGGTATCGTTTGAAAACTACCTTTTTAGTGACTTAAATA
TACCTTTTTAGTGACTTAAATATACCTTTTGGAGGACTTAAAAATTCTTT
TGGAAGTATTATTTTCATGCCTCAAAAGGTACCTAAAAGTACCTTGAAGG
TacgaatgaaaaaaataccttacaggtttttttttaatttgtacctTTAA
AGGGTCGTTTTGCGGTATCGCTAAAATAAACCTTTAAAGGTACTAAAATG
AACCGCTAAAACTTTCAGTGTATNTATACctggaaattcaaaaacaaatc
ttttaaatcaatcaatatcATCATATAGTTCGGTGATTGTCCATTGGACG
AAATCACACAATCAACAAAAGATATGGAAATGAGGCTTCAACAAAATGAA
AGCGAGGCAGCTAAAGAAGTAGATATATCTTATGATTCACAAAATAGGAT
TTTTATGGATTATTTCGTTCTACGTTTTATAAAAGACCTTACCAAAAGGG
CATGAAAACTTCATGTTTCTTGTATTTTCAGTCTCGAGCAGATTTGGAGG
ATTTTTGGAACGAAATCACAACGACAAAAAGCGAAGAAaatattgaagat
gaaaaatcttttaatatTGATGTTGATGTCAAAGAAAAACAACACGAAAT
TGAAAGTGCTATTGAAGAGGTCCTATCACCAAAACAGGCAAGTGATTCTT
CTTTTAAACAGAAACTTGATTATTAAGGCGATTGGCAatgaaaatagcaa
aaaataagACCAGTTCCCGGCGTAATTTTGAAGGGAATGAGTAGCAAGAA
CAGCAAAACTGAATATGAAGAGATAAGTACTCTCaatatttaatttgatt
ttatttcttcaaaatttccagTCAACAATACAAACTTTGGAAATAACAGA
CGATGCTGTGATCAAAAGacgaaagaagaaagattttgACTCTAATCGGA
ATGTAAGTTTGGAGTTTTTCGAACTTTCTTTTTAATATCAGTGTTCACCA
TCATATTCAAAAAGACCTTTAAGCCTggaaattcaaaagaaaaatacttt
taaatcaatcaatatcATCATATAGTTCGGTGATTGTCCATTGGACGAAA
ACCCACAATCAACAAAAGATATGGATAGGAGGCTACAACAAAATGAAAGC
GAGGCAGCTAAAGAAGTAGATATATCTTATGATtcacaaaataagatttt
tatgGATTATTTTGTTCTACGCTTTATAAAAGACCTTCCCAAAGtgcatg
aaaatttcatgtttcttgtATTTTCAGTCTCGAGCAGATTTGGAGGATTT
TTGGAACGAAATCACAACGacagaaagtgaagaaaatattaaagatGAAA
AATCTTTTGCTATTGATGTTGATGTCAAAGAAAAACAACGCGAAATTGAA
AGTGCTATTGAAGGTGTTATTGAAAGTGTTTTATCACCTAAACAGGCAAG
TGATTCTTCTTTTAAACAGAAACTTAATTATTAGACACAAAAAATAAGAC
TGCCCTGCAATAGAGTGATTCTAAAGGAAACTAGTAAAGTAAgcatattc
atctggtggctgtcggtaGAGCTGGGAGTGTCTTAGCGAGTACCTcacgg
gatttttcatctcgtttcttagtgagttccactttgaagattttcgaaaa
ttagaagcctttcaagtgctttgacgcaagttcgattttttcactactgc
aggagcttcgaaatttaaaagtgacgtaaaaaaatcgaatgtttagagcc
cgaaaacccgggctcaaaacattcgaaaaagtcgcaaagtggaatagacg
ttaattgcgtaaaaaaaacgcgggtgacgtctagtataggctaggaGTGT
CTATCCCATTTTATATTTGCGCTGTACCTGGGATATAGAATGCTGAATTG
GAGTGTCACACCTCTCAGCTCCCTGGTCATCGATCCAACCCACAATCCTT
AGATTGTAAAGCGAacgctctaccgactgagctacccggcaaTCGATGAG
TagcaaaaacagaaaaactaAATATAAAAGGATTAGTATCTCAATAgtta
atttgattttctttctttaaaatttccaGTCAACAATACAACCTTTGGAA
CTAACAGATAATGCTGTCATCAAAAGacgaaagaagaaagattttgACTC
TAATCGCAATGTAAGTTTTGAGTTTACTTTGCTTTTTAACTTCAATTcca
gaaattttttgaaggaattttgaAGTTGTTCAATTTTCAGCTAACGAATT
TTCATTGTCATAAAGAACACCAACTCGaatctgaaaaattaaactaattG
TATTGTATATCATATAGTTCGGTGATTGTCCACTGGACGAAAtcacaaaa
tcaacaaaagacATCGACACAAGGCTAGTGCAGCATGAAAGCGAGGCAGC
TATAGAAGTAGATAATATTTACGATTATCAGTTCTGGACAAAGGAAGTCT
TTCTGTTGTTGCAACCATTTAACTCTAATTTCCATTTTAAATTGAGTACG
AAAGATCtttcaaaaatacatgaaaatttcatgtttcttgtATTTTCAGT
CTCGAGCAGATTTGGAGGATTTTTGGAACGAGATCACAACgacagaaaat
gaagaaaaaattaaagatgaaaaatcttttgatattGATGTTGATGTCAA
AGAGAAACAACACGAAATTGAGAGTGCTATCGAAGATGCTACCTCACcta
tgtttaaagtttgttGTTTCTTGAGTTTTCTTCCTGGATGGGTACTAAAG
