TCONS_00025646 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025646
Unique NameTCONS_00025646
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3850

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025646 ID=TCONS_00025646|Name=TCONS_00025646|organism=Clytia hemisphaerica|type=transcript|length=3850bp
TTTTAGAGAAAAGTAGAAAATACAAAGAAGAAGGAGAAAATAAGTTATTT
AATGAGGTGAATGACTATTAGAGATACCACTCTCActttatttaatttat
taaaACACACACAGTACAAGGCATTTAAGGAAAGGTATGTCATACCACTC
TCActttatttaatttattaaaACACACACAGCACAAGGCATTTAAGGAA
AGGTATGTCGTACCATCAATTACGTTCTGACGATCCAGATAACATGAGCG
AGATGACAGAACAGACTTCCTTTATAAATCCAGCTGATGCTATTGCAAAC
CAACTCTCCAAAAATATTGCACTGGACATAGGATCCAAATGGAAAGATTA
TAACTCGAATAGGAGAATCGAGAAACACAAAGTAGACAGTCATCGAAAGG
GACCAGCTCCCATTGAGGAAGCAGATGGCATGAAAAAAGGAGTCACCAAG
GCCACATATGGTACTCTTGATTCAGATGTAGAGGAACTCGAATTTGATGA
CATTGATACTCGACAAAATGCAGCATCAGACTCTAATCCATACAATAAAG
TCAAACCTAAAACGAATGCTAAGGGTGACTCCTTAGCCAGTTGTCGAGCA
ttgattgtttatttttcaaaactagCCAAGAGTCGAGATGATGATGAGAC
TATAGATATGAATTTTGTTGATTCGTTACTACAAAATGGTGCTGATATCA
ATTTCTCTGATAAACACGGCCAAACAGTAATGCATGAGATTTCAAGGGCG
TGGCACCCTGATGTCGCCAAATTTGCAATCCAGCACGGTGCAgatgtaaa
caaagcagataAACACGGCAGGTCAGCTTTACATTTAGCGGCTGCCGTTG
ATTATGATGATATGATTGAGTTTTTGGTACACAATGGAGCCAACCTTGGT
GCGAAAACGGTCGGTGAAAACCAAACTCCGATGCACTATGCAGCCAAGAA
CAATGCAGCAGCATCCTTGAAAATGATGTTAAGGCTCGGTGCACATATCA
ATGACCGTGATTACAAGAAGAGAACACCACTTTTTGTAGCTGCCGAAACA
GCTCGAGCTGAGGCAGCACGTTTTCTGATTGAGCAAGGCGCACCGGCTGG
TGTTTACGATTCGAGTGGAACATCATGTTTGGCTCTCATGATCGAGAAAA
TGCCGCACGTTGCCATTGAGGCGGCCGAACAGTTCCATTTGCTCGACCGC
GCGTTCAGGAAGCATTATTACTACCTATCTTACATAGAACCAGATCCTCT
CTTTCTTTTACCGCCTATACCGACCAGTAAACGTGAGCGGCGTGAACAAA
AGGAGAACCAAAAGGAGGAGAAACGTTTGATGAAAGAGCAAGGAAAGAAA
GCGAAGAAACGGGAAAAGACATACGCTAAAACACCACTAGAAGTCATCGT
GCAATTCAACCAGTTGGATATGGTGATGCATCCAGTCTTCCAACGTCTAC
TTCACGTCAAGTGGGGTTTGTTCGGAAAATTCGGCTCTCTCATCAATGTC
TCTATCAATTTGGTTTACACGCTTATTTGGACTTTCCTTGGTATCTTTTT
GCCCAAAGATCATGTATACTACACTCCAATGTCATCAATGTGGTGGCGAT
TGGTGCTTGAATTGATTGCTGTTAGTTTGACTTGCTATTTTATTTACATG
GAAATATCTCAATTACGAATCACGGAGAAAGTGCACAATCGCTGGCGTCA
ATGGCGGACACGCCATGTCGAGAAAGATCTTCAGTATTGCCACGAGCGTT
GGCCGGAGGAGAAAAAGTACCTGGAATCAGAGCTAGCCCAGATCCGGACC
TTCCAGCGGACTTATTTCCGTGAGCCgtggaatatttttgaatggATTGC
