TCONS_00025886 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025886
Unique NameTCONS_00025886
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1388

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025886 ID=TCONS_00025886|Name=TCONS_00025886|organism=Clytia hemisphaerica|type=transcript|length=1388bp
TTCATGCTTTTTATGCTTTTTTAGGTATATCAAGAAACCTTTGCTTATCA
ACGGTTTCAAATTTGACATTCGAGTCTACATGTTAATTGCTTCGACTTGT
CCGTATATTGCATTCTATCATAAAGGTTACGTCCGCTTATCTTGTGTACC
GTATACTGTTGATGATTTAGATATACACGCACATCTTACAAATCAGtttg
taCAGAGAAAGCATCCTTCATATAAAGAGAAGCAAGAAGAATCTGTCATG
GATTTCAACCAATTTAATGAGTATATCAATCATCATGTTGGCGAAGACAA
ATCCATTTCACAGGATTGGGTCTTTAATGAATTTACTgACAAAATGAAAT
CCATCATGTTGACATGTTTGAAAGGTTGTATGGGGAAGTTAGATGAAAAA
CCTTCAACTTTTGAATTACTTGGATTTGATTTCATGATTGATGAAAATAT
GAAGGTGTGGTTGATTGAAGTAAACATCAATCCAGCGCTACATACAAATT
GTCACGTATTAAAAGAAACTATTCCACCAGTTGTTCATCAGACTCTCGAT
ATCGCATTGGAGATATTCAACAAACGTAAGAAACGAACGAAACTTGGTCA
ACTAGACTGTGTTACTTCAATGGAACCTCTTTACAACGGTGTCACTGGGG
CCACCTGTTAGCACGTAAAAAATGTCTCCCGATCTCCTCTCATGTAATGA
CTTGAAATACCCAGgtacatccctgtgtcacagacctcggccccactgga
aaatttgacaaaaattcgtCCCCGGTAGGAAAAGACCCATCCGaaaatca
atgtttaaaaactgcACTCCAGAGCCATCCtcactgggttttttaacctt
ggaacaatagaatttatgTCCCTACTTGAATTTCGATAggaaattttatc
cccactgaggaaaaaagttccacaaGGGCTGTCAGACAGGGGTGTCCAGG
TATACCTTTCTAACAGTACCATGGACATGATGTATCCCTGGTTTCATCAT
ACCACAAATGGATTTTTGATTGGAATTTTAACGTTAGATTTGAAATAACG
AACTTCTGCGTTAAAGGAACTTGTTTTGTGAGGAGAAATAAATTTGGTGA
CATAAATTTACTTTATAATTTTAGTAGCATAAATTTATCATAAATTAGAA
AGCTTTTGATTATGGTGTGAAACTTACTTCAGCAACTGATAAGCTAAATC
TTTCCAATTTTGCATTAATAGACATTTTCTTAAAttaacatcacttgcct
cgttttgaaattattgccatggtgattaactcccagcagattttatttAA
ACTACTTTCTTTTCATATAGAAATCATGTCTCAAGAAACATAATCACCAT
ATcaattgtttgaaaacgaggcaaaggatattcgtgac
Run BLAST on NCBI

protein sequence of TCONS_00025886-protein

>TCONS_00025886-protein ID=TCONS_00025886-protein|Name=TCONS_00025886-protein|organism=Clytia hemisphaerica|type=polypeptide|length=219bp
SCFLCFFRYIKKPLLINGFKFDIRVYMLIASTCPYIAFYHKGYVRLSCVP
YTVDDLDIHAHLTNQFVQRKHPSYKEKQEESVMDFNQFNEYINHHVGEDK
SISQDWVFNEFTDKMKSIMLTCLKGCMGKLDEKPSTFELLGFDFMIDENM
KVWLIEVNINPALHTNCHVLKETIPPVVHQTLDIALEIFNKRKKRTKLGQ
LDCVTSMEPLYNGVTGATC
Run BLAST on NCBI

transcript from alignment at sc0000550:136428..150140-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025886 ID=TCONS_00025886|Name=TCONS_00025886|organism=Clytia hemisphaerica|type=transcript|length=13713bp|location=Sequence derived from alignment at sc0000550:136428..150140- (Clytia hemisphaerica)
TTCATGCTTTTTATGCTTTTTTAGGTATATCAAGAAACCTTTGCTTATCA
ACGGTTTCAAATTTGACATTCGAGTCTACATGTTAATTGCTTCGACTTGT
CCGTATATTGCATTCTATCATAAAGGTTACGTCCGCTTATCTTGTGTACC
GTATACTGTTGATGATTTAGATATACACGCACATCTTACAAATCAGGTAA
ATTAATTTTAATCTCTCTTCTTTGTCATAAAGAAACCTCAATACGCCTTT