TTGGGGAATATCgggtactcttgtctcccgaatagacgtccccccgctaa
tctacattacagtgtagatagaccttaaacttgttaaaattttccttttt
gttagtattggttcttattttacgtgttcatttgtgaAAGTTTATTTTTA
GTTGTTGATGCTTatttggaccccccccccccccccccctNAAAGCTTGG
CTAAGGACTTGcttaaatttgagcaaattAAACAATAGGAAGTACaaagc
aaacaaaaaaataccTCATCGAggtttatgaaaaaaatgttttcacatTT
CAGTCAACAATAAAACCTTTGGAACTAACAGACGATGCTGTCATCAAAAG
acgaaagaagaaagattttgACTCTAATCGCAATGTAAGTTTTGagtttt
ctaaactttctttttAATATCAGTGTTCACCATCCTGTTCAAAAAGACCT
TTATACctggaaattcaaaaacaaatcttttaaatcaatcaatatcATCA
TATAGTTCGGTGATTGTCCATTGGACGAAATCACACAATCAACAAAAGAT
ATGGAAATGAGGCTTCAACAAAATGAAAGCGAGGCAGCTAAAGAAGTAGA
TATATCTTATGATtcacaaaataagatttttatgGATTATTTCGTTCTAC
GTTTTATAAAAGACCTTCCCAAAGGGCCCGAAAACTTCACGTTTCTTGTA
TTTTCAGTCTCGAGCAGATTTAGAGGATTTTTGGAACGAAATCACAACGA
CAAAAAGCGAAGAAaatattgaagatgaaaaatcttTTGCTATTGATGTT
GATGTCAAAGAAAAACAACACCAAATTGAAAGTGCTATTGAAGGTGTTTT
ATCAACAAAACAGGTAAGTAATTCTTCTTTTAAACAGAAACTTGATTATT
AAGGCGTTTGACAatgaaaatggcaaaaagaCCATAAGACCAGTTCCCGG
CGTAATTTTGAAGGGAATGAGTAGCAAGAACAGTAAAACTGAATATAAAG
Ggataagtgcactttatagttaatttgattttctttcttaaaaatttcca
gTCAACAATACAACCTTTGGAAATAAAAGATGATGCTGTCATCAAAAGac
gaaagaagaaagattttaACTCCAATCGCAATGTAAGATTTGAGTTTACT
TtgctttttaatttcaattccagaaattttttgaaggaattttgaAGTTG
TTCAATTTTCAGCTAAGGAATTTTCATTGTCATAAAGAACACACCAACTC
GaatctgaaaaattaaactaatgCGACTAAATGTTTGCGAAAAATTTACC
CTAACAGAGACAAAATCGACAAAAaattgacccttagagagacagtTTTT
GAGTCTGCACATACCCGATACCTATTTTTATACACCCCTCCTCACCTGGT
ATTTCTTCCAAATTCTtcgttagtttttttttatattgatattATAAAAT
TGAACTAAAAGGCAAATAACTTGTAAACTAGCACTCTTTCTTCCCACAGG
TTAACCTACTGGTATacgtaccttttttcctggtaATAAATAGCCAATCA
GAGTGGAGTACGGTAGTCCTCTTTGCTTTTCCTATTTCTTTTGGCTGTCT
CGCGAAATTATTTTCAGTCACAAAAATATTATGCTAAAATGATCTCATCA
TTGTAcgatttttaccattttacgaGCTTTTGAATTATTTCTCTCTTGTA
ACAGCTCTTTCCTCCATTACTGGACACTGAGAGAGAAGAGACTTTTTACC
GAGCAGACGTGGATGATGTCGAACAGCAGGTAAGCTTTCTCTTAATTATA
CCGAAAATGGGCAAAGGAAATTGAAAGTTATTccaaaatcgggaaatcgg
gttTTCCATCTACTTTGACAGATTATGTATAAATTTTTTCGATTCGAAGC
CCTTTAATTTACTTCATATAATCCTATAAATTCAAGTAGGGTCGTTTTCT
TCAGGTGTTTAAAAAATCACTACCCCAAGATCTTGCAAACTTAAAGTAAT
GTGTCTCTCATATTAGATAATACGGTAGATCAACTATAAAATggattttt
cctcttttttttaagttaagtaacttccgccattatggaagcaagcGTTG
GAAACTTTAGAGGCGATtgcttacgcaaatcgaacgtttgcttccataat
ggtggaattTACGTAACAGATGAAAACCTCTGTAACAGCGTCCCAACAAT
ACCAAAAAAGACAATTTCTACCGGCAACCACATTTTGTTCTTTAGGCACA
AGTTAGTCTTCTTGATGTATCTGGGGAAAACTCGATCATTCGacggaaaa
agaaaaaagatgccAACGAGTCTCAAAGAAATGTAAGTACATTATATATA
Atattatcggccaaaacttagttggccctaagtgactaaattttggtttg
gtgactaaaattagggccgactaaaaatttgggccgtctaaaatttgggc
cgtctaaaatttgggccaaattaaaagtttataactaagctttccttatt
ttccagAATTTTAAGCTTTCTGCTATTAtccatctgcttgtaaatttaga
aattgcccaaatttttagtcggtcttaattattagtcggcccttagtcac
taaattttgacgaggtgacttaAATGACCACACTCCCGGGGGGacactcg
atttcgaaacaaCGGtctgtgccgcgcaaaatctgccaTTCAAAATCGCA
