TCONS_00025666 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025666
Unique NameTCONS_00025666
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length848

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025666 ID=TCONS_00025666|Name=TCONS_00025666|organism=Clytia hemisphaerica|type=transcript|length=848bp
cagaaataaaaaaataaataaaaatgtttctaAATGTTTAGTAAAAGTTC
CAAAAGGAAGACATATATTATTTTTGATCAATACACATGTAGCCGGATAT
TTGTTCCCCTGGACTGAAAAATCTATTTGTTTATAATCCATAATGGCTTC
TCCAATGTTTGGATGTGTAATTCCTGGTAGAATGCCTTTATTTGACGCAC
AACAAGTGAGTGAGAATCAAGTTGTCTTTCAACTCCCACAATGCAATTCG
ATAAACCATGTGGTCCTCTTCATGACTGGATCCCAACCTATCCCACAAGG
CTTTGCAGCAGCAGTTTATTTGTGTTGGCCCAAACCTCAACCGGCTTGGT
ATTTGCTTGGTTTCCTTGGTAACGAAAAACCGAGTGTCATCTTTAAAATT
GCAAAGCCGAAACAAGGGACAGAGCAAGCAAATCTTTCATCAGGGTGGCA
AACAAATTTATCCTCCGATTCCGATATCGCACAAATCGGGATCGCAATTG
AGCCTGTATCGGAGCTTACACAGAAGACACCGTTAGAAAATACACAGGCT
ACATCTTTAAGTACTTTTGTTCAGTTTACGCAAAAAATGGCATCCAATCT
GTTCAATTATTGTTCGTCTTTCGCTGTCACACAAAGTGAAATGACACCGC
AACCGACAGAAACTTTTATACCTTTAAACACCATTCAAAAATGGTatcaa
acttttgaaagacGAATGAGCAGGGAtccaaatttttggaaagatcTTTG
ATTGATAGTTTCCAGGTCTCTTCGATTGTGCCACATGGTAGTTGAACCAT
ATCGACCTTCTGGTAGAACTTCAAGTAATTATCACCAAGAATAGGAAG
Run BLAST on NCBI

protein sequence of TCONS_00025666-protein

>TCONS_00025666-protein ID=TCONS_00025666-protein|Name=TCONS_00025666-protein|organism=Clytia hemisphaerica|type=polypeptide|length=202bp
MASPMFGCVIPGRMPLFDAQQVSENQVVFQLPQCNSINHVVLFMTGSQPI
PQGFAAAVYLCWPKPQPAWYLLGFLGNEKPSVIFKIAKPKQGTEQANLSS
GWQTNLSSDSDIAQIGIAIEPVSELTQKTPLENTQATSLSTFVQFTQKMA
SNLFNYCSSFAVTQSEMTPQPTETFIPLNTIQKWYQTFERRMSRDPNFWK
DL
Run BLAST on NCBI

transcript from alignment at sc0000542:38336..45572+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025666 ID=TCONS_00025666|Name=TCONS_00025666|organism=Clytia hemisphaerica|type=transcript|length=7237bp|location=Sequence derived from alignment at sc0000542:38336..45572+ (Clytia hemisphaerica)
cagaaataaaaaaataaataaaaatgtttctaAATGTTTAGTAAAAGTTC CAAAAGGAAGACATATATTATTTTTGATCAATACACATGTAGCCGGATAT TTGTTCCCCTGGACTGAAAAATCTATTTGTTTATAATCCATAATGGCTTC TCCAATGTTTGGATGTGTAATTCCTGGTAGAATGGTAAGAATTTCATTTC AGAGGTTTCTCAAATTTTGTTAAGTTACtccttaggtgccaaataaacgc accccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNccccggacaacccaaattacccctggacaaggca aattttgatgatttttcgctaccccccggacaatatatcctccacccccc atgtacggacattttttggaagagcccattttcaGAAACGTGTTTGAATT