GTACTTCGTTGTTCTTACCCTGGTTCTAACGCGTATCCTTGCCGTCGCGA
TGAACGACCGCGTGGCCGAATCCATTCACCCGAGGATTTATTCGCTAGGC
TTGATTGTTATTTGGTTGAGATTCATGAGAGCGTGTCGTGCGTTCAGAAG
TTTGGGTCCTTTCATCTGTATCTTAGGCTCTGTTATTGAAGATACGATGA
AGTTTGCATTCCTGTTCTTTGAATTCTTCATTCCGTACACTGTTGGGTTC
TGGATCATTTTTGGTGGACCAGAGAACCCGGGCACCGATTGGACTGAATT
CAATGATCTCATCTATTCTGTCTGGGGTATGACGTTGATGGGTGACTTTG
ATTGGGAAGGTTTGATCAAAAAAGACCGCTTGATGGCTCAAATTCTTTGC
GGAACGTATTTCGCTCTTGCTGGTGTGGTCTGTATGAATCTCTACATTGC
TTTGTTGTCAGATACGTTTGCACGTGTGTACGCTCAAGCGCAAGCCAACG
CCGTCATGCAACAAGCCAAAACTGTTATCTTGTTAGAAGGGAAACTTGAA
AAAgagaagaaattgaaattcgGACATTACTTACAAGATGAATGCTCTCC
TGAGGAAGTGTACTCACGTGACGAAGGGAATTCCCCTGATGATCACGATA
ATGACATGTTTGAAAAAGTCACACGTCAAATCACCAACCGTATCGATGAA
CTTGAAGATAACATGAAACGCAGTGGACAAATGCTCTCTGATGGACGTCA
TGGTGGACCCGGTGGCGGCGGTGGAGGACCTGGAGGACCTGGCAGCCCTG
GAGCTGATGGAGGTGTCTCGTCACTTGTCAATCACCAAACAGGTCAGATT
GATGACGTCAAGTACGAGTTGAGTGAACTGAAAAATCTGATGCACAAAAT
GATGTCTTTGCCGCCACCTTCCAACAAGGAGCCCTCTGAAATCCCTCCCA
AGGGTCTTGTCGTCTCTCTTGATCCAATCTACCCCCCTGCCCATCCGTTA
CCGGGGTATCAGCAACAACCACCACCAAACCCCTACCCACCACAGACGAA
CAACCCCTATCCCCCACCACCATCCATGGGGTACATGCCTCCACCCAACT
ACGCAACAGACGCAGAAGCAGATCGTGGCAAGGGACCACGACGACGCGGC
CGACGTGGTAAAAAAGGTCCAGGTAGCGGTTACGATAGTGACAGCAATAG
CTTCTATTCGGAACAAGTTCCAGTGCAACATCATCAACGCCCACCGCCCC
ACCACCAACAACAGCAGAGACGCCCTAGGAGTCCATCTTCAGTACAATCA
GCACCTATCAGCAAGAAgaacagaagaaagaagaagaatctTGGTGGAAG
CTGGGAAGATATCCGAGCTGATATCAATACTTAGATCATACAATTTCGAT
TTGCAGAAGCGATCGATCCTTATGTGAAAGTTACTTACTAAATTTAAAAT
ACTACCGTCAATTGTTTCAAGGCTGTTGCAGGCTGCACCGATCTTCAAAT
GGTCAagtcattttgaataattttcataTAAACTATTTAGTTGTTGGATC
TAACGAGAAGAGTTGATTCTCCACCAACACCTTGCTACACAGCTTTTCAC
TTTCACTTCTTAACCTTCAAACATTCGAAACAATGTGCCCTACTCAATAT
CTATTGTTAACCGCTATCTGCTCTCTGCCAACATTAATTATTTTACTATG
GTCTTAATAAAGTGGAGGCTTTGTCGGATGTTCAAACTCAACCCTCAGTC
ACGTGACCCTTAACGCCATTTATAATTgggtatttttttgtttgagatta
attattttttagGGTATTAGAATTAAcacattaaattattttaacttttt
tgtatgaaaaacgactcattttacattttttaacaTACAGTATATTTAGG
TAACATGATAAAATTGAGAGACTTAAACACCCTCGCAAAAAGCCTATAAG
AAACTTATGGATCTTTCTCTAGGAATTATCGGTGTTTCACAGGCATGANN
Run BLAST on NCBI