TATTTTGAGATGCtaaaaaaacctacccttaagcgcggcacatgaccaga
tcatatgagtgccccccagACCACACTGTAACTGGGGAGACTGCCGTTAT
TATCATTTCTCTAACAGCGATCTTTTTGTCCACTCATCttctaaaattga
aactttgataCTTTAAGTCTCGAGCCGAAGTAGAGAATTTTTGGAACGAA
ATTGCAAATGATGGCAAGCCTACCGTTGACAATGACGCGCCCTCTCAACC
AAAAGTCATCATTGTGGATTCATTGGATGATAATTCTCTTGGTCTACCAA
GTAGAAGACGACCGTCAGAGTTACGAAATGTGAGTTTTTTACACATTGAT
GTTTCATATTTTGGAAGACTGGAGTTATTTTTAATCCCTGTATTACAGTA
ATAAGGTAGTTACATGATGCTATACTAATACTATACAAATCTCTATatct
caaatgtctccttaagtAAATGGTACACGTTTAATGGCCCCCTTCAGATA
ACAATGCTTTATAAGCTTTTCTCCATAACATTTATTTTCTATACCTGGAA
TAAATTTATGTACCCCTtgcatgttcgagttatagagactccactcaTAC
TGTAGTTTATgtcgtcatttttggaatttccttTTCAGTCGCAAGcagaa
attgagaaattttggACGGAGGCGCGAATCAGAACAGCTGCAGAAAAGTT
AGAATCTGAAGAAACGATGACTGTTGTCAAGCGAAGAGCAAGTGAAGGAG
ATGTGCTTCGTGATGATGTTCGAAATGTatgtaaaatcgaaaattgtCAG
GGGGTTAAAAATATACTATCATAGAACATCCCTTGTTCGAAATTCCGAGG
GGGGTAGGAATTTACTACCATTGGCTCCTGGTTATTCGAAGTTCTGAAGG
GGGCTACGAATTTACAGCAatagactcccggttattcgaagttCAGAGGG
GCTAGAAATTCCGGACCGTAGGCTCCAGTTAATTCAAAGTTCTGAGGGGG
TTAACATATACTACCATTAGAACTTCGTTATTCGATGACTCGAAGGAGAT
ATGATTTTACTTCGAATCACAGAGGAAGGTTTACCTACAAATTAGACTGC
TTTGAGAATGTTATCAGAATGTGTCCTATGCAATATTTGTTCTTCATGAC
GGAAGATTTTGTTTCCTTTCAACAAAGTCCCAACTCGAAAGTCGAAATAA
CCAAGGGATtttttgtctgatttttaaGTAAAGCAGATCCAAAAAGCCTT
GTTGCTCACATATGTAAGGTTTGAATAACCGGTATCTTCTTGAACTGCCT
TTTAATTATTTAGCATTTTCTGACTTGCAATGTGATGAAGTGGAAGTTTC
CATTCTCAACACATTTAAGGGAAAATCCTGAATAGAATCTCTAGATTACA
GAAGTTGTGTTATAAATTACCTTCGTTTTCAGTCTCGAGCAGATTTGGAG
GATTTTTGGAACGAAATCACAACaacagaaaatgaagaaaatattgaaaa
tgaaaaatcttttgatattgatgttgatgttaaagaaaaacaacagaACG
TTGACGTTGAACCACCGCAAGATAAAAGTTTATTGGATGTTCCAGTTCGT
AGAAGACGGTCGGACTTTAGAAACGTAAGACAGGAACATTGTTTTGAGTC
AGTCCTCATTTATCTGGTAATCATCCTTATAAATAATATGTCTATATGTA
AAGCCATGATCGTagaaatctcgaaaaatgaCTTTAGAGACTTTTTCTTA
AAGATGTTTTCTTCCTTTAACagaattttgaaatcttttgacttTTAGAT
GGACTCTTAAGATGTTTGAAAACCGAGTCCTATTTATTGGCGTCTTTTAC
CAAAACCCGGTTCTACTTGCTCATCTTAAAATAAAGGCCGGTTTctactt
gcgcgcgctgcgatcgttctttttggcttcaatccatggcgttctaaatc
caAGGCCTAGCAAACGTGATCTGAGGTCAAAATTTAGATTTAGAACGCAA
TGCTTCAATCCtatttgcttggaaaaaatattacgtcataaaaaatctaa
cgtgcgctcgaaaaaaagattgaacacatttcaacttttttaaaccaTTA
CATCAGATCGCACCAATAGAGTTGCTTCATTTTCCTTTTGACCAATAGCT
TGGAAGCTTTCCTCGAAAAactgcgatcgaagcgcgcgcaagtggagacc
gactTTTTCAAATTGACGACAAAAAATAAACAGTGGAATCTTTAGTAATG
AAACCTAAGTAATTTATACAATTTATCCCCTCTGGTTCAGGATTTTGAGT
AAACATTTAGGATTAGCACCTTTAGCCTTAGTGCCTTACTAGattcataa
tttttgcatacaatccACTCACTCTAATTCAAACCTCTATTATGtaaatt
tttctgtaattcgaacttaaaaaaattttccgccccttgaaaatcgaatt
aaagtAAGTCAAATATAATCAATGTCTTTATTTAGTCTGACGCAGACATT
GAGAGATTTTGGACTGAAGCACATATCAGAACTGCTGCAGAAAAATTGGC
AACTGAAGAAACGGCTGTTATCAAAAGAAATAAGACGAAGGAAGATGCTG
GCGAATCCAAGAATGATCGTGGTAAAATACGGAACGTAAGTGAACTAGAT
TTTCTGTATAAAGAATGACTGTTTTCGTAGAAAAGTGGGACATTGGTATA
ACATGTTTTGATCGAGTGTTCGACCGTTGTTTGTTTATAATTGATATTGA
