TCONS_00025647 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025647
Unique NameTCONS_00025647
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3883

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025647 ID=TCONS_00025647|Name=TCONS_00025647|organism=Clytia hemisphaerica|type=transcript|length=3883bp
acaagatCTGTTAAACAGATCAAATATGtttaacagaaaaaaatctACAT
AGTAACAAGTGTTTTACTACGGATTCTTAATTTTAAATGATTCTCTGATT
TTTTTAGAGAAAAGTAGAAAATACAAAGAAGAAGGAGAAAATAAGTTATT
TAATGAGGTGAATGACTATTAGAGATACCACTCTCActttatttaattta
ttaaaACACACACAGCACAAGGCATTTAAGGAAAGGTATGTCGTACCATC
AATTACGTTCTGACGATCCAGATAACATGAGCGAGATGACAGAACAGACT
TCCTTTATAAATCCAGCTGATGCTATTGCAAACCAACTCTCCAAAAATAT
TGCACTGGACATAGGATCCAAATGGAAAGATTATAACTCGAATAGGAGAA
TCGAGAAACACAAAGTAGACAGTCATCGAAAGGGACCAGCTCCCATTGAG
GAAGCAGATGGCATGAAAAAAGGAGTCACCAAGGCCACATATGGTACTCT
TGATTCAGATGTAGAGGAACTCGAATTTGATGACATTGATACTCGACAAA
ATGCAGCATCAGACTCTAATCCATACAATAAAGTCAAACCTAAAACGAAT
GCTAAGGGTGACTCCTTAGCCAGTTGTCGAGCAttgattgtttatttttc
aaaactagCCAAGAGTCGAGATGATGATGAGACTATAGATATGAATTTTG
TTGATTCGTTACTACAAAATGGTGCTGATATCAATTTCTCTGATAAACAC
GGCCAAACAGTAATGCATGAGATTTCAAGGGCGTGGCACCCTGATGTCGC
CAAATTTGCAATCCAGCACGGTGCAgatgtaaacaaagcagataAACACG
GCAGGTCAGCTTTACATTTAGCGGCTGCCGTTGATTATGATGATATGATT
GAGTTTTTGGTACACAATGGAGCCAACCTTGGTGCGAAAACGGTCGGTGA
AAACCAAACTCCGATGCACTATGCAGCCAAGAACAATGCAGCAGCATCCT
TGAAAATGATGTTAAGGCTCGGTGCACATATCAATGACCGTGATTACAAG
AAGAGAACACCACTTTTTGTAGCTGCCGAAACAGCTCGAGCTGAGGCAGC
ACGTTTTCTGATTGAGCAAGGCGCACCGGCTGGTGTTTACGATTCGAGTG
GAACATCATGTTTGGCTCTCATGATCGAGAAAATGCCGCACGTTGCCATT
GAGGCGGCCGAACAGTTCCATTTGCTCGACCGCGCGTTCAGGAAGCATTA
TTACTACCTATCTTACATAGAACCAGATCCTCTCTTTCTTTTACCGCCTA
TACCGACCAGTAAACGTGAGCGGCGTGAACAAAAGGAGAACCAAAAGGAG
GAGAAACGTTTGATGAAAGAGCAAGGAAAGAAAGCGAAGAAACGGGAAAA
GACATACGCTAAAACACCACTAGAAGTCATCGTGCAATTCAACCAGTTGG
ATATGGTGATGCATCCAGTCTTCCAACGTCTACTTCACGTCAAGTGGGGT
TTGTTCGGAAAATTCGGCTCTCTCATCAATGTCTCTATCAATTTGGTTTA
CACGCTTATTTGGACTTTCCTTGGTATCTTTTTGCCCAAAGATCATGTAT
ACTACACTCCAATGTCATCAATGTGGTGGCGATTGGTGCTTGAATTGATT
GCTGTTAGTTTGACTTGCTATTTTATTTACATGGAAATATCTCAATTACG
AATCACGGAGAAAGTGCACAATCGCTGGCGTCAATGGCGGACACGCCATG
TCGAGAAAGATCTTCAGTATTGCCACGAGCGTTGGCCGGAGGAGAAAAAG
TACCTGGAATCAGAGCTAGCCCAGATCCGGACCTTCCAGCGGACTTATTT
CCGTGAGCCgtggaatatttttgaatggATTGCGTACTTCGTTGTTCTTA
CCCTGGTTCTAACGCGTATCCTTGCCGTCGCGATGAACGACCGCGTGGCC
GAATCCATTCACCCGAGGATTTATTCGCTAGGCTTGATTGTTATTTGGTT
GAGATTCATGAGAGCGTGTCGTGCGTTCAGAAGTTTGGGTCCTTTCATCT
GTATCTTAGGCTCTGTTATTGAAGATACGATGAAGTTTGCATTCCTGTTC
TTTGAATTCTTCATTCCGTACACTGTTGGGTTCTGGATCATTTTTGGTGG
ACCAGAGAACCCGGGCACCGATTGGACTGAATTCAATGATCTCATCTATT
CTGTCTGGGGTATGACGTTGATGGGTGACTTTGATTGGGAAGGTTTGATC
AAAAAAGACCGCTTGATGGCTCAAATTCTTTGCGGAACGTATTTCGCTCT
TGCTGGTGTGGTCTGTATGAATCTCTACATTGCTTTGTTGTCAGATACGT
TTGCACGTGTGTACGCTCAAGCGCAAGCCAACGCCGTCATGCAACAAGCC
AAAACTGTTATCTTGTTAGAAGGGAAACTTGAAAAAgagaagaaattgaa
attcgGACATTACTTACAAGATGAATGCTCTCCTGAGGAAGTGTACTCAC
