TCONS_00025880 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025880
Unique NameTCONS_00025880
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length422

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025880 ID=TCONS_00025880|Name=TCONS_00025880|organism=Clytia hemisphaerica|type=transcript|length=422bp
cTTTGCTTAACATGTCTGTTGAAAAAAGGTCTTACAATGCACCTTTACAT
TTTATTGAGCAAATTGGTTTTGGTTTATTCCCAATGGTATATTGGCAAAG
AAACACAACACAATACAACAAGTGCTGACGATACTTCGAAACCTGTTGTT
GCAACCTCACCTATCGAATGTGCTCTTAAATGTCAAAGAAAATCTAAACT
TAGTTTTTttgttgaagaagaaaaacaatgtttttgtgtgaatgatgaaa
atgaagaaattaatTCGAATCATCAAACACCAGTGGATGGAGCACTTTAC
AAAGAACACGGGccTACAACAACAGTATGCGCAAGGAAAAGTCCATGTTC
CGATTATCATGTTTGCATCGATGAATGTTATGGATCCTACAAATGTGTAC
CACCTCAGCAATTACAGTCTTT
Run BLAST on NCBI

protein sequence of TCONS_00025880-protein

>TCONS_00025880-protein ID=TCONS_00025880-protein|Name=TCONS_00025880-protein|organism=Clytia hemisphaerica|type=polypeptide|length=140bp
LCLTCLLKKGLTMHLYILLSKLVLVYSQWYIGKETQHNTTSADDTSKPVV
ATSPIECALKCQRKSKLSFFVEEEKQCFCVNDENEEINSNHQTPVDGALY
KEHGPTTTVCARKSPCSDYHVCIDECYGSYKCVPPQQLQS
Run BLAST on NCBI

transcript from alignment at sc0000550:1800..16282-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025880 ID=TCONS_00025880|Name=TCONS_00025880|organism=Clytia hemisphaerica|type=transcript|length=14483bp|location=Sequence derived from alignment at sc0000550:1800..16282- (Clytia hemisphaerica)
CTTTGCTTAACATGTCTGTTGAAAAAAGGTCTTACAATGCACCTTTACAT
TTTATTGAGCAAATTGGTTTTGGTTTATTCCCAATGGTATATTGGCAAAG
AAACACAACACAATACAACAAGTGCTGACGATACTTCGAAACCTGTTGTT
GCAACCTCACCTATCGAATGTGCTCTTAAATGTCAAAGAAAATCTAAACT
TAGTTTTTTTGTTGAAGAAGAAAAACAATGTTTTTGTGTGAATGATGAAA
ATGAAGAAATTAATTCGAATCATCAAACACCAGTGGATGGAGCACTTTAC
AAAGAACACGGGGTAAATTTTTATCATTCTATTATTTTTTAGCTTTTTTT
AAGATTCCATATGATTTTAAAACTCACACTCAAAGGTTTTATTTTTACAT
AAGTGTTCCCGTTTCATATCAGAGCCCGGCTGTTCAAAGGTGGATTAGCT
TAATTTTTAATTAAATATCGATTAGCGCCGATTAGCACAGGACTGTCGGT
TATTTGAAAAAAAAAATAGACTTAAATCTAGATTAAATCCTGATTAAATT
GGCCAAATTTTAATCCTGCTCTGACCACTGATCTTTATATATCCCTGGAC
CAAGCTATATCTGCCATCTTTGATCGAAGTTTTTTGAAAGTTGGTGCCTG
CAAAGAAGCCATTGTAGTTTTTGAAACTTTTCCTACCGGCAAACGGCGCT
ACATCACCAGTGTACAAGCGACATAAGATCTAGCGCGGGTACCAATTTCA
AAAAAAACTCCAATCATAATATTTTGCTTGGCCGGCATTGAGTAGCTTGA
TCCAGGGATATATTAGGGATATATAAAGGTTATCGCCTCTGACCAATGTC
