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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026223 ID=TCONS_00026223|Name=TCONS_00026223|organism=Clytia hemisphaerica|type=transcript|length=1166bp
GAAAATTGCAACCAAAGTTCTAATATTAATACTTatgtaattttatgaaa
ctatgaCTCTGACTggtttggctctgaccggttagtagatttgctctgac
cggttagtagattagctctgaccggttaatagattggctctgaccggtta
atagattagctctgaccggttaatagattggctctgaccggttaatacat
tggctctgaccggttaatagattagctctgaccggttaatagattggctc
tgaccggttaatagattggctctgaccggttaatacaTTGGCTCTGACAG
GTTAATACATTGGcttgaccggttaatagattggctctgacaggttaata
gattggctctgaccggttaatagattttCCAGTTATATAAGATTTATTTC
ACCGGTTGTTGTCTGTGGTCGGTGGAATTAAGATTTGTTGTTTGTGTTCT
GTATTTGTTCATGAGAGCTTGCTGCAAAAATCCTAATTCccattttcatt
attatatactttcaggtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTGTCTGAATTTCTCACGTACAAGG
TTCAATATCTTTGCAAACACCAACAAATTCTGCTAATAAGATGGACAGGT
GAAAAGCATGTTTAAACTCAAAGGAAACAACAATGGAATCTGATGTCATG
GTTTGTTTGCAGTTGGATTAAGGTCTTTTTATCCCTGTTTCACCAGAATG
ATTTCCTGCTTGATTACGCAAATAGTCCCAAACAAGACACCAGAATGGGG
CTAGACTACAATTACAAGATAATTGATATGAACCAACCATACAGATataa
aaaatgctttaaataGAAATTCCAGTTTGGAATTGGAAGTGGACACTGGA
CTATTTTCATACATCacattatataattattcatcttatgaaatactctt
ttcttgagcaTTGATGGACAGTCTGGTTATATTCATACttgttttctcta
aaattttatttgaaagggtAAATTGCTTTTTATCTTAGAATCACACCTCT
ATTGGAATTAGTGAGCCCCCCCCTAAATCCAAGAGTGACCGATTTTTCAT
ATACTGTTTCACAATATATGTTTATTTTCCAAGGTGCTTTTAGTGAGGAA
GGATcaagtcaaagtt Run BLAST on NCBI transcript from alignment at sc0000564:226870..228035 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026223 ID=TCONS_00026223|Name=TCONS_00026223|organism=Clytia hemisphaerica|type=transcript|length=1166bp|location=Sequence derived from alignment at sc0000564:226870..228035 (Clytia hemisphaerica)
aactttgacttgATCCTTCCTCACTAAAAGCACCTTGGAAAATAAACATA
TATTGTGAAACAGTATATGAAAAATCGGTCACTCTTGGATTTAGGGGGGG
GCTCACTAATTCCAATAGAGGTGTGATTCTAAGATAAAAAGCAATTTacc
ctttcaaataaaattttagagaaaacaaGTATGAATATAACCAGACTGTC
CATCAAtgctcaagaaaagagtatttcataagatgaataattatataatg
tGATGTATGAAAATAGTCCAGTGTCCACTTCCAATTCCAAACTGGAATTT
CtatttaaagcattttttatATCTGTATGGTTGGTTCATATCAATTATCT
TGTAATTGTAGTCTAGCCCCATTCTGGTGTCTTGTTTGGGACTATTTGCG
TAATCAAGCAGGAAATCATTCTGGTGAAACAGGGATAAAAAGACCTTAAT
CCAACTGCAAACAAACCATGACATCAGATTCCATTGTTGTTTCCTTTGAG
TTTAAACATGCTTTTCACCTGTCCATCTTATTAGCAGAATTTGTTGGTGT
TTGCAAAGATATTGAACCTTGTACGTGAGAAATTCAGACAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa
cctgaaagtatataataatgaaaatggGAATTAGGATTTTTGCAGCAAGC
TCTCATGAACAAATACAGAACACAAACAACAAATCTTAATTCCACCGACC
ACAGACAACAACCGGTGAAATAAATCTTATATAACTGGaaaatctattaa
ccggtcagagccaatctattaacctgtcagagccaatctattaaccggtc
aagCCAATGTATTAACCTGTCAGAGCCAAtgtattaaccggtcagagcca
atctattaaccggtcagagccaatctattaaccggtcagagctaatctat
taaccggtcagagccaatgtattaaccggtcagagccaatctattaaccg
gtcagagctaatctattaaccggtcagagccaatctattaaccggtcaga
gctaatctactaaccggtcagagcaaatctactaaccggtcagagccaaa
ccAGTCAGAGtcatagtttcataaaattacatAAGTATTAATATTAGAAC
TTTGGTTGCAATTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026223-exon-sc0000564-1491911889:226870..228035 | TCONS_00026223-exon-sc0000564-1491911889:226870..228035 | Clytia hemisphaerica | exon |
| TCONS_00026223-exon-sc0000564-1510915933:226870..228035 | TCONS_00026223-exon-sc0000564-1510915933:226870..228035 | Clytia hemisphaerica | exon |
| TCONS_00026223-exon-sc0000564-1575043694:226870..228035 | TCONS_00026223-exon-sc0000564-1575043694:226870..228035 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000564 | supercontig | sc0000564:226870..228035 . |
Blast
The following BLAST results are available for this feature:
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