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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026203 ID=TCONS_00026203|Name=TCONS_00026203|organism=Clytia hemisphaerica|type=transcript|length=485bp
ATTGTATTGGCGCCATAGAGAGCTTTGAAGATTGCTGCTTCAACAACAGA
TTACGATATACTgaaatctgTTCATCAAACGACGGTGATATTCAAATACT
CTGGAAGCATTTTATACGTTTTTTCTTGTTAGACTTCGAAGCGAAACGTA
TGGTACAACCTGTGGAATCTCTTCTGTggtcttttgaaaaaatggtgCGG
ATTAGCACTGTATAGCAGAAAGAATGTTGAGCTCAGTTAACCATGGTTGA
TGTTGATGCAGATGATCGTCACTGAAGATTGATGCNGTGGAATCTCTTCT
GTggtcttttgaaaaaatggtgCGGATTAGCACTGTATAGCAGAAAGAAT
GTTGAGCTCAGTTAACCATGGTTGATGTTGATGCAGATGATCGTCACTGA
AGATTGATGCAGGATACATCAATGACGCCACAGTGCTTGTGCTTATTTTa
tacttacacgtttttttttataaggaaccttaact Run BLAST on NCBI transcript from alignment at sc0000564:221462..222838- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026203 ID=TCONS_00026203|Name=TCONS_00026203|organism=Clytia hemisphaerica|type=transcript|length=1377bp|location=Sequence derived from alignment at sc0000564:221462..222838- (Clytia hemisphaerica)
ATTGTATTGGCGCCATAGAGAGCTTTGAAGATTGCTGCTTCAACAACAGA
TTACGATATACTGTAAGTTTATATACCCCTGGATTTATCCGTTTCTGATG
GACGTTTGGTTAAAGAGATTCCTGCATAAAAAATGAAACTTAAGCCATGA
ATAGCTATAATTAAAATCGTTTAAAAAATTAAAGTCAAAGTTGNTTAATC
CATGAATAGCTATAATGAAAATCGTTTAAAAAATTAAAGTCAAAGTTGTC
AACAATGATTCTATCCTAAAATATTGACATCAGAAGTTCCAAATTCAAGA
CATCTGCACTCTGTGGAAGCCACATTGAAATAATAATTTCAAAGTTTAAT
CCTTTATCCATAGTAGGTAAAGATTAGAGAACTAGATAAAAAATTAAATG
ACTTTTTATGGTATACAAACCCTCTAAATGTCGTGTGCCTAGTGGTCAAT
CATACTACATTTAGTTCAACTTCGGGTATCCTTCTAGTCTGCTCTCGTTT
TTGTATGGCTTCCACAAAGTGCAGATGTCTTGAATTTGGAACTTTGGATG
TCAATAACTTGGGATAGAATCGCTGTTGACAACTTTAACTTGAATTTTCC
AAATGCTTTTCATAATAGCTATGCCCTAACAAAGTTTTATTTTTTGTGCC
GGAATCCCTTTAAATACCTTAGAATTTCAGCCCTAGTTGGAAATTAACTT
TTGTTTCATCCCTTCGAAATTCAACGTTTAAAAATTTCGAAATCATTGCC
ACTGAATTTGCTAACCTTGAAACAAAGGAATTTCTATCCCCATTGGGATT
TCAATAGGAATAGGAATTATCTCCACTGAGAAGAAAAGTTCTACCGGAAA
CAGGGGTGTCTATGGCATTGTTTTAAGTTTTAAAGATTGTTCAGCTTTGA
TTGTCTATTTTAATTATTTTAAAAACCGATTTATTCTCTCGTTTTTTTTT
TCAGGAAATCTGTTCATCAAACGACGGTGATATTCAAATACTCTGGAAGC
ATTTTATACGTTTTTTCTTGTTAGACTTCGAAGCGAAACGTATGGTACAA
CCTGTGGAATCTCTTCTGTGGTCTTTTGAAAAAATGGTGCGGATTAGCAC
TGTATAGCAGAAAGAATGTTGAGCTCAGTTAACCATGGTTGATGTTGATG
CAGATGATCGTCACTGAAGATTGATGCNGTGGAATCTCTTCTGTGGTCTT
TTGAAAAAATGGTGCGGATTAGCACTGTATAGCAGAAAGAATGTTGAGCT
CAGTTAACCATGGTTGATGTTGATGCAGATGATCGTCACTGAAGATTGAT
GCAGGATACATCAATGACGCCACAGTGCTTGTGCTTATTTTATACTTACA
CGTTTTTTTTTATAAGGAACCTTAACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026203-exon-sc0000564-1575043694:222777..222838 | TCONS_00026203-exon-sc0000564-1575043694:222777..222838 | Clytia hemisphaerica | exon |
| TCONS_00026203-exon-sc0000564-1575043694:221462..221884 | TCONS_00026203-exon-sc0000564-1575043694:221462..221884 | Clytia hemisphaerica | exon |
| TCONS_00026203-exon-sc0000564-1510915933:222777..222838 | TCONS_00026203-exon-sc0000564-1510915933:222777..222838 | Clytia hemisphaerica | exon |
| TCONS_00026203-exon-sc0000564-1510915933:221462..221884 | TCONS_00026203-exon-sc0000564-1510915933:221462..221884 | Clytia hemisphaerica | exon |
| TCONS_00026203-exon-sc0000564-1491911889:222777..222838 | TCONS_00026203-exon-sc0000564-1491911889:222777..222838 | Clytia hemisphaerica | exon |
| TCONS_00026203-exon-sc0000564-1491911889:221462..221884 | TCONS_00026203-exon-sc0000564-1491911889:221462..221884 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000564 | supercontig | sc0000564:221462..222838 - |
Blast
The following BLAST results are available for this feature:
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