TCGACCGTAGCCGCCAATTGCCGCGCGGGCATTTTTTTGTCCGTTTTACC
ACCCTAAATCGATCCAATTCTTTTTTAACATTTTTTCTATTGTATTTAGG
TGTGAAAAAAAGACTGGGTCGGTTTTAGGTTGGTAAAACGGACAGAAAAA
TGCCCGCAAGGCAATAGACGATATCGGCTTAACGTGAAAACTCATACTTG
ACCCCCGAGAATTGCCCACAGTTCTTTGTGCGGAAAAAAGTTCACGGTGA
AATTCTTTTCGCACAAAGCATTGTGGGCAATTCTCGTGGGTTAAATCTGA
GTTTTCATGTGAAGCCGATAGCGGCTACGGTCGAAAAGGTGTATACACAG
GTTGAAAAATTAAAGTCTGTAGACAAATCACGTTTTTACTCAAAATTTTT
ATGTGCTTGTTACATGATATTTAATTCTGATTGGTTCGAATTTATTGACA
CTAATATAAGTTATCAACTGTATATTGTAAAGCAAGTAACATGGGAATAA
AAACACGTTAACTTTTTCGAGTAATCACATTTTTTGACTGGATTGATGTA
ATTTTGCAATCCGTGTATTCTGTTTGTTTAATAATTCTTAATACATTTTT
GTCTCGTTATCATAATTTTTGGGGAATGTGATATACTTTAAGGGCAGAAA
CTTTCGCGAGACCGAAAAGTCGCGAAATTGAAGAAAATTTACGGAAGAAA
CTTTCGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TTTCTTCAATCAAAAGAGTGATATGCTAATAAATGAAAAATAAACTATTT
GCACTTCTTCCTCTCATTCCGAATCCTAGTCACTGCGATAATATCGATAA
TAACGACTCTCCTCGGCTTTTAAAACTTTCGCGAATTTAGGAAAATTTCA
TTTTTCGCGAAATTAACTTTCGCGAATTTTTTGTTTAATTTCTTACATTC
GCGAAAAAATGCCAAAAACGCGAAAAACGCGAAAGTTTCTGCCCGCGAAA
GTTTCTGCCCTTAAAGTATCTCCTATCTACTTATATTTCCCTAGAATTAC
CGTTCTAACCCTTAATGTATCCTTATAAATCAGCCATTGGAGACTAAGAT
CTGATTCTATAAATAACTTGTAGTTTTTTAAGTATTGATGCTCATCTTAA
AGGGACATAAAGTAGTAAAATGTAAACATTGTGCGAACCACGTTTCATTA
AAGAGAACAATTAAACTCACGTGTCCAAAACAAACTTGTCAAACAATTGA
AACAATTATTTTTTTTATTTTGACATGTGACATTTGTTTTGATTTTGTTT
CCCGCTGCATACGGTTTGTTTACAAATTTCGTGACTACTTTTATGTCCCT
TTAACTGGTGTTAAAAAAGTCCAATAAAACGTCCCAATTTCTCATAATCT
CATACCAGATAACGGTTTTTGCGCATTAACCCTTTAAGTGCCATGAAAAT
CGCTAGTTCAAACTTCAAAGGTTTACCGGGTGGTCCAAAAAAAACTTCCA
TAAGTTTCAAATTTTGACGTAGAGCGCTCTTATTGTGTATTTCTCCGGAT
CTAGAAGGACCTGCCTGAACGACGGAAAGATGCCCAATAGTAAAACTTCA
AATTAATTCACTACAAGACAGAATCAAGTAAGGCAGGGCCAAATTTGGAG
GTTCTTGGATCACTCGGTCAAAATCTCAAAAAAGTGGATTTTTGTCAAAT
ATTTGCATTTTTTTGACTTTTTAGCATAAAATCTTTCGACACAAATAATT
GGACACAAATTCAATTTTTAAGGTTTTTGACTTTTAAAGAAATATAGTCT
GCAAAAAAGTGGGGCCAATGGTCACGGGCTAATATCCATGAATCGGTATT
TTAAAGGTTTTTTTTTTTCTAAACAAGAGTGAAATCGTTTGCTTACTCAT
CAATTTTAATTTACAGGCTTTTTCACATTGCATTGACACCGAACAAGATT
GGCCAGAAAGTATGGAGAAAAAAACATTTTTTGCTTATATCAGCACAATA
TAACAATAGGCAGACACTTTCCTGATATCAAATACGTGTCTGATATGAAA
CGGGAACACTTGTGTAAAAAAATACCTTTAAAATCAATCTTCACATTTTA
TTTTTAGTTTGTACAGAGAAAGCATCCTTCATATAAAGAGAAGCAAGAAG
AATCTGTCATGGATTTCAACCAATTTAATGAGTATATCAATCATCATGTT
GGCGAAGACAAATCCATTTCACAGNAACAAACTTGTCAAACAATTGAAAC
AAGCATTTTTTTTATTTTGACATGTGACATTTGTTTTGATTTTGTTTCCC
GCTGCATACGGTTTGTTTACAAATTTCGTGACTACTTTTATGTCCCTTTA
ACTGGTGTTAAAAAAGTCCAAGAAAACGTCCCAATTTCTCATAATCTCAT
ACCAGATAACGGTTTTTGCGCATTAACCCTTTAAGTGCCACGGTCCTTTT
TTAAGAAAATCGCTAGTTCAAACTTCAAAGGTTTATTTCTCCGGATCTAG
AAGGACCTGCCTGAATGACGGAAAGATGCCCAGTAGTAAAACTTCAAATT
AATTCACTACAAGACAGAATCAAGTAAGGCAGGGCCAAATTTGGAGGTTC
TTGGATCACTCGGTCAAAATCTCAAAAAAGTGGATTTTTGTCAAATATTT
GCATTTTTTTGACTTTTTAGCATAAAATCTTTCGACACAAATAATTGGAC
