TCONS_00025976 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025976
Unique NameTCONS_00025976
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length299

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025976 ID=TCONS_00025976|Name=TCONS_00025976|organism=Clytia hemisphaerica|type=transcript|length=299bp
CAGCGTATTTCGATACAGAAGGGAGggggtaaaatcttttttttattaga
agcTGGACATGCTACTGCTCCCTTTAGCCGTAAACCAGCTGCATTTTTCT
AAATCAGATGCGCCAGATGAGACCAAAATGAAAGGGAGCTATCAGCTTTT
CAACGAGATTCTATTTTTTCTAGAATACGAGATATGATGATTTAAACTAC
GAGCTTAAAAAATGCTTAGACAAGAAACTTAAAGGGTTGAGAAATTTTTA
TAGTatatttctaaaagaaaaaagaagctcgggctttacacttttttta
Run BLAST on NCBI

transcript from alignment at sc0000556:65372..65670

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025976 ID=TCONS_00025976|Name=TCONS_00025976|organism=Clytia hemisphaerica|type=transcript|length=299bp|location=Sequence derived from alignment at sc0000556:65372..65670 (Clytia hemisphaerica)
taaaaaaagtgtaaagcccgagcttcttttttcttttagaaatatACTAT
AAAAATTTCTCAACCCTTTAAGTTTCTTGTCTAAGCATTTTTTAAGCTCG
TAGTTTAAATCATCATATCTCGTATTCTAGAAAAAATAGAATCTCGTTGA
AAAGCTGATAGCTCCCTTTCATTTTGGTCTCATCTGGCGCATCTGATTTA
GAAAAATGCAGCTGGTTTACGGCTAAAGGGAGCAGTAGCATGTCCAgctt
ctaataaaaaaaagattttaccccCTCCCTTCTGTATCGAAATACGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014613XLOC_014613Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025976-exon-sc0000556-1491911889:65372..65670TCONS_00025976-exon-sc0000556-1491911889:65372..65670Clytia hemisphaericaexon
TCONS_00025976-exon-sc0000556-1510915933:65372..65670TCONS_00025976-exon-sc0000556-1510915933:65372..65670Clytia hemisphaericaexon
TCONS_00025976-exon-sc0000556-1575043694:65372..65670TCONS_00025976-exon-sc0000556-1575043694:65372..65670Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000556supercontigsc0000556:65372..65670 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025976 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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