GTGACGAAGGGAATTCCCCTGATGATCACGATAATGACATGTTTGAAAAA
GTCACACGTCAAATCACCAACCGTATCGATGAACTTGAAGATAACATGAA
ACGCAGTGGACAAATGCTCTCTGATGGACGTCATGGTGGACCCGGTGGCG
GCGGTGGAGGACCTGGAGGACCTGGCAGCCCTGGAGCTGATGGAGGTGTC
TCGTCACTTGTCAATCACCAAACAGGTCAGATTGATGACGTCAAGTACGA
GTTGAGTGAACTGAAAAATCTGATGCACAAAATGATGTCTTTGCCGCCAC
CTTCCAACAAGGAGCCCTCTGAAATCCCTCCCAAGGGTCTTGTCGTCTCT
CTTGATCCAATCTACCCCCCTGCCCATCCGTTACCGGGGTATCAGCAACA
ACCACCACCAAACCCCTACCCACCACAGACGAACAACCCCTATCCCCCAC
CACCATCCATGGGGTACATGCCTCCACCCAACTACGCAACAGACGCAGAA
GCAGATCGTGGCAAGGGACCACGACGACGCGGCCGACGTGGTAAAAAAGG
TCCAGGTAGCGGTTACGATAGTGACAGCAATAGCTTCTATTCGGAACAAG
TTCCAGTGCAACATCATCAACGCCCACCGCCCCACCACCAACAACAGCAG
AGACGCCCTAGGAGTCCATCTTCAGTACAATCAGCACCTATCAGCAAGAA
gaacagaagaaagaagaagaatctTGGTGGAAGCTGGGAAGATATCCGAG
CTGATATCAATACTTAGATCATACAATTTCGATTTGCAGAAGCGATCGAT
CCTTATGTGAAAGTTACTTACTAAATTTAAAATACTACCGTCAATTGTTT
CAAGGCTGTTGCAGGCTGCACCGATCTTCAAATGGTCAagtcattttgaa
taattttcataTAAACTATTTAGTTGTTGGATCTAACGAGAAGAGTTGAT
TCTCCACCAACACCTTGCTACACAGCTTTTCACTTTCACTTCTTAACCTT
CAAACATTCGAAACAATGTGCCCTACTCAATATCTATTGTTAACCGCTAT
CTGCTCTCTGCCAACATTAATTATTTTACTATGGTCTTAATAAAGTGGAG
GCTTTGTCGGATGTTCAAACTCAACCCTCAGTCACGTGACCCTTAACGCC
ATTTATAATTgggtatttttttgtttgagattaattattttttagGGTAT
TAGAATTAAcacattaaattattttaacttttttgtatgaaaaacgactc
attttacattttttaacaTACAGTATATTTAGGTAACATGATAAAATTGA
GAGACTTAAACACCCTCGCAAAAAGCCTATAAGAAACTTATGGATCTTTC
TCTAGGAATTATCGGTGTTTCACAGGCATGANN
Run BLAST on NCBI

transcript from alignment at sc0000541:189715..203708-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025647 ID=TCONS_00025647|Name=TCONS_00025647|organism=Clytia hemisphaerica|type=transcript|length=13994bp|location=Sequence derived from alignment at sc0000541:189715..203708- (Clytia hemisphaerica)
ACAAGATCTGTTAAACAGATCAAATATGTTTAACAGAAAAAAATCTACAT
AGTAACAAGTGTTTTACTACGGATTCTTAATTTTAAATGATTCTCTGATT
TTTTTAGAGAAAAGTAGAAAATACAAAGAAGAAGGAGAAAATAAGTTATT
TAATGAGGTGAATGACTATTAGAGATACCACTCTCACTTTATTTAATTTA
TTAAAACACACACAGTACAAGGCATTTAAGGAAAGGTATGTCGTACCATC
AATTACGTTCTGACGATCCAGATAACATGAGCGAGATGACAGAACAGACT
TCCTTTATNAGGGGTTGGAATAAGATTTCCTGGGTGGAAAATTTTTGAAA
AATTAATTATAGGGCCCCCTCAGCTATTAGGTACCCAAGAGTACGCCTTG
ACTGGCAATTTATGATAATTATATAAAAGATGAGTGAGATGCTGCTCTTG
AAAGTGTAGATTTATGACTCCCTCCCCCTTGTCCTTATAAAACATCTTGC
AGAATACCCAAATAAGAAGATTAAGCATGATATTGTTTTAGCTTTTTTAC
TGTCAGGAAGTCTTAGAAGGATCAGGAAGACTGCATTATTACACTGACTG
TAACAATCCCAAAAAGACTAATTTTTTTTCTCTTCCAGTTGATAAAGCAA
TCCCAAAACTGTTTCTTTATTTCATTATTGCACAAAGTTCTTTAACTGGA
TTGTCATAATAATAAAAATTGTTACAATTAAAAACATAAAACTGCTGAAA
CTGCTACATGATATAAAGAAATTGACAGCAGATGGCGTCTACTACAACCA
TTGTTATTCGAAAACATTCCATCATTCCATCATAATGTGAATTTACAATA
GTATTGAAAACATTTCACTTTTTCTTTTTAATGTAGTTTTTAAAAGTAGT
GTAGTAATCGTATAATAGTGTGATAGTAAGCTAGTTTTCCTTTTATTCCC
TGGAGTTCTGTATCCAAAAGGAAATTAGACGAGTAGTGAATTGACAATTA
GATTTTCCTTTGTGGAAAAGTTGATTTACATTTTTGTTGATTTTTTTGAT
AATCTCTATCACTGTTCCTTTTAATAACTGTTGCTAGGTATTAACCCTTG