transcript from alignment at sc0000541:189715..203607-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025646 ID=TCONS_00025646|Name=TCONS_00025646|organism=Clytia hemisphaerica|type=transcript|length=13893bp|location=Sequence derived from alignment at sc0000541:189715..203607- (Clytia hemisphaerica)
TTTTAGAGAAAAGTAGAAAATACAAAGAAGAAGGAGAAAATAAGTTATTT
AATGAGGTGAATGACTATTAGAGATACCACTCTCACTTTATTTAATTTAT
TAAAACACACACAGTACAAGGCATTTAAGGAAAGGTATGTCGTACCATCA
ATTACGTTCTGACGATCCAGATAACATGAGCGAGATGACAGAACAGACTT
CCTTTATNAGGGGTTGGAATAAGATTTCCTGGGTGGAAAATTTTTGAAAA
ATTAATTATAGGGCCCCCTCAGCTATTAGGTACCCAAGAGTACGCCTTGA
CTGGCAATTTATGATAATTATATAAAAGATGAGTGAGATGCTGCTCTTGA
AAGTGTAGATTTATGACTCCCTCCCCCTTGTCCTTATAAAACATCTTGCA
GAATACCCAAATAAGAAGATTAAGCATGATATTGTTTTAGCTTTTTTACT
GTCAGGAAGTCTTAGAAGGATCAGGAAGACTGCATTATTACACTGACTGT
AACAATCCCAAAAAGACTAATTTTTTTTCTCTTCCAGTTGATAAAGCAAT
CCCAAAACTGTTTCTTTATTTCATTATTGCACAAAGTTCTTTAACTGGAT
TGTCATAATAATAAAAATTGTTACAATTAAAAACATAAAACTGCTGAAAC
TGCTACATGATATAAAGAAATTGACAGCAGATGGCGTCTACTACAACCAT
TGTTATTCGAAAACATTCCATCATTCCATCATAATGTGAATTTACAATAG
TATTGAAAACATTTCACTTTTTCTTTTTAATGTAGTTTTTAAAAGTAGTG
TAGTAATCGTATAATAGTGTGATAGTAAGCTAGTTTTCCTTTTATTCCCT
GGAGTTCTGTATCCAAAAGGAAATTAGACGAGTAGTGAATTGACAATTAG
ATTTTCCTTTGTGGAAAAGTTGATTTACATTTTTGTTGATTTTTTTGATA
ATCTCTATCACTGTTCCTTTTAATAACTGTTGCTAGGTATTAACCCTTGA
CCTCTGGACGTCAGGATTGATTTAAATGTCATGTTTGACTTATGAAAAGC
TTATAATGATTATAAGCTATATAAAAAAAACACAAGATCTGTTAAACAGA
TCAAATATGTTTAACAGAAAAAAATCTACATAGTAACAAGTGTTTTACTA
CGGATTCTTAATTTCGATTCTCTGATTTTTTAGAGAAAAGTAGAAAATAC
AAAGAAGAAGGAGAAAATAATTATTTAATGAGGTGAATGACTATTAGAGA
TACCACTCTCACTTTATTTAATTTATTAAAACACACACAGCACAAGGCAT
TTAAGGAAAGGTATGTCGTACCATCAATTACGTTCTGACGATCCAGATAA
CATGAGCGAGATGACAGAACAGACTTCCTTTATAAATCCAGCTGATGCTA
TTGCAAACCAACTCTCCAAAAATATTGCACTGGACATAGGATCCAAATGG
AAAGATTATAACTCGAATAGGAGAATCGAGAAACACAAAGTAGACAGTCA
TCGAAAGGGACCAGCTCCCATTGAGGAAGCAGATGGCATGAAAAAAGGAG
TCACCAAGGCCACATATGGTACTCTTGATTCAGATGTAGAGGAACTCGAA
TTTGATGACATTGATACTCGACAAAATGCAGCATCAGACTCTAATCCATA
CAATAAAGTCAAACCTAAAACGAATGCTAAGGGTGACTCCTTAGCCAGTT
GTCGAGCATTGATTGTTTATTTTTCAAAACTAGCCAAGAGTCGAGATGAT
GATGAGACTATAGATATGAATTTTGTTGATTCGTTACTACAAAATGGTGC
TGATATCAATTTCTCTGATAAACACGGCCAAACAGTAATGCATGAGATTT
CAAGGGCGTGGCACCCTGATGTCGCCAAATTTGCAATCCAGCACGGTGCA
GATGTAAACAAAGCAGATAAACACGGCAGGTCAGCTTTACATTTAGCGGC
TGCCGTTGATTATGATGATATGATTGAGTTTTTGGTACACAATGGAGGTG