ATTTTTGTAGAATTCTTGCAtcctttacatgttttttaaggGGGAAAAAG
CACAAATCTATGCAGATTTTCCTTTCGAGAAGGAcgttgaaaaatttatt
ttttctcatcATCTAATTGAGTTGGGAATTAAAGAACTCTTTTTCATTGT
TATTGTCGTTTTAAAACTTATAATCTCAATTCGCAACAGAGTGCTCAACC
ATAAACATTTGATTACTGGGCGTGGCATAGATATATATCATGTACTCAAA
ACaagaatcctatgaaatagactCAAATATTTCAATAAGTAGACTGAGCC
ATTCAAAAGTAGTTCaatatttcctttttctttttctcacaGTCGCGGCT
TTTGGATGAAGATTTTTGGAGTTCGTTTgactttgaaaatattgaagaag
cggaaagaaaattcaaagatATTGAAAACGATAATAATAAGGTAACTTAT
TTATGTTAAGCTTCTTTTGTTCTACTCTGTCCCAAAGTGGGATCAATGGG
TGGGTTGCCAATCTCTCCCTCTGGGACGTTGATAAATCAAACATTCATCT
TCTTGTTGCAGGTATCACCGAAACAGTCACAAAAGCAAAGTGTTGGGAAA
CTGAAAGATGACATTCCCTTGGAAAGCGATGGCGACGGTGAATCATCTCT
AGACGAATCACCCACAAACTCTTACATGCAACGTTGGGATGACGATGATA
ACAGTCAGGCAAGTGAAGAAAATGTTCACATTTATTTCAAAGAAGATATT
CCGTCGTTTTGCaaaagattcccatttccgcactaagattcctttgccac
ttttctagcggaaaacGACCATAACTTCATCAACAACTCAATCAggttta
tattttcaaattttccaaaccAGGCTCAAAAGATGAGCCTTGAAACAAAC
TAACTGAAAATTGTATGGTATGCAGGGTTTCGATGGCCAGATTACGAGAT
GTTCAGAtattcgatggccaaaatattaagaacaagttaagaacatttta
aggcttaatgGACTCTAGAACGCtgaattttatagaaaaatggacaaaaa
tactcaaaaaatggcaaaaataagaacatgttaagaaaatttttaggctt
gaaactcaaaaagttaagaacatcccttcaaggcttcaaaaaatttggat
gtttttatgaaaaaaaacgcaaaaaaagtttcaaagtaTCATTGTACAGT
TTGTGGTTTTTTTATGCTTTTTTCTCCTTACAGATCGATGATAATGATAA
TGTAAGCGAAATTTCGTCCATTTGCACAGATGCTACTGATAGTTTAAAGA
GAAGAAAGTCGTTTGAAAACAGAAATGTATGTGTtatgttttttaatatt
ttatttttgactattatagaaaacacccctgtctcacagcccggtgtaat
ttttttcttcagtggggataaaatccctatcgaaatcccaatggggatag
aaattttattgttccaagattTTCGAGtgggaatgaaatcaaagtcaatt
tcccagtggggctgaaattccagcgtattttcccaccggggaccaaattt
ttgccaaattttccagtggggatggggtcCCAGTGGCTCTGTGACACATG
GGTTAAATACTGACAAAATATGTTAAGCGGCTTAcactaaggtcccgaat
aaaaGGAGGGTCCGAAATTGTACCTCCAGAAATTCCCGGTAGGTAGTTAT
AAGCTAAAaacaggctatttagagcaatttAGCtacagaaaatgttttca
aaagtaaataagAAGGAGGTTCCCTATAAGGATGGGAGGGGgtccgaaaa
ttttttgaaaattaagaaaTGGAGGAGATgtttattcgggaccttagagt
ggCTGAATAGAAAAATTTACGTCAAAACGGAACAATAAGGGCGTTTTTTA
AAACACACCCGGTGTCTGCTATCTATATTTAAATTAATGAATCCGGGTTT
TCAATTCagacaaaaaacaattttctaaGTATATGTCGATATCTGATTGT
TTAACTGCGACATAGACAAAACTGGTTCAGCATTCGAAATATCTACATGG
TTATTCTAAAGCAtaattaaaaatctaaaataatttcaaattagaaattt
tcatttcaatgtttttaaactGATGATGGTGGTCGGATGACACCGAAACG
tcttaaataaattttgattttattaaaaataaaatgaagtcgcttctgtg
tttgaaatttttattgaactcattcaggaggatcaaccaatttgataaaa
taatttCACATAAATCACTTTATAATATTCAATCTTTCAGTCGCGAGCTG
ATTTTGACGACTTTTGGAGTAACATTGGAACAACCTCTGATGAGGCGGTA
TCTTCAACATATAATTCATCAAGTTTCGAAAGCTCTTCAACAGCTATTAA
cgatgatgaagaagaagaaaatgatgaaaatgaaaaattcgtTGAAAATG
GACAAGAGCTTGTTGAGCAGAAGGATGCTGAACTTAGAGAGCATGTTGAC
GATGGACAGATATATATCCCAGATACACCAGAACTTgttgaaaatgaaca
aaaagatGTTGAACTTAGAAAGTTTGTTGACGATGGACAGATATTTGTTG
CAGATACACCAGAACTTTTTAAGAATGAACACAAACTTGTTGAAAATCAA
TCGGAAAGTGTTGAAAAGTACAAAATAGTTTTGAGTTCAAATGATGAAAG
TGACGACGAAGATGAAATAGTTGTTGATGATTTTAGCGTTGGAAGTGTGG