ACCTCTGGACGTCAGGATTGATTTAAATGTCATGTTTGACTTATGAAAAG
CTTATAATGATTATAAGCTATATAAAAAAAACACAAGATCTGTTAAACAG
ATCAAATATGTTTAACAGAAAAAAATCTACATAGTAACAAGTGTTTTACT
ACGGATTCTTAATTTCGATTCTCTGATTTTTTAGAGAAAAGTAGAAAATA
CAAAGAAGAAGGAGAAAATAATTATTTAATGAGGTGAATGACTATTAGAG
ATACCACTCTCACTTTATTTAATTTATTAAAACACACACAGCACAAGGCA
TTTAAGGAAAGGTATGTCGTACCATCAATTACGTTCTGACGATCCAGATA
ACATGAGCGAGATGACAGAACAGACTTCCTTTATAAATCCAGCTGATGCT
ATTGCAAACCAACTCTCCAAAAATATTGCACTGGACATAGGATCCAAATG
GAAAGATTATAACTCGAATAGGAGAATCGAGAAACACAAAGTAGACAGTC
ATCGAAAGGGACCAGCTCCCATTGAGGAAGCAGATGGCATGAAAAAAGGA
GTCACCAAGGCCACATATGGTACTCTTGATTCAGATGTAGAGGAACTCGA
ATTTGATGACATTGATACTCGACAAAATGCAGCATCAGACTCTAATCCAT
ACAATAAAGTCAAACCTAAAACGAATGCTAAGGGTGACTCCTTAGCCAGT
TGTCGAGCATTGATTGTTTATTTTTCAAAACTAGCCAAGAGTCGAGATGA
TGATGAGACTATAGATATGAATTTTGTTGATTCGTTACTACAAAATGGTG
CTGATATCAATTTCTCTGATAAACACGGCCAAACAGTAATGCATGAGATT
TCAAGGGCGTGGCACCCTGATGTCGCCAAATTTGCAATCCAGCACGGTGC
AGATGTAAACAAAGCAGATAAACACGGCAGGTCAGCTTTACATTTAGCGG
CTGCCGTTGATTATGATGATATGATTGAGTTTTTGGTACACAATGGAGGT
GAGTTTTTGATCCGTTTGTTTGCTTTTTGTGATCTTTCCTTCATTTTTTG
ACATAAAATCTCAAATAGACCCCTGAGAGCATTTGCCTTTCTTTCACGAA
ATTTCACTGGACTTACCCTTTATGGAACAAGAGTTTGAAGACTGACGCTT
GAGAGCTCTAGGTTCTTCAAATGATTTTATTTTGGTTTTCTTTCTGATGA
TATTACTAAAAAATTATCTTTGCTTTTTTGTCTTTCTTTATTGCACACTT
CATTTTAAATGTCAGCTTAAGATAGCATAGTGTGTTTTCAGGTCATGAAT
AGTCTAGTGTTTTAAATGAAAGTATTACTACATCACTTTGCACAGATCAA
CATCTGTAAATAAGACCCTGTTTACATCATACAAAACAAGGAACTTTTTC
TTTCCTCCATCATTAAAAAGATAAGTAGTTAATTAGAGATCTTGATATAA
TGACTTGTAGGTTTTCATTTTGTATAAATTATTTGGGAGTGCTGGTTGCT
ATGGTAGCTAATTAATCCTAGACCGTCTATTTTAACTAACTTACAATATT
GCATAATATGTTTAGGTAGTTAACTTCTTTGCTTTGAACTATTTTCAGTA
GATTTTACTCATTAAAAAATCAGACCTTAAAAAACTTTCTAATGCGGACC
GAGCTAATTAAAAATCTTCAACATTCAGCTTTCCCCTAGCAGGCTAGCCC
CTAGAATAAAAAAAAATGGTCCCCCCTCCCCATTCTATGTGGTATTCCTG
ATTCTTTCTTCTTTATTCGTGTCAATATATCACGGAACAACATGGACTAT
ACCCCTTTTAGCTTCAAAACAAATTTATAAAAGAAAAACAGCATCCATTG
GCAACCCCTTTATTTTTCTTCACGATTATTTAATGACTAATCGTCTTTTT
CAATTCCAGCCAACCTTGGTGCGAAAACGGTCGGTGAAAACCAAACTCCG
ATGCACTATGCAGCCAAGAACAATGCAGCAGCATCCTTGAAAATGATGTT
AAGGCTCGGTGCACATATCAATGACCGTGATTACAAGAAGAGAACACCAC
TTTTTGTAGCTGCCGAAACAGGTAGGCCACTGTTCCTATTTGCAAATTTT
GTTGGATTCTTAAGTTTCTCAACAACCCTTCACGATTCTTCATTTAAGGA
TTACCGTAATTTTACTACTTACTGTTAAATCTTTCAACTGACTTATAAAC
CTTCGCTGGTATTAATAGATTTTTAAAAGAGTCGTAATAGTGCAGTGGTT
ACCAACCAATGGCTTACGTAAAAAGGTCACGCTTTGTTTACACTTGGTAC
TATAACTCACTTGACAAGTGATAGCATGTACCTTTTTTCGGGTCAAACTA
CATGACATAAATGCCAGGCTTTTTGTCGACACTTATATGGTTTTCGCCTT
TGCTAGGAAAACAGCGTTTCTTTCCATATTCCGAAAAGATTTTCATCAAT
TATGGTGAAGAAACACAAACGTCTTTTAAACGCTGTATTTGTAATGACGT
GAACAGATTTTGCAACAAGGACGCCGAAAATGATTTCTTTCGATTTTTTC
ATCATGTAACACTTGAACATTTCTTTTTACCTTAGCTCGAGCTGAGGCAG
CACGTTTTCTGATTGAGCAAGGCGCACCGGCTGGTGTTTACGATTCGAGT
GGAACATCATGTTTGGCTCTCATGATCGAGAAAATGCCGCACGTTGCCAT
TGAGGCGGCCGAACAGTTCCATTTGCTCGACCGCGCGTTCAGGAAGCATT
ATTACTACCTATCTTACATAGAACCAGATCCTCTCTTTCTTTTACCGCCT
ATACCGACCAGTAAACGTGAGCGGCGTGAACAAAAGGAGAACCAAAAGGA
GGAGAAACGTTTGATGAAAGAGCAAGGAAAGAAAGCGAAGAAACGGGAAA
AGACATACGCTAAAACACCACTAGAAGTAAGCATGGAGGATAGATTTTTT
TTNGAAAGCGAAGAAACGGGAAAAGACATACGCTAAAACACCACTAGAAG
TAAGCATGGAGGATAGATTTGTTTTGCTTTGATTAGTAACAGAAGGGATA
ATCAGATGGTTTGATATCTTGAGATTCTTTCTCTTTTCTTGAGAAAAATA
TCTGAATCTTTTTTCAGATTATCTTTCAAAGTTGAAATATTCATGACTTT
TTGTAATTACAACGTAAAAACCATGCGTAAGACCCTTTTACGGTAACTTT
TAATAACTATTCATCTCAAGTTTGGAAAATATTTAAAGGCCGGTCCATTC
AGAGGATTTACTCATCGCAGGGTTCAGACAGACCCTGGAAAACCTGGAAA
ACCTGGAAATAATATGATAAATTTTCAGAAAAATCAGGGAAACTCAGGGA
AACCCAGGGAAAAAAAAAAAATTTCCCAGTCTGCTCAGGGAAACTCAGGG
AATTTTATTTTTTGAAGAATGAATTTAAAATTTTTAAAGTTTTTTCTTAG
ATTCATTTAGATTTTTGCTAACAACAAAACTTACTAGTTTTAAAAGATAC
TAATTTAAGTAGATTGTTGGCAGAGATATATTTTTTGTCTTGAAAATATG
CTGGAATGTGTTCGTCTTCAATTTTAGTGTTGTGTTTGCAGTAGTTTATT
CAATTTATCTAGATGATAGGTGCTAATCAAGTAGATTGTTGTTTTGACAG
AGAGAAAGACACTTACTATAATAAGGTTTTATTTTTTTTAGAAATAAGTA
AAAATGAGTAAGCAAGAAAAAACATATTTTCAAGATAATTGGTCAGAAAT
AGACGAGTTTAAAGATTGGATTGCTCGATCATCAGTTNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNAAATATGGGAGTTCAGGCACTTAGAAGTCACGC
ATCTGGAAAGAAACATAAAGAGATAACACAGAAAGTGTCTTCCTTTTTTA
AAACGAAACCAGTTAAAGAGTCGTCACATGAGCAGAAATCAAAAGAGGAT
AACGAAAGGACAAAAAAGGCTCAAACAAGTATAGAATTGACTCTTACTTC
TGCAGATGTTACCAAAGCGGAGATTCGGTGGGCTCTAGATGGTATTCTGA
AGGGAAACTCGAACAATCAAAACGCTAACATCAGTCCCCTCCTTAATGCA
TGTTTTCCTGGTCATGAAACGATCAAGTTATTTTCACTAGGAGCTGATAA
GTTACGATACTCTTGCAATTATGGTTTAGCTCCATATTTTCGTTCCATTC
TTCAAGACGAAGTTAAAAAATCTGAAATCTATGTCATGTCTTTCGATGAA
AGTCTTAATGATGTAAATCAGAAATGCCAAATGGGTCTAATTGTTCGATA
TTGGGATGAGAAAACTCAACAAGTCACAGTAAGGTATTGGGATTGTTCTT
ATCTTGGACAATCAACACACGCTGATCTTCTGGAGCATTTTAGCAAGACT
ACTGAGCCTTTAGACCCATCTAAGATGGTTCAAGTTTCAAAGGATGGACC
AAATGTCAATCTAAAGTTTCTGAAAACGTTAATTTCTTCTCGTGAAGAGA
TAAAGCTTCCATCTCTTGTTGACATCGGAACTTGTCCATTATGTACATAC
AGTCAATAATTCTTTTCAAGTTGGGGCTAAGAATGCAGAGTGGGACTTAA
AAAAACACTAAAGGGGATCTGGCAAATCTTTCACGATTCTCCTGCACGTC
GCGAGGATTACGAAAAAGAAACAGGGAGCACAGTTTACCCAAAAGCTTTC
TGAAAATTACATACGCATATTTGGTATTGATTTTTCCGTCAGTTCATTTC
TTCAAAACTTAAACTTGAGTCCAATTTTATAAAAAATGAACTACCGATGG
ATTCACAAGTGGTTCTTATTCAGGTCTAGAAAGCCTAGGTATATACCAAA
ATATTTTTTATATTCTTTTTTAGTTTTGTTTTCAAGACAGTGTAAAATTT
TCAAGGTCTAGGGTTTAAATACCTTAAATATGAACGTTTTGGGACTTCAA
AGTCCACCATTTTCAACATTTTACTGCATAAAATTTGAAAAATTTTGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGGAAAAAATAGCTAAAATGAGGAAT
TTCTCAGGGAAAAAACCTTTGAAAATTGATTAAAATTCAGGGAAACTCAG
GGAATTTTATTTTCGAAGGTCTGTCTGAACCCTGTCATGAATGCAGAAGG
TTTCTGAGTCAAAAAATCTCCAACGACCTGATTGTATCTAAGCTTTTAAG
ACCGGTCTCCACTTTCGCGCGAAATGGGATACAGTTTTTTCTTAGCCTTT
TTTGCCTGAAGAAAAGATTACGTCATAAAAAAGTTTCGCGCGAACAAAAA
GGAAGGAGTCCATTTGTTTCTTACCTCAAAAATTCCATTTTGCCATCTTT
TCCCCAAATGCCACCATCGTGTGAAACAAATGGAAACCGTGTTAAAAATG
CAAAAGTCTACCATCTTGCAAACTCTTAGTTACGTCAATAATGGCCGCAT
AAATTATGTCAGAAATGTAAACAAACAAACAAGAAAACGAAAGTGAAATG
CATCTTAATTATGCAATTCCATATTGTCGCCATTTACAATAACATTCTTC
CACCGTTTACCCAGAATGTAGAAACAAATGCGAATTTCTTTTTGCTTGGA
AAAGCTTGGCAAACTTTCACTTTTGACACAAATGATCAATGTAAATTGAG
GTGGTAAAAATGTAACTATTTTTTAACACTTTTGAACACACTTCGATGAA
ACAAATGGGAAAAAGGTGGCATAAGTGACATAAATGGTGCTGAAACAAAT
GGACCCAAGTTTTACGTACTTTTTTTTAATCCGTTACGTCAATTTTGACC
AATGGAATTGCTTCATTTTCAACCGACCAATGACCTTACAAAATGTCAAA
AAGTTTTCGCTCATGTCGCGCGAAAATGGAGACCGACCTTTAGCATCACT
CTTACGAAATCAAAAAAATCGATCACCGTAAGAAAGAAAGGGGCCAGATA
ATAGAAGTCCATATGAGAAAATAAACTTTATTAATAACTTCTGGGATCAT
TTCAACAGGTCATCGTGCAATTCAACCAGTTGGATATGGTGATGCATCCA
GTCTTCCAACGTCTACTTCACGTCAAGTGGGGTTTGTTCGGAAAATTCGG
CTCTCTCATCAATGTCTCTATCAATTTGGTTTACACGCTTATTTGGACTT
TCCTTGGTATCTTTTTGCCCAAAGATCATGTGTAAGTTTGATTCAATTTT
TAACACTGAAAATTGTAAATTGGTTTGGTATTTATAACTGTCAATTAGAA
AATGTTCTACCGTTTCCTAATAGAAGTATTACAAATGTTTAGCGAACAAG
ATGTTTTGACATTTTCGTTGCCGTTCTTGTAGATACTACACTCCAATGTC
ATCAATGTGGTGGCGATTGGTGCTTGAATTGATTGCTGTTAGTTTGACTT
GCTATTTTATTTACATGGTGAGTATAAAAGTCCGTTATACTGGGTTCATT
TTCTTACCCTATTTTATGCATGACCAGTTGGGATGAATTAGAGAAATGTT
AGATTTGTCTGAATATACCCATTTCACCTTCATAAAACATATTCGTTATA
TTGGTCAATATGTATTGTATATGCCGTAAAAAGTACCCGAAAAACTACTA
GGTTCATGACTATTTGTAAATTTTAAAGCAATAAAACTAATGATAAATTT
GATGTGTAAAAGATTACATCATGAATACCATGAACTCGAGTGAATTCATG
GTGTAAATGGTGAAAATCTCTTTATGACTTTTAGGAAATATCTCAATTAC
GAATCACGGAGAAAGTGCACAATCGCTGGCGTCAATGGCGGACACGCCAT
GTCGAGAAAGATCTTCAGTATTGCCACGAGCGTTGGCCGGAGGAGAAAAA
GTACCTGGAATCAGAGCTAGCCCAGATCCGGACCTTCCAGCGGACTTATT
TCCGTGAGCCGTGGAATATTTTTGAATGGATTGCGTACTTCGTTGTTCTT
ACCCTGGTTCTAACGCGTATCCTTGCCGTCGCGATGAACGACCGCGTGGC
CGAATCCATTCACCCGAGGATTTATTCGCTAGGCTTGATTGTTATTTGGT
TGAGATTCATGAGAGCGTGTCGTGCGTTCAGAAGTTTGGGTCCTTTCATC
TGTATCTTAGGTACGCCAAATTAGTTCAAAATATTCTTCTTTGACTGACA
CACGGGAGGTTTTTTTTTAGATAAAAAATCATCCATGGCCAGTGTGGCAA
GCCGACCTACTTTTCCCCGTTACGGTAACCTACCCTATGTCTCCTTTTCA
GGTTCTTCAATCTTAGTTTAATTATAAAATAATTTATACCTTAGACTGTC
AACTTTTGAAAGGGGCTCCTTTTGACATGACATGATGTAAAGGGTTATTG
AGATTCGTTCTATGGAGAGTCCCCATATTGGAAGAGATGGTATGAACTGA
AATATCTGAACAAGAAATCTGAAGAAGCTGTTTTATACCCTTAGTTTTTC
CTCTTTTCTCAGGCTCTGTTATTGAAGATACGATGAAGTTTGCATTCCTG
TTCTTTGAATTCTTCATTCCGTACACTGTTGGGTTCTGGATCATTTTTGG
TGGACCAGAGAACCCGGGCACCGATTGGACTGAATTCAATGATCTCATCT
ATTCTGTCTGGGGTGTAAGTATCTGAATGATCTTATTCTTTGGTGGGGAT
TTAAACAAGTTATTTACTTTTTGTCAGGAATTCTTTGTTGGTACAATTTT
AGCCTCGCTCTTTATTGGTTAGACAATTTTATAACTTTAAGAGGTTTTGA
TTGAGTACACCTAAGTCAGCCATACTTTCAAGGAAGNGGTTAGACAATTA
TTTTTATAACTTTTATAACGAGGTTTTGGTTGAGTACACCTAAGTCAGCA
GAAGTCAGCCATACTTTCAAGGAAGAGCTGCAGCGTAACTACGACGTTTT
TTTGTGAAAGTGATTTTTTTCTGAAGTAAATAATAGTACTGTTTAAGAAT
TGAGAAGATAGTAGACAAAAAGAACCAATAATTAAAGCAGTAAATCTTAT
CATAATCAATGGAAGCAAGCAGATTTTTTGCTAGAGATAAAGTTTACAGG
AACAATGGAAGAGAGAAGTTAACAGAGTGATATAGAATGACCAGGTTTGT
CAGCAGCATTATGACTTTTTTTTTTATATTTCATAAAGTTTTTGCTATTG
AGACATTCAAAATTACAAATTATTAAATTAGTCTAGCATCAATCGACAAA
GACTTTTATTAGTATTCATTTCAAAAGCTTTAAGTTTTCAGCATCTCTTC
ACATTTCAGATGACGTTGATGGGTGACTTTGATTGGGAAGGTTTGATCAA
AAAAGACCGCTTGATGGCTCAAATTCTTTGCGGAACGTATTTCGCTCTTG