AGTTTTTGATCCGTTTGTTTGCTTTTTGTGATCTTTCCTTCATTTTTTGA
CATAAAATCTCAAATAGACCCCTGAGAGCATTTGCCTTTCTTTCACGAAA
TTTCACTGGACTTACCCTTTATGGAACAAGAGTTTGAAGACTGACGCTTG
AGAGCTCTAGGTTCTTCAAATGATTTTATTTTGGTTTTCTTTCTGATGAT
ATTACTAAAAAATTATCTTTGCTTTTTTGTCTTTCTTTATTGCACACTTC
ATTTTAAATGTCAGCTTAAGATAGCATAGTGTGTTTTCAGGTCATGAATA
GTCTAGTGTTTTAAATGAAAGTATTACTACATCACTTTGCACAGATCAAC
ATCTGTAAATAAGACCCTGTTTACATCATACAAAACAAGGAACTTTTTCT
TTCCTCCATCATTAAAAAGATAAGTAGTTAATTAGAGATCTTGATATAAT
GACTTGTAGGTTTTCATTTTGTATAAATTATTTGGGAGTGCTGGTTGCTA
TGGTAGCTAATTAATCCTAGACCGTCTATTTTAACTAACTTACAATATTG
CATAATATGTTTAGGTAGTTAACTTCTTTGCTTTGAACTATTTTCAGTAG
ATTTTACTCATTAAAAAATCAGACCTTAAAAAACTTTCTAATGCGGACCG
AGCTAATTAAAAATCTTCAACATTCAGCTTTCCCCTAGCAGGCTAGCCCC
TAGAATAAAAAAAAATGGTCCCCCCTCCCCATTCTATGTGGTATTCCTGA
TTCTTTCTTCTTTATTCGTGTCAATATATCACGGAACAACATGGACTATA
CCCCTTTTAGCTTCAAAACAAATTTATAAAAGAAAAACAGCATCCATTGG
CAACCCCTTTATTTTTCTTCACGATTATTTAATGACTAATCGTCTTTTTC
AATTCCAGCCAACCTTGGTGCGAAAACGGTCGGTGAAAACCAAACTCCGA
TGCACTATGCAGCCAAGAACAATGCAGCAGCATCCTTGAAAATGATGTTA
AGGCTCGGTGCACATATCAATGACCGTGATTACAAGAAGAGAACACCACT
TTTTGTAGCTGCCGAAACAGGTAGGCCACTGTTCCTATTTGCAAATTTTG
TTGGATTCTTAAGTTTCTCAACAACCCTTCACGATTCTTCATTTAAGGAT
TACCGTAATTTTACTACTTACTGTTAAATCTTTCAACTGACTTATAAACC
TTCGCTGGTATTAATAGATTTTTAAAAGAGTCGTAATAGTGCAGTGGTTA
CCAACCAATGGCTTACGTAAAAAGGTCACGCTTTGTTTACACTTGGTACT
ATAACTCACTTGACAAGTGATAGCATGTACCTTTTTTCGGGTCAAACTAC
ATGACATAAATGCCAGGCTTTTTGTCGACACTTATATGGTTTTCGCCTTT
GCTAGGAAAACAGCGTTTCTTTCCATATTCCGAAAAGATTTTCATCAATT
ATGGTGAAGAAACACAAACGTCTTTTAAACGCTGTATTTGTAATGACGTG
AACAGATTTTGCAACAAGGACGCCGAAAATGATTTCTTTCGATTTTTTCA
TCATGTAACACTTGAACATTTCTTTTTACCTTAGCTCGAGCTGAGGCAGC
ACGTTTTCTGATTGAGCAAGGCGCACCGGCTGGTGTTTACGATTCGAGTG
GAACATCATGTTTGGCTCTCATGATCGAGAAAATGCCGCACGTTGCCATT
GAGGCGGCCGAACAGTTCCATTTGCTCGACCGCGCGTTCAGGAAGCATTA
TTACTACCTATCTTACATAGAACCAGATCCTCTCTTTCTTTTACCGCCTA
TACCGACCAGTAAACGTGAGCGGCGTGAACAAAAGGAGAACCAAAAGGAG
GAGAAACGTTTGATGAAAGAGCAAGGAAAGAAAGCGAAGAAACGGGAAAA
GACATACGCTAAAACACCACTAGAAGTAAGCATGGAGGATAGATTTTTTT
TNGAAAGCGAAGAAACGGGAAAAGACATACGCTAAAACACCACTAGAAGT
AAGCATGGAGGATAGATTTGTTTTGCTTTGATTAGTAACAGAAGGGATAA
TCAGATGGTTTGATATCTTGAGATTCTTTCTCTTTTCTTGAGAAAAATAT
CTGAATCTTTTTTCAGATTATCTTTCAAAGTTGAAATATTCATGACTTTT