TCGAAAGTGGTGTTCAATTAGTTTTGACCGAACAAAGTTCTGTTGAGAGT
GAAGGGAAATATGCCGATGCTGACCATAGCGGTGTTGAAGACAATTTGCA
GCAGGAATCTTCAAAGAAGTTTGTTGAAGATGAAatgattgaaattgaaa
atgcaCAAACCAAAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014763XLOC_014763Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026273-exon-sc0000566-1491911889:113956..114071TCONS_00026273-exon-sc0000566-1491911889:113956..114071Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:113956..114071TCONS_00026273-exon-sc0000566-1510915933:113956..114071Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:113956..114071TCONS_00026273-exon-sc0000566-1575043694:113956..114071Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:120035..120115TCONS_00026273-exon-sc0000566-1491911889:120035..120115Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:120035..120115TCONS_00026273-exon-sc0000566-1510915933:120035..120115Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:120035..120115TCONS_00026273-exon-sc0000566-1575043694:120035..120115Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:120505..120663TCONS_00026273-exon-sc0000566-1491911889:120505..120663Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:120505..120663TCONS_00026273-exon-sc0000566-1510915933:120505..120663Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:120505..120663TCONS_00026273-exon-sc0000566-1575043694:120505..120663Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:122410..122484TCONS_00026273-exon-sc0000566-1491911889:122410..122484Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:122410..122484TCONS_00026273-exon-sc0000566-1510915933:122410..122484Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:122410..122484TCONS_00026273-exon-sc0000566-1575043694:122410..122484Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:122951..123037TCONS_00026273-exon-sc0000566-1491911889:122951..123037Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:122951..123037TCONS_00026273-exon-sc0000566-1510915933:122951..123037Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:122951..123037TCONS_00026273-exon-sc0000566-1575043694:122951..123037Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:123573..123734TCONS_00026273-exon-sc0000566-1491911889:123573..123734Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:123573..123734TCONS_00026273-exon-sc0000566-1510915933:123573..123734Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:123573..123734TCONS_00026273-exon-sc0000566-1575043694:123573..123734Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:124044..124181TCONS_00026273-exon-sc0000566-1491911889:124044..124181Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:124044..124181TCONS_00026273-exon-sc0000566-1510915933:124044..124181Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