TCONS_00026144 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026144
Unique NameTCONS_00026144
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1285

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026144 ID=TCONS_00026144|Name=TCONS_00026144|organism=Clytia hemisphaerica|type=transcript|length=1285bp
AATTGTTGAAAATGACTTGACCAAACGGTATAAAACAGGCATCAAACAAC
TCGAAATCATCTCCTCCTTGACGTAAGCAAGAGAAGAGAGCTTTCGCACA
TCTTGAATATTTTGTTTCATAATCTGTCTTTTTTGAAGAAATGGCACAAT
CACTTCCATCAAACCCTGCTGGAGACAAATACGACCACCAATGGGAAGCT
TTGGCTGGATGGTTTCTCGGACCACGTGCAGAAAACCGaaacattttcaa
tgatttGATGTTGAAAGCTTTAAATTGGCATGAAGATCGACGTGAGGAAT
TCTTTCCAGCTGATCCTTCTTATTTCACGGAGGAGATCAAAAATTCTGAA
GCTGCTCAACATGAGTATAAAGACATggaaaaacaaatgaaagaaaTGCA
TCAAGAATTGAATAAATCCATTCCTTTCTTCAGCACCAGATATCAGGGTC
ACATGACATGGGACGTGACAATGCCATCGTTCTTGGGATACGTATCCGGA
TTGCTTTGGAATCAAAACAACGTTGATTCAACTGCTTCACCAGTCACCAC
TAAGTTCGAAGTAGAAGTTGGTCAACAACTCTGCAAATTGATGCGATTTG
ACGACACTAAAGTCACACCATGGGGTCATTTAACAGGATGTGGATCTGTC
GCTAATATTGAATCGATGTGGGCTGCAAGAAACACCAAACTTCATCCATT
GGCTTTGAAAGATTCTTGCGCTGATACGGATTTCCCCGAATTAATAGACG
GTTTGGAGTGCAAGGTATTTGTACCTGgccaacaaaaagaaaagactTTG
ACAGAATGCACCGAATGGGAATTGTTGAATTTGAGAATCGATGATATTTG
TTCTTTGACTGATGACGTCGTCAAATGTATCGAAGAGAGAAACCCGGatt
tcaaaattgacgtcaaagcaACCATTGATAAAGCTTTGCAGaaaaattca
ccAGTGCAACTTGGCTTACCAGAATTTTACCGACGACACAAGATAGGTGA
ACCAAGTGCAAAAGATGCAACGGTGCGAACATATCCACGAGTTTTTTCAC
CAGGAACGAACCATTATTCATGGCCGAAAGCTTCCACCATTCTTGGTATC
GGTGATTCTAATAACATTCACATTCAAGTTGACAGCAAAGCTCGTCAAGA
TATCGAGACTTTGGAGAAGGAGTTAGATTACGCATTGGAACACAAGATTG
CAGTATTCATGGTTGTGGCAGTGATTGGTTCAACAGAAGAAAGTGCCGTG
GATGATATCGCAAGGATCTTGGCTCTCAAACCAAA
Run BLAST on NCBI

protein sequence of TCONS_00026144-protein

>TCONS_00026144-protein ID=TCONS_00026144-protein|Name=TCONS_00026144-protein|organism=Clytia hemisphaerica|type=polypeptide|length=381bp
MAQSLPSNPAGDKYDHQWEALAGWFLGPRAENRNIFNDLMLKALNWHEDR
REEFFPADPSYFTEEIKNSEAAQHEYKDMEKQMKEMHQELNKSIPFFSTR
YQGHMTWDVTMPSFLGYVSGLLWNQNNVDSTASPVTTKFEVEVGQQLCKL
MRFDDTKVTPWGHLTGCGSVANIESMWAARNTKLHPLALKDSCADTDFPE
LIDGLECKVFVPGQQKEKTLTECTEWELLNLRIDDICSLTDDVVKCIEER
NPDFKIDVKATIDKALQKNSPVQLGLPEFYRRHKIGEPSAKDATVRTYPR
VFSPGTNHYSWPKASTILGIGDSNNIHIQVDSKARQDIETLEKELDYALE
HKIAVFMVVAVIGSTEESAVDDIARILALKP
Run BLAST on NCBI

transcript from alignment at sc0000563:40702..43239-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026144 ID=TCONS_00026144|Name=TCONS_00026144|organism=Clytia hemisphaerica|type=transcript|length=2538bp|location=Sequence derived from alignment at sc0000563:40702..43239- (Clytia hemisphaerica)
AATTGTTGAAAATGACTTGACCAAACGGTATAAAACAGGCATCAAACAAC
TCGAAATCATCTCCTCCTTGACGTAAGCAAGAGAAGAGAGCTTTCGCACA
TCTTGAATATTTTGTTTCATAATCTGTCTTTTTTGAAGAAATGGCACAAT
CACTTCCATCAAAGTAAGTAATGTTTGATTTTCAGATCAACTTTTTCAAA
GCACGACTTTGTTTGGCTCTCATATTTTCAAATTTTGTAAAGGATGCTGC
GGTCTCTTTCTTTTTCTCTCGATCAGGTTTTTTACTTGTGAAAAAAGCCA
CATTTTAGTAGAGGTAAATTTCGAACTTTTCAGCCCTGCTGGAGACAAAT
ACGACCACCAATGGGAAGCTTTGGCTGGATGGTTTCTCGGACCACGTGCA
GAAAACCGAAACATTTTCAATGATTTGATGTTGAAAGCTTTAAATTGGCA
TGAAGATCGACGTGAGGAATTCTTTCCAGCTGATCCTTCTTATTTCACGG
AGGAGATCAAAAATTCTGAAGCTGCTCAACATGAGTATAAAGACATGGAA
AAACAAATGAAAGAAATGCATCAAGAATTGAATAAATCCATTCCTTTCTT
CAGCACCAGATATCAGGTAAATATGTTTCACTTAAAATCATGGCATTACG
AGATTCGAACCTTCTGAATCTAAACAATTATTGTTTTTTTTTACTGTACT
ACTGAAAGCCTGTCAACTTAACTCTGATTTTTCAATACTTTCAAATTCTT
CCCAATAATTTTGTAATGTAATCTATTTAAGCACAATTGAGGCGAAATTA
TAATAGTATAATAAATTGCATATTTTTAGGGTCACATGACATGGGACGTG
ACAATGCCATCGTTCTTGGGATACGTATCCGGATTGCTTTGGAATCAAAA
CAACGTTGATTCAACTGCTTCACCAGTCACCACTAAGTTCGAAGTAGAAG
TTGGTCAACAACTCTGCAAATTGATGCGATTTGACGACACTAAAGTCACA
CCATGGGGTCATTTAACAGGATGTGGATCTGTCGCTAATATTGAATCGAT
GTGGGCTGCAAGAAACACCAAACTTCATCCATTGGCTTTGAAAGATTCTT
GCGCTGATACGGATTTCCCCGAATTAATAGGTATGGAAATTCGAAACGAA
CGTTTTTCTAATTCAACAATTGAGGCTAAAATAGCTAATCTGGGACTAGA
TAATTTACATAAGATATTTCGAATCTTTGGAATAGTAGATTACAATTTGG
TCTTAGTTCATCGCCGGTACCTTTCAGATTGCTGTGTTAAATAGTTCGCA
GTTCTAAAGTTGATTATGCTAAATTTTAAGCGTTCCCCTAACCAAGGTTA
CCTTGTTTTTTAGACGGTTTGGAGTGCAAGGTATTTGTACCTGGCCAACA
AAAAGAAAAGACTTTGACAGAATGCACCGAATGGGAATTGTTGAATTTGA
GAATCGATGATATTTGTTCTTTGACTGATGACGTCGTCAAATGTATCGAA
GAGAGAAACCCGGATTTCAAAATTGACGTCAAAGCAACCATTGATAAAGC
TTTGCAGGTAAAAATTGTACTTTGAATGTTAACCCTTTATTCAGTTCCCA
TTGATATTAAAAGTAGACCCGAATTAAGTTCCGAGACAGGTTTTCTCATT
GTTTGTTAGCAAAGCTTTGTCTTTTCCACTACCATGATCTTGTTTTCGGA
CACCAATGAAAAATTTGTTAATCCAACCTTCACTTTTTCATTTAGAAAAA
TTCNACAGGTAAAGATTGTACTTTGAATTTTAACCCTTGATTTGATTCCC
ATTAATTTCAAAAGTAGATTCGAAATAAGTCCCGAGACAGGTTTTCTCAT
TGTTTGTTCGCAAAGCTTTGTCTTTTCCACTGCCATGATCTTATTTTCAG
ACTTGACCACCAATGAAAAATTTGGTAATCCAACCTTAACTTTTTCATTT
AGAAAAATTCACCAGTGCAACTTGGCTTACCAGAATTTTACCGACGACAC
AAGATAGGTGAACCAAGTGCAAAAGATGCAACGGTGCGAACATATCCACG
AGTTTTTTCACCAGGAACGAACCATTATTCATGGCCGAAAGCTTCCACCA
TTCTTGGTATCGGTGATTCTAATAACATTCACATTCAAGTTGACAGCAAA
GCTCGTCAAGATATCGAGAGTAAGTGTCACATTTGCAATACTGGAATGTC
ATGGAAGTCATAGTTTTATGTAGTCCATATCTGCAATACTGTCCAATCGA
TGTAGAATTCTAGTGACGCCCCTGCTTCACAGGCTTTAGAAATTCTGTAA
GATTTCTGTAAGATGTTCTCTAATTTGTAGCTTCTCGGGGGTAATATTTA
CTGTACAAAATCTCACAAATCTTCCTAAAAGCATCTAAAAGTAACTTTAT
CTAACCAACAGCTTTGGAGAAGGAGTTAGATTACGCATTGGAACACAAGA
TTGCAGTATTCATGGTTGTGGCAGTGATTGGTTCAACAGAAGAAAGTGCC
GTGGATGATATCGCAAGGATCTTGGCTCTCAAACCAAA

Coding sequence (CDS) from alignment at sc0000563:40702..43239-

>TCONS_00026144 ID=TCONS_00026144|Name=TCONS_00026144|organism=Clytia hemisphaerica|type=CDS|length=6858bp|location=Sequence derived from alignment at sc0000563:40702..43239- (Clytia hemisphaerica)
CTTTGGAGAAGGAGTTAGATTACGCATTGGAACACAAGATTGCAGTATTC
ATGGTTGTGGCAGTGATTGGTTCAACAGAAGAAAGTGCCGTGGATGATAT
CGCAAGGATCTTGGCTCTCAAACCAAAAAATTCACCAGTGCAACTTGGCT
TACCAGAATTTTACCGACGACACAAGATAGGTGAACCAAGTGCAAAAGAT
GCAACGGTGCGAACATATCCACGAGTTTTTTCACCAGGAACGAACCATTA
TTCATGGCCGAAAGCTTCCACCATTCTTGGTATCGGTGATTCTAATAACA
TTCACATTCAAGTTGACAGCAAAGCTCGTCAAGATATCGAGAACGGTTTG
GAGTGCAAGGTATTTGTACCTGGCCAACAAAAAGAAAAGACTTTGACAGA
ATGCACCGAATGGGAATTGTTGAATTTGAGAATCGATGATATTTGTTCTT
TGACTGATGACGTCGTCAAATGTATCGAAGAGAGAAACCCGGATTTCAAA
ATTGACGTCAAAGCAACCATTGATAAAGCTTTGCAGGGTCACATGACATG
GGACGTGACAATGCCATCGTTCTTGGGATACGTATCCGGATTGCTTTGGA
ATCAAAACAACGTTGATTCAACTGCTTCACCAGTCACCACTAAGTTCGAA
GTAGAAGTTGGTCAACAACTCTGCAAATTGATGCGATTTGACGACACTAA
AGTCACACCATGGGGTCATTTAACAGGATGTGGATCTGTCGCTAATATTG
AATCGATGTGGGCTGCAAGAAACACCAAACTTCATCCATTGGCTTTGAAA
GATTCTTGCGCTGATACGGATTTCCCCGAATTAATAGCCCTGCTGGAGAC
AAATACGACCACCAATGGGAAGCTTTGGCTGGATGGTTTCTCGGACCACG
TGCAGAAAACCGAAACATTTTCAATGATTTGATGTTGAAAGCTTTAAATT
GGCATGAAGATCGACGTGAGGAATTCTTTCCAGCTGATCCTTCTTATTTC
ACGGAGGAGATCAAAAATTCTGAAGCTGCTCAACATGAGTATAAAGACAT
GGAAAAACAAATGAAAGAAATGCATCAAGAATTGAATAAATCCATTCCTT
TCTTCAGCACCAGATATCAGATGGCACAATCACTTCCATCAAACTTTGGA
GAAGGAGTTAGATTACGCATTGGAACACAAGATTGCAGTATTCATGGTTG
TGGCAGTGATTGGTTCAACAGAAGAAAGTGCCGTGGATGATATCGCAAGG
ATCTTGGCTCTCAAACCAAAAAATTCACCAGTGCAACTTGGCTTACCAGA
ATTTTACCGACGACACAAGATAGGTGAACCAAGTGCAAAAGATGCAACGG
TGCGAACATATCCACGAGTTTTTTCACCAGGAACGAACCATTATTCATGG
