TCONS_00025932 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025932
Unique NameTCONS_00025932
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1788

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025932 ID=TCONS_00025932|Name=TCONS_00025932|organism=Clytia hemisphaerica|type=transcript|length=1788bp
CGTGTTTCAAGAGTGGTTAACATATTCACATCTCATGTACCAACATCGAG
TCAAGCTTCAGCAAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATT
TTCACCGATATGAAGAGATTTGTCCTGATTTCAACTGGTTATCTAAAGAG
GCGTTACCATGGTTTCAACTTGCCAATCACACTGATCCAACTCGTGGGAT
CGTTCACAATCTAGTCATCAAGCCTGTGTACCAATTCAGTATTATAACAC
TTCAGacacaaaacaaaaaagctGATTTGAAGCAATCTGGAGGTGACCAT
TGGCGTGTCCAAATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAA
AATAGATCATCGCAACGGCTCTTATGAATTTCGATTCGTTCCTGTAGTAT
CCGGTACATATCAAGCGCTCATATGGTTGGAATATACACTATGTGCAGGG
CTGAAGGAACCACCACCTGATTGGTTCATAAAGGGAACAGTACAAGGGAA
AGAACAAAAGCAAGGTTCATTGCATAGAGATTCTCCTTTCATCAACAAAC
CATTATGGTCTGGTGCCAAGTTTCAGTTCTATGTTCCACCACCAGCAAAA
AAGCAAGCACTTCAAGAACATTCAACATCTAACTGCAAATCTCAAGGGTG
TCAATTTCTTTGGAATGGTTTTGGAAACTGGTTGAACAAGACACATTGGG
TGCCTCGATGTCCCCATTCCACGGAATTGCGCTATCCCAAGGAACATCCG
CGTAGAGGTCTTTTATGGATTTTTGGTGATTCTGTATCATCACAGTTTTA
CCACCAAATCAAGTTTCATCCTTTATGTCAACATCATTTCGCACGATGCA
TGTATTCATACAACTGGCTCTACAGCTTGGAGAACTATAACGCGTCCTTG
GGAAGgtaCACGCGTAGAAACACTACCATCGAAAAGACAACTTGGGACGA
CCTTGATTACAGTGTGAATCGTACGGTTGCCGAACTCAGACAAGTTCTCC
TTCACCCTGGAATGCAATCTAGAGAAAGCGTACTTTTGCTAAATTACGGT
CTGCATTTTACCGAGTCATTAAATTACACGAACTACAAAACAGCTATCGA
ATCGGTGATTGACGTATTAAAACGTGAAGCATATTGTCATGTTGTATGGC
GCACAACGACCTCTTTGAACCGTCACAAATATTCACAACCGAACTTACAT
TCTAGGAGATTCATGACATCGCCGagaGTCGAATTATACAATGCATATGC
AGCGAGCAGATTTTGTGAAGAGAACTTCGACGTTCTAGATGTTTACCCGC
TGACTGATTCGTACCCTGAGGGGACTGGATCGAGTAAAACTCCTCACGAC
CCAGTCCACTATGAGTATCACGTGATGCACCCGATGGAAAAACTATTGGA
ACGCGTTTTTAAGATCAAATGAAGCTTGAAGTTGGATTCAAGGAGGCCAT
TAGAGAAGcGTTGCCATGGTATTTCATCTATACTTGAATCGACTCCCGTG
AACTTATCTGGACAGTTGTATCAAATTGTGTATAATTGAATATTGCGAAC
aaaatcgtaaacaaaggataTCGCTCCCTGTGCAAGgagatttgattttt
cttctttgaaagaaaaaaatgttttagacGTCAAAAATATGATGGTGTGA
CAGattgaaaacaattttcgaaaattaattaattaattaataataAGGAT
ATTTTGACGTTTATTCATCTAAAATAATCTTTGATTTTCGATATCTGAAA
TTTTCGAGCAGTATTTTGTTGGCAAGAAACAGGTGCGG
Run BLAST on NCBI

protein sequence of TCONS_00025932-protein

>TCONS_00025932-protein ID=TCONS_00025932-protein|Name=TCONS_00025932-protein|organism=Clytia hemisphaerica|type=polypeptide|length=473bp
RVSRVVNIFTSHVPTSSQASARYWEEWNQWRVDFHRYEEICPDFNWLSKE
ALPWFQLANHTDPTRGIVHNLVIKPVYQFSIITLQTQNKKADLKQSGGDH
WRVQIKGPYSASSLVRKIDHRNGSYEFRFVPVVSGTYQALIWLEYTLCAG
LKEPPPDWFIKGTVQGKEQKQGSLHRDSPFINKPLWSGAKFQFYVPPPAK
KQALQEHSTSNCKSQGCQFLWNGFGNWLNKTHWVPRCPHSTELRYPKEHP
RRGLLWIFGDSVSSQFYHQIKFHPLCQHHFARCMYSYNWLYSLENYNASL
GRYTRRNTTIEKTTWDDLDYSVNRTVAELRQVLLHPGMQSRESVLLLNYG
LHFTESLNYTNYKTAIESVIDVLKREAYCHVVWRTTTSLNRHKYSQPNLH
SRRFMTSPRVELYNAYAASRFCEENFDVLDVYPLTDSYPEGTGSSKTPHD
PVHYEYHVMHPMEKLLERVFKIK
Run BLAST on NCBI

transcript from alignment at sc0000555:187565..196679+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025932 ID=TCONS_00025932|Name=TCONS_00025932|organism=Clytia hemisphaerica|type=transcript|length=9115bp|location=Sequence derived from alignment at sc0000555:187565..196679+ (Clytia hemisphaerica)