AATCCAATATTAGTGACTATGCTCTGACCCAGGATTAGCGAGGATTAAGA
AGCTTTTTCCTATAAAAAAAGTGAAGTCGCTGCATTTAAGTGAGAAATTC
GAACGAAAAATGTTTTGGAAACATTCTCAAATTCAGGTTTTTGAAAACAC
AGGCAAAATGTCCACGATTACAGTAGTTAATCTGACGTTCGAACAACGAA
AGTTAATCGCGATTAGCAGTAATCGGGATTTAATTTAGTCGATATTTGAA
CAACCGGGCCCAGGCTACGATGATAAATGTTCGAGTTAAGGAGGCATTCG
AGTTATAGAGGTACTCCACTGTATTATTCTTGCTTGAAAAAGACTACCTC
AATAGATTTCCTTCAAACCTAATCAATTTTTTTCAGCCTACAACAACAGT
ATGCGCAAGGAAAAGTCCATGTTCCGATTATCATGTTTGCATCGATGAAT
GTTATGGATCCTACAAATGTGTACCACCTCGTAAGATTCTATCTTTCTCT
AAAGCCAAACTTCTATCTTAATCGAAGAAATTTAGGCGGGAGTTTAACAG
CCTTTTAAGAAGACTCTCTGTCTATCTTGCATTTTTCTTTGCAATAGCCA
GTCTACAAAACCTTTCAATCGAACAGTTCTCATTTTTAATTACTTGATCG
AGTAAAGTCAAAGAAATTCTACCACGTTTGCAATTTTTATCATCATTAAA
TATTAACAATTTACTCAAGCGACCAGAAGGCATTCTCACAACATGAGCTG
CGTAGTTTCGTTTTTGTTGTTTGATAAAAACACTAACATCTGAGGTACCA
CATATAGTGTGAAGCTGCTTGTTGCTAATGACGTATCGAAAATATGATAG
AATCGAGATATTGGTCTTGATTGATGGTCATTGTTTCGGTTTTCGAGCCA
TTGATTGTCAAACCAAAGGCAGTGAAAGTTAAATCCAAAAGCTCTGTTGC
AGCACTGATACCCTCGAGTGAAAGTAGAAAGAGGATGATGTCATCAGCAT
ATCCACACCAAGAGAGATCACTTCTCCCCAAGTTCTTATACCACTTGCTC
TCATCTCGGATCTTTCTGCACGAGAGTGTGCTTGTGGGTTAACTCGATAT
TTGTGTTTGAAGAACTTGATTCAGTTTACATCTTTACATTTTTCGATAAA
TACTCTCATAACGAAGTCTAGTTATAAATTGGACAAAAAGGGACTTTCGG
GTCCCCTTGACGCACACCGGGAGTCGTTTTGAAGGATATCATAGCATCGT
CGTAGGTGAGGGTGGTATTTTCGTACAAAGTTTCAAGAATTTCGAAATTT
CGAGGCATGGATCTATCAGGGAAGCACAGTTTAATACTTTCAAAGAGCCA
GCTTCGTGGTATGTGGTCGAAAGCTGCACTTAGATCAACAAATAGAAGAA
ATGTAGGTTCAGACTTTTTGTTTGAAATTTGGTGAACTCGTTTGACTGTG
TAGATACCGTCTGTTGTTCCACGGTCCTTTCTAAAGCCATTTTGCTCATC
CAATAACTGATTCTCGTACCAGGGTCTGAGTCGTTCAAGAATTATATTAA
TGGCTAATTTGCAGACGGTTGATGCTATACTAATTCCGCGGTATTTTGTT
GGGTCTTTCTTGAACCTTTCCCTTTCCACAATGTCTTAAGTCTAAAGTTT
CCCCACGCACCAGGGATGTCGAGATTATTCCACAGGTTGAACATCATTCT
ATGTATCACCTGATTGGTTCGGTACATATTTTCAAGAGCTCCGGTTCAAT
GTCGTTAGATGCCTTGTTATTTTTAAGTTTTTGTAAGTGTTTCTGTATTT
CTTAAACGGTTGGGGGTGCATCATTTAATTCAGAATTCAATGAGATATTT
TGTAGAGCATTGACGAAAATTGGAAGATTCAGAAATTCCTCAGGTGTTTG
GGTTGTAGAAGGGTCTTCTGGGTTAAAATGTGTTTTAAAACGGTTCAAAA
GTTTGTCCGGAGGACATGATCCAATGACTGGTTTTTAGGTGGTTTCTTGC
TTTTTGGCACGGGCAAATAATTTATCAAGTTCTCTGTTAATGGACAATTG
GTTTATTTTCTCGGCTTCATCTCTATAAAATTGATTTCGTAATTTTCGAG
CTCTAGTTCTGATTTTCTTACGAACGGCTTTCATTTTTTTCGGACAGGCA
TTTCTCATTCCGAATCGAGTTCTTTCTGTTGATATAGTTCCTTAAGTTTT
