TCONS_00026146 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026146
Unique NameTCONS_00026146
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1708

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026146 ID=TCONS_00026146|Name=TCONS_00026146|organism=Clytia hemisphaerica|type=transcript|length=1708bp
TGGATCTCTTATTAGATAAATAATACACAGAAGACCTGTCTATCTAACAT
ACAGTGTAGTCAGATCCTATCAACTATAGTGGTTTACATATTGTGGATGT
CTGGTCGCAAAGTCAAACAAGTTACATTATAATCGattttgtgtGCTCGG
CGATCTGTTGAAAAGATGACTTCAGTCGTGGAAGAAGGTGTGCTTTATCC
TACAGAAGtggaaataaaaaatgccaTACAACCGAAACCGAAGATTGCTG
AAGATTTCCTATTGGCTGAAGTTTCGATTCGTATTTCGAACCCCTTGGCA
ACCATCAAATTTTATACTGGTGTGCTTGGAATGACTTTGTTGACTTGGTG
GAATGACCAGAAAACGAGAACAACGAATTACGTTTTCACATTTGTAGATG
AAGCGATCATACCACCAAAAGAAAGAGACGAAAATCATTTCAATAAGTGG
AGATTATCTAGAGCTGGAAATATTGAAATGGCTTATTCATGGGATGGCAT
TACAGGCAAAACGAAATACGAATGTGGAGCCTTGAGGCCGAACGAATTTG
gtCACTTTGGTGTTGCAGTACCAAACTATAAGAAGGCGATGGAGCGATTT
CGAAGTCTTGGATGCACGATTATACCTTGTAAAAATGACGAATCTCTGAG
TTATATTCTGGATCCTGACGGTTATCGAATCGAGATTTTCACAGTACGTT
GGGGCGATGATGATCAAAATGATGGTTAAAAGTCAAATAGTTTGatgaaa
aagttcatcattCGAAGAATAAGATCTTACTTTCTGTAAACAGTACCGTG
CGCCCTGATGAAAACGGGAGCAAGTTAGTATATCACCgtattttttaaca
attatatatttttctattcttCAATCAAAAAGGTcccttttgaaaataat
aacaagaagccggagcggcgtgaaggtcgaGCTGACGtagcaataaccga
atgtcgttcgtaccgggttccttaagtgacgcaaaaaaatttccttccca
tctTCCACTCTGAGCTactattctttgacactttctttgtattgctaagt
tttgaaagtttttgatgcatttcccgaaataTCGAAACTTTTGCCGTTTt
ggggattcgaacccactatatacaaagcacctattatcagaacgccagcg
ccttaaccactcggccatcgagtcacaaatgcattaaggagttcaaagtt
ccttataaacatggtatttactccaaactctacccgggggctaaaaccct
aaccaggggtttTNacatcgcgcgggtaggcggggcaaaaattctagatc
ggcggttggtttagcctggacttgttaatttattgcgcgcacacaaaatc
ttttcgatcagttgctttttaaaggtccattctgctgcgcgctggaccaa
atATTGAAAACCACTAGGTTAAAAGCCTTAAAAGGCTAGGTCAAAATCTA
CAATGCACACATGcacaattttgaaacaaaagcgTCATAAATCCTTTTTA
CACATATTCCACCTAGTTTTTTGGGGCAAAGGTAACGGTGTTTGAAAGCT
AGATTATTCTTCAGGTTGTAAATAGTGTTTTCTGTATAAATacaattttt
catttgaatataggacaactcttaaaatttgaaaaataaatttacgcgtg
aatgcgtgaatgggctttggGTGAATTGGGTGAATTACGAAAAAAGAGCg
taaatgcg
Run BLAST on NCBI

protein sequence of TCONS_00026146-protein

>TCONS_00026146-protein ID=TCONS_00026146-protein|Name=TCONS_00026146-protein|organism=Clytia hemisphaerica|type=polypeptide|length=187bp
MTSVVEEGVLYPTEVEIKNAIQPKPKIAEDFLLAEVSIRISNPLATIKFY
TGVLGMTLLTWWNDQKTRTTNYVFTFVDEAIIPPKERDENHFNKWRLSRA
GNIEMAYSWDGITGKTKYECGALRPNEFGHFGVAVPNYKKAMERFRSLGC
TIIPCKNDESLSYILDPDGYRIEIFTVRWGDDDQNDG
Run BLAST on NCBI