CGTGTTTCAAGAGTGGTTAACATATTCACATCTCATGTACCAACATCGAG TCAAGCTTCAGCAAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATT TTCACCGATATGAAGAGATTTGTCCTGATTTCAACTGGTTATCTAAAGAG GCGTTACCATGGTTTCAACTTGCCAATCACACTGATCCAACTCGTGGGAT CGTTCACAATCTAGTCATCAAGCCTGTGTACCAATTCAGTATTATAACAC TTCAGacacaaaacaaaaaagctGATTTGAAGCAATCTGGAGGTGACCAT TGGCGTGTCCAAATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAA AATAGATCATCGCAACGGCTCTTATGAATTTCGATTCGTTCCTGTAGTAT CCGGTACATATCAAGCGCTCATATGGTTGGAATATACACTATGTGCAGGG CTGAAGGAACCACCACCTGATTGGTTCATAAAGGGTATGAATCTTATTAA ATTTctggtttttctttttgaggCTTAATTGGTGACTTCCAGGGTATGAT CTGGGTAGTTTATGAAATGTTGAGTATTGACTGTATACTAATGTCAAATT CTTTCGCGAAATGGCTCATTCAACTatatttcgcgaaaattaacgTTCGT GAATAACATATTAGACCATAATTTCGCGAGAATTAACTTACACCTATCTT TATAACATCACCAGAGAGAAATGCATTATTAAAGCAAGATACATTTTATA GGGGGCtgaccaattttttttaatttaagtgAAGAAATTACGTATTTCGC CGGAATTAACTTTCCCGAATAACaatttgaccatattttgcGAATATTAG CTTTATATATATTTACCTTTGACATATTTCGCGGAACTTAATATTCGCAA TTTGGCCGAAAAATCGCGAActtgcgaaagtttcttctTTTAAAGTATTG TGATAAATGGTCCATCCGAACCGAATCTTAGTTGGATCACTGAtatcggg gaaaccggttctTTACCTGTTGTCGTTGTCTATTTTTCAGGAACAGTACA AGGGAAAGAACAAAAGCAAGGTTCATTGCATAGAGATTCTCCTTTCATCA ACAAACCATTATGGTCTGGTGCCAAGTTTCAGTTCTATGTTCCACCACCA GCAAAAAAGCAAGGTAAATTTCGTTTTTGGTCGTATTCATTTTTTGTCTG GACATTGCACCGTTTATGTTTTCTATGTAATCTTTTTCAGATCCAGCGGT GAGATGCAAATATACCTAcagtaccgggtgcgccacaaaaaagtttctct cttcaTATTCCTTTCAAGTTTCAATTATTTTCCGTATTTGCACCTAAATT TTACAAaacctttttaattttatcCCTTCTCTGAATGTCACTTCCTAGGG AGGGTACCCATTTTTCCATATTCACACATCCACAAGCAGCATTAGGATAA CGATCACAAATTTCCCGAAATATCACACCATTCTCAATCCCTTTGGGAGC AATCCTGAAGTGATGGTCCATGATGGGATATTTtataaaacacacaaaaa agtttctctctttgaaactgattttttcgaaatctaagaATTAAGAAACA ACAATTCCTATTCCATCAGAAAGAAGatatataaacttaaattttgatgg ttcatttattaaattcggttcattgaatcaaaagttatgctcaattgaat aaaaaagttactttcagaaagtgcccgaaaacgttaaaaatcgacctatt aatcttttattttaaaattggcaatcgcaagaggctttacatgattaaga ccATTTTTTCtgtaattaaacacataaattttgaaactgattgaacgaaa gggtttaaaatgttcattaaaatcattcCAATTTACTTTTAACGAAATCT TCcacagatttttggttctagactagataaagtctatgtaaggctggatg tNNNNNTGAAACTGATTgaacgaaagggtttaaaatgttcattaaaatca ttcCAATTTACTTTTAACGAAATCTTCcacagatttttggttctagacta gataaaaagttgtaaggctggatgtacctcgaaacccatatttgatgtat ttttttaaactttaccagattttttggcttttttcgacgaatcttctgcc ttttattgaaattcaatttccctttatataacaaacggtcaattagacag ctaattatcatttttaatgactgaaacgaaaatactgatgcatcatgtta ttatgcttctgtttaatttgataggtcgatttttaacgtttttgagcact ttcagaaagtaacttttttattcaatagagaGCATAAatttcgatctaat gaaccgaatttaataaatgacccatcaaaagtTAAGTTTATATATCTTCT TTCCAATTGAATAGGAAtggtttttttaaaaattttagatttcgggaaaa ttagttttaaagagagaaacttatttgtggcgcacccgatatatttttaa cattattaACCAACcctattttttccaaatattcCTTAGCACTTCAAGAA CATTCAACATCTAACTGCAAATCTCAAGGGTGTCAATTTCTTTGGAATGG TTTTGGAAACTGGTTGAACAAGACACATTGGGTGCCTCGATGTCCCCATT CCACGGAATTGCGCTATCCCAAGGAACATCCGCGTAGAGGTAAACTAACT CTTTCTAGCCTCGTTTGTTGTTAAAGGCTGTATCTTTAAATCTTTAACCC ATTAAATGCCATCTCTTCGtgacttcaaattttctaaTATTTGTGCATAC ATACCCCAACTAAGAAAAATGATGCCAAATCTCCTACTCATTAACCGATT TGGGCTTTGACCTTGCAACTTTTGAATTGAACTACCATGACACTAAATTC TATAATGCAGTGAGACAATATACAATCTTCACACTTTTTATAAGGAAAGA CTCGGGGGATCAAATTTGATCTCGTAATATAAAAGGATTTTTTGGATAAT