GCATCCTCATGCCACGGCTGGTGTAGTTTTCGAGCAACTATTTTCGGAAT
CGTTTCGTTTGCAGCTTCTTAAATAGAAGTAATAAAGTGATCGTTGAATT
GAGTATTCGATTGCATTTCTGGCTGAATATACTCAAGCTTGAAGGAAAGA
TTCCTTTTAAAGTTTTGTTCCGTCTCAGCACGATTCAGGGATTTGAAATC
AAAACGTTTCTTTGGTGATTTCATTCGATGCGATCACCAAACGATGGTCA
CTATCAAAGTCATATGAGTAGTATACTCGACAATTCGTACAATACTGTCT
CAACCAGTTACAACAGAGAATAAAATGATATACCTTTCTGGTGTTCCCAT
CTTGCGAGTGCCAAGTATATCTACGACAAAGTTTATGAGTGAACCATGTA
TTCAAGACTGAAAGTTTGCACGATTGGAAGACATCATGGAAACGTTCGCC
GTTATCGTTGATGACCAAGTCTTCGATTACACTGTTCTCTCTCAAGGATG
AATTGTAGAGTGATGCCGAGACATNCGAGTTGTATGCAAATCAACCAGTT
GCTCAAGGACCTTACGGATATATGAATATTGCAGAGATTTGGATTTACGG
TCGTCCTGAGTGAGAAAGTGTTCTCTCATTTTCATTTAGTTCCTCAAGAT
ATTGAAGATTGTAGGAACGATACTTTCATTCTTATGCATGGAATTTCCCT
TATTTAACTCTGAAAAGAACATCAAATATCGAAAAACCCTGTCATCTGTT
ACAAAACTCTTACCTATCAGATAGGTTGATAAATTGACTTATCAAATAGC
GATTTTTGGCATTTTAGCAGTTATCGAAGTACGAATAACTAAAAATCGAT
TCACTCGAAAACGGCAGGGGATTTGAGCGCAAATTTGTTTTGTCAATTCA
AGGAATTATTATCTATTANCTTTTTCAACATGTTACCACACCAATATATT
TCATATTTATTGTTGGGATTGTTTACAGTAATGATGGCAGATCCTTTGTT
TAATCGTCGGAATTCTTGTACACCACATATTATAAGTCCTGCTTTGTCAA
TTTCCTCTACTACTTTTTCAAGTTTTTCGTCATGGAAATTAGATCATTTA
GATCATTTAGATCATGCAAATTATGGGTAGATAAAAATAAAAACTGTTTG
AAAACTGATTGTGAGTCACAAATACTTAAGCAGGTTCTCCTCTGGCAACT
TCCCATCATATGCTTCCCCTGGTTCCCCTGTTGATAAAAGCCGCACCCCT
AGATTTCCAATTAACGGTCCCTTTCGCAAACCAACTTTTTAGCAAAAATT
TGATTTGTCAGNTCCATTCTAACAAATCAAATTAGACTTGCTTCCGAAAT
TCAGGAAAGGCCTTAACCCTTCGAGCATCTTCCTATCTTTTTACAAGGGG
AAGCATCTTGAAGGGGGGTTGGTATTTTACAGACCTGTCCGTATTTAACA
ATAGGGTTGACTATACTAAATAAATTACCTACACAGCTACATGTTTTGTT
ATAAGCAAGTGTCTGTCCCTATATCAGGCTCACATTATACTTAGCATTTT
ATTGCTCTCAAACAATAGAGCTAGAGCCATTGTTTAGGAACTAAAAACTG
AGCCTGCATATACTTATAAACGTTATGCTTATAAAAGGAAAACCATGTAC
TGCTGTTGATTCTGACATCTTGAATCTTTTACAATCAAGGTCATAATATT
TGAGAAAAAGGGAAATTCATCAAGAAGTTTTGAAACTACAATCGATTTGT
AATTGCTCTAAAGTAGGTTCAAAGGGTAGAGTTTTTAACTCTGAGTTTTA
ACGCTAGACTTAGGTTAAGACCTTAGGATCCAAAAGTTCAAAAACAGTCC
AATAAGGCCCAGAATATAGCCTGGAAGTCTGTCAACCCCTCCCAAATTGA
AATATCCGATTAAATTAAAGAGATAGCTCAAAATCGACGTTCTCGCCGGA
ACTTTAAATCTTGAAAAACGTTAAAATAACAGGAATTCTCAATATATTTC
AACCATGATTGTAGATGAAAAAATAAATTTGTTCTTATCACTCATATTCT
CATCATTTCGTCAAAAGTCTGAGCCTTAAAGGAAGATAACGACGCATGAC
AAGTTACGACCTCTGTTTTTTACCTGCGCATTGACTATTCAAAAACGCAA
TATTTCTTCTTTCTAAAGTTCGAAAATTTACGTCACATGGTGTTTTGAAT
AATTGACGTCAGAATTATTTTCGTTAAAAAATCACTGTATTTTAATCAAT
