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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026163 ID=TCONS_00026163|Name=TCONS_00026163|organism=Clytia hemisphaerica|type=transcript|length=1187bp
CACAAGCGAAACTAAAGTTATCGCATTTTAAAGCTTAAAAACTGCCGATT
TTTTCCATGAAACAGAGTGTCACCCAAAAATTTGCATTGTTTAAGTGGTT
AATAAATTGACACTGACTGATGATTATGCTATCAAAGTTATGATTTTTAG
CCATAGCAATGATAAcactttgagaaaatcaaaaagatttttggtaacac
tcaaccaattttttaaattgatcaTGAATGCAGTACACATGATATGAAAC
AGAATCTGCTGTAAAAATCTTGTTCAACTTCAGAACCCTATATAGGGTTA
ATGGAAAGGTTTTCAAGATGTATCAAATGCTTAGATTTTGATACAAAGTT
ACTGTTTCAGCTTAAAAAACGTTTGAGGTGATATGGTtaagtgaaaattt
cataatttttatttcagtaaAGTAAGATAATTTTCTGTCATTCCGTAacc
aaaaatgatttctcaattAAAAACCAGTCTTCCCCCAATGGCAATTAATT
TATGCCTGGTTTGAAAGTACTCAGTAAGAGGTGGAaacttgccaaatatt
ttactcTAAAAATGGTTCCTTAAAATATtacagcatttttaatttttccg
tcattccgtaaccaagatttttggaaaataaaatcctCAACTGTTCAATC
CAGGGAAGGCCAAACATGCTGTAAATGAGTTTTCTTGATCAATTGTTGGC
CTATGTTGGATTTTGAATAACTAAAACTGCAGCATTCATTGTATTTTTGT
GATATGGCTGTGGCagttttttaagctaaaaagctttaatttcaaggctt
tttagcctgaaaaatggcaaaatcaagtttctgaaGTGCTGTAGCTCTAA
AACAACTGCAAATGAGTTTAAGATACTATGAGAAATGAtacatataaatt
tgaaaatgtttactgaaaaaaaattttcagctccCAGATGCACTTTTTGg
ttccctttaaaataattttgcccaATGGCTGGTGTCAGATGAGAAATGTG
TGTCTCCAGAAGTTAGATCTAGTTCATTATAATGCACATTTCTATCTCTG
TTACATCATGGtgtgcttggaaatatctcagttACATTTAAATCCACTAC
AAAACAATATGTGAGCCACCAAAAGCACACTGTCtatgctcaaaacaaaa
tgccgacaacttaaatgtttttcgcAGAAATCCAGCA Run BLAST on NCBI transcript from alignment at sc0000563:2684..3870 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026163 ID=TCONS_00026163|Name=TCONS_00026163|organism=Clytia hemisphaerica|type=transcript|length=1187bp|location=Sequence derived from alignment at sc0000563:2684..3870 (Clytia hemisphaerica)
TGCTGGATTTCTgcgaaaaacatttaagttgtcggcattttgttttgagc
ataGACAGTGTGCTTTTGGTGGCTCACATATTGTTTTGTAGTGGATTTAA
ATGTaactgagatatttccaagcacaCCATGATGTAACAGAGATAGAAAT
GTGCATTATAATGAACTAGATCTAACTTCTGGAGACACACATTTCTCATC
TGACACCAGCCATtgggcaaaattattttaaagggaacCAAAAAGTGCAT
CTGggagctgaaaattttttttcagtaaacattttcaaatttatatgtaT
CATTTCTCATAGTATCTTAAACTCATTTGCAGTTGTTTTAGAGCTACAGC
ACttcagaaacttgattttgccatttttcaggctaaaaagccttgaaatt
aaagctttttagcttaaaaaactGCCACAGCCATATCACAAAAATACAAT
GAATGCTGCAGTTTTAGTTATTCAAAATCCAACATAGGCCAACAATTGAT
CAAGAAAACTCATTTACAGCATGTTTGGCCTTCCCTGGATTGAACAGTTG
aggattttattttccaaaaatcttggttacggaatgacggaaaaattaaa
aatgctgtaATATTTTAAGGAACCATTTTTAgagtaaaatatttggcaag
ttTCCACCTCTTACTGAGTACTTTCAAACCAGGCATAAATTAATTGCCAT
TGGGGGAAGACTGGTTTTTaattgagaaatcatttttggtTACGGAATGA
CAGAAAATTATCTTACTttactgaaataaaaattatgaaattttcactta
ACCATATCACCTCAAACGTTTTTTAAGCTGAAACAGTAACTTTGTATCAA
AATCTAAGCATTTGATACATCTTGAAAACCTTTCCATTAACCCTATATAG
GGTTCTGAAGTTGAACAAGATTTTTACAGCAGATTCTGTTTCATATCATG
TGTACTGCATTCAtgatcaatttaaaaaattggttgagtgttaccaaaaa
tctttttgattttctcaaagtgTTATCATTGCTATGGCTAAAAATCATAA
CTTTGATAGCATAATCATCAGTCAGTGTCAATTTATTAACCACTTAAACA
ATGCAAATTTTTGGGTGACACTCTGTTTCATGGAAAAAATCGGCAGTTTT
TAAGCTTTAAAATGCGATAACTTTAGTTTCGCTTGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026163-exon-sc0000563-1491911889:2684..3870 | TCONS_00026163-exon-sc0000563-1491911889:2684..3870 | Clytia hemisphaerica | exon |
| TCONS_00026163-exon-sc0000563-1510915933:2684..3870 | TCONS_00026163-exon-sc0000563-1510915933:2684..3870 | Clytia hemisphaerica | exon |
| TCONS_00026163-exon-sc0000563-1575043694:2684..3870 | TCONS_00026163-exon-sc0000563-1575043694:2684..3870 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000563 | supercontig | sc0000563:2684..3870 . |
Blast
The following BLAST results are available for this feature:
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