ACAAATTCAATTTTTAAGGTTTTTGACTTTTAAAGAAATATAGTCTGCAA
AAAAGTGGGGCCAATGGTCACGGGCTAATATCCATGAATCGGTATTTTAA
AGGTTTTTTTTTTTCTAAACAAGAGTGAAATCGTTTGCTTACTCATCAAT
TTTAATTTACAGGCTTTTTCACATTGCATTGACACCGAACAAGATTGGCC
AGAAAGTATGGAGAAAAAAACATTTTTTGCTTATATCAGCACAATATAAC
AATAGGCAGACACTTTCCTGATATCAAATACGTGTCTGATATGAAACGGG
AACACTTGTGTAAAAAAATACCTTTAAAATCAATCTTCACATTTTATTTT
TAGTTTGTACAGAGAAAGCATCCTTCATATAAAGAGAAGCAAGAAGAATC
TGTCATGGATTTCAACCAATTTAATGAGTATATCAATCATCATGTTGGCG
AAGACAAATCCATTTCACAGGATTGGGTCTTTAATGAATTTACTGTAAGT
AGCTACTTTAGGATTTAAAATGTAAGCTCCTGCTCTTTTATACTCTTTAC
CATAGTGTATCTCGTGTTTATTGCTTCGTAGTATACTCCGTGCACATTGT
CTGCTTGATATCGCAGTGGTCGGTTTGAAAAATTTCAAATAGGAAAAGAC
AATAACAACAGACCCTCTACGGCAATGAATTTTGAAATTAGCCGTAGATA
CTGGTCGCTCTTTTAGCGACCGTAGTGCAAAGGTAGCGTTCGGATATGAT
GTGCAAGCTTGTTGGTTCAATCCCCGGCTGGGTCACACCAAAGACTACGT
ACTTAGTACAAAATGGCACTTGATGCGTCTCTGCTTTGATGCTCAGCAAT
TAATGGATCAAGGAGAAGTGGAGCAATCCAGGGAGAAGGAGTGACGTCTA
CCTTTGGGTGGATAGCTATGAAAAGAGGAGACTTCGACTGCGGACTTAAT
TATGAGCTCCTTGGAGCAGGCGTTTAGACCAACCTTTAGGTTAAGCTGAG
TCTTTAACTTACAAAATTTCAAAAACACTTTTTCTGTCAAGTTTTGGTCA
GGTATAAAAAAATCGGGTAAAAGTTTTGGTCGGGTGATCTTAGTGTCCAC
CCCCCAGGGAAAATTTATTTTGGTAAAAATGCAAAAATGGGGGGGGGGTT
AAAACCTTTTTGAAAATCAAGGGGAGGACAAAAATTAAATGCAAATAATA
AAATCTCTAGGTGAGAGAAAAGATTTTTGGGCTTCAAAGCAGTAAAATAT
AGTATGTTTTATGCATTTTTTAGCAAATCAGTGTAAAAACATTTAGGCAA
AAACGCATGAAATCGGAGACATTGAGGCTTCAAAATTTTTTTTGAAAAGG
GGGGTTTTCAAAAATCTTAGGGGGGATTTAAAAGGGGCAAGAAGAATATT
TCCACTGTATGGACTTGTGAAGTAGGCTATTGGCTCTGTTTTAAATTCGA
CGCTCTGTTTGGGCGTTACCTTTCATTTTTGAAATGTTTAACTTTTCAAA
AGATGACTATCAAAGAAGTTAATGTCAAGCAAAAAAGTCAAAAATTCAAT
AATATGAATCATGTTTTCGTATTTTTTATCCTTACTCGAAACCAGTCGGA
AATCCTTGAAAAAAATGTAAACAAAGTTTAAGATTTATAAATAATTTATA
AATCTATTTGATACCTTTTGATGCTGTCAGCAAGGTAGTGTAAACAATCA
AGGAAGCTAATGGTCTCCTGGAGTCTATTATCCTTTAAGAAGTGACAGAT
CCAGTAGTGTAGACAGAAGGGGCGCAAAATTTGTGTAGGAGAGCAGACTT
TTATGACAGTAATCATCCTTTTATATGACGAGTGGATAATAATAGTGTCA
TAAAAATCTGCTCTCCTACACAAATTTTGCTCTCCTCCTGTCTACGGCAC
TGGATACTGCTTTACTTTGATTGGTTTAAATTCGAACTTCTAAAAATAAA
TTTTCTTTTGAAACAAATATGATTTAACAAAATATATAACTTTGTCAAGA
TCAAAAAATTTTTCGTTGGATTTGGACATATAAAACTAAAGGCTATATTG
CCATCTAGTTTTATAAGTAGTGATTCCTCTAGGATGGAGAATATCAAAAT
CATAATCTACGTAATATTGAAACTTCAAACATTTGTTTCTGGGCAAAGAG
TTTTTGAATTAGTTTCCACTGGCAAAACAATAGATGCTACGCCTTGCAAT
ACAATTCAAGAAACACCCTACCCAAGATGCATCAGTATTTGTTCTTTAAC
CCCAGAATGCCGTTCGTTTGATTATACTCCCTCGCTGCAAAGAAGTGGAA
TTTATGGAGAATTTCATTTTTATGATATTGATTTCGAATTCTATCAAGAT
CAACAAGTTGGAGGATTGAAAGCAAGCAGCACAACAAAATATTATTCGAT
TTTGATGCTCAAAGATTGCGCCGCTTGGTTCAATTATGGTGCACGGGAAG
ACGGCATTTACGATGTTTTTCTATTGGGGAAATACCGACGCCGTGTTTTT
TGTTTGATGCAACACGCTGGTGGCGGATGGATGGCCTTTCAGCGCCGTTT
TGATGGATCTGTCAGATTCATGAATCGTAACTGGAGAGAATTCAAAGAGG
GGTTTGGGAACGAGGAAGGAGAATATTACCTTGGAAACGAGCTTCTCAAT
TTGTTGACAACGGATGAAGGACATGATTGGTTGGTGAGAGGAACCAATTG