CCGAAAGCTTCCACCATTCTTGGTATCGGTGATTCTAATAACATTCACAT
TCAAGTTGACAGCAAAGCTCGTCAAGATATCGAGAACGGTTTGGAGTGCA
AGGTATTTGTACCTGGCCAACAAAAAGAAAAGACTTTGACAGAATGCACC
GAATGGGAATTGTTGAATTTGAGAATCGATGATATTTGTTCTTTGACTGA
TGACGTCGTCAAATGTATCGAAGAGAGAAACCCGGATTTCAAAATTGACG
TCAAAGCAACCATTGATAAAGCTTTGCAGGGTCACATGACATGGGACGTG
ACAATGCCATCGTTCTTGGGATACGTATCCGGATTGCTTTGGAATCAAAA
CAACGTTGATTCAACTGCTTCACCAGTCACCACTAAGTTCGAAGTAGAAG
TTGGTCAACAACTCTGCAAATTGATGCGATTTGACGACACTAAAGTCACA
CCATGGGGTCATTTAACAGGATGTGGATCTGTCGCTAATATTGAATCGAT
GTGGGCTGCAAGAAACACCAAACTTCATCCATTGGCTTTGAAAGATTCTT
GCGCTGATACGGATTTCCCCGAATTAATAGCCCTGCTGGAGACAAATACG
ACCACCAATGGGAAGCTTTGGCTGGATGGTTTCTCGGACCACGTGCAGAA
AACCGAAACATTTTCAATGATTTGATGTTGAAAGCTTTAAATTGGCATGA
AGATCGACGTGAGGAATTCTTTCCAGCTGATCCTTCTTATTTCACGGAGG
AGATCAAAAATTCTGAAGCTGCTCAACATGAGTATAAAGACATGGAAAAA
CAAATGAAAGAAATGCATCAAGAATTGAATAAATCCATTCCTTTCTTCAG
CACCAGATATCAGATGGCACAATCACTTCCATCAAACTTTGGAGAAGGAG
TTAGATTACGCATTGGAACACAAGATTGCAGTATTCATGGTTGTGGCAGT
GATTGGTTCAACAGAAGAAAGTGCCGTGGATGATATCGCAAGGATCTTGG
CTCTCAAACCAAAAAATTCACCAGTGCAACTTGGCTTACCAGAATTTTAC
CGACGACACAAGATAGGTGAACCAAGTGCAAAAGATGCAACGGTGCGAAC
ATATCCACGAGTTTTTTCACCAGGAACGAACCATTATTCATGGCCGAAAG
CTTCCACCATTCTTGGTATCGGTGATTCTAATAACATTCACATTCAAGTT
GACAGCAAAGCTCGTCAAGATATCGAGAACGGTTTGGAGTGCAAGGTATT
TGTACCTGGCCAACAAAAAGAAAAGACTTTGACAGAATGCACCGAATGGG
AATTGTTGAATTTGAGAATCGATGATATTTGTTCTTTGACTGATGACGTC
GTCAAATGTATCGAAGAGAGAAACCCGGATTTCAAAATTGACGTCAAAGC
AACCATTGATAAAGCTTTGCAGGGTCACATGACATGGGACGTGACAATGC
CATCGTTCTTGGGATACGTATCCGGATTGCTTTGGAATCAAAACAACGTT
GATTCAACTGCTTCACCAGTCACCACTAAGTTCGAAGTAGAAGTTGGTCA
ACAACTCTGCAAATTGATGCGATTTGACGACACTAAAGTCACACCATGGG
GTCATTTAACAGGATGTGGATCTGTCGCTAATATTGAATCGATGTGGGCT
GCAAGAAACACCAAACTTCATCCATTGGCTTTGAAAGATTCTTGCGCTGA
TACGGATTTCCCCGAATTAATAGCCCTGCTGGAGACAAATACGACCACCA
ATGGGAAGCTTTGGCTGGATGGTTTCTCGGACCACGTGCAGAAAACCGAA
ACATTTTCAATGATTTGATGTTGAAAGCTTTAAATTGGCATGAAGATCGA
CGTGAGGAATTCTTTCCAGCTGATCCTTCTTATTTCACGGAGGAGATCAA
AAATTCTGAAGCTGCTCAACATGAGTATAAAGACATGGAAAAACAAATGA
AAGAAATGCATCAAGAATTGAATAAATCCATTCCTTTCTTCAGCACCAGA
TATCAGATGGCACAATCACTTCCATCAAACTTTGGAGAAGGAGTTAGATT
ACGCATTGGAACACAAGATTGCAGTATTCATGGTTGTGGCAGTGATTGGT
TCAACAGAAGAAAGTGCCGTGGATGATATCGCAAGGATCTTGGCTCTCAA
ACCAAAAAATTCACCAGTGCAACTTGGCTTACCAGAATTTTACCGACGAC
ACAAGATAGGTGAACCAAGTGCAAAAGATGCAACGGTGCGAACATATCCA
CGAGTTTTTTCACCAGGAACGAACCATTATTCATGGCCGAAAGCTTCCAC
CATTCTTGGTATCGGTGATTCTAATAACATTCACATTCAAGTTGACAGCA
AAGCTCGTCAAGATATCGAGAACGGTTTGGAGTGCAAGGTATTTGTACCT
GGCCAACAAAAAGAAAAGACTTTGACAGAATGCACCGAATGGGAATTGTT
GAATTTGAGAATCGATGATATTTGTTCTTTGACTGATGACGTCGTCAAAT
GTATCGAAGAGAGAAACCCGGATTTCAAAATTGACGTCAAAGCAACCATT
GATAAAGCTTTGCAGGGTCACATGACATGGGACGTGACAATGCCATCGTT
CTTGGGATACGTATCCGGATTGCTTTGGAATCAAAACAACGTTGATTCAA
CTGCTTCACCAGTCACCACTAAGTTCGAAGTAGAAGTTGGTCAACAACTC
TGCAAATTGATGCGATTTGACGACACTAAAGTCACACCATGGGGTCATTT
AACAGGATGTGGATCTGTCGCTAATATTGAATCGATGTGGGCTGCAAGAA
ACACCAAACTTCATCCATTGGCTTTGAAAGATTCTTGCGCTGATACGGAT
TTCCCCGAATTAATAGCCCTGCTGGAGACAAATACGACCACCAATGGGAA
GCTTTGGCTGGATGGTTTCTCGGACCACGTGCAGAAAACCGAAACATTTT
CAATGATTTGATGTTGAAAGCTTTAAATTGGCATGAAGATCGACGTGAGG
AATTCTTTCCAGCTGATCCTTCTTATTTCACGGAGGAGATCAAAAATTCT
GAAGCTGCTCAACATGAGTATAAAGACATGGAAAAACAAATGAAAGAAAT
GCATCAAGAATTGAATAAATCCATTCCTTTCTTCAGCACCAGATATCAGA
TGGCACAATCACTTCCATCAAACTTTGGAGAAGGAGTTAGATTACGCATT
GGAACACAAGATTGCAGTATTCATGGTTGTGGCAGTGATTGGTTCAACAG
AAGAAAGTGCCGTGGATGATATCGCAAGGATCTTGGCTCTCAAACCAAAA
AATTCACCAGTGCAACTTGGCTTACCAGAATTTTACCGACGACACAAGAT
AGGTGAACCAAGTGCAAAAGATGCAACGGTGCGAACATATCCACGAGTTT
TTTCACCAGGAACGAACCATTATTCATGGCCGAAAGCTTCCACCATTCTT
GGTATCGGTGATTCTAATAACATTCACATTCAAGTTGACAGCAAAGCTCG
TCAAGATATCGAGAACGGTTTGGAGTGCAAGGTATTTGTACCTGGCCAAC
AAAAAGAAAAGACTTTGACAGAATGCACCGAATGGGAATTGTTGAATTTG
AGAATCGATGATATTTGTTCTTTGACTGATGACGTCGTCAAATGTATCGA
AGAGAGAAACCCGGATTTCAAAATTGACGTCAAAGCAACCATTGATAAAG
CTTTGCAGGGTCACATGACATGGGACGTGACAATGCCATCGTTCTTGGGA
TACGTATCCGGATTGCTTTGGAATCAAAACAACGTTGATTCAACTGCTTC
ACCAGTCACCACTAAGTTCGAAGTAGAAGTTGGTCAACAACTCTGCAAAT
TGATGCGATTTGACGACACTAAAGTCACACCATGGGGTCATTTAACAGGA
TGTGGATCTGTCGCTAATATTGAATCGATGTGGGCTGCAAGAAACACCAA
ACTTCATCCATTGGCTTTGAAAGATTCTTGCGCTGATACGGATTTCCCCG
AATTAATAGCCCTGCTGGAGACAAATACGACCACCAATGGGAAGCTTTGG
CTGGATGGTTTCTCGGACCACGTGCAGAAAACCGAAACATTTTCAATGAT
TTGATGTTGAAAGCTTTAAATTGGCATGAAGATCGACGTGAGGAATTCTT
TCCAGCTGATCCTTCTTATTTCACGGAGGAGATCAAAAATTCTGAAGCTG
CTCAACATGAGTATAAAGACATGGAAAAACAAATGAAAGAAATGCATCAA
GAATTGAATAAATCCATTCCTTTCTTCAGCACCAGATATCAGATGGCACA
ATCACTTCCATCAAACTTTGGAGAAGGAGTTAGATTACGCATTGGAACAC
AAGATTGCAGTATTCATGGTTGTGGCAGTGATTGGTTCAACAGAAGAAAG
TGCCGTGGATGATATCGCAAGGATCTTGGCTCTCAAACCAAAAAATTCAC
CAGTGCAACTTGGCTTACCAGAATTTTACCGACGACACAAGATAGGTGAA