GTTCACCTTTTCCTATGCATAGCCTTTATTTGACGCACAACAAGTGAGTG AGAATCAAGTTGTCTTTCAACTCCCACAATGCAATTCGATAAACCATGTG GTCCTCTTCATGACTGGATCCCAACCTATCCCACAAGGCTTTGCAGCAGC AGTTTATTTGTGTTGGCCCAAACCTCAACCGGCTTGGTATTTGCTTGGTT TCCTTGGTAACGAAAAACCGAGTGTCATCTTTAAAATTGCAAAGGTATGT atgctctttttttataagaatagtgtactttggttgagggtcaagtattc ttaggaaattgccaaaattgaaggtgaaatattcttaatttcctaatttt tggtCCTATTATTAAATTAACcgttgttcgtccgtccgtccgtccgttcg ttcgtctgttgcaaGCTTTTCTCCAGATTGGctcattttcgatttttctg attttttgttcaaagaTCCCCCGGATCAGTTATAACATTCTGTATTAAAA ACCAAGaattaaaaactttatttcttTCATACATTCAAGTTTTctcctat atcaggctcgcatgatgcttaacattctattgttctcaaagaatagagcc attgtttaggcaCCAAAAACTGCGCCTGTATATGCTTATAACGTTATATg cttatttaaaagaaaaaacatgtagccgAAACAAGGAACAAAGAAcaagc aaatatttcaatttccattttcgcgaaatttgtGAACCAGACAATACTGT GGTGCGTATCTTTTCCAAAACTAGCAAAGCtaacatatttttattttcat tcatagCCGAAACAAGGGACAGAGCAAGCAAATCTTTCATCAGGGTGGCA AACAAATTTATCCTCCGATTCCGATATCGCACAAATCGGGATCGCAATTG AGCCTGTATCGGAGCTTACACAGAAGACACCGTTAGAAAATACACAGGCT ACATCTTTAAGTACTTTTGTTCAGTTTACGCAAAAAATGGCATCCAATCT GTTCAATTATTGTTCGTCTTTCGCTGTCACACAAAGTGAAATGACACCGC AACCGACAGAAACTTTTATACCTTTAAACACCATTCAAAAATGGTatcaa acttttgaaagacGAATGAGCAGGGAtccaaatttttggaaagatcTTTG ATTGATAGGTTTGTCATTCTTTATTACTTAATTATTATTCATagactttt taaaataattttgcacGATTCACACAAAAGATGACATTGAATTCcttttt aatagaccttttcacgaacatcacttgcctcgtgttcaaacaattaccat ccatggtgattatgtctcttgagacattaaatgatctttttatatggttt taataaaatccactgggagttaatcaGCATCGcattaatttcaaaacgag gcaagtgatgttcgtaacgtaatttatgaaaaagtgtaTTATTGCTCGTC AAACGAGATGAGCAAACTTCATCCATCAGAAATGTCAAAATTGGGCACAC ATTTcaatatattcatgatatgcacttcagacattacatcacgggcccaa tagctgattggttgcaagtgacgtaaaatcagtcaaccaatcagctgctg GGTCCgtagaagccattgcaatggtgcatataaGGAATCAGCCAACACAT TTATGTAAAAGAACACGATTTATTCTGACAGAAAGgaacattttttaaaa gttttttgggTAATTGgacttttctagaaaaaattgaatatagggGGTAG GGGATATAACACTTTTTGGAAAgttacccccggacattgtgacttttgac ccccggacattgtgacttttgacccccggacagcaggtctaagcCCCCAG NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccggaca agtaTTAGTTGACCCCCCTGGATATTCAAAATTACTCTCAAACAGAGAAA AAtcacccccaaacagagcaagtttaccccggacaatatatcctacaatc cccccatgtacgaacatattttggaagagcccattactCTAGATTTTCGT CTAAAGAACCGATGATGGCGTTCTCTAAGAAAAAGGAACCTTTATGGCTC ACACATATCCGGTATTGTTAAAGCTTTGCGTCCTAGAAGTATTTTGAGCC GCTAAAAATTATTCgtggttttttaaattttgcagggaatttccctttta tcTCAAATATCAAGACTTTTATTACTTCAaccggattaactttcgcgaga ttTGATTTTCGtgttttcgcgaaaataagacTCGGAAGATCGCGTGATAT TGCTGACTTGCTAAATTTAATCCAGGCGAAATTTTCGTGATCAGATTTTC AGCGTAAAAAACACTGTACATTTACTACTTTTGGCGTTTAAAGGGCTACC ttcaacaaatttttgccagattcgcgaaatttaatacgcgcgaaattttt caaaagactgatccgcgaaaataaatccaggaaatttctcgatttttttt gctcaagaAATTTATTCTCGTGAAAATTTATCAGGttaaacccagctggc acacaacgttgtttcaacgtttttctaacgtcatatggacgttttgaacg ttagaaaaacgtcgaaagaacgttgtgtgccagctgggaagtaGATGTCT AAGGATCCTTGGTGACCAAACAATCGCCGAGTTTTAGATGAAGATGCTCT GTAGGATTATGGACTGGCTTCAAATAAATGGGAGggaggttggaaaattt tcaaaatcttaataaacgggggagaCCTGAATGCCGGGAGGGGGcgtgga acctaagagtaatatgaaaagaaacaaaaataatcttcaggttaaaaaaa aaattttaagttaTAAGATTACTACAGGgtaaaattataataaaaaatac attttaaaatttttgtaataCAGAGTTGAACAAACGATCTCAAACCACGT TCacacgttacggttccgtttcgctccaaaacaaaatgaagccattctat tgaataataaattcaaactttacgtcacttctaaccaatagaatgacttc atttcgtttcggggTGAAACAACCgttacgtgcgaacatggtgTCATTTT CGAATAGTAATTGTTATTGTTCTATTTTGAACATTAttactacagttgac gctctctaattcgacgttctactattcgataggctccctctttcgatgaa atttaaaatccCCGTCAacaaaaactctcataaacaacgctcccttattc gataagctcccttattcgataagctcccttattcgataagctcccttatt cgataagctcccttattcgatgaaaatccgattcccctgttgaagatcga attagagagcgtcaactgtatactTACAATCCAAAAGTCTCCTCAACAAT CATTCTCCGAACTGATTGGTTCATTTGATTCAATTGCATCATAATattga gtttcaaccaatcagattgcagacttttggattgttaaccCTAACTGCGG TATCattagtgagtttatgtatttgcacttttgaggacggtggaatgact gaaacgatttgGGAAAACccacagttctgacccgcaaaagcGAGGACGGT TGGGAAAAGTGCTGATTTTCCGTTGTccttagcctatactagacgtcacc cgcgtttttttacgcaattcacgtctattccactttgcgatcaggttttc gggctctaaaccttcgattttttgacgtcatttttaacttttgaaagctt ttgaaaGTAGCGAAAAAATCGAGTTTGCGTCAAAggacttgaaaggcttc tatttttccaaaatcgttAAAGTGGAGCTcactaaaggccggtctccact ttcgcgcgacatgagcgaaaactttttgatgtttctgtaaggtcattggt cgattgaaaaatgaagcaattccatcaactttttttttgtttacgcgaaa cttttttatgacttaATCTTTTCTTCTGGCAAAAATGgctaagaaaaaaa ctgtcgcccattttgCGCGAAAGTGGAGTCCGGCCTTAAgaaatggaatg aaaaatcccggttttttgtgaggtgctcgctacgtcgtcctcagtcagtc aggatgttGACTAATAAGAAGATAACCGTTTCCGTCGCCGAAAAACACAG ATATACAAACTCGCTACTCTTCcatgcttaattgtagggggggtTATTTT CCATTTTNATACAAACTCGCTACTCTTccgtgcttaattgtagggggggg gttattttccatttttaaccCCAAAATTACTTATAATGACCCTTAATGAA GCCCCCCCCCATTTCATgactttttcccaaaaagtgttaaaaaccTTCAT TTCGTCGGTAAATTCACTTAAATCACTCCAATATTACGTAATCATGACCC CCCctcaatttcatgatttttctaCCCCGTCCCTACAATACactttttcg aagtttttttacagtcgaaaaggtgtattaatcACAGAAGagtgtttaaa ttcaaaacagGAGTNccgtagccgccaattgccgcgcgggcattctCTGT