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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025654 ID=TCONS_00025654|Name=TCONS_00025654|organism=Clytia hemisphaerica|type=transcript|length=915bp
CGGTTAAAGGTTTGAGCAGCTGAGACAAATTTGAGATATTTGTAGAATCG
CTTGTTTTCTGAAATGTGTGGCGTTTTACTACGGAGATAATAAAAGCATT
TTTTCGGAGATAACGATGTTTATCATGAATAGATGAAAAACATGCTGTGG
CGCCCTGCTAGGGAGATAAATGTTAAGTAAATGAAAAAACTTATTATTTA
CCAGCTTCTGAttcaaaccacaagtgattaaacAACTCAAAATATACTAT
ACTAGCTCATCATTTCCACAGATTTCGTCAGGCATCTtacacatgttttt
ttataagcatacaaaaatccgaaaacaggctcagagatgcttaggttcaa
agcttaaggctgaaaaatgcttgagtgGATGCTAAAATCTAAAANGCTAA
TGTGATAGACTCtcctaattcgaacctctataactcgattgCCTTCTTAA
CTTGATTTCTCGTCtcttaacaatgccttataaacctagactcgaaattt
caatttcaaattcaaatcgaGTTCAGACTTTTCGTtatattttctgagga
aaatatagaaaagtctGAACGAGGAAAATATATAGCACATATTATACGAG
TGAAAATGGTAGTTTTTCTCTCTAAGAAAGAAGTTTTCACGATTGTTTTT
GGCTGTCGATTTTCAGAAAAGTGCGCTTTTTTGCTTctgaaaatacattt
atttgGTAGATCAAAAAATTTATAACGCATCCTCAAACAATATTTTTGTA
TTTACGCTCTCACTATTCATAAAGACATTTTTTGCGTTTATTTTTTAGTT
TATAACCTCCATATACTATTTTATAACAAAAAGttagaaataaaaattga
taatcaaaacattttgaattttgtttctcTACTATGAATTGCGTGCTCTT
TTCTCTCGAGGGTGC Run BLAST on NCBI transcript from alignment at sc0000541:188285..189199 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025654 ID=TCONS_00025654|Name=TCONS_00025654|organism=Clytia hemisphaerica|type=transcript|length=915bp|location=Sequence derived from alignment at sc0000541:188285..189199 (Clytia hemisphaerica)
GCACCCTCGAGAGAAAAGAGCACGCAATTCATAGTAgagaaacaaaattc
aaaatgttttgattatcaatttttatttctaaCTTTTTGTTATAAAATAG
TATATGGAGGTTATAAACTAAAAAATAAACGCAAAAAATGTCTTTATGAA
TAGTGAGAGCGTAAATACAAAAATATTGTTTGAGGATGCGTTATAAATTT
TTTGATCTACcaaataaatgtattttcagAAGCAAAAAAGCGCACTTTTC
TGAAAATCGACAGCCAAAAACAATCGTGAAAACTTCTTTCTTAGAGAGAA
AAACTACCATTTTCACTCGTATAATATGTGCTATATATTTTCCTCGTTCa
gacttttctatattttcctcagaaaatataACGAAAAGTCTGAACtcgat
ttgaatttgaaattgaaatttcgagtctaggtttataaggcattgttaag
aGACGAGAAATCAAGTTAAGAAGGcaatcgagttatagaggttcgaatta
ggaGAGTCTATCACATTAGCNTTTTAGATTTTAGCATCcactcaagcatt
tttcagccttaagctttgaacctaagcatctctgagcctgttttcggatt
tttgtatgcttataaaaaaacatgtgtaAGATGCCTGACGAAATCTGTGG
AAATGATGAGCTAGTATAGTATATTTTGAGTTgtttaatcacttgtggtt
tgaaTCAGAAGCTGGTAAATAATAAGTTTTTTCATTTACTTAACATTTAT
CTCCCTAGCAGGGCGCCACAGCATGTTTTTCATCTATTCATGATAAACAT
CGTTATCTCCGAAAAAATGCTTTTATTATCTCCGTAGTAAAACGCCACAC
ATTTCAGAAAACAAGCGATTCTACAAATATCTCAAATTTGTCTCAGCTGC
TCAAACCTTTAACCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025654-exon-sc0000541-1491911889:188285..189199 | TCONS_00025654-exon-sc0000541-1491911889:188285..189199 | Clytia hemisphaerica | exon |
| TCONS_00025654-exon-sc0000541-1510915933:188285..189199 | TCONS_00025654-exon-sc0000541-1510915933:188285..189199 | Clytia hemisphaerica | exon |
| TCONS_00025654-exon-sc0000541-1575043694:188285..189199 | TCONS_00025654-exon-sc0000541-1575043694:188285..189199 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000541 | supercontig | sc0000541:188285..189199 . |
Blast
The following BLAST results are available for this feature:
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