CTTACCATGGaaaacgatagcccttgaccctctaagcataaatatggtat aatatcaggggtgatcaaaggaaaatttttccgaaaatgaTCAGGGCTTA TCCGAAAATTGAGgttgctttttaaaaaatgtgtatatgCGTTATCATTA GTAACCTTAAATTATGATATCTTTTCTGTGCAGGTCTTTTATGGATTTTT GGTGATTCTGTATCATCACAGTTTTACCACCAAATCAAGTTTCATCCTTT ATGTCAACATCATTTCGCACGATGCATGTATTCATACAACTGGCTCTACA GCTTGGAGAACTATAACGCGTCCTTGGGAAGGTACGTATTGTGTTTCggt aaaaccttttttttcgCATTATGTatttgggctcttccagaaaaaaaatt taatatatgggggggtggaagatataacatcaccccccggacaagcttca gttgaccccccggacatttAGAATCACCCATAATCAGCAAGTTTGCAcct aaaacaaggcaaattttgcagatttttcactaccccttGGACCCCaccca tgtacaaaaattttctggaagagccctttCTTTATGGAGCGACGATCGAC TTCAAATGTTCCGTTCACTTGATATATAAAAGGTGATTCACAAAAAGAGG ACCGCACTTTAGAATTTTTGCCGTAACCTTTTTTCtggtttctgtttttt tttcttttttgtatgaATATGAATTTTTAACACTTCTCTTCCCTGGCTAG TTTGGGTATGAGTCTTTAAGATATTATGGTTTTATATTGAACAGAGAAAA AGCTACCTCAAAGAGCCTAGAAGTTTGGTTTTAAAAATCCTGTAAAGGCG TTTTCTGTACACAAGCCCAGTATATGTGGCttatatcaaaattcattgta ctacgaagcgataaacgtgagttACACTCTGGTATAGAATGTGTAAGGTG TCGAACTGCTCTAGAAAGCTAAAAAATACAGTGATTgtaattttgaagtt ttgtcCGTGTACCTAGctttgcttataagaaaatgacTTGATTAGTAAtt ataatcttaatttttcaggtaCACGCGTAGAAACACTACCATCGAAAAGA CAACTTGGGACGACCTTGATTACAGTGTGAATCGTACGGTTGCCGAACTC AGACAAGTTCTCCTTCACCCTGGAATGCAATCTAGAGAAAGCGTACTTTT GCTAAATTACGGTCTGCATTTTACCGAGTCATTAAATTACACGAACTACA AAACAGCTATCGAATCGGTGATTGACGTATTAAAACGTGAAGCATATTGT CATGTTGTATGGCGCACAACGACCTCTTTGAACCGTCACAAATATTCACA ACCGAACTTACATTCTAGGAGATTCATGACATCGCCGGTAAGATTCATAA ATAATTGCTCCTGATCAATTACCACTGCGGACAATCGTGTGACTAAAATG AAATATTAGACTTCCACGTAGCTCCTCCAACATTTTGCGTGATCGCTACT ATTTTCTTGCGCGATGGCGTTTTTTTCGTGAACGTGATGAGAACCAAGAA TTCGCCCAGATGAGGGGTGCCNGATCCACGACTTTTATGTTTTTTCGCCG AAcgttaaagaacatttttttttcgtgaaCGTGATGAGAGCTTAGAATTT GCCCAGATGAGAGGTGCCTCTGACGGGATGATGGGCTCTTCTGCTCATTT TTCTCGTAACTAGCTTAAGAAGATTAATTTTCAAAGTTGTTTAGTATAAT ATATACACCACCTTGAaaaactttacttttcttttttagagaGTCGAATT ATACAATGCATATGCAGCGAGCAGATTTTGTGAAGAGAACTTCGACGTTC TAGATGTTTACCCGCTGACTGATTCGTACCCTGAGGGGACTGGATCGAGT AAAACTCCTCACGACCCAGTCCACTATGAGTATCACGTGATGCACCCGAT GGAAAAACTATTGGAACGCGTTTTTAAGATCAAATGAAGCTTGAAGTTGG ATTCAAGGAGGCCATTAGAGAAGGTATGTTCActtttcttcatcagtttt aTTCCCGAAACTCCATGAAATGGGGTAGTGGCAAGTGAACCTTGCTTATT TACCGctatctttccaatatttcaCTTAACATTTGAGAGAACAGGACATT CGATATGTTATGAGATTTCTTcgccaatagaccttttcataaattacgtt acgaacatcacttgcctcgttttgaaattattgccatggtgattaactcc tagcgtattttattaaaactactttctatttataaaaaaaaatcatttaa tgtctcaagagacataatcaccatagCAATAATtccaaaacgaggcaagt gatgttcgtgacgtaatttatgaaaaggtctattgaagtTCCTCGGACAC TAGACACGAAGAAACTACTCAACAAAGAATACGTTATCGTTTACTCTACA TGCACCAAAACATTGAAAGGGAAGCTTTATAGCTGGGAggaatctgtttt tttttttgaagtggaTGTTACCAACAATTTTACTTGTTTTACTTGTTATA TTTTTTCTCATAATATATTTCGAGATATACTTCTCATCTTCAGGTTATtt ctaaaacaaaatataaaaacagtTTAAAAACAGTATcatacaaaatagaa aattcactTCGTGAAATTCACCTCTACATACAAATTCATACAAGTAGTAA TGGCTACAGTAAAAGAGGCCctaaagcggttttcgtgatgacgtGTAGGA ACTTTTTTGCAGCGTGATtgtgtgatttgaaaattttttcttcgtgattg aTCTTAATTTGAAGGATTTTTGAGCCGTGGAGGGATACGTgattatgatt ttttcaaatgcGTGATTGTCAATTTTTGTTGCTGATTTgtgtgatcgtga ttgaagacaaaaagttgcatgatatcgtgatcagagttaccacTGGGGGG GGCGAAAAGATGGAACAGTCTATGGAAATAATTGTATTTTACGACCAGTG TACGACTTTTATATTCATCTTTTGTGTTTAAGTCGGGTTTGAGGTCTTTT