TGTAATTACAACGTAAAAACCATGCGTAAGACCCTTTTACGGTAACTTTT
AATAACTATTCATCTCAAGTTTGGAAAATATTTAAAGGCCGGTCCATTCA
GAGGATTTACTCATCGCAGGGTTCAGACAGACCCTGGAAAACCTGGAAAA
CCTGGAAATAATATGATAAATTTTCAGAAAAATCAGGGAAACTCAGGGAA
ACCCAGGGAAAAAAAAAAAATTTCCCAGTCTGCTCAGGGAAACTCAGGGA
ATTTTATTTTTTGAAGAATGAATTTAAAATTTTTAAAGTTTTTTCTTAGA
TTCATTTAGATTTTTGCTAACAACAAAACTTACTAGTTTTAAAAGATACT
AATTTAAGTAGATTGTTGGCAGAGATATATTTTTTGTCTTGAAAATATGC
TGGAATGTGTTCGTCTTCAATTTTAGTGTTGTGTTTGCAGTAGTTTATTC
AATTTATCTAGATGATAGGTGCTAATCAAGTAGATTGTTGTTTTGACAGA
GAGAAAGACACTTACTATAATAAGGTTTTATTTTTTTTAGAAATAAGTAA
AAATGAGTAAGCAAGAAAAAACATATTTTCAAGATAATTGGTCAGAAATA
GACGAGTTTAAAGATTGGATTGCTCGATCATCAGTTNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAATATGGGAGTTCAGGCACTTAGAAGTCACGCA
TCTGGAAAGAAACATAAAGAGATAACACAGAAAGTGTCTTCCTTTTTTAA
AACGAAACCAGTTAAAGAGTCGTCACATGAGCAGAAATCAAAAGAGGATA
ACGAAAGGACAAAAAAGGCTCAAACAAGTATAGAATTGACTCTTACTTCT
GCAGATGTTACCAAAGCGGAGATTCGGTGGGCTCTAGATGGTATTCTGAA
GGGAAACTCGAACAATCAAAACGCTAACATCAGTCCCCTCCTTAATGCAT
GTTTTCCTGGTCATGAAACGATCAAGTTATTTTCACTAGGAGCTGATAAG
TTACGATACTCTTGCAATTATGGTTTAGCTCCATATTTTCGTTCCATTCT
TCAAGACGAAGTTAAAAAATCTGAAATCTATGTCATGTCTTTCGATGAAA
GTCTTAATGATGTAAATCAGAAATGCCAAATGGGTCTAATTGTTCGATAT
TGGGATGAGAAAACTCAACAAGTCACAGTAAGGTATTGGGATTGTTCTTA
TCTTGGACAATCAACACACGCTGATCTTCTGGAGCATTTTAGCAAGACTA
CTGAGCCTTTAGACCCATCTAAGATGGTTCAAGTTTCAAAGGATGGACCA
AATGTCAATCTAAAGTTTCTGAAAACGTTAATTTCTTCTCGTGAAGAGAT
AAAGCTTCCATCTCTTGTTGACATCGGAACTTGTCCATTATGTACATACA
GTCAATAATTCTTTTCAAGTTGGGGCTAAGAATGCAGAGTGGGACTTAAA
AAAACACTAAAGGGGATCTGGCAAATCTTTCACGATTCTCCTGCACGTCG
CGAGGATTACGAAAAAGAAACAGGGAGCACAGTTTACCCAAAAGCTTTCT
GAAAATTACATACGCATATTTGGTATTGATTTTTCCGTCAGTTCATTTCT
TCAAAACTTAAACTTGAGTCCAATTTTATAAAAAATGAACTACCGATGGA
TTCACAAGTGGTTCTTATTCAGGTCTAGAAAGCCTAGGTATATACCAAAA
TATTTTTTATATTCTTTTTTAGTTTTGTTTTCAAGACAGTGTAAAATTTT
CAAGGTCTAGGGTTTAAATACCTTAAATATGAACGTTTTGGGACTTCAAA
GTCCACCATTTTCAACATTTTACTGCATAAAATTTGAAAAATTTTGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGGAAAAAATAGCTAAAATGAGGAATT
TCTCAGGGAAAAAACCTTTGAAAATTGATTAAAATTCAGGGAAACTCAGG
GAATTTTATTTTCGAAGGTCTGTCTGAACCCTGTCATGAATGCAGAAGGT
TTCTGAGTCAAAAAATCTCCAACGACCTGATTGTATCTAAGCTTTTAAGA
CCGGTCTCCACTTTCGCGCGAAATGGGATACAGTTTTTTCTTAGCCTTTT
TTGCCTGