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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025903 ID=TCONS_00025903|Name=TCONS_00025903|organism=Clytia hemisphaerica|type=transcript|length=1129bp
TTTTGTTTTTAAGATAGCGGCAACGAAGTCGGATTTTCTTTCTGGTAGCT
TTTATCGTTTTTTGATCGGAATTTCGTAGCATAAGATCATTTTTCAGTTT
ATACAGTTCCTGAAGCTTTTCATCATTATGCAACGGTTGGTAGATTTTTG
GATTTCTGATTACTGGTATGTTGTTTGATGCAGCCTCATTAATAGATTTA
AAGAGTTTATCATTTAATGATGTGTTATCGTTTTCCAGTTCAATCGCATT
AAGGTTTTCGGTAGTTGTATTTTTGAATCTTGTAAGTGTTTCGGCATTAG
TCAGAGATGAGTAGTCGAGGCGTTTTGGTTGTACTGTCTTGTTTCTTTTG
ATGTACCGTGCTAGTTTTGTACAAGGTGTTTTAAACGTTGCAATAACCAG
TCGATGGTCACTGTCAAAGTCATAGCTATTGTATACTCTACAGCTCGTTA
TGTATTGTCTAATCCAGTTACAAGATAGGACGAAATCGTAAATCTTTTTG
GTGGTGCCGTCTGGTGAGTGCCAGGTTACCCTTCGACACGTTTTGTGGGT
AAACCAGGTATTGATGACGGAAAGTTTTTGAGTATTGAACAGTTCATGAA
ACCTTTCGCCATTATTATTAACGACAAGGTCATTGATAATTACATGTTCT
CGGAGTGATGAATTGTGCCATGCGGCCGACGACGTAGCATTGAAATCTCC
GATACAAATTATCTTTCGATTATTGTCTGTAATAAGTTGTTTTCTCAAAG
TAGTGTAAAAGATCTCCTTACTTGACGTTGGGCTGTCTTCCGTTGGTGCG
TAGCAATTCACTATTCTAATTNTATacaaatagacgatatcggcttaacg
tgaaaactcagatttgatccccgaatattgcccacaatgctatgtgcgga
aaaaatttcaccgtgaacttttttccgcgcaaagcattgtgggcaatatt
cggggatcaaatctgagttttcacgttaagctgatatcgtctattatcTT
TCGATTATTGTCTGTAATAAGTTGTTTTCTCAAAGTAGTGTAAAAGATGT
CCTTACTTGACGTTGTGCTGTCTTCCGTTGGTGCGTAGCAATTCACTATT
CTAATTGAGCAACCGTACAAATTAATGTC Run BLAST on NCBI transcript from alignment at sc0000550:33741..34869 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025903 ID=TCONS_00025903|Name=TCONS_00025903|organism=Clytia hemisphaerica|type=transcript|length=1129bp|location=Sequence derived from alignment at sc0000550:33741..34869 (Clytia hemisphaerica)
GACATTAATTTGTACGGTTGCTCAATTAGAATAGTGAATTGCTACGCACC
AACGGAAGACAGCACAACGTCAAGTAAGGACATCTTTTACACTACTTTGA
GAAAACAACTTATTACAGACAATAATCGAAAgataatagacgatatcagc
ttaacgtgaaaactcagatttgatccccgaatattgcccacaatgctttg
cgcggaaaaaagttcacggtgaaattttttccgcacatagcattgtgggc
aatattcggggatcaaatctgagttttcacgttaagccgatatcgtctat
ttgtATANAATTAGAATAGTGAATTGCTACGCACCAACGGAAGACAGCCC
AACGTCAAGTAAGGAGATCTTTTACACTACTTTGAGAAAACAACTTATTA
CAGACAATAATCGAAAGATAATTTGTATCGGAGATTTCAATGCTACGTCG
TCGGCCGCATGGCACAATTCATCACTCCGAGAACATGTAATTATCAATGA
CCTTGTCGTTAATAATAATGGCGAAAGGTTTCATGAACTGTTCAATACTC
AAAAACTTTCCGTCATCAATACCTGGTTTACCCACAAAACGTGTCGAAGG
GTAACCTGGCACTCACCAGACGGCACCACCAAAAAGATTTACGATTTCGT
CCTATCTTGTAACTGGATTAGACAATACATAACGAGCTGTAGAGTATACA
ATAGCTATGACTTTGACAGTGACCATCGACTGGTTATTGCAACGTTTAAA
ACACCTTGTACAAAACTAGCACGGTACATCAAAAGAAACAAGACAGTACA
ACCAAAACGCCTCGACTACTCATCTCTGACTAATGCCGAAACACTTACAA
GATTCAAAAATACAACTACCGAAAACCTTAATGCGATTGAACTGGAAAAC
GATAACACATCATTAAATGATAAACTCTTTAAATCTATTAATGAGGCTGC
ATCAAACAACATACCAGTAATCAGAAATCCAAAAATCTACCAACCGTTGC
ATAATGATGAAAAGCTTCAGGAACTGTATAAACTGAAAAATGATCTTATG
CTACGAAATTCCGATCAAAAAACGATAAAAGCTACCAGAAAGAAAATCCG
ACTTCGTTGCCGCTATCTTAAAAACAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025903-exon-sc0000550-1491911889:33741..34869 | TCONS_00025903-exon-sc0000550-1491911889:33741..34869 | Clytia hemisphaerica | exon |
| TCONS_00025903-exon-sc0000550-1510915933:33741..34869 | TCONS_00025903-exon-sc0000550-1510915933:33741..34869 | Clytia hemisphaerica | exon |
| TCONS_00025903-exon-sc0000550-1575043694:33741..34869 | TCONS_00025903-exon-sc0000550-1575043694:33741..34869 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000550 | supercontig | sc0000550:33741..34869 . |
Blast
The following BLAST results are available for this feature:
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