GGATGGAATTACTCAAATGAAAATGATTCATAATGTCATAATCGAAAGTG
AAACTGATTGGTATCAACTAAACTACGATGCATCTGATATTGACTCGACC
TTTTCTACCGTGTGGTATGGTGAAGTCATGAGAGGGATGAAATTTTCTAC
ATTTGACGAGGATCACGATATAGCATCTACAAATAATTGTGCCGCTATAC
ATGGTGGATGGTGGCATAAGAAATGTCATGGGGTAGCAATGAACGGTCCA
TACAGGGCCAACGTTCGTGACCGTCCTTCTCACGATGCAAATGGTATTAT
ATGGTGGAATTTCGATAATAACGGAAATCCGAAATACACAAATTTACAAA
GCAGTTTGATCATGATTCGACCCTCCTCTTTCTAACCATAAAGACTTTTT
TCAGTACACTAGCAGAAGTTGTATTACCTGACGATTAGCGCTGCTACTTC
CAAAATGAACTGGAATTGACAAAGCGCGTGTATTTAAAAAAAACCGGACA
TACAGCACCATGGACAGTATTATGCTTAAAGAAAGGCTGGGCCAATGAAT
CACATTTAATTTCAAAACAAAGGCTGTCATTTAAATAACAGCCTAATCGA
AAAATTGAGAACAATTCGAAACGATCTCACTGAAAATTTTGACATTGACA
TTTTTTCTGATGTGTTTTTTATTTTGAAAGTTGGACCATTGCAAGCTCAC
TGTTAACCATTGAAATTTGGTTAAAAACTTACTCTCGGGTACCTAATAGC
CGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGAGTCTC
AAAACTTAATAAGGGGGGGGGGGGGGGGGGTTGGAATAAAAATGTCTTTG
GTGGAAAATTTCCGAAAAGGAGGCTAATACAGCAGAATTAGGGCAAAAGA
GGGGAGTTTCAAAAATGTTTTCCAAAAATCAATAAGCCGGGGGGGGGTTG
CATAAGAATGTTCTAGGTAATTAGCGGCCCCCCCTGGCTATTAGGTAACC
GAGAGTACTTTATTTAGTAGTTTAAAACTTTGTATCTCATTTTCGTAAGT
ATTGTATATATCTAATATTTATTAACTATTATATCTTATAACGACAAATT
AGAAATGGGAAAAATGTGTCATGAAATGAAACTATCCAATCACGTGTCAA
TACAAAATCTTGAAACAATGGACACAATTCAGTTAGATTTTGTAGCATGC
TGCATACAGTTTGTTTTCTAAGGGCCCGTTTACATGGATTTTCTGTACGG
GGCGTACTGAGATTTTTCGGTACGGTCTACAGTCTGAAGTCTCATATCGT
TTACATGCCAGACCGGTCTGAGATTTCAGTACGCCCTAACTTTTGGTTCA
GTCAAAACCACCGAACCGAAATTTCAGTATGGTCCAGAAAATCTATGTAA
ATGCAAAGAAATTTCAGTTCGGGGTGTTCGTAGTTCCTTTTACAGACCGA
TTATTGACAGAACTCAAAATAAATTTACTGGAACGGCATTGTTCAAATTC
AAATGTTTTTCGACCACGGCTGAGATTTTTATTTTTGAAGTCTTCCATAG
GCGGTTTTAGACCATGTCGAACTTATGAGAGGAAGAGATTTGTAATTGCA
TTTTCATTGTCTTTTAACGAGCGTTGCACTCCTTTGCATGTTTCCGACGT
ACTTGCTCTATTATCTTAAATCCGCCAGTGCACTCGGCCCGCTCAAGTAC
GACGAAACCAAAAATTCAGTCCGTACACCGAAGCATGTCATGTGAACTCA
GGTCGGTCTGGATCTCAGACCGTACCGAAAATCCATGTTAATGGATTGGC
CCTAATACCGTAACTACCTTTTCTGTCTACCTTGTTTTTTGATGGTATAC
TGAGCACACGCACAACTTATGCTGACAAGGTAGAATTACCAAAACGAATC
TACCGAGCTCCTTTTTAACCGGGGCTTTTATACGCGTTTTGGCTAAACCT
TACGCGAACGCTAAAAATTTGAGATTTAATTTCGACACTTTAAAACTTTA
ATCCGGAGCAACCTACCTTGCCTATTGTTGAAAATATTCATCTGAATTGT
TGTAATGTAAAAATCAGTTAAGCTTCACAAAATTTAGCTTTTTTGCGATA
GGTGAATAATATTTCCCTTATAAAGACATTATTAATTAGATTCTTAATCA
ATCGTTGTTGGGCTGTTACATCACAAATCTATACAAGGTGTGGACGAACT
TTTTCAAGTTGAAAAAAAATCCTTGAACATGTGCAAAATATAGATTTCTT
CCTGATGTAGCCAACAAAACTATGGCCTACTATACATTTTCTGTTAGACC
AACTATTTATGAATCTGAATTTGTGATAGAAAAGCAGTTACAGTATATGG
CCCCCAATATGTAGGTTGAATTTGAAAGCTCTCTCAAATCCGCAGGAAAA
GATATTTTACAAAACTTTTTCTGCTTTTAAAACTTCAGCATCTCTACTGT
TTTTCCCAAAGTTTCAACTTGAACAATATTTTTCAGTCGCTTGAAGACAG
AAAGCTTTTTTTTCATGGCCCCAAATATGTAGGTCAGGAATTTTTGCAAT
TTTTCCAGATTTGAGGTAGAAGTATAAATTTTTGACCATAGTCTGGAAGT
ATAATTTGAAAGATGATGAGTATATAATTTGCTAGATAAAATGTTCACAG
TATCCCCTGGTCGTTAAAATGTAGAATTGTGGCCCCCAAAATGTAGGTCT