TTGTTGTCGGTCGAACACTAAAACCAAACCTTAAGTTTAATGAAATTGAT
TTGTTAAATAACAATATTTTGAAATCTTAGCTTTTCATNTGACGTCAGAA
TTATTTTCGTTAAAGAATCACTGTATTTTAATCATAAAAAAAATAGACTT
TTGATGAGATGAAATTGATTTGTTAAATAACAATATTTTGAAATCTTACC
TTTTCAAAGATTTTAGTACTTCTCCTAGTTCTGGTTTTAATTTTTTCAAC
CGTATTTTCCATTGTTTTTGCTTATGCTTTTGGGGCTTGCATGACCCGCT
AGGTTGTGCTATTTCGACATGATTGCGAATCAGTTTACACTATATTTGTT
TGTGTCGGGATTTCAATTGTTTATTTAACTTTGATATATATTTCCTAGCT
CTACGTATTTTAAGCAATTTAATATTGTAACGTTTTGATTTGATATTTAA
TTATTATTATTATTAAAATGAATAAAAAACAAAAATTTAAGCAATTTATA
TATTGTAACGTTTTAATTTGATATTTAATTATTATTATTGTTATTAAAAT
AAATAAAAAAACTAAAATTTAAGCAATTTATATATTATAACATTTTTATT
TAATATTTAATTAGTACTAGTAATAACATGGTTTGGAGGGTGATTTGGGA
TTAATAACCCCGAGGTTCATTGAAAATATTTCGAAATAGCCCGAACGTAG
TGAGGGCTATTTTGAAATGTTTTCAATGAAACGAGGGGTTATTAATCCAA
AATCACCCGAGAAAAGGGTTAAAAAGTTATTCTAAAACTTTTGGGGGATG
AATGACCGATTCTAGTTCGTCCACCTNGTTATTAATCCAAAATCACCCGA
GAATACCATGTTATTCCGCGTTAATTATATGGTCAAAAAAAGAATTGAAG
AACAATCAATCGTTTTTTTTTGTTTTTTTCGAAACTTATAAAAACATTCG
AAACTATAAAAAAACATTTGATTGACACTCTTATCTAGATTTGCTTAAAA
ATTTTGCACGATATTTTGTTAACCAATCAAAATGTTCTGAAGATATTGTA
CGATACTTTTCAACCAATAGAAATTGTTGTTTACATCAGGGCGATTACAA
AAAAGCCGGGTTATTACGGATTTATCGCCCCGCTCGTCCCTGACAAATCT
AAGCTAAATGTAATCAACCATATAATTATTATTATTATTAAAATAAATAA
AAAAACTAAAATTTAAGCAATTTATATATCGTAACGTTTTAATTTAATAT
TTAATTATTATTAATATTATTGCATTCGAAAAAATAAGTCACTGTTGGAG
CTTCTTCGATTCGAACGTCAAATCCTTTTTTGGACGGGGGTTTTATCAGA
AGGGTAGTGCTAATTTTCGCGCTAAATCATAGATAAAAATGAAATTTTAA
ACATAAAATTAAAACCACGACGTATCATCAACTGCTTTTTCGAAAAACAA
TAAAAGATTTGTCTTAAAACTGCACAAAATCCCTCTTTCATACTCGAATC
AACCCCCTGGTAAAATTTGAGAACAACAGCTCAGCTACCATCTTGTGTTA
TACACATTTTTCATAAACTCATTTAGTATAGTAAGATAAACCTTTATTTG
ATCAACTTTAATTTCTATTTTAGTGAAGGATACTTTTTAAACTGGTCAGC
GGTAAATATGAAATTTTGTGATGACGTCATTAGTATTGTGATGATGTTGA
CCCTCGCAGAAGATTTTTGACCATTCTAACCCTTTTAAGGCAAAAATGGC
CAGATTTTTCAAATTTTACACCCTAAGAATGTACTTTTTCTACCTTTTAT
TTTTATACCTACGGTAGTTCGTTTACCTTCAGTGTTCCTGAGGATTTTAA
AAAGCCTTGGGAAAGTAAAAAGCTGATCCTTACCGTCTAATAATACCTAG
CCTGGATATCCAAGCTCAAAATTTTAGAAAAAACAANGAGGATTTTAAAA
AGCCTTGGGAAGGTAAAAAGCCGATCCTTACCGTCTAATAATACCTAGCC
TGGATATCCAAGCTCAAAATTTTAGAAAAAACAAAATTTACCTCCCTCAA
CATACAAAGTTCTAAAATTATAGAGCTTGGTCTCCCTAGAGAATGAAAGT
GCAAACCCATGTTTCCGAAACTTTCTTAGCCAACCATAGCCTAGAAATCT
AAGCTATTTTGATTCAGTCACTTGGATAAGTCTGATGGTTAAGTTGTGAC
TGAATAACAGTATTCCAAGGCAAAATTAAAATCCGTTAACATAAAAATAT