CCAAGTGCAAAAGATGCAACGGTGCGAACATATCCACGAGTTTTTTCACC
AGGAACGAACCATTATTCATGGCCGAAAGCTTCCACCATTCTTGGTATCG
GTGATTCTAATAACATTCACATTCAAGTTGACAGCAAAGCTCGTCAAGAT
ATCGAGAACGGTTTGGAGTGCAAGGTATTTGTACCTGGCCAACAAAAAGA
AAAGACTTTGACAGAATGCACCGAATGGGAATTGTTGAATTTGAGAATCG
ATGATATTTGTTCTTTGACTGATGACGTCGTCAAATGTATCGAAGAGAGA
AACCCGGATTTCAAAATTGACGTCAAAGCAACCATTGATAAAGCTTTGCA
GGGTCACATGACATGGGACGTGACAATGCCATCGTTCTTGGGATACGTAT
CCGGATTGCTTTGGAATCAAAACAACGTTGATTCAACTGCTTCACCAGTC
ACCACTAAGTTCGAAGTAGAAGTTGGTCAACAACTCTGCAAATTGATGCG
ATTTGACGACACTAAAGTCACACCATGGGGTCATTTAACAGGATGTGGAT
CTGTCGCTAATATTGAATCGATGTGGGCTGCAAGAAACACCAAACTTCAT
CCATTGGCTTTGAAAGATTCTTGCGCTGATACGGATTTCCCCGAATTAAT
AGCCCTGCTGGAGACAAATACGACCACCAATGGGAAGCTTTGGCTGGATG
GTTTCTCGGACCACGTGCAGAAAACCGAAACATTTTCAATGATTTGATGT
TGAAAGCTTTAAATTGGCATGAAGATCGACGTGAGGAATTCTTTCCAGCT
GATCCTTCTTATTTCACGGAGGAGATCAAAAATTCTGAAGCTGCTCAACA
TGAGTATAAAGACATGGAAAAACAAATGAAAGAAATGCATCAAGAATTGA
ATAAATCCATTCCTTTCTTCAGCACCAGATATCAGATGGCACAATCACTT
CCATCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014697XLOC_014697Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026144-proteinTCONS_00026144-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026144-exon-sc0000563-1575043694:43077..43239TCONS_00026144-exon-sc0000563-1575043694:43077..43239Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1575043694:42624..42906TCONS_00026144-exon-sc0000563-1575043694:42624..42906Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1575043694:42110..42410TCONS_00026144-exon-sc0000563-1575043694:42110..42410Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1575043694:41683..41876TCONS_00026144-exon-sc0000563-1575043694:41683..41876Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1575043694:41071..41287TCONS_00026144-exon-sc0000563-1575043694:41071..41287Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1575043694:40702..40828TCONS_00026144-exon-sc0000563-1575043694:40702..40828Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1510915933:43077..43239TCONS_00026144-exon-sc0000563-1510915933:43077..43239Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1510915933:42624..42906TCONS_00026144-exon-sc0000563-1510915933:42624..42906Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1510915933:42110..42410TCONS_00026144