transcript from alignment at sc0000563:44504..49416-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026146 ID=TCONS_00026146|Name=TCONS_00026146|organism=Clytia hemisphaerica|type=transcript|length=4913bp|location=Sequence derived from alignment at sc0000563:44504..49416- (Clytia hemisphaerica)
TGGATCTCTTATTAGATAAATAATACACAGAAGACCTGTCTATCTAACAT ACAGTGTAGTCAGATCCTATCAACTATAGTGGTTTACATATTGTGGATGT CTGGTCGCAAAGTCAAACAAGTTACATTATAATCGGTAAGGATACCATAC GGTAGTCAATTTTTTTGACCGACTTTGCTGGCGAATAATTTTTAGTTACT TTACTTCCGTGAATACTTTAGTGCTGAATTTTGGGTTTATATGCGCTACT GAAGACAAAGGATTACCACAGCTAAAGGAACTGCAATACTGTAAAATTGG TCATTTTAATTAAGTTTTCCAATCCGAATTCCTCCAAATAGCCGAAGTTA CTGTGGTAAATAAATAATTCTTTGGCAAAAAACTATTTGTCGGTAAAAAA GTGACAGTGTTTTAGCAAGTGAAGAAATCTTTGCTGACGAGTTTTTCCCG ACAATTTTTCTGCTAACAATTAAACAAATCAACAAACACCTACCTTAAAA AATATCTTGCCTCTGTTTTCTTTAAAGATTTTGTGTGCTCGGCGATCTGT TGAAAAGATGACTTCAGTCGTGGAAGAAGGTGTGCTTTATCCTACAGAAG TGGAAATAAAAAATGCCATACAACCGAAACCGAAGATTGCTGAAGATTTC CTATTGGCTGAAGTTTCGATTCGTATTTCGAACCCCTTGGCAACCATCAA ATTTTATACTGGTGTGCTTGGAATGACGTAGGTTTATGTATTTGTAAAAA CAGAGTAAAATTAAGAGGGTGTGCAAACAGAATCATACAAAAACCCGAAC CAAGGGATTGGGTTCAAGTTTGATTTGAACTCAGAGCACTGCAGATTACA TTATTTATCATTACACATAAACATGGTCTTTGTAAACAAGTTCATAATGA GTAAATTGCTAAGAAGAGATTCTAACTATAATCATGCTGGTTTGGAACTT CTCTATGTGGTGACTATCTGTCCTTCTCAGATCAATGGTCAAATGTCAAG GAAAAATTTTTACCCCCTCCTCTCACGCATGTCAAGGAGATCAAACTATC CATCCAAAGGGTGTTGCTGCACTCAAAACATGGGAGAAAAAAATCGAAGG GGGTCCCAAATAATTGGAAAAGAATCCAGGGGGGCTGCCTTTAAAAAAAA GGCCTCTTAAACATAGGGGGTATAACCCATTTTATCTTCTCACTCCGACA GTTTGTTGACTTGGTGGAATGACCAGAAAACGAGAACAACGAATTACGTT TTCACATTTGTAGATGAAGCGATCATACCACCAAAAGAAAGAGACGAAAA TCATTTCAATAAGTGGAGATTATCTAGAGCTGGAAATATTGAAATGGCTT AGTAAGTGGGAAACTATTTGATGGGAGGTAGACGAAACTTGAAAATCCAA AGAATTTGTGATTCTATAAGAATAAAATTTCGTATTACAGACTCTTTTAC TCTGACCTCCTGTTTTTTTAAATCATTTTTTCGAAAAAGTGACTTTCGTG ATTTTTTCGGATTATTTACGCCCTTGGACCTCACGTTCATTTCAAGAAAG AAGAAAAGAGAAACAAGAAATTTGGTTTGGTACTTTGTTGGTGTCGTATG AGATAAGGCTGTTACATTGTCAACATGTATTTAGAGCTAATGTTTTTGTT TGCATGTGTTTACATTGATTTCATTTTCTTCATTAGTTCATGGGATGGCA TTACAGGCAAAACGAAATACGAATGTGGAGCCTTGAGGCCGAACGAATTT GGTAAGCCACAATTTTTGTTCCCGTGTATCCAAGGTCTTAATTTACATGG TAACAGAGAGATAGGACCAACTGCGTTTCGATACCCATAAGAGCAATTTT GAATATGCGTTCCGTGAAAAATAAACGGTTAAATTAAATAAACTTAACTT TAGCTGACGTCACAACATTGTTTCAACATCGATACAAATTTTTGTTCGTG TCACAGGCGTTTCCTTGCCATTACTTTGACTTTGCAGTTTGATTTACTAA TGATTTGTATTTTTCAAAGGTCACTTTGGTGTTGCAGTACCAAACTATAA GAAGGCGATGGAGCGATTTCGAAGTCTTGGATGCACGATTATACCTTGTA AAAGTAAGAAATAGTTCTTCGCTTGTTCCCATACTTCACTTCCCCTTTTT