CTTTAAAGTGCCGAAAACGCTATATTGCCATTAGCCGTTTGTCATATTCT
TGTGAATACGGGCTTAGTTAACTAGGCTAAGCCAAACCCAGGGCAGGCCA
AACAAAAGTTAATAAAAAAGAACCTTGCAAGATTTAAAGCTATTTAAAAA
ATCTAAAGTTTTAAAACAAAAGTCCATAAACAAGTTTACATGTGCCACCA
TGACCAACCATGTTTTCTTTGAAAATGAACTTGCCTCTGTTTTCTTCTTT
TTCATGTTTTCATGTAACAGAAAGCTCTATCTTCGCTAGCAAATGGGACT
ATCCTATTTTTGCTTCAGAATTGCTCCGCGCCGTGTAGATTGGTCCTTAC
GGCTTTAGCGAAGTGAGCGAAAGCAAGCGGACTGCATTCTCATCTGGAGA
ATGCAAATCTCTCTGGGAGACCAGGCTGTAAAGCAGAACTAGACTGTGAA
ATAGTTTACAGCCTGGATATCCAGGCTAAATAATACCTAGCCTGGGGGCA
ATTATAGCTTATTGATAGACTGGATGGCGCTGATAAGTGGCCCGGCGTAA
TTTGGCAGACTCATTTTTTGGCTTTGCTTAAGGTGGTAGCAAATATATGC
TACTAGATCCAGCCCCTTTTTGAAGAAAAAAAAAACAGAAAACAATGACC
AATAGACTTTTTTTTTAATTTTTGAGGTATTTACATGTTTTTATTATAGT
TTCAAAAAATTTGGTAGGATTTTAGGCCCGTTTTAGAATATATTTCATTG
ATTTGTTTTTGATATCCTCTAGTCTACTTCACTGAACTCAGTGCCATAAA
AATCATCAAAAAAGCAAAGTTCAGTCAGAAGTCGACCCAAGTCTAAATAA
TACCCGTGCACCTATCTTTGCCTCTTGGCGGTACTTGTTTTCAAATTTCA
AATGAGGTTTCAATTGCNTAGACTTTATCTCACTGCGAAAATGTTTAACG
AAATGTATGTTACATCCAACCTGTCAATCAGTGAATTTCATGAGACAAAA
TGAGACTTGTGAATTATTAGGTAATTCTGCACGAAGAAATTCGTCAGGAA
ATTCTCTATTTTCACCAGCAAATGGATGGAACCATTTTGAAACGGATTAT
GACAAGAAAACGGTGAGCTTTTGTTGTTCTTTTTTTAATAACAAGTTACG
GTAAGAAAATCCCCTAAATCTTGAATGAACGCCATTAAACGAAAAAAATT
GTGCCGGTGCTAATCCTTTCCGATAAAGTGTGTACCACGCACAACAAATG
GACCATAGGTGGGGCAAACAATCGGGGACAAAAGGTCTATAGACTCCCCC
AAAATGTCTTCTTGAAAAAGCGTAAGGTGAAAACTCATTGAACTTTCAAT
CTCAGACAAAATGTTGAGAGAGTTCGAGACAAAAAGAGCAGTTCCCCCAA
CTGTTGAGACTGCAGGGGTATCAAAAGATTTGAAGCCGCTAATAGAAAGT
TCAGTGTTTTCGATAGAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGGAATG
TCTTTAAGTACATCTTCCAATGCTTTTTGTTGCTTTGCCAAGTTATGTTG
TTGTTGCTTTCTTGCTGTAACATTCATGTTCTGCATGTTGTAAAGTTTGG
CTCGAGAAACAACGCCTATTTTTTCACGCGCCGGAAACTTTTGAGATAGG
TCTTTACTCTACGGATGTCAAATGATGAATCAAGGGAAAAAGGGACCTTG
TGGCTCCAATTTGGCCTAAGTAGCCCCCACCCCCGGGTGCGTCTCAAGAA
CAGTTTAGAATCACAACACTAAAAGCCTGCATCCAAAAAATGAGCAGAGC
CCAAGAATCATGTAAATTATACGATTAAATATCATCATAGCGATGCGCTG
CAGAAATAAGTGATATTTTCATAGCGGAATTTTATTTAATCGAATAGAAA
ATTTGGAGGAAACAAATTTGTTTAAGGAACTTTTTTTGGCGGGAACTAAT
TTTGGCGGGCAGCAAATGTCCTAAAAATTTTTTCAAGTTTGGCGGGAACT
TATTTTGGCGAATAGTGTTTTTTTTTAATTTTTGCGGGAACTAATTTTGG
CGAATGACAGCGTAAATCTGCTCTATTAATTTCGCATAGCGAAAGTATTA
CAATAAAGGCTTTCGCGGTGGCGGCGGTGCGGGAAAAAAATTAGAAAACG
AAAGTAGTTGAAACTTCTAGAACATTCTCGAATATTCTAAAATATGGACT
CACTCGCTAAAATAAAATTTAATGATTCCAGTCTACAAGTGCAAGGTAGG
TGGAACCAAGCATTCGTAAACATTGCTCGTTTTTCAAAATGGCAGATTCG
ATCATGCTGTCAGACTTGCTCTGGATTTTTGTATTTTTATCATGTTTTTG
ATGTTTTTAGAGTACTTAAAGAGGTTTATATTTCTTTTAGCATAGTATTT
TATGTTTGTGTAGTTAGTAAATGCACCAATAAAGTGATAGGAATCTTACA
AGTAGAGTTGCTCTTGAACATCACTACACACAACAACAATAATAAAGACA
ACACAGACAGGTATGATCTTCATTTTTACAAGTAGAATTATTTGTTAATA
TTTGATTAAGTTGTGTTGTAAGACAGATTATCATTTACTCAGTATTCCAC
AGAAGAATTTATAGCAGGGGGTGTCAATCTGATAGAAGTTACCTTTTTCT
AGCTAGGTAGGTGCAATGTGTTAAATTGTCATTTTCCAGGCTCAAAATGT
CAATCGATGACTAATTGATAACCAACCGATTGATTGGATGTCGATTGATT
TCGATAATCAAGACTATTCTAACTGATAATAGATTAGTTTTTTGATCGAT
TGGACTCAATTGGCTGTCAATTGTGATGAATCGAACATCTTTAGAATAAA
TCGATGGAAAATCGATCACAATTACAATTGACAGCCAATCGAGCTTCCGG
TAAAATCTTGATTATCAATTGTCTATCGATTATCTAAATCAAACGATATC
CAATCCGTCGTTTATTTATCGATTAGTCATCGATTGGAAAAATATACCTT
GATTGCTACGCAGGCGTCAAAGTTTAGGATTCCCACTCACAGCGGTTCAC
TTGGAAAGTGTACGAGCCTTCACTCGGCCAACCCAAATATGGATGCGAGG
GAAAACGGCAAGACTGTTGTTGAAGTCTATATCAAAATCTTACTGTAAAA
TTTTTATAAACTTAATTGAATACTGTACAATGGAGATTTGAGTTTTGATT
GATCTGATTGAATACTGTACAATGGATTTGAGTTTTGATTGATCAAATAT
ATAACTCAAAAGACAAACTTTTTTATGCAGTGCCAGACTCCCACTCAAAA
CAATTGATTCATTTTCTATCAATGACACATCGATAACAAATCAATTGACT
GGATATCAATTTGTTCTGGTACCGTTGGTACTAAGTAGGTAAGTTGGTCT
AATCTGCCTAATGTCAACATCCCCCTTCTAATTTCAACATACTTCTTTAG
AGATAGGAATAATAGGAAGCTTGGGATCACTTATAGACAAAAGGTATTTT
CTTCTCTGATAGCTAAGCAAAGAAAAATAGTTTCCATCAGTGATTCTGAC
CTTCCAATTATTCCTTTCTTTAAAGAAGTATGTTGAAATTAGAAGGGGGA
TGTTGACATTAGACCAACGTACAGTAATTGATAGGTATTCGATAATGTTA
TGCTATCATTCAAATCCAATCAATGATCAATACTCAAAATTTTCTAATGG
GCTTCATTACCTATCGAATATTGGAACAAATTGATTTTTTATTGATCAAA
AAAAGAAATNTACCTATCGAATATTGGAACAAATTGATTGGTTATTGATC
AAAAAAAGAAATGGCTCCATGTCTCAATGATATGGATGCAAGGCAAGCAA
CAGCAGTAACAAAGTAGCAGTAGCTTTAAGGTAAAACATTTTTGCAGAAA
AAAGATTGGGCTTTTTAAAGATTTAAATTAATTTCCATCAAATTTAAAAT
ATTTATGTAATTTTCCAAATTTGTGCTTTTCGAGCCTTGAAACAGTTTTT
TTATCTCAAAGTAATATTTTAATTTTAATTTTTCAATGCATCAGCAAAAT
AAATGCCCGCCAAAGTTGATTGTGTTTGATTTTGTTTGATTGAGATTTTG
ACTTTTATTGAGTATTTATTATGTATCTCAAAAGTATGTAGATACTTTAC
TTTTCAAACAAATTCTCAGCATCAAGTTATGCTAAAGTAGAAAGTTATAT
ACCGTTGGAATTGGACAGATATATTAGAGGTTACCAATCTATATGACTAA
AAAGTTTTTGAAATATTGAGAAACTATGTTTTTTGATTTATTTATATACA
AGGTTTAAACATTGTAACATTTTTGTAAATAGTCAAAGATATTGGTATGA
TATTGATATGTAACTTGGCCACACTGGGACAGTTCACATTTGGGTGACAA
AATAATGCAATAAATAGAACGGGGCTAGAGCTTTATTATAAAGCTCTTAG