CTGGTGTGGTCTGTATGAATCTCTACATTGCTTTGTTGTCAGGTAAGCCA
GGAAAAAAATACACGTATTTTACAAGCATAAACTTCTTCAAGAAGATTTA
AGAAAGGTAGAAATAATCATTTTGACAGTATGAAGTATCATCTGCAGTAT
TTTTCGCCCCATTTTCTAGCACCCTTTAAAGGTGTCATCATGTTTGGCTT
AGAGTTATTAAGTAGAAAATCCTAAAAAAGAGACATTTCCTTAATGCCCC
ATCCGAACAAAATATCTTTTCATTCGAATGGCATCCAAGATTCTTCACAA
AACTCTTTCCAAGAACTTGTGCAACTGCAGAGACAAAACATCTGAAGATT
TAACTCAGAGTTAAAAAAAACTAACGTATCGTATTACTTCGAGTAAACGT
CCCCTTCTTTAAACGCCTAATAACCTAATAACCAAAAGAATTGATGAACA
CCCGGGGTGTTTATTCAAAGTAAATACTGTATTCTTATTATGTGTGTTTG
CACTGCAAAATAGAGAGTTACAAATTAGACTTAAAAAAAAAACAAAGAAA
TTACCAACTTGATAAGAATTTATTTTCATTTACGTTAGATACGTTTGCAC
GTGTGTACGCTCAAGCGCAAGCCAACGCCGTCATGCAACAAGCCAAAACT
GTTATCTTGTTAGAAGGGAAACTTGAAAAAGAGAAGAAATTGAAATTCGG
ACATTACTTACAAGATGAATGCTCTCCTGAGGTATGTTGAACGTCTTTTT
TAGTGGTTCTTATCGGCGATCCAAAAAAATATCTGCAATCTGAAGAGTAC
AATATATCTTGTATTTTACATGTAAAAATATAAATTGATGAAAAGATGTT
GTTGCATTGTAGTGGTAGAAGCAATCTAACGTCACTTTGCTACAAAAGTG
TCCTCCAACACAAAAAGTGCATTTTTTGGGTCACCGATAAACCAGTTATC
AGAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTGCTCGTACAATATGGAAATATTTCACTC
GTTCCGGATTTTCCGTATATTTTCCTCGCCTAAAGGCTCGGAAAATATTG
TACGGAAAAATCTCCGAACTCGTAAAATATTTCTCATATTGTACTCACAA
CTGTCCGATAACTATTACATGTTAATTAAAATATATTTCATAATTATACA
TTTTTCAACTCAACTCATTTATATTTCTGATATTTTTCAGACGACCGACA
TCTGACAAATACAAATAGGTCGAGCCTTCATTTTTTTCCGTGGCAAATAG
GTCGAACCCTTAAAAAATACCAACGACATTTAAAGGGTTAATATCCATGT
CAACCCTTCACAGATAAATACATTTTGCCCTTGTTGAACTTGAGCCAAAT
CTTTTAATGTTTTAAAGGTTCAATATGGTTTTATATGCTTGATCTTTTCC
ATTGCCAAGTACTGCCTTAGGCTAGGTAGATTGTCCAGAGGTTTTGAAGG
GATTTAGAGTTATTCGGTAAAACTACCAATTTGATCTAGAACATTTGGGA
CTATTTAAACCCCTTTTGAGACTTTTATTTGAAGAAATAGCCATCTTTAT
AAAGAAAGCGTATTTAGAACATCTTAAGAACAAGCTACTATACTTTTTCT
TCTCTTGCAGGAAGTGTACTCACGTGACGAAGGGAATTCCCCTGATGATC
ACGATAATGACATGTTTGAAAAAGTCACACGTCAAATCACCAACCGTATC
GATGAACTTGAAGATAACATGAAACGCAGTGGACAAATGCTCTCTGATGG
ACGTCATGGTGGACCCGGTGGCGGCGGTGGAGGACCTGGAGGACCTGGCA
GCCCTGGAGCTGATGGAGGTGTCTCGTCACTTGTCAATCACCAAACAGGT
AGGGACGTTTTCACATGTTGACAAGAAAAGCGGAAAACTCGTTTTAGAGT
TACTTTGTTGAGTTAGTAGATCTTGTTAATTAGCGTCTTTGCGTTAATGC
AACATTTTGTCTTTTGCCAGTCAGCAAATATTTTCAGAAATTTTCTTTTT
TTTATACAGTAGACTCTCACTAATTCGAAATATTTTTATCGAATCTTTAC
ATGATTTGTACTCATTTTTAGTCTCCGTCAAGAAGAAATTAAATTTTCTT
ATCGAGTTCTAACTAGTGTGGCGTATAAGTTGGATGAAAAGAATACCTTT
TCAAAATTTACCATCTTTTTCCACCCATCAAAACAGGTCAGATTGATGAC
GTCAAGTACGAGTTGAGTGAACTGAAAAATCTGATGCACAAAATGATGTC
TTTGCCGCCACCTTCCAACAAGGAGCCCTCTGAAATCCCTCCCAAGGGTC
TTGTCGTCTCTCTTGATCCAATCTACCCCCCTGCCCATCCGTTACCGGGG
TATCAGCAACAACCACCACCAAACCCCTACCCACCACAGACGAACAACCC
CTATCCCCCACCACCATCCATGGGGTACATGCCTCCACCCAACTACGCAA
CAGACGCAGAAGCAGATCGTGGCAAGGGACCACGACGACGCGGCCGACGT
GGTAAAAAAGGTCCAGGTAGCGGTTACGATAGTGACAGCAATAGCTTCTA
TTCGGAACAAGTTCCAGTGCAACATCATCAACGCCCACCGCCCCACCACC
AACAACAGCAGAGACGCCCTAGGAGTCCATCTTCAGTACAATCAGCACCT
ATCAGCAAGAAGAACAGAAGAAAGAAGAAGAATCTTGGTGGAAGCTGGGA
AGATATCCGAGCTGATATCAATACTTAGATCATACAATTTCGATTTGCAG