ACCTAAAATCAAACTGTATCGTCCAGTGAAAGTGAAAAACCATTGGTATG
TGCTTGTTCTCCTATAAATCTTCCAACTAACTGATGTAAAATTTGGTAAT
TTTGATAAAGGATTTCAGGATTTTCGATAATGCAAAGTCCAAAGCGAAAA
TTTTGAAATTTTGAAAATGGCTGTTTAAATGAAATGTCGTTTTGATTGAA
TTTTTGAAAACCATTTTCTTTTGGAAATAATCCCTTTTGGGTATGGATTA
CGCTGTAAAAAATTCAGAATTAAAACTTGGCTCAATCCAAAGATATGAGG
CTTTACAGTTATTTTTCTCTTATATTTTCCACGAAAACGATAATTTTTTC
CCGATTTTGCTGATTAAGCAAATATTATTGTATATGAAGTTGATTTTCTG
TTGCAAACTATGAAGTTAAGTTGGTAGCAAAGGAATTCCACAGGTTTTAG
CTATTACCCATCTTTAGAATTTTCAATTCTATTTATGCTAATTCAAGGGC
CCCCAAAATGTTGGTCGACTTAAAGATGTCATATCTTTCATTCAACTACT
CAAGATATAAAAACATCTGGATTTTTGGATAGGTATTAGGTGTAGAAAGC
ATCCTATACTCCATCTTCATAACTTAATTTCAGTATCTTAAGAGCTACAA
AGAGTTCGATGCAATTTTTGGCAGATTTTGATGCAACATTTTTTCATTTA
GAAATAAATTAGCTACTTTAAATATGTTTTATATTTTATATTTTATAAAC
CTACATATATGTTTACCAAAACATGTTTTTCTTAAAGAAGAAATACTAAC
CTACCAAAATAATAAAAAATCATTTCATTTTGACTAATCTACAGATCAGA
ATCCTCATTTGAATTAAAACCTACATATTGGGGGCCATATACTGTCTACT
TTTTGATGCATCAATTTTTTCTAAGGTTTTGAGAATTTTAGGAGAATTCG
ACCTTTTCGTGGCTTTTTATTTTCTATTTCGCATTTTTGTCAAGATGTAG
TAGGTTTTGCCGCCTTTTTAGGAGATTTTATATGTGAAATTCTACTTTAA
TTTTTATTTTTTCGCCGACCGACCGACCACTCTCTTTTTTGGGTAGCTTG
GCCCGTAAAACAACAAATTAAATTGGCCTCGCCTAACTTGAGAATAAGGA
CCAGGATAAATAATCTCTTGAAATTATAAGGATTTTTCTAATAAAAACAA
ACATTGAGCTGAATGAAGACTTGTTTTGTTTTCATCGATCGTCTATTTTA
ATGGGATAATTTCAGCAGGGATTAAATTTCACGGTTGAGCCAATCTGCGA
ATACAAATCATACATGTTGGTTGTTGAATACGCATTACTAGTGCCTCTGT
GATGTCAGTAAACATTAAAAAAGCAGTTAGTTGTCATTTTTTGAGTTTTT
TTAGAAATATTTTGCTGATGAGGCCTTTCCAAATTTCCATTGGGACTCTG
ATGACACTCAAATCCGCGAAAACCGCGAAATTTAATCCCCGTGAAAATTT
ATCCCATCAAAATATCTTTTGAGGCTCCCGGTACCTAATAGTAAATTTGT
TTTCGCAAACTTCCCTTAGGTACAAAATAACCTCCCTGTCAATCAAAATA
ATTCAATCTTTTCGAAAACTCCCGGCTTGTATAGAAAGATTGAGAAATTG
AGAAATTAATTTTTGATTTTTATTCATTATTTTTAGGACAAAATGAAATC
CATCATGTTGACATGTTTGAAAGGTTGTATGGGGAAGTTAGATGAAAAAC
CTTCAACTTTTGAATTACTTGGATTTGATTTCATGATTGATGAAAATATG
AAGGTGAGAGAAATAATGGAGAAATATTTTATGTAATTTATAGACCAGAG
CAGAGCTAGAAAGATGTCTTAAGACATTTCAGACAATCGCAAATCTATGA
CATCTGTCACACCTGACACTCCTAGGTGACGAAAAAATATCATGCTTTCC
CTTCCTGCAAAGCTTATTAGGTGAGCAAATCATATTTCTAGCCTCGTCAA
ACTTTTAGTGAAATACAGTATTTGTCTCGTTTTGTTAGAAAATTTTAACT
TATGCAAGCCTTCACTTCCTCTCTCCATTTTTGGAATTGTGTTTCCATCC
TTGTGTAAATCCAGCTTTTTAGGTTTATCAGATATTACAGAATCGCGTGT
TTTAGGCATTATGGTATTTTTTTTCTGAGAATACCGGTGTGCACTAAAAC
CTTTTGGACAGGCTTGAGACTCAAAAAATAACCCGGTTTGGCTAGAATTT
TAAACAAGAATCGGGCTTTCCAAAAGCTTACTGCTACTGGAAGTTCCAAG
ATTTAAGCCTGGTATATTTTGCGTTGAAATAAAAACGTATATATATTCTA
TAAATTCACTTTAACCTTACTTTAAAGGTGTGGTTGATTGAAGTAAACAT
CAATCCAGCGCTACATACAAATTGTCACGTATTAAAAGAAACTATTCCAC
CAGTTGTTCATCAGACTCTCGGTAAGTTTCATACTCATTTTCGGGGTATT
TATAATCTCAACTGGCTTATAGCATCTTATTTAACGATATCAAAAACCAC
CCCTGATCCTTTGAAGTACATTAAAGCACGGTAGCAAATTCAAATTTTGA
TCAATCATTTTCTATATTGTTAGATATCGCATTGGAGATATTCAACAAAC
GTAAGAAACGAACGAAACTTGGTCAACTAGACTGTGTTACTTCAATGGAA
CCTCTTTACAACGGTGTCACTGGGGCCACCTGTTAGCACGTAAAAAATGT
CTCCCGATCTCCTCTCATGTAATGACTTGAAATACCCAGGTACATCCCTG
TGTCACAGACCTCGGCCCCACTGGAAAATTTGACAAAAATTCGTCCCCGG
TAGGAAAAGACCCATCCGAAAATCAATGTTTAAAAACTGCACTCCAGAGC
CATCCTCACTGGGTTTTTTAACCTTGGAACAATAGAATTTATGTCCCTAC
TTGAATTTCGATAGGAAATTTTATCCCCACTGAGGAAAAAAGTTCCACAA
GGGCTGTCAGACAGGGGTGTCCAGGTATACCTTTCTAACAGTACCATGGA
CATGATGTATCCCTGGTTTCATCATACCACAAATGGATTTTTGATTGGAA
TTTTAACGTTAGATTTGAAATAACGAACTTCTGCGTTAAAGGAACTTGTT
TTGTGAGGAGAAATAAATTTGGTGACATAAATTTACTTTATAATTTTAGT
AGCATAAATTTATCATAAATTAGAAAGCTTTTGATTATGGTGTGAAACTT
ACTTCAGCAACTGATAAGCTAAATCTTTCCAATTTTGCATTAATAGACAT
TTTCTTAAATTAACATCACTTGCCTCGTTTTGAAATTATTGCCATGGTGA
TTAACTCCCAGCAGATTTTATTTAAACTACTTTCTTTTCATATAGAAATC
ATGTCTCAAGAAACATAATCACCATATCAATTGTTTGAAAACGAGGCAAA
GGATATTCGTGAC

Coding sequence (CDS) from alignment at sc0000550:136428..150140-

>TCONS_00025886 ID=TCONS_00025886|Name=TCONS_00025886|organism=Clytia hemisphaerica|type=CDS|length=3300bp|location=Sequence derived from alignment at sc0000550:136428..150140- (Clytia hemisphaerica)
ATATCGCATTGGAGATATTCAACAAACGTAAGAAACGAACGAAACTTGGT
CAACTAGACTGTGTTACTTCAATGGAACCTCTTTACAACGGTGTCACTGG
GGCCACCTGTTAGGTGTGGTTGATTGAAGTAAACATCAATCCAGCGCTAC
ATACAAATTGTCACGTATTAAAAGAAACTATTCCACCAGTTGTTCATCAG
ACTCTCGGACAAAATGAAATCCATCATGTTGACATGTTTGAAAGGTTGTA
TGGGGAAGTTAGATGAAAAACCTTCAACTTTTGAATTACTTGGATTTGAT
TTCATGATTGATGAAAATATGAAGTTTGTACAGAGAAAGCATCCTTCATA
TAAAGAGAAGCAAGAAGAATCTGTCATGGATTTCAACCAATTTAATGAGT
ATATCAATCATCATGTTGGCGAAGACAAATCCATTTCACAGGATTGGGTC
TTTAATGAATTTACTTCATGCTTTTTATGCTTTTTTAGGTATATCAAGAA
ACCTTTGCTTATCAACGGTTTCAAATTTGACATTCGAGTCTACATGTTAA
TTGCTTCGACTTGTCCGTATATTGCATTCTATCATAAAGGTTACGTCCGC
TTATCTTGTGTACCGTATACTGTTGATGATTTAGATATACACGCACATCT
TACAAATCAGATATCGCATTGGAGATATTCAACAAACGTAAGAAACGAAC
GAAACTTGGTCAACTAGACTGTGTTACTTCAATGGAACCTCTTTACAACG
GTGTCACTGGGGCCACCTGTTAGGTGTGGTTGATTGAAGTAAACATCAAT
CCAGCGCTACATACAAATTGTCACGTATTAAAAGAAACTATTCCACCAGT
TGTTCATCAGACTCTCGGACAAAATGAAATCCATCATGTTGACATGTTTG
AAAGGTTGTATGGGGAAGTTAGATGAAAAACCTTCAACTTTTGAATTACT
TGGATTTGATTTCATGATTGATGAAAATATGAAGTTTGTACAGAGAAAGC
ATCCTTCATATAAAGAGAAGCAAGAAGAATCTGTCATGGATTTCAACCAA
TTTAATGAGTATATCAATCATCATGTTGGCGAAGACAAATCCATTTCACA
GGATTGGGTCTTTAATGAATTTACTTCATGCTTTTTATGCTTTTTTAGGT
ATATCAAGAAACCTTTGCTTATCAACGGTTTCAAATTTGACATTCGAGTC
TACATGTTAATTGCTTCGACTTGTCCGTATATTGCATTCTATCATAAAGG
TTACGTCCGCTTATCTTGTGTACCGTATACTGTTGATGATTTAGATATAC
ACGCACATCTTACAAATCAGATATCGCATTGGAGATATTCAACAAACGTA
AGAAACGAACGAAACTTGGTCAACTAGACTGTGTTACTTCAATGGAACCT
CTTTACAACGGTGTCACTGGGGCCACCTGTTAGGTGTGGTTGATTGAAGT
AAACATCAATCCAGCGCTACATACAAATTGTCACGTATTAAAAGAAACTA
TTCCACCAGTTGTTCATCAGACTCTCGGACAAAATGAAATCCATCATGTT
GACATGTTTGAAAGGTTGTATGGGGAAGTTAGATGAAAAACCTTCAACTT
TTGAATTACTTGGATTTGATTTCATGATTGATGAAAATATGAAGTTTGTA
CAGAGAAAGCATCCTTCATATAAAGAGAAGCAAGAAGAATCTGTCATGGA