CCCCGTTCTATTTATTGAATTATTTTAATGGTGAAGGTAGGGGGGGGGTA
CTTAGGCATAAATAGGTGCCAGGTATGTGCTGATGCTAAGGTTCTGTTTT
TGACCTTCCCAAGTCTCTGAATTATTTAAGGTACGAAACTTGAAAAGTAA
TAAAAAGCTCTAGAAGGTTAGAAAATTTTTGAAAATGTGCTCTAAGAGTC
ACTTTTTCGCCTTGTCTCTGTAAGGGTAACTTTATTCTCTGTTAGAGCCA
GTTTTTCTCAGGTCCGATTGACATTCTTCAACCCTATTATTTCCCAGTCG
TTTAATATGATTATTTCATCTATGAATAATAGTAGAGGCCACTATGTCTT
CCCGTGTGTAGCAGCTTGTGCAAAGAGTTTTTATGATTGAATATTGTTCC
TTGAATGAGGAAGATCAAAATTTGAGAGGTGAGCCAGGTGTTACCACCCG
TTGCCATGGAAACTGACGTCATTGGTTACTATGGCAACCAAAGTAAAAAG
TCGTCAAAATTGAAAAAGTTTTGTTCCATTCGAAAGAGCATCAAAAAGAG
CAAGGAAAAGGTCACAATCTATATCTGAAAATAAAAAAAATTGATATTTT
TAAATTTTGCCTGTAATGTGCTGGCTGGGCGTACGGTCTTCTTTCCAAAA
AACGAAAAATTTTAGAATTTTGACAATTTTTATTTTTCGATGACGTCATC
GTTTCATGACGTCATTTTGCCTTATTTCCTTAATGTCTCCTGATATATTC
ATTTTCAGATATAGGTTGTGACCTTTTTCTTTATCAGTTTTTCATGCTCT
TATGAATGAAAAAAAATTTTTCAATTTTAACGACTTTTTACTTTGGTTGC
CATAGTAACCAATGACGCCAGTTTCCATGGCAGCGAGTGGTCACACCCGG
CCACACCTCTCAAATTTTGATCTTCTACACTCAAGGAACAATATTCAATC
ATAAAATCCCTTTGCACAAGCTGCTGCACACGAGAAGCTTTTTCGCGACA
TAGTGGCCCCTACTATAATCGAAATTTTCGACTCTGAGTCGTCTTGTTTT
GCCTTATTTTGAGCAATTTTGAAGAATTTCAGGGGGGTTATTTAGGCAAG
GAAAGTTAGTTAAGTTACATAACTTTGCATCGAAGATAAAAACGTGTTTA
TAAAAATTCTATTACAGAGCAATTACAGTCTTT

Coding sequence (CDS) from alignment at sc0000550:1800..16282-

>TCONS_00025880 ID=TCONS_00025880|Name=TCONS_00025880|organism=Clytia hemisphaerica|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000550:1800..16282- (Clytia hemisphaerica)
AGCAATTACAGTCTCCTACAACAACAGTATGCGCAAGGAAAAGTCCATGT
TCCGATTATCATGTTTGCATCGATGAATGTTATGGATCCTACAAATGTGT
ACCACCTCCTTTGCTTAACATGTCTGTTGAAAAAAGGTCTTACAATGCAC
CTTTACATTTTATTGAGCAAATTGGTTTTGGTTTATTCCCAATGGTATAT
TGGCAAAGAAACACAACACAATACAACAAGTGCTGACGATACTTCGAAAC
CTGTTGTTGCAACCTCACCTATCGAATGTGCTCTTAAATGTCAAAGAAAA
TCTAAACTTAGTTTTTTTGTTGAAGAAGAAAAACAATGTTTTTGTGTGAA
TGATGAAAATGAAGAAATTAATTCGAATCATCAAACACCAGTGGATGGAG
CACTTTACAAAGAACACGGGAGCAATTACAGTCTCCTACAACAACAGTAT
GCGCAAGGAAAAGTCCATGTTCCGATTATCATGTTTGCATCGATGAATGT
TATGGATCCTACAAATGTGTACCACCTCCTTTGCTTAACATGTCTGTTGA
AAAAAGGTCTTACAATGCACCTTTACATTTTATTGAGCAAATTGGTTTTG
GTTTATTCCCAATGGTATATTGGCAAAGAAACACAACACAATACAACAAG
TGCTGACGATACTTCGAAACCTGTTGTTGCAACCTCACCTATCGAATGTG
CTCTTAAATGTCAAAGAAAATCTAAACTTAGTTTTTTTGTTGAAGAAGAA
AAACAATGTTTTTGTGTGAATGATGAAAATGAAGAAATTAATTCGAATCA