GAGTTTGATGTGTTTCTTCATTTATTTTAGGTCAAAAAGGGGATCACTTA TCTTAATAgcgaaatcatcaaaagtaaCTTGATCTAAGTGCTAATGAATT CTGAATAGAAAAACAACTTGAACGATTAATAACtctccttttcttttctt tatgatttttttagacACTAGTTTTGAGGTGTATTCGCactgaaagtttc aagctaATGGCCTTAACGTGtctaaatcaaaaaaatattttgttgataGA ATGATGAAAGTCTAGAAAAGAACAGAATTTTTACAACTTTGTTGCTGATG TACGtaggcgcagtagtgtagtggtcatcgttCTTGGCCTCCGTGCTGGA GGTCAAGGTTCGATCCCACTCGGtgctacgattcacttggcaagtgaatg taccttaaCCCGGGACCTCCCGAGacccccggggggtactagggttgcga gctgacgggaggggtgccgcccgactttcgaaatttggacccttaccagg actaaaaaggacaaaacaaaggaaaattttgggaattttacgacccttag cgggacaaatttgcccaattttgaccaaatttcgatctttcagggactaa aaaggtgaaattttcctattttccgacccttagcgggacaaatttgccca attttgaccaaatttcgatctttcagggactaaaaaggtgaaattttcct attttccgacccttagcgggacaaatttgcccaattttgaccaaatttcg atctttcagggactaaaaaggtgaaattttcctattttccgacccttagc gggacaaatttgaccaattttgaccaaatttcgatctttcagggactaaa aagttgaaattttcctattttccgacccttagtgggactgaaatttgatt ttctgatttttccgacccttagcgggactttggaagttacccttaagggc ggcacatactgtaccttccatttgcctaagtacaccCCCCACCCGGGACC TTgacccgggtcaacccataccatgtgatgggaatagggtaccatcactc tgatacaagagtatggggagtTATGCCGGACATTGAATGTGGTGTGGTGA TGGTACTCATATGTTCAGTACCTGCGAGAACGCAAGGTTTTCCCGTACTG TGCGAGTACCACCATCGATACAGCACGGCTCTGTTGTGCCGCGAGCACAG AGTTcaatgtctggtaagcgctgtgattttcctatctaggggtaggaaac tatcccgggatagagcccggtccgatgatatcggagggtcCGCTTCTCTT CTCTGTTGCTTATGTACGTGAAACGTTCAAGCGAAAGTATTACCGTTGAC GTtatcactttttaaaattttgtatcaatttttcaaattgacattgtcaa tgcctatcacatgtcaaaatttgaaaatgattggataaatagttcagaag ttatcagcactttacaattttgagttttaagctattttagctTGGTTTTA TGTcgtgtttcacaataaagtcgtAAAACCTGATCTAGAGAACCTATGGA CCCCAAAAATATGCACAATTATCTTAGTAAGATTTTActaaaagtcagaa aatttcaaatcttttcaaaaattgttcttcgagatatacacaaaaagaac accagcgtggtagattctaccccctcccccttgggCTACTGATAGGGTTA ACATAGTTATTTCCAAACGAATCTCATGGCTTTTTCCCGATTACTATCAA TTATCCCCGTTTCGACTTATTCACCCGATTTGTGAGTACGAAAAAAACGA CGGTCTCTACTACTTAATGACGTAGAATATCAACAGGCAAAGGCTtaact aaaaatgtttttttttaccccagcaataattttgataaaattttaattaa taaatttttctaCTTGAAATTGATAAATAATTCATTCCAATATCAAAAGA ACTCGTCAAAATCACCTGTTTCGGTATCAAAAATATTACagcttgatttt aatttttaattaattttaaatgtttttctatCCAATTCGATATTCCTTTT TACGGGTTGGGCGTTAATCTCTTCAAAAAGTGTATTTGATGAAATAAGAA TATCTGTCCAAATATATTcgctcaggagatttgggtagCATACACATACA CATTTCGTCCTTGTTGGGACTCATCAGCACTGCGTACTGCGCCCTGCCTG GCTAGCCAGATTGATTTGCTATGTATATTCAACTGCCACATAGATTCTTG TTTTCAGTAAAACTGAATTTATTAAGAAAAGGTGACTTTCTAAAAGTCGC CTGAGCAGTGATTAGTAGGGCAGGCATTTGTTTGATTTGGGCGTAGTTTT GCGATAACagtaaatcaaaatttaattttgcaagaTTTGAATAGGTTGAG TCAAATGAATGAAGAACTAGTTTCACCCATTTTTAGCTATTTTCAGTTAT TTAAAGCTCTGGGAATTCCTCGATCAAAATATACAACGCGTGTTCAAATT TCTTAACGTCTCAGATGGATTTTTCTGctcagaaaaatgtaaaaagggGT TTTCCGTATCAAACTTTAATATCTGAACATGACTTAAATACAACGTTGTT TAAATGTCAATTCACTTCTGGCACAAATAATTTCATTAGTTACTCATATG TTTACAATATTTCTTCCTTTCCGGGGTACATCTGATCCTGTAAACAAAAC CCAATCAATTAATcattaattttctatttttatagcGTTGCCATGGTATT TCATCTATACTTGAATCGACTCCCGTGAACTTATCTGGACAGTTGTATCA AATTGTGTATAATTGAATATTGCGAACaaaatcgtaaacaaaggataTCG CTCCCTGTGCAAGgagatttgatttttcttctttgaaagaaaaaaatgtt ttagacGTCAAAAATATGATGGTGTGACAGattgaaaacaattttcgaaa attaattaattaattaataataAGGATATTTTGACGTTTATTCATCTAAA ATAATCTTTGATTTTCGATATCTGAAATTTTCGAGCAGTATTTTGTTGGC AAGAAACAGGTGCGG

Coding sequence (CDS) from alignment at sc0000555:187565..196679+

>TCONS_00025932 ID=TCONS_00025932|Name=TCONS_00025932|organism=Clytia hemisphaerica|type=CDS|length=8532bp|location=Sequence derived from alignment at sc0000555:187565..196679+ (Clytia hemisphaerica)
CGTGTTTCAAGAGTGGTTAACATATTCACATCTCATGTACCAACATCGAG
TCAAGCTTCAGCAAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATT
TTCACCGATATGAAGAGATTTGTCCTGATTTCAACTGGTTATCTAAAGAG
GCGTTACCATGGTTTCAACTTGCCAATCACACTGATCCAACTCGTGGGAT
CGTTCACAATCTAGTCATCAAGCCTGTGTACCAATTCAGTATTATAACAC
TTCAGacacaaaacaaaaaagctGATTTGAAGCAATCTGGAGGTGACCAT
TGGCGTGTCCAAATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAA
AATAGATCATCGCAACGGCTCTTATGAATTTCGATTCGTTCCTGTAGTAT
CCGGTACATATCAAGCGCTCATATGGTTGGAATATACACTATGTGCAGGG
CTGAAGGAACCACCACCTGATTGGTTCATAAAGGGAACAGTACAAGGGAA
AGAACAAAAGCAAGGTTCATTGCATAGAGATTCTCCTTTCATCAACAAAC
CATTATGGTCTGGTGCCAAGTTTCAGTTCTATGTTCCACCACCAGCAAAA
AAGCAAGCACTTCAAGAACATTCAACATCTAACTGCAAATCTCAAGGGTG
TCAATTTCTTTGGAATGGTTTTGGAAACTGGTTGAACAAGACACATTGGG
TGCCTCGATGTCCCCATTCCACGGAATTGCGCTATCCCAAGGAACATCCG
CGTAGAGGTCTTTTATGGATTTTTGGTGATTCTGTATCATCACAGTTTTA
CCACCAAATCAAGTTTCATCCTTTATGTCAACATCATTTCGCACGATGCA
TGTATTCATACAACTGGCTCTACAGCTTGGAGAACTATAACGCGTCCTTG
GGAAGgtaCACGCGTAGAAACACTACCATCGAAAAGACAACTTGGGACGA
CCTTGATTACAGTGTGAATCGTACGGTTGCCGAACTCAGACAAGTTCTCC
TTCACCCTGGAATGCAATCTAGAGAAAGCGTACTTTTGCTAAATTACGGT
CTGCATTTTACCGAGTCATTAAATTACACGAACTACAAAACAGCTATCGA
ATCGGTGATTGACGTATTAAAACGTGAAGCATATTGTCATGTTGTATGGC
GCACAACGACCTCTTTGAACCGTCACAAATATTCACAACCGAACTTACAT
TCTAGGAGATTCATGACATCGCCGagaGTCGAATTATACAATGCATATGC
AGCGAGCAGATTTTGTGAAGAGAACTTCGACGTTCTAGATGTTTACCCGC
TGACTGATTCGTACCCTGAGGGGACTGGATCGAGTAAAACTCCTCACGAC
CCAGTCCACTATGAGTATCACGTGATGCACCCGATGGAAAAACTATTGGA
ACGCGTTTTTAAGATCAAATGACGTGTTTCAAGAGTGGTTAACATATTCA
CATCTCATGTACCAACATCGAGTCAAGCTTCAGCAAGATATTGGGAAGAG
TGGAACCAATGGCGTGTCGATTTTCACCGATATGAAGAGATTTGTCCTGA
TTTCAACTGGTTATCTAAAGAGGCGTTACCATGGTTTCAACTTGCCAATC
ACACTGATCCAACTCGTGGGATCGTTCACAATCTAGTCATCAAGCCTGTG
TACCAATTCAGTATTATAACACTTCAGacacaaaacaaaaaagctGATTT
GAAGCAATCTGGAGGTGACCATTGGCGTGTCCAAATCAAAGGACCCTACT
CCGCATCGAGTCTGGTCCGTAAAATAGATCATCGCAACGGCTCTTATGAA
TTTCGATTCGTTCCTGTAGTATCCGGTACATATCAAGCGCTCATATGGTT
GGAATATACACTATGTGCAGGGCTGAAGGAACCACCACCTGATTGGTTCA
TAAAGGGAACAGTACAAGGGAAAGAACAAAAGCAAGGTTCATTGCATAGA
GATTCTCCTTTCATCAACAAACCATTATGGTCTGGTGCCAAGTTTCAGTT
CTATGTTCCACCACCAGCAAAAAAGCAAGCACTTCAAGAACATTCAACAT
CTAACTGCAAATCTCAAGGGTGTCAATTTCTTTGGAATGGTTTTGGAAAC
TGGTTGAACAAGACACATTGGGTGCCTCGATGTCCCCATTCCACGGAATT
GCGCTATCCCAAGGAACATCCGCGTAGAGGTCTTTTATGGATTTTTGGTG
ATTCTGTATCATCACAGTTTTACCACCAAATCAAGTTTCATCCTTTATGT
CAACATCATTTCGCACGATGCATGTATTCATACAACTGGCTCTACAGCTT
GGAGAACTATAACGCGTCCTTGGGAAGgtaCACGCGTAGAAACACTACCA
TCGAAAAGACAACTTGGGACGACCTTGATTACAGTGTGAATCGTACGGTT
GCCGAACTCAGACAAGTTCTCCTTCACCCTGGAATGCAATCTAGAGAAAG
CGTACTTTTGCTAAATTACGGTCTGCATTTTACCGAGTCATTAAATTACA
CGAACTACAAAACAGCTATCGAATCGGTGATTGACGTATTAAAACGTGAA
GCATATTGTCATGTTGTATGGCGCACAACGACCTCTTTGAACCGTCACAA
ATATTCACAACCGAACTTACATTCTAGGAGATTCATGACATCGCCGagaG
TCGAATTATACAATGCATATGCAGCGAGCAGATTTTGTGAAGAGAACTTC
GACGTTCTAGATGTTTACCCGCTGACTGATTCGTACCCTGAGGGGACTGG
ATCGAGTAAAACTCCTCACGACCCAGTCCACTATGAGTATCACGTGATGC
ACCCGATGGAAAAACTATTGGAACGCGTTTTTAAGATCAAATGACGTGTT
TCAAGAGTGGTTAACATATTCACATCTCATGTACCAACATCGAGTCAAGC
TTCAGCAAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATTTTCACC
GATATGAAGAGATTTGTCCTGATTTCAACTGGTTATCTAAAGAGGCGTTA
CCATGGTTTCAACTTGCCAATCACACTGATCCAACTCGTGGGATCGTTCA
CAATCTAGTCATCAAGCCTGTGTACCAATTCAGTATTATAACACTTCAGa
cacaaaacaaaaaagctGATTTGAAGCAATCTGGAGGTGACCATTGGCGT
GTCCAAATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAAAATAGA
TCATCGCAACGGCTCTTATGAATTTCGATTCGTTCCTGTAGTATCCGGTA
CATATCAAGCGCTCATATGGTTGGAATATACACTATGTGCAGGGCTGAAG
GAACCACCACCTGATTGGTTCATAAAGGGAACAGTACAAGGGAAAGAACA
AAAGCAAGGTTCATTGCATAGAGATTCTCCTTTCATCAACAAACCATTAT
GGTCTGGTGCCAAGTTTCAGTTCTATGTTCCACCACCAGCAAAAAAGCAA
GCACTTCAAGAACATTCAACATCTAACTGCAAATCTCAAGGGTGTCAATT
TCTTTGGAATGGTTTTGGAAACTGGTTGAACAAGACACATTGGGTGCCTC
GATGTCCCCATTCCACGGAATTGCGCTATCCCAAGGAACATCCGCGTAGA
GGTCTTTTATGGATTTTTGGTGATTCTGTATCATCACAGTTTTACCACCA
AATCAAGTTTCATCCTTTATGTCAACATCATTTCGCACGATGCATGTATT
CATACAACTGGCTCTACAGCTTGGAGAACTATAACGCGTCCTTGGGAAGg
taCACGCGTAGAAACACTACCATCGAAAAGACAACTTGGGACGACCTTGA
TTACAGTGTGAATCGTACGGTTGCCGAACTCAGACAAGTTCTCCTTCACC
CTGGAATGCAATCTAGAGAAAGCGTACTTTTGCTAAATTACGGTCTGCAT
TTTACCGAGTCATTAAATTACACGAACTACAAAACAGCTATCGAATCGGT
GATTGACGTATTAAAACGTGAAGCATATTGTCATGTTGTATGGCGCACAA
CGACCTCTTTGAACCGTCACAAATATTCACAACCGAACTTACATTCTAGG
AGATTCATGACATCGCCGagaGTCGAATTATACAATGCATATGCAGCGAG
CAGATTTTGTGAAGAGAACTTCGACGTTCTAGATGTTTACCCGCTGACTG
ATTCGTACCCTGAGGGGACTGGATCGAGTAAAACTCCTCACGACCCAGTC
CACTATGAGTATCACGTGATGCACCCGATGGAAAAACTATTGGAACGCGT
TTTTAAGATCAAATGACGTGTTTCAAGAGTGGTTAACATATTCACATCTC
ATGTACCAACATCGAGTCAAGCTTCAGCAAGATATTGGGAAGAGTGGAAC
CAATGGCGTGTCGATTTTCACCGATATGAAGAGATTTGTCCTGATTTCAA
CTGGTTATCTAAAGAGGCGTTACCATGGTTTCAACTTGCCAATCACACTG
ATCCAACTCGTGGGATCGTTCACAATCTAGTCATCAAGCCTGTGTACCAA
TTCAGTATTATAACACTTCAGacacaaaacaaaaaagctGATTTGAAGCA
ATCTGGAGGTGACCATTGGCGTGTCCAAATCAAAGGACCCTACTCCGCAT
CGAGTCTGGTCCGTAAAATAGATCATCGCAACGGCTCTTATGAATTTCGA
TTCGTTCCTGTAGTATCCGGTACATATCAAGCGCTCATATGGTTGGAATA
TACACTATGTGCAGGGCTGAAGGAACCACCACCTGATTGGTTCATAAAGG
GAACAGTACAAGGGAAAGAACAAAAGCAAGGTTCATTGCATAGAGATTCT
CCTTTCATCAACAAACCATTATGGTCTGGTGCCAAGTTTCAGTTCTATGT
TCCACCACCAGCAAAAAAGCAAGCACTTCAAGAACATTCAACATCTAACT
GCAAATCTCAAGGGTGTCAATTTCTTTGGAATGGTTTTGGAAACTGGTTG
AACAAGACACATTGGGTGCCTCGATGTCCCCATTCCACGGAATTGCGCTA
TCCCAAGGAACATCCGCGTAGAGGTCTTTTATGGATTTTTGGTGATTCTG
TATCATCACAGTTTTACCACCAAATCAAGTTTCATCCTTTATGTCAACAT
CATTTCGCACGATGCATGTATTCATACAACTGGCTCTACAGCTTGGAGAA
CTATAACGCGTCCTTGGGAAGgtaCACGCGTAGAAACACTACCATCGAAA
AGACAACTTGGGACGACCTTGATTACAGTGTGAATCGTACGGTTGCCGAA
CTCAGACAAGTTCTCCTTCACCCTGGAATGCAATCTAGAGAAAGCGTACT
TTTGCTAAATTACGGTCTGCATTTTACCGAGTCATTAAATTACACGAACT
ACAAAACAGCTATCGAATCGGTGATTGACGTATTAAAACGTGAAGCATAT
TGTCATGTTGTATGGCGCACAACGACCTCTTTGAACCGTCACAAATATTC
ACAACCGAACTTACATTCTAGGAGATTCATGACATCGCCGagaGTCGAAT
TATACAATGCATATGCAGCGAGCAGATTTTGTGAAGAGAACTTCGACGTT
CTAGATGTTTACCCGCTGACTGATTCGTACCCTGAGGGGACTGGATCGAG
TAAAACTCCTCACGACCCAGTCCACTATGAGTATCACGTGATGCACCCGA
TGGAAAAACTATTGGAACGCGTTTTTAAGATCAAATGACGTGTTTCAAGA
GTGGTTAACATATTCACATCTCATGTACCAACATCGAGTCAAGCTTCAGC
AAGATATTGGGAAGAGTGGAACCAATGGCGTGTCGATTTTCACCGATATG
AAGAGATTTGTCCTGATTTCAACTGGTTATCTAAAGAGGCGTTACCATGG
