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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025807 ID=TCONS_00025807|Name=TCONS_00025807|organism=Clytia hemisphaerica|type=transcript|length=1071bp
gtaaataaggaactcgataaggaactttgaggctgaaattctctgtaaaa
ataaggaactccaggctcagagcaaagttaaggttccttataaaagaaaa
acgtgtaaaagCTGATATTTTCACGAAAGATAAAGGAATCTTTGCAATTA
AAGCAGCAATTTTCTAAACGATAAAGTCCAGCTTGAGTTATGTGGGGCTT
ATGTGCGTGTTGAAATAAAGGAAAGTATGGCGGTGTACAAGCTGAATCGG
TGTTGGTTTTGTTTTGCAGGGgataaagtttctttttaaggCGGTTGAGT
TAGAAGATGTAAGGGTCAACCTTTGTAACATTTTTACACAAGAGTTTGGC
AATCGGTCACAAAGTTATTTAAGTAGATTTCGTTTGTATTCTACAGATCT
GTTCCTATTTCTCAGGTTTTTAGAACCTATAACATCAGTTAATTCCCGGG
AGGGGGTACTCATTTTCTAAAAACTTGCAATTCAGCAGTCCTCAAACACA
TCCTTATAGTttatccagctaaaagaagatcCTTGTAGTgcaatctatca
aaagtacacccttaaaGTGAATTTCGAGGAAATGTCGCGAAACACCCACC
ATTAAGATTAAGAGCGGTACATGCCGTCAGTTTGCGGGAGTTAATTGCCT
TTATGATTTCTACCATGATGCATAAAATGTAGAGGGGGGGCTAAGAAGCA
AAATATCGAAGAAGTTTCGCATGcaaattctcaataaatttatTGCACAA
CAGACAACATTTATTTAATAAAGAGGAGTCAAAGccttccccacagcata
gatttttaaaataatttaaaatatttttagcctAACAGCACTGCCCACTA
CCAAGCTAGCACGCAGTATTTTTAAAAGATACAGCCCCAATCGAGCAATG
ATTGAAATGGTTTAGCACCCCTTCCCCTAAGCTCggggggtgcattctat
gtGATGAGCTCGTTGAACTCACTGGTGGGCTGATTAAGGTAGAAAGTGAG
TTTTTTCAAACCCACCAGGTCGATATTAGCCTTCTATCTGTTTGTCTTCT
TATCAAAGATTTATCGATAAT Run BLAST on NCBI transcript from alignment at sc0000547:12045..13115 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025807 ID=TCONS_00025807|Name=TCONS_00025807|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at sc0000547:12045..13115 (Clytia hemisphaerica)
ATTATCGATAAATCTTTGATAAGAAGACAAACAGATAGAAGGCTAATATC
GACCTGGTGGGTTTGAAAAAACTCACTTTCTACCTTAATCAGCCCACCAG
TGAGTTCAACGAGCTCATCacatagaatgcaccccccGAGCTTAGGGGAA
GGGGTGCTAAACCATTTCAATCATTGCTCGATTGGGGCTGTATCTTTTAA
AAATACTGCGTGCTAGCTTGGTAGTGGGCAGTGCTGTTaggctaaaaata
ttttaaattattttaaaaatctatgctgtggggaaggCTTTGACTCCTCT
TTATTAAATAAATGTTGTCTGTTGTGCAataaatttattgagaatttgCA
TGCGAAACTTCTTCGATATTTTGCTTCTTAGCCCCCCCTCTACATTTTAT
GCATCATGGTAGAAATCATAAAGGCAATTAACTCCCGCAAACTGACGGCA
TGTACCGCTCTTAATCTTAATGGTGGGTGTTTCGCGACATTTCCTCGAAA
TTCACtttaagggtgtacttttgatagattgcACTACAAGgatcttcttt
tagctggataaACTATAAGGATGTGTTTGAGGACTGCTGAATTGCAAGTT
TTTAGAAAATGAGTACCCCCTCCCGGGAATTAACTGATGTTATAGGTTCT
AAAAACCTGAGAAATAGGAACAGATCTGTAGAATACAAACGAAATCTACT
TAAATAACTTTGTGACCGATTGCCAAACTCTTGTGTAAAAATGTTACAAA
GGTTGACCCTTACATCTTCTAACTCAACCGccttaaaaagaaactttatc
CCCTGCAAAACAAAACCAACACCGATTCAGCTTGTACACCGCCATACTTT
CCTTTATTTCAACACGCACATAAGCCCCACATAACTCAAGCTGGACTTTA
TCGTTTAGAAAATTGCTGCTTTAATTGCAAAGATTCCTTTATCTTTCGTG
AAAATATCAGcttttacacgtttttcttttataaggaaccttaactttgc
tctgagcctggagttccttatttttacagagaatttcagcctcaaagttc
cttatcgagttccttatttac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025807-exon-sc0000547-1491911889:12045..13115 | TCONS_00025807-exon-sc0000547-1491911889:12045..13115 | Clytia hemisphaerica | exon |
| TCONS_00025807-exon-sc0000547-1510915933:12045..13115 | TCONS_00025807-exon-sc0000547-1510915933:12045..13115 | Clytia hemisphaerica | exon |
| TCONS_00025807-exon-sc0000547-1575043694:12045..13115 | TCONS_00025807-exon-sc0000547-1575043694:12045..13115 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000547 | supercontig | sc0000547:12045..13115 . |
Blast
The following BLAST results are available for this feature:
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