TCAAACACCAGTGGATGGAGCACTTTACAAAGAACACGGGAGCAATTACA
GTCTCCTACAACAACAGTATGCGCAAGGAAAAGTCCATGTTCCGATTATC
ATGTTTGCATCGATGAATGTTATGGATCCTACAAATGTGTACCACCTCCT
TTGCTTAACATGTCTGTTGAAAAAAGGTCTTACAATGCACCTTTACATTT
TATTGAGCAAATTGGTTTTGGTTTATTCCCAATGGTATATTGGCAAAGAA
ACACAACACAATACAACAAGTGCTGACGATACTTCGAAACCTGTTGTTGC
AACCTCACCTATCGAATGTGCTCTTAAATGTCAAAGAAAATCTAAACTTA
GTTTTTTTGTTGAAGAAGAAAAACAATGTTTTTGTGTGAATGATGAAAAT
GAAGAAATTAATTCGAATCATCAAACACCAGTGGATGGAGCACTTTACAA
AGAACACGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014550XLOC_014550Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025880-proteinTCONS_00025880-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025880-exon-sc0000550-1575043694:15971..16282TCONS_00025880-exon-sc0000550-1575043694:15971..16282Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1575043694:14953..15046TCONS_00025880-exon-sc0000550-1575043694:14953..15046Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1575043694:1800..1815TCONS_00025880-exon-sc0000550-1575043694:1800..1815Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1510915933:15971..16282TCONS_00025880-exon-sc0000550-1510915933:15971..16282Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1510915933:14953..15046TCONS_00025880-exon-sc0000550-1510915933:14953..15046Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1510915933:1800..1815TCONS_00025880-exon-sc0000550-1510915933:1800..1815Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1491911889:15971..16282TCONS_00025880-exon-sc0000550-1491911889:15971..16282Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1491911889:14953..15046TCONS_00025880-exon-sc0000550-1491911889:14953..15046Clytia hemisphaericaexon
TCONS_00025880-exon-sc0000550-1491911889:1800..1815TCONS_00025880-exon-sc0000550-1491911889:1800..1815Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000550supercontigsc0000550:1800..16282 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3699	0	0	0	0	0	0	0	0	0	0	0	0.456861	0.474462	0.103437	0	0	0.256319	0.885296	0.759404	0.612027	0.382079	0.222833	0.363843	0.894152	0.319204	3.08743	0.731231	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025880 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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