TTTCAACCAATTTAATGAGTATATCAATCATCATGTTGGCGAAGACAAAT
CCATTTCACAGGATTGGGTCTTTAATGAATTTACTTCATGCTTTTTATGC
TTTTTTAGGTATATCAAGAAACCTTTGCTTATCAACGGTTTCAAATTTGA
CATTCGAGTCTACATGTTAATTGCTTCGACTTGTCCGTATATTGCATTCT
ATCATAAAGGTTACGTCCGCTTATCTTGTGTACCGTATACTGTTGATGAT
TTAGATATACACGCACATCTTACAAATCAGATATCGCATTGGAGATATTC
AACAAACGTAAGAAACGAACGAAACTTGGTCAACTAGACTGTGTTACTTC
AATGGAACCTCTTTACAACGGTGTCACTGGGGCCACCTGTTAGGTGTGGT
TGATTGAAGTAAACATCAATCCAGCGCTACATACAAATTGTCACGTATTA
AAAGAAACTATTCCACCAGTTGTTCATCAGACTCTCGGACAAAATGAAAT
CCATCATGTTGACATGTTTGAAAGGTTGTATGGGGAAGTTAGATGAAAAA
CCTTCAACTTTTGAATTACTTGGATTTGATTTCATGATTGATGAAAATAT
GAAGTTTGTACAGAGAAAGCATCCTTCATATAAAGAGAAGCAAGAAGAAT
CTGTCATGGATTTCAACCAATTTAATGAGTATATCAATCATCATGTTGGC
GAAGACAAATCCATTTCACAGGATTGGGTCTTTAATGAATTTACTTCATG
CTTTTTATGCTTTTTTAGGTATATCAAGAAACCTTTGCTTATCAACGGTT
TCAAATTTGACATTCGAGTCTACATGTTAATTGCTTCGACTTGTCCGTAT
ATTGCATTCTATCATAAAGGTTACGTCCGCTTATCTTGTGTACCGTATAC
TGTTGATGATTTAGATATACACGCACATCTTACAAATCAGATATCGCATT
GGAGATATTCAACAAACGTAAGAAACGAACGAAACTTGGTCAACTAGACT
GTGTTACTTCAATGGAACCTCTTTACAACGGTGTCACTGGGGCCACCTGT
TAGGTGTGGTTGATTGAAGTAAACATCAATCCAGCGCTACATACAAATTG
TCACGTATTAAAAGAAACTATTCCACCAGTTGTTCATCAGACTCTCGGAC
AAAATGAAATCCATCATGTTGACATGTTTGAAAGGTTGTATGGGGAAGTT
AGATGAAAAACCTTCAACTTTTGAATTACTTGGATTTGATTTCATGATTG
ATGAAAATATGAAGTTTGTACAGAGAAAGCATCCTTCATATAAAGAGAAG
CAAGAAGAATCTGTCATGGATTTCAACCAATTTAATGAGTATATCAATCA
TCATGTTGGCGAAGACAAATCCATTTCACAGGATTGGGTCTTTAATGAAT
TTACTTCATGCTTTTTATGCTTTTTTAGGTATATCAAGAAACCTTTGCTT
ATCAACGGTTTCAAATTTGACATTCGAGTCTACATGTTAATTGCTTCGAC
TTGTCCGTATATTGCATTCTATCATAAAGGTTACGTCCGCTTATCTTGTG
TACCGTATACTGTTGATGATTTAGATATACACGCACATCTTACAAATCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014554XLOC_014554Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025886-exon-sc0000550-1575043694:149945..150140TCONS_00025886-exon-sc0000550-1575043694:149945..150140Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1575043694:145347..145487TCONS_00025886-exon-sc0000550-1575043694:145347..145487Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1575043694:138088..138204TCONS_00025886-exon-sc0000550-1575043694:138088..138204Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1575043694:137420..137513TCONS_00025886-exon-sc0000550-1575043694:137420..137513Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1575043694:136428..137267TCONS_00025886-exon-sc0000550-1575043694:136428..137267Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1510915933:149945..150140TCONS_00025886-exon-sc0000550-1510915933:149945..150140Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1510915933:145347..145487TCONS_00025886-exon-sc0000550-1510915933:145347..145487Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1510915933:138088..138204TCONS_00