TTTCAACTTGCCAATCACACTGATCCAACTCGTGGGATCGTTCACAATCT
AGTCATCAAGCCTGTGTACCAATTCAGTATTATAACACTTCAGacacaaa
acaaaaaagctGATTTGAAGCAATCTGGAGGTGACCATTGGCGTGTCCAA
ATCAAAGGACCCTACTCCGCATCGAGTCTGGTCCGTAAAATAGATCATCG
CAACGGCTCTTATGAATTTCGATTCGTTCCTGTAGTATCCGGTACATATC
AAGCGCTCATATGGTTGGAATATACACTATGTGCAGGGCTGAAGGAACCA
CCACCTGATTGGTTCATAAAGGGAACAGTACAAGGGAAAGAACAAAAGCA
AGGTTCATTGCATAGAGATTCTCCTTTCATCAACAAACCATTATGGTCTG
GTGCCAAGTTTCAGTTCTATGTTCCACCACCAGCAAAAAAGCAAGCACTT
CAAGAACATTCAACATCTAACTGCAAATCTCAAGGGTGTCAATTTCTTTG
GAATGGTTTTGGAAACTGGTTGAACAAGACACATTGGGTGCCTCGATGTC
CCCATTCCACGGAATTGCGCTATCCCAAGGAACATCCGCGTAGAGGTCTT
TTATGGATTTTTGGTGATTCTGTATCATCACAGTTTTACCACCAAATCAA
GTTTCATCCTTTATGTCAACATCATTTCGCACGATGCATGTATTCATACA
ACTGGCTCTACAGCTTGGAGAACTATAACGCGTCCTTGGGAAGgtaCACG
CGTAGAAACACTACCATCGAAAAGACAACTTGGGACGACCTTGATTACAG
TGTGAATCGTACGGTTGCCGAACTCAGACAAGTTCTCCTTCACCCTGGAA
TGCAATCTAGAGAAAGCGTACTTTTGCTAAATTACGGTCTGCATTTTACC
GAGTCATTAAATTACACGAACTACAAAACAGCTATCGAATCGGTGATTGA
CGTATTAAAACGTGAAGCATATTGTCATGTTGTATGGCGCACAACGACCT
CTTTGAACCGTCACAAATATTCACAACCGAACTTACATTCTAGGAGATTC
ATGACATCGCCGagaGTCGAATTATACAATGCATATGCAGCGAGCAGATT
TTGTGAAGAGAACTTCGACGTTCTAGATGTTTACCCGCTGACTGATTCGT
ACCCTGAGGGGACTGGATCGAGTAAAACTCCTCACGACCCAGTCCACTAT
GAGTATCACGTGATGCACCCGATGGAAAAACTATTGGAACGCGTTTTTAA
GATCAAATGACGTGTTTCAAGAGTGGTTAACATATTCACATCTCATGTAC
CAACATCGAGTCAAGCTTCAGCAAGATATTGGGAAGAGTGGAACCAATGG
CGTGTCGATTTTCACCGATATGAAGAGATTTGTCCTGATTTCAACTGGTT
ATCTAAAGAGGCGTTACCATGGTTTCAACTTGCCAATCACACTGATCCAA
CTCGTGGGATCGTTCACAATCTAGTCATCAAGCCTGTGTACCAATTCAGT
ATTATAACACTTCAGacacaaaacaaaaaagctGATTTGAAGCAATCTGG
AGGTGACCATTGGCGTGTCCAAATCAAAGGACCCTACTCCGCATCGAGTC
TGGTCCGTAAAATAGATCATCGCAACGGCTCTTATGAATTTCGATTCGTT
CCTGTAGTATCCGGTACATATCAAGCGCTCATATGGTTGGAATATACACT
ATGTGCAGGGCTGAAGGAACCACCACCTGATTGGTTCATAAAGGGAACAG
TACAAGGGAAAGAACAAAAGCAAGGTTCATTGCATAGAGATTCTCCTTTC
ATCAACAAACCATTATGGTCTGGTGCCAAGTTTCAGTTCTATGTTCCACC
ACCAGCAAAAAAGCAAGCACTTCAAGAACATTCAACATCTAACTGCAAAT
CTCAAGGGTGTCAATTTCTTTGGAATGGTTTTGGAAACTGGTTGAACAAG
ACACATTGGGTGCCTCGATGTCCCCATTCCACGGAATTGCGCTATCCCAA
GGAACATCCGCGTAGAGGTCTTTTATGGATTTTTGGTGATTCTGTATCAT
CACAGTTTTACCACCAAATCAAGTTTCATCCTTTATGTCAACATCATTTC
GCACGATGCATGTATTCATACAACTGGCTCTACAGCTTGGAGAACTATAA
CGCGTCCTTGGGAAGgtaCACGCGTAGAAACACTACCATCGAAAAGACAA
CTTGGGACGACCTTGATTACAGTGTGAATCGTACGGTTGCCGAACTCAGA
CAAGTTCTCCTTCACCCTGGAATGCAATCTAGAGAAAGCGTACTTTTGCT
AAATTACGGTCTGCATTTTACCGAGTCATTAAATTACACGAACTACAAAA
CAGCTATCGAATCGGTGATTGACGTATTAAAACGTGAAGCATATTGTCAT
GTTGTATGGCGCACAACGACCTCTTTGAACCGTCACAAATATTCACAACC
GAACTTACATTCTAGGAGATTCATGACATCGCCGagaGTCGAATTATACA
ATGCATATGCAGCGAGCAGATTTTGTGAAGAGAACTTCGACGTTCTAGAT
GTTTACCCGCTGACTGATTCGTACCCTGAGGGGACTGGATCGAGTAAAAC
TCCTCACGACCCAGTCCACTATGAGTATCACGTGATGCACCCGATGGAAA