-exon-sc0000563-1510915933:42110..42410Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1510915933:41683..41876TCONS_00026144-exon-sc0000563-1510915933:41683..41876Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1510915933:41071..41287TCONS_00026144-exon-sc0000563-1510915933:41071..41287Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1510915933:40702..40828TCONS_00026144-exon-sc0000563-1510915933:40702..40828Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1491911889:43077..43239TCONS_00026144-exon-sc0000563-1491911889:43077..43239Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1491911889:42624..42906TCONS_00026144-exon-sc0000563-1491911889:42624..42906Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1491911889:42110..42410TCONS_00026144-exon-sc0000563-1491911889:42110..42410Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1491911889:41683..41876TCONS_00026144-exon-sc0000563-1491911889:41683..41876Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1491911889:41071..41287TCONS_00026144-exon-sc0000563-1491911889:41071..41287Clytia hemisphaericaexon
TCONS_00026144-exon-sc0000563-1491911889:40702..40828TCONS_00026144-exon-sc0000563-1491911889:40702..40828Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000563supercontigsc0000563:40702..43239 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
887.971	932.684	622.356	545.716	1.63273	0.920521	0.440041	0.556696	0.764556	0.890266	1.14068	0.336928	0.231552	0.3198	0.0863875	0.0680903	0.139465	0.0888792	0.0706087	0.272646	1.29997	1.11144	334.921	316.76	0.307763	0.15797	13.0605	13.8926	236.651	281.809
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002129PyrdxlP-dep_de-COase
IPR015421PyrdxlP-dep_Trfase_major_sub1
IPR015424PyrdxlP-dep_Trfase
Vocabulary: Molecular Function
TermDefinition
GO:0016831carboxy-lyase activity
GO:0030170pyridoxal phosphate binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019752 carboxylic acid metabolic process
molecular_function GO:0016831 carboxy-lyase activity
molecular_function GO:0003824 catalytic activity
molecular_function GO:0030170 pyridoxal phosphate binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026144 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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