CCGCTttactaaaaccgtcccagtccttttttcgcacatagaggcaatag aaaaatgtttcaaaaaatgattggattgagtttagggggataattaaata attaagtggcacgcgcctgaccgcgcgaagacagtcgaaaaggtgtatta atcACAGAAGagtgtttaaattcaaaacagGAGTTGTCTCGATGTTCCTC CCTTTATATTCCCTAACAATGTTTCGGAAGATCGAAGAAGGATTTTGGAA CTTTGATAAGGTCAACCCAATGCGAACGCCACATCTGTTTGTTGCTGGAG CCATCTTTGAATTCGTTGTCGATTGTTAGGACAGTGGGTATCAAGACTTC ATTACCTTCTTCATCCTGTTAATGAAATATGTAATCTTAGGTTCAAAATa aacgacccccccccccccttgttaacttttcgaaaatttttaagaatatt ttcagctgtcaaagagaaggccccttatttgcccataatagcctgatttt agcctatatttaccttattttgggttttcagaagtacaattttcaACTAG CAATTAGCTCCCTCCCGcttattaaaatctcgaaaattttccaacccccc gtttatttggaacctaaaagtaataattaaaagaaaaaatccggaacgag tgaaatatttccatattgtacgagcaaatgtctgataactggtttatcgg tgacccaaaaaatgcactttctGTGTTGGAAAAAGCTCAGAGCACTTTTT TTGTAAAGTGAcattagattgcttctaccgctacgggggaaggggggtct tcttaaaaacgtatgcttgcgtacaggggaggggggggggtatgCGTTAT TTTATCATGgcccccccaatattttgcaaagtaattttttatactttaaa agattttacatataccgtttagaggggtgaaataagggtgaacagtcgaa aattttcttcgtcgcccaaccatggtgggcgacatatttttttggccccc tcaattccattcgcacgccgggggccatgttTATCACAAGCTACAATGGG CTATTttagaaatagtctgtaccttATGTTGAGGAGATGTGGCGTCCAGG GtcgtctggaaaataaaaaaaaatccagggtggtacGGTCAGTAAAATca gattgaaaattgaaaaaatggtcTAAATAATTGGGAGAAAAAATCCAAGG TGGTccagaaaaattggaaaaaaatccatggGGGGATCACCTGTTTAAAA ATAGATCTCCTCAACAAAGGGGgtacaaattctggaatggcccaattcaG TTAGCTCAATTCAGCGAAAAAAACACTAAGCAATGcgatttttaacataa aactTTAACATAAAGTACAAAATCTTACCTTGACTCTTTGAACAACTTGA ATGAGCTTTGACAGTTCATCTCCATATTTGATTCGACCATCTTGTAGTTT CCAGGTCTCTTCGATTGTGCCACATGGTAGTTGAACCATATCGACCTTCT GGTAGAACTTCAAGTAATTATCACCAAGAATAGGAAG

Coding sequence (CDS) from alignment at sc0000542:38336..45572+

>TCONS_00025666 ID=TCONS_00025666|Name=TCONS_00025666|organism=Clytia hemisphaerica|type=CDS|length=1827bp|location=Sequence derived from alignment at sc0000542:38336..45572+ (Clytia hemisphaerica)
ATGGCTTCTCCAATGTTTGGATGTGTAATTCCTGGTAGAATGCCTTTATT
TGACGCACAACAAGTGAGTGAGAATCAAGTTGTCTTTCAACTCCCACAAT
GCAATTCGATAAACCATGTGGTCCTCTTCATGACTGGATCCCAACCTATC
CCACAAGGCTTTGCAGCAGCAGTTTATTTGTGTTGGCCCAAACCTCAACC
GGCTTGGTATTTGCTTGGTTTCCTTGGTAACGAAAAACCGAGTGTCATCT
TTAAAATTGCAAAGCCGAAACAAGGGACAGAGCAAGCAAATCTTTCATCA
GGGTGGCAAACAAATTTATCCTCCGATTCCGATATCGCACAAATCGGGAT
CGCAATTGAGCCTGTATCGGAGCTTACACAGAAGACACCGTTAGAAAATA
CACAGGCTACATCTTTAAGTACTTTTGTTCAGTTTACGCAAAAAATGGCA
TCCAATCTGTTCAATTATTGTTCGTCTTTCGCTGTCACACAAAGTGAAAT