025886-exon-sc0000550-1510915933:138088..138204Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1510915933:137420..137513TCONS_00025886-exon-sc0000550-1510915933:137420..137513Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1510915933:136428..137267TCONS_00025886-exon-sc0000550-1510915933:136428..137267Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1491911889:149945..150140TCONS_00025886-exon-sc0000550-1491911889:149945..150140Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1491911889:145347..145487TCONS_00025886-exon-sc0000550-1491911889:145347..145487Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1491911889:138088..138204TCONS_00025886-exon-sc0000550-1491911889:138088..138204Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1491911889:137420..137513TCONS_00025886-exon-sc0000550-1491911889:137420..137513Clytia hemisphaericaexon
TCONS_00025886-exon-sc0000550-1491911889:136428..137267TCONS_00025886-exon-sc0000550-1491911889:136428..137267Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025886-proteinTCONS_00025886-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000550supercontigsc0000550:136428..150140 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.44938	2.59665	0.959768	0.819824	11.9049	8.02976	12.1802	12.3416	6.29912	4.82536	6.48971	5.05312	4.25968	4.72413	4.74199	5.02637	3.95628	5.79742	3.6143	4.12327	6.53071	6.56195	4.89619	5.04663	14.3142	17.1223	4.33992	3.35937	3.74607	4.48791
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006464 cellular protein modification process
Blast
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BLAST of TCONS_00025886 vs. Swiss-Prot (Human)
Match: TTL10 (Inactive polyglycylase TTLL10 OS=Homo sapiens GN=TTLL10 PE=1 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 1.152e-50
Identity = 90/191 (47.12%), Postives = 121/191 (63.35%), Query Frame = 2 
Query:   23 RYIKKPLLINGFKFDIRVYMLIASTCPYIAFYHKGYVRLSCVPYTVDDLDIHAHLTNQFVQRKHPSYKEKQEESVMDFNQFNEYINHHVGEDKSISQDWVFNEFTDKMKSIMLTCLKGCMGKLDEKPSTFELLGFDFMIDENMKVWLIEVNINPALHTNCHVLKETIPPVVHQTLDIALEIFNKRKKRTKL 595
            RYI+ PLL++G KFD+R Y+LIA T PY+ F+  GY RL+   Y     D+  HLTNQF+Q+K P Y   +E +V      N YI+    + + +++DWVF     +M+ IM  C      KLD K   F+L+G DF+ID+N KVWL+E+N NPALHTNC VLKE IP VV +TLD+ LE F K  +  K+
Sbjct:  363 RYIQNPLLVDGRKFDVRSYLLIACTTPYMIFFGHGYARLTLSLYDPHSSDLGGHLTNQFMQKKSPLYMLLKEHTVWSMEHLNRYISDTFWKARGLAKDWVFTTLKKRMQQIMAHCFLAAKPKLDCKLGYFDLIGCDFLIDDNFKVWLLEMNSNPALHTNCEVLKEVIPGVVIETLDLVLETFRKSLRGQKM 553
The following BLAST results are available for this feature:
BLAST of TCONS_00025886 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTL101.152e-5047.12Inactive polyglycylase TTLL10 OS=Homo sapiens GN=T... [more]
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