TCONS_00026100 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026100
Unique NameTCONS_00026100
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length423

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026100 ID=TCONS_00026100|Name=TCONS_00026100|organism=Clytia hemisphaerica|type=transcript|length=423bp
GATAAAGTTGACCTGAGATTTTCGTGGATTCAATTTTCTTGAACCCTGAC
TATTTGGTTGTTTACATGTGGTTGTGATGCTAAATGAAGCATTAGTATGG
AATCTTTTACGATCGTAGTTCCACCACTTAAACCAGTGATCACTTTCCAG
GTATATTATTCTATAATctgtttcactttcgttttcgtattGCTGTGATT
ACACACCCCTTTTTTGAGTATGATTTTTAGAGGTTTGGGGAGATTTGTTA
TTGATACCTAGGCCTTTTGTCGAGAGACACTTTTTCAACGCAATTTTAGT
TAGGATTTTAGATTGTATTACATTTTagagtttttgataaaattttcttt
ccctGCATGATAAAGCATGcacttttttgatgaaatttcatcTTTATCAA
CAGTTTCTCTCCTTCACTAAACG
Run BLAST on NCBI

transcript from alignment at sc0000562:15425..15847-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026100 ID=TCONS_00026100|Name=TCONS_00026100|organism=Clytia hemisphaerica|type=transcript|length=423bp|location=Sequence derived from alignment at sc0000562:15425..15847- (Clytia hemisphaerica)
GATAAAGTTGACCTGAGATTTTCGTGGATTCAATTTTCTTGAACCCTGAC
TATTTGGTTGTTTACATGTGGTTGTGATGCTAAATGAAGCATTAGTATGG
AATCTTTTACGATCGTAGTTCCACCACTTAAACCAGTGATCACTTTCCAG
GTATATTATTCTATAATCTGTTTCACTTTCGTTTTCGTATTGCTGTGATT
ACACACCCCTTTTTTGAGTATGATTTTTAGAGGTTTGGGGAGATTTGTTA
TTGATACCTAGGCCTTTTGTCGAGAGACACTTTTTCAACGCAATTTTAGT
TAGGATTTTAGATTGTATTACATTTTAGAGTTTTTGATAAAATTTTCTTT
CCCTGCATGATAAAGCATGCACTTTTTTGATGAAATTTCATCTTTATCAA
CAGTTTCTCTCCTTCACTAAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014674XLOC_014674Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026100-exon-sc0000562-1575043694:15425..15847TCONS_00026100-exon-sc0000562-1575043694:15425..15847Clytia hemisphaericaexon
TCONS_00026100-exon-sc0000562-1510915933:15425..15847TCONS_00026100-exon-sc0000562-1510915933:15425..15847Clytia hemisphaericaexon
TCONS_00026100-exon-sc0000562-1491911889:15425..15847TCONS_00026100-exon-sc0000562-1491911889:15425..15847Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000562supercontigsc0000562:15425..15847 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0937921	0.28373	0.922561	1.43719	0	0.176667	0	0	0.0951601	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026100 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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