GACACCGCAACCGACAGAAACTTTTATACCTTTAAACACCATTCAAAAAT
GGTatcaaacttttgaaagacGAATGAGCAGGGAtccaaatttttggaaa
gatcTTTGAATGGCTTCTCCAATGTTTGGATGTGTAATTCCTGGTAGAAT
GCCTTTATTTGACGCACAACAAGTGAGTGAGAATCAAGTTGTCTTTCAAC
TCCCACAATGCAATTCGATAAACCATGTGGTCCTCTTCATGACTGGATCC
CAACCTATCCCACAAGGCTTTGCAGCAGCAGTTTATTTGTGTTGGCCCAA
ACCTCAACCGGCTTGGTATTTGCTTGGTTTCCTTGGTAACGAAAAACCGA
GTGTCATCTTTAAAATTGCAAAGCCGAAACAAGGGACAGAGCAAGCAAAT
CTTTCATCAGGGTGGCAAACAAATTTATCCTCCGATTCCGATATCGCACA
AATCGGGATCGCAATTGAGCCTGTATCGGAGCTTACACAGAAGACACCGT
TAGAAAATACACAGGCTACATCTTTAAGTACTTTTGTTCAGTTTACGCAA
AAAATGGCATCCAATCTGTTCAATTATTGTTCGTCTTTCGCTGTCACACA
AAGTGAAATGACACCGCAACCGACAGAAACTTTTATACCTTTAAACACCA
TTCAAAAATGGTatcaaacttttgaaagacGAATGAGCAGGGAtccaaat
ttttggaaagatcTTTGAATGGCTTCTCCAATGTTTGGATGTGTAATTCC
TGGTAGAATGCCTTTATTTGACGCACAACAAGTGAGTGAGAATCAAGTTG
TCTTTCAACTCCCACAATGCAATTCGATAAACCATGTGGTCCTCTTCATG
ACTGGATCCCAACCTATCCCACAAGGCTTTGCAGCAGCAGTTTATTTGTG
TTGGCCCAAACCTCAACCGGCTTGGTATTTGCTTGGTTTCCTTGGTAACG
AAAAACCGAGTGTCATCTTTAAAATTGCAAAGCCGAAACAAGGGACAGAG
CAAGCAAATCTTTCATCAGGGTGGCAAACAAATTTATCCTCCGATTCCGA
TATCGCACAAATCGGGATCGCAATTGAGCCTGTATCGGAGCTTACACAGA
AGACACCGTTAGAAAATACACAGGCTACATCTTTAAGTACTTTTGTTCAG
TTTACGCAAAAAATGGCATCCAATCTGTTCAATTATTGTTCGTCTTTCGC
TGTCACACAAAGTGAAATGACACCGCAACCGACAGAAACTTTTATACCTT
TAAACACCATTCAAAAATGGTatcaaacttttgaaagacGAATGAGCAGG
GAtccaaatttttggaaagatcTTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014408XLOC_014408Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025666-proteinTCONS_00025666-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025666-exon-sc0000542-1491911889:38336..38519TCONS_00025666-exon-sc0000542-1491911889:38336..38519Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1510915933:38336..38519TCONS_00025666-exon-sc0000542-1510915933:38336..38519Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1575043694:38336..38519TCONS_00025666-exon-sc0000542-1575043694:38336..38519Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1491911889:39408..39629TCONS_00025666-exon-sc0000542-1491911889:39408..39629Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1510915933:39408..39629TCONS_00025666-exon-sc0000542-1510915933:39408..39629Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1575043694:39408..39629TCONS_00025666-exon-sc0000542-1575043694:39408..39629Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1491911889:40192..40543TCONS_00025666-exon-sc0000542-1491911889:40192..40543Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1510915933:40192..40543TCONS_00025666-exon-sc0000542-1510915933:40192..40543Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1575043694:40192..40543TCONS_00025666-exon-sc0000542-1575043694:40192..40543Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1491911889:45483..45572TCONS_00025666-exon-sc0000542-1491911889:45483..45572Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1510915933:45483..45572TCONS_00025666-exon-sc0000542-1510915933:45483..45572Clytia hemisphaericaexon
TCONS_00025666-exon-sc0000542-1575043694:45483..45572TCONS_00025666-exon-sc0000542-1575043694:45483..45572Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000542supercontigsc0000542:38336..45572 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
59.3959 55.495 57.6034 57.1968 17.1158 13.0649 17.1314 17.0406 17.9013 13.4867 12.375 11.9535 10.8388 8.34189 14.3786 18.496 16.899 17.8359 5.20393 6.98518 12.0768 12.6662 26.3548 21.302 12.0412 14.843 8.80477 7.87827 10.6205 11.4896
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008493DUF775
Blast
BLAST of TCONS_00025666 vs. Swiss-Prot (Human)
Match: HIKES (Protein Hikeshi OS=Homo sapiens GN=HIKESHI PE=1 SV=2)

HSP 1 Score: 196.823 bits (499), Expect = 1.372e-61
Identity = 94/198 (47.47%), Postives = 132/198 (66.67%), Query Frame = 2
Query:  155 MFGCVIPGRMPLFDAQQVSENQVVFQLPQCNSINHVVLFMTGSQPIPQGFAAAVYLCWPKPQ--PAWYLLGFLGNEKPSVIFKIAKPKQGTEQANLSSGWQTNLSSDSDIAQIGIAIEPVSELTQKTPLENTQATSLSTFVQFTQKMASNLFNYCSSFAVTQSEMTPQPTETFIPLNTIQKWYQTFERRMSRDPNFWK 742
            MFGC++ GR+    AQQV+E++ VF LP   SINHVV+FM G+ P P+G   +VY  +P     P W LLGF+ N KPS IFKI+  K G E +    G   N+     +AQIGI++E +  + Q+TP+ N   +S+ +F QFTQKM  N +N+ SSFAV+Q++MTP P+E FIP N + KWY+ F+RR++++P FWK
Sbjct:    1 MFGCLVAGRLVQTAAQQVAEDKFVFDLPDYESINHVVVFMLGTIPFPEGMGGSVYFSYPDSNGMPVWQLLGFVTNGKPSAIFKISGLKSG-EGSQHPFG-AMNIVRTPSVAQIGISVELLDSMAQQTPVGNAAVSSVDSFTQFTQKMLDNFYNFASSFAVSQAQMTPSPSEMFIPANVVLKWYENFQRRLAQNPLFWK 196          
The following BLAST results are available for this feature:
BLAST of TCONS_00025666 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HIKES1.372e-6147.47Protein Hikeshi OS=Homo sapiens GN=HIKESHI PE=1 SV... [more]
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