AAAGCTGTAAAGTGAGTATTGCTAAAGGGTCCTACAACTTTCACCAAGCG TTTTAAAAATCAGTCCCCCATAGAGTTTGTTTTTTGGCAAAAATTAGGAA CATTAGGAAATCTTGGGGGAAGTTAATCCATTTATCAGCGACTGTAGTAC CCCCTGCAGTCCTGGATATTATTTATTTCTCTCTTTTTTTCATCACAGAT GACGAATCTCTGAGTTATATTCTGGATCCTGACGGTTATCGAATCGAGAT TTTCACAGTACGTTGGGGCGATGATGATCAAAATGATGGTTAAAAGTCAA ATAGTTTGATGAAAAAGTTCATCATTCGAAGAATAAGATCTTACTTTCTG TAAACAGTACCGTGCGCCCTGATGAAAACGGGAGCAGTTTAGCTCTTTGG CGGTTTTAATAATTTTCCAAATTCGAAAAATATTTTACACACCTTCAGTA TAAGGGGGATATCTCTTGAAAGGTTGCTAATACACCCTATAAAGTATATA TTTTCTGAAAGCTGGGTAAAAAACCTTTCAGATGAAAGAAAAAAAAAATC CAAATTATTATTTTGATGACGTCAGCAGGGATTTCAAGTTTGAAAATAAA AAATAAATTTTTACGTAAAAATATTTTTTTTTCACAAAAATCATCATAAA ATCCAAAATAACTGTAAGTTTTCTCTAAAACTTTGTACAAATGTTCTTAT ATACAATATAATCAAATGCTGAAAATTTTAGACCTAATGCTTTACAAAAA CTGAAAATATTGATATTTCGGTGAACGCGTAAAATGACAGAAAATGGTAT AAAATTGTAATAAATCTACTATCAGTTTCATGACATGAAATTCTTCTTAT GAGTCTATTTCAAGGGTTCAAAATCATGAAACTAGACATTCTAAGTATAT TTAATGATGTCTTGCTAGGAATTGGCCAGTTAATATGTCCATTTTCAAAT TTTAGCCATGTACGGCAATAACGTGAGCTATGCTACGTCCATTCAGTGTG TCATGCGGTAACTTGAAAATCAGAAACGTCCATGAAATGAAATTGGTCAA ATGACCCTTCTGTTGTAAACAAAGGCCATTGTATGTGATTTGAGCAAGTA AATCAGTGATAAATCCAAGTGCTAGTCATTTATATGGTCATGGAGACGGC TTGTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAA GATTTAGTTAGCCTTGTTGTGGCTTGAAAACTGGATTATGAGACATGTTA CTAATGTCATTTCATCTGACAAAAATGTGGGCGACGTCTGACGTATACCA AATCAACCCCCATGGATATTGTGATAGAATGAGTTACTCTTTACAAATAA TTTGAAGCCAAAACATTACACAAACTATAAAAGTTCATTCTGCATTGATT TCGACCATAAAAACCAGTTGAATCTGCTCAAATCTTCTTTAACATCAACA AGTGTGGCTGCTTCAAACTGAATATTTCAATGTTTTGATTTTGCAGCTTC TCAGCCTACATATTACTATTAGCACACGGGTCTATGATCGTTCAACTGAG ACTTTTCCGTCTCTAATAACATAAGTTCACCTGTACATATAAAAATCACG GGTTTTTATAGCCTAGAAACTCTGTTTTTCTCAATAATTTAATGGGGGGT CGTTAACGACCCCCATATCCGCCAAAGAGTTAGTATATCACCGTATTTTT TAACAATTATATATTTTTCTATTCTTCAATCAAAAAGGTCCCTTTTGAAA ATAATAACAAGAAGCCGGAGCGGCGTGAAGGTCGAGCTGACGTAGCAATA ACCGAATGTCGTTCGTACCGGGTTCCTTAAGTGACGCAAAAAAATTTCCT TCCCATCTTCCACTCTGAGCTACTATTCTTTGACACTTTCTTTGTATTGC TAAGTTTTGAAAGTTTTTGATGCATTTCCCGAAATATCGAAACTTTTGCC GTTTTGGGGATTCGAACCCACTATATACAAAGCACCTATTATCAGAACGC CAGCGCCTTAACCACTCGGCCATCGAGTCACAAATGCATTAAGGAGTTCA AAGTTCCTTATAAACATGGTATTTACTCCAAACTCTACCCGGGGGCTAAA ACCCTAACCAGGGGTTTTNACATCGCGCGGGTAGGCGGGGCAAAAATTCT AGATCGGCGGTTGGTTTAGCCTGGACTTGTTAATTTATTGCGCGCACACA AAATCTTTTCGATCAGTTGCTTTTTAAAGGTCCATTCTGCTGCGCGCTGG ACCAAATATTGAAAACCACTAGGTTAAAAGCCTTAAAAGGCTAGGTCAAA ATCTACAATGCACACATGCACAATTTTGAAACAAAAGCGTCATAAATCCT TTTTACACATATTCCACCTAGTTTTTTGGGGCAAAGGTAACGGTGTTTGA AAGCTAGATTATTCTTCAGGTTGTAAATAGTGTTTTCTGTATAAATACAA TTTTTCATTTGAATATAGGACAACTCTTAAAATTTGAAAAATAAATTTAC GCGTGAATGCGTGAATGGGCTTTGGGTGAATTGGGTGAATTACGAAAAAA GAGCGTAAATGCG