:124044..124181TCONS_00026273-exon-sc0000566-1575043694:124044..124181Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:124838..125029TCONS_00026273-exon-sc0000566-1491911889:124838..125029Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:124838..125029TCONS_00026273-exon-sc0000566-1510915933:124838..125029Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:124838..125029TCONS_00026273-exon-sc0000566-1575043694:124838..125029Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:125891..126040TCONS_00026273-exon-sc0000566-1491911889:125891..126040Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:125891..126040TCONS_00026273-exon-sc0000566-1510915933:125891..126040Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:125891..126040TCONS_00026273-exon-sc0000566-1575043694:125891..126040Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:126498..126596TCONS_00026273-exon-sc0000566-1491911889:126498..126596Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:126498..126596TCONS_00026273-exon-sc0000566-1510915933:126498..126596Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:126498..126596TCONS_00026273-exon-sc0000566-1575043694:126498..126596Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:126717..126863TCONS_00026273-exon-sc0000566-1491911889:126717..126863Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:126717..126863TCONS_00026273-exon-sc0000566-1510915933:126717..126863Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:126717..126863TCONS_00026273-exon-sc0000566-1575043694:126717..126863Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:127389..127481TCONS_00026273-exon-sc0000566-1491911889:127389..127481Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:127389..127481TCONS_00026273-exon-sc0000566-1510915933:127389..127481Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:127389..127481TCONS_00026273-exon-sc0000566-1575043694:127389..127481Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1491911889:128446..129073TCONS_00026273-exon-sc0000566-1491911889:128446..129073Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1510915933:128446..129073TCONS_00026273-exon-sc0000566-1510915933:128446..129073Clytia hemisphaericaexon
TCONS_00026273-exon-sc0000566-1575043694:128446..129073TCONS_00026273-exon-sc0000566-1575043694:128446..129073Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566supercontigsc0000566:113956..129073 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.113308	0	0.245144	0	0	0.0788462	0	0.102069	0	0	0	0	0	0.128491	0	0.231948	0	0.826957	0	0.0411518	1.39883	0.202098	0.373886	0	0.445496	0.308998	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026273 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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