AACTATTGGAACGCGTTTTTAAGATCAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014583XLOC_014583Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025932-proteinTCONS_00025932-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025932-exon-sc0000555-1491911889:187565..188048TCONS_00025932-exon-sc0000555-1491911889:187565..188048Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:187565..188048TCONS_00025932-exon-sc0000555-1510915933:187565..188048Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:187565..188048TCONS_00025932-exon-sc0000555-1575043694:187565..188048Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1491911889:188605..188727TCONS_00025932-exon-sc0000555-1491911889:188605..188727Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:188605..188727TCONS_00025932-exon-sc0000555-1510915933:188605..188727Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:188605..188727TCONS_00025932-exon-sc0000555-1575043694:188605..188727Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1491911889:190104..190253TCONS_00025932-exon-sc0000555-1491911889:190104..190253Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:190104..190253TCONS_00025932-exon-sc0000555-1510915933:190104..190253Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:190104..190253TCONS_00025932-exon-sc0000555-1575043694:190104..190253Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1491911889:190748..190895TCONS_00025932-exon-sc0000555-1491911889:190748..190895Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:190748..190895TCONS_00025932-exon-sc0000555-1510915933:190748..190895Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:190748..190895TCONS_00025932-exon-sc0000555-1575043694:190748..190895Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1491911889:191633..191951TCONS_00025932-exon-sc0000555-1491911889:191633..191951Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:191633..191951TCONS_00025932-exon-sc0000555-1510915933:191633..191951Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:191633..191951TCONS_00025932-exon-sc0000555-1575043694:191633..191951Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1491911889:192354..192587TCONS_00025932-exon-sc0000555-1491911889:192354..192587Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:192354..192587TCONS_00025932-exon-sc0000555-1510915933:192354..192587Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:192354..192587TCONS_00025932-exon-sc0000555-1575043694:192354..192587Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1491911889:196350..196679TCONS_00025932-exon-sc0000555-1491911889:196350..196679Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1510915933:196350..196679TCONS_00025932-exon-sc0000555-1510915933:196350..196679Clytia hemisphaericaexon
TCONS_00025932-exon-sc0000555-1575043694:196350..196679TCONS_00025932-exon-sc0000555-1575043694:196350..196679Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000555supercontigsc0000555:187565..196679 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.247153 0.219103 0.0763199 0.124445 1.3938 1.58027 3.63974 3.08295 0.492278 0.609766 1.86661 0.957689 1.38971 0.869038 0.803776 2.05375 1.46743 1.48678 0.47769 0.174954 0.73861 1.14438 1.33962 1.17107 1.49565 1.76543 0.431323 0.263039 0.922716 1.16877
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR017868Filamin/ABP280_repeat-like
IPR014756Ig_E-set
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025932 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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