AAGCGATCGATCCTTATGTGAAAGTTACTTACTAAATTTAAAATACTACC
GTCAATTGTTTCAAGGCTGTTGCAGGCTGCACCGATCTTCAAATGGTCAA
GTCATTTTGAATAATTTTCATATAAACTATTTAGTTGTTGGATCTAACGA
GAAGAGTTGATTCTCCACCAACACCTTGCTACACAGCTTTTCACTTTCAC
TTCTTAACCTTCAAACATTCGAAACAATGTGCCCTACTCAATATCTATTG
TTAACCGCTATCTGCTCTCTGCCAACATTAATTATTTTACTATGGTCTTA
ATAAAGTGGAGGCTTTGTCGGATGTTCAAACTCAACCCTCAGTCACGTGA
CCCTTAACGCCATTTATAATTGGGTATTTTTTTGTTTGAGATTAATTATT
TTTTAGGGTATTAGAATTAACACATTAAATTATTTTAACTTTTTTGTATG
AAAAACGACTCATTTTACATTTTTTAACATACAGTATATTTAGGTAACAT
GATAAAATTGAGAGACTTAAACACCCTCGCAAAAAGCCTATAAGAAACTT
ATGGATCTTTCTCTAGGAATTATCGGTGTTTCACAGGCATGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014393XLOC_014393Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025647-exon-sc0000541-1575043694:203552..203708TCONS_00025647-exon-sc0000541-1575043694:203552..203708Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:201611..202375TCONS_00025647-exon-sc0000541-1575043694:201611..202375Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:200538..200699TCONS_00025647-exon-sc0000541-1575043694:200538..200699Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:199683..200023TCONS_00025647-exon-sc0000541-1575043694:199683..200023Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:195328..195500TCONS_00025647-exon-sc0000541-1575043694:195328..195500Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:195092..195176TCONS_00025647-exon-sc0000541-1575043694:195092..195176Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:194399..194774TCONS_00025647-exon-sc0000541-1575043694:194399..194774Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:193895..194046TCONS_00025647-exon-sc0000541-1575043694:193895..194046Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:193117..193249TCONS_00025647-exon-sc0000541-1575043694:193117..193249Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:192428..192570TCONS_00025647-exon-sc0000541-1575043694:192428..192570Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:191211..191448TCONS_00025647-exon-sc0000541-1575043694:191211..191448Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1575043694:189715..190872TCONS_00025647-exon-sc0000541-1575043694:189715..190872Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:203552..203708TCONS_00025647-exon-sc0000541-1510915933:203552..203708Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:201611..202375TCONS_00025647-exon-sc0000541-1510915933:201611..202375Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:200538..200699TCONS_00025647-exon-sc0000541-1510915933:200538..200699Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:199683..200023TCONS_00025647-exon-sc0000541-1510915933:199683..200023Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:195328..195500TCONS_00025647-exon-sc0000541-1510915933:195328..195500Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:195092..195176TCONS_00025647-exon-sc0000541-1510915933:195092..195176Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:194399..194774TCONS_00025647-exon-sc0000541-1510915933:194399..194774Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:193895..194046TCONS_00025647-exon-sc0000541-1510915933:193895..194046Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:193117..193249TCONS_00025647-exon-sc0000541-1510915933:193117..193249Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:192428..192570TCONS_00025647-exon-sc0000541-1510915933:192428..192570Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:191211..191448TCONS_00025647-exon-sc0000541-1510915933:191211..191448Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1510915933:189715..190872TCONS_00025647-exon-sc0000541-1510915933:189715..190872Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:203552..203708TCONS_00025647-exon-sc0000541-1491911889:203552..203708Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:201611..202375TCONS_00025647-exon-sc0000541-1491911889:201611..202375Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:200538..200699TCONS_00025647-exon-sc0000541-1491911889:200538..200699Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:199683..200023TCONS_00025647-exon-sc0000541-1491911889:199683..200023Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:195328..195500TCONS_00025647-exon-sc0000541-1491911889:195328..195500Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:195092..195176TCONS_00025647-exon-sc0000541-1491911889:195092..195176Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:194399..194774TCONS_00025647-exon-sc0000541-1491911889:194399..194774Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:193895..194046TCONS_00025647-exon-sc0000541-1491911889:193895..194046Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:193117..193249TCONS_00025647-exon-sc0000541-1491911889:193117..193249Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:192428..192570TCONS_00025647-exon-sc0000541-1491911889:192428..192570Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:191211..191448TCONS_00025647-exon-sc0000541-1491911889:191211..191448Clytia hemisphaericaexon
TCONS_00025647-exon-sc0000541-1491911889:189715..190872TCONS_00025647-exon-sc0000541-1491911889:189715..190872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000541supercontigsc0000541:189715..203708 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.537792	3.67337	6.69704	8.94031	45.3055	17.8002	32.9702	34.8884	5.34575	2.19956	2.17973	1.41212	1.41894	2.22772	0.305312	0.32047	0.00018214	7.15881e-05	0.000334322	0.00022992	0.519837	2.28324	0.616567	2.80214	4.36283	6.0682	2.94914	1.57395	2.3875	1.21726
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025647 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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