Coding sequence (CDS) from alignment at sc0000563:44504..49416-

>TCONS_00026146 ID=TCONS_00026146|Name=TCONS_00026146|organism=Clytia hemisphaerica|type=CDS|length=2820bp|location=Sequence derived from alignment at sc0000563:44504..49416- (Clytia hemisphaerica)
ATGACGAATCTCTGAGTTATATTCTGGATCCTGACGGTTATCGAATCGAG
ATTTTCACAGTACGTTGGGGCGATGATGATCAAAATGATGGTTAAGTCAC
TTTGGTGTTGCAGTACCAAACTATAAGAAGGCGATGGAGCGATTTCGAAG
TCTTGGATGCACGATTATACCTTGTAAAATTCATGGGATGGCATTACAGG
CAAAACGAAATACGAATGTGGAGCCTTGAGGCCGAACGAATTTGTTTGTT
GACTTGGTGGAATGACCAGAAAACGAGAACAACGAATTACGTTTTCACAT
TTGTAGATGAAGCGATCATACCACCAAAAGAAAGAGACGAAAATCATTTC
AATAAGTGGAGATTATCTAGAGCTGGAAATATTGAAATGGCTTAATGACT
TCAGTCGTGGAAGAAGGTGTGCTTTATCCTACAGAAGTGGAAATAAAAAA
TGCCATACAACCGAAACCGAAGATTGCTGAAGATTTCCTATTGGCTGAAG
TTTCGATTCGTATTTCGAACCCCTTGGCAACCATCAAATTTTATACTGGT
GTGCTTGGAATGACATGACGAATCTCTGAGTTATATTCTGGATCCTGACG
GTTATCGAATCGAGATTTTCACAGTACGTTGGGGCGATGATGATCAAAAT
GATGGTTAAGTCACTTTGGTGTTGCAGTACCAAACTATAAGAAGGCGATG
GAGCGATTTCGAAGTCTTGGATGCACGATTATACCTTGTAAAATTCATGG
GATGGCATTACAGGCAAAACGAAATACGAATGTGGAGCCTTGAGGCCGAA
CGAATTTGTTTGTTGACTTGGTGGAATGACCAGAAAACGAGAACAACGAA
TTACGTTTTCACATTTGTAGATGAAGCGATCATACCACCAAAAGAAAGAG
ACGAAAATCATTTCAATAAGTGGAGATTATCTAGAGCTGGAAATATTGAA
ATGGCTTAATGACTTCAGTCGTGGAAGAAGGTGTGCTTTATCCTACAGAA
GTGGAAATAAAAAATGCCATACAACCGAAACCGAAGATTGCTGAAGATTT
CCTATTGGCTGAAGTTTCGATTCGTATTTCGAACCCCTTGGCAACCATCA
AATTTTATACTGGTGTGCTTGGAATGACATGACGAATCTCTGAGTTATAT
TCTGGATCCTGACGGTTATCGAATCGAGATTTTCACAGTACGTTGGGGCG
ATGATGATCAAAATGATGGTTAAGTCACTTTGGTGTTGCAGTACCAAACT
ATAAGAAGGCGATGGAGCGATTTCGAAGTCTTGGATGCACGATTATACCT
TGTAAAATTCATGGGATGGCATTACAGGCAAAACGAAATACGAATGTGGA
GCCTTGAGGCCGAACGAATTTGTTTGTTGACTTGGTGGAATGACCAGAAA
ACGAGAACAACGAATTACGTTTTCACATTTGTAGATGAAGCGATCATACC
ACCAAAAGAAAGAGACGAAAATCATTTCAATAAGTGGAGATTATCTAGAG
CTGGAAATATTGAAATGGCTTAATGACTTCAGTCGTGGAAGAAGGTGTGC
TTTATCCTACAGAAGTGGAAATAAAAAATGCCATACAACCGAAACCGAAG
ATTGCTGAAGATTTCCTATTGGCTGAAGTTTCGATTCGTATTTCGAACCC
CTTGGCAACCATCAAATTTTATACTGGTGTGCTTGGAATGACATGACGAA
TCTCTGAGTTATATTCTGGATCCTGACGGTTATCGAATCGAGATTTTCAC
AGTACGTTGGGGCGATGATGATCAAAATGATGGTTAAGTCACTTTGGTGT
TGCAGTACCAAACTATAAGAAGGCGATGGAGCGATTTCGAAGTCTTGGAT
GCACGATTATACCTTGTAAAATTCATGGGATGGCATTACAGGCAAAACGA
AATACGAATGTGGAGCCTTGAGGCCGAACGAATTTGTTTGTTGACTTGGT
GGAATGACCAGAAAACGAGAACAACGAATTACGTTTTCACATTTGTAGAT
GAAGCGATCATACCACCAAAAGAAAGAGACGAAAATCATTTCAATAAGTG
GAGATTATCTAGAGCTGGAAATATTGAAATGGCTTAATGACTTCAGTCGT
GGAAGAAGGTGTGCTTTATCCTACAGAAGTGGAAATAAAAAATGCCATAC
AACCGAAACCGAAGATTGCTGAAGATTTCCTATTGGCTGAAGTTTCGATT
CGTATTTCGAACCCCTTGGCAACCATCAAATTTTATACTGGTGTGCTTGG
AATGACATGACGAATCTCTGAGTTATATTCTGGATCCTGACGGTTATCGA
ATCGAGATTTTCACAGTACGTTGGGGCGATGATGATCAAAATGATGGTTA
AGTCACTTTGGTGTTGCAGTACCAAACTATAAGAAGGCGATGGAGCGATT
TCGAAGTCTTGGATGCACGATTATACCTTGTAAAATTCATGGGATGGCAT
TACAGGCAAAACGAAATACGAATGTGGAGCCTTGAGGCCGAACGAATTTG
TTTGTTGACTTGGTGGAATGACCAGAAAACGAGAACAACGAATTACGTTT
TCACATTTGTAGATGAAGCGATCATACCACCAAAAGAAAGAGACGAAAAT
CATTTCAATAAGTGGAGATTATCTAGAGCTGGAAATATTGAAATGGCTTA
ATGACTTCAGTCGTGGAAGAAGGTGTGCTTTATCCTACAGAAGTGGAAAT
AAAAAATGCCATACAACCGAAACCGAAGATTGCTGAAGATTTCCTATTGG
CTGAAGTTTCGATTCGTATTTCGAACCCCTTGGCAACCATCAAATTTTAT
ACTGGTGTGCTTGGAATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014698XLOC_014698Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026146-exon-sc0000563-1575043694:49282..49416TCONS_00026146-exon-sc0000563-1575043694:49282..49416Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1575043694:48690..48889TCONS_00026146-exon-sc0000563-1575043694:48690..48889Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1575043694:48066..48215TCONS_00026146-exon-sc0000563-1575043694:48066..48215Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1575043694:47666..47730TCONS_00026146-exon-sc0000563-1575043694:47666..47730Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1575043694:47314..47397TCONS_00026146-exon-sc0000563-1575043694:47314..47397Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1575043694:46881..47068TCONS_00026146-exon-sc0000563-1575043694:46881..47068Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1575043694:44504..45389TCONS_00026146-exon-sc0000563-1575043694:44504..45389Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:49282..49416TCONS_00026146-exon-sc0000563-1510915933:49282..49416Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:48690..48889TCONS_00026146-exon-sc0000563-1510915933:48690..48889Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:48066..48215TCONS_00026146-exon-sc0000563-1510915933:48066..48215Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:47666..47730TCONS_00026146-exon-sc0000563-1510915933:47666..47730Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:47314..47397TCONS_00026146-exon-sc0000563-1510915933:47314..47397Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:46881..47068TCONS_00026146-exon-sc0000563-1510915933:46881..47068Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1510915933:44504..45389TCONS_00026146-exon-sc0000563-1510915933:44504..45389Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:49282..49416TCONS_00026146-exon-sc0000563-1491911889:49282..49416Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:48690..48889TCONS_00026146-exon-sc0000563-1491911889:48690..48889Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:48066..48215TCONS_00026146-exon-sc0000563-1491911889:48066..48215Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:47666..47730TCONS_00026146-exon-sc0000563-1491911889:47666..47730Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:47314..47397TCONS_00026146-exon-sc0000563-1491911889:47314..47397Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:46881..47068TCONS_00026146-exon-sc0000563-1491911889:46881..47068Clytia hemisphaericaexon
TCONS_00026146-exon-sc0000563-1491911889:44504..45389TCONS_00026146-exon-sc0000563-1491911889:44504..45389Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026146-proteinTCONS_00026146-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000563supercontigsc0000563:44504..49416 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.0358047 0 0 0 0 0 0 2.70688 1.48094 2.31564 1.64232 2.2579 3.36475 0.87862 1.00069 0 0 0.00314996 0 0 0 0.414894 2.43886 9.99837 10.5177 0 0.817077 0.61793 0.693205
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029068Glyas_Bleomycin-R_OHBP_Dase
IPR004360Glyas_Fos-R_dOase_dom
Blast
BLAST of TCONS_00026146 vs. Swiss-Prot (Human)
Match: LGUL (Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 PE=1 SV=4)

HSP 1 Score: 97.0561 bits (240), Expect = 1.058e-22
Identity = 56/151 (37.09%), Postives = 84/151 (55.63%), Query Frame = 1
Query:  250 EDFLLAEVSIRISNPLATIKFYTGVLGMTLLTWWNDQKTRTTNYVFTFVDEAIIPPKERDENHFNKWRLSRAGNIEMAYSWDGITGKTK-YECGALRPNEFGHFGVAVPNYKKAMERFRSLGCTIIPCKND---ESLSYILDPDGYRIEIF 690
            +DFLL +  +R+ +P  ++ FYT VLGMTL+   +    + + Y   + D+  I PKE+DE     W LSR   +E+ ++W     +T+ Y  G   P  FGH G+AVP+   A +RF  LG   +   +D   + L++I DPDGY IEI 
Sbjct:   28 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDI-PKEKDEKI--AWALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEIL 175          
The following BLAST results are available for this feature:
BLAST of TCONS_00026146 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
LGUL1.058e-2237.09Lactoylglutathione lyase OS=Homo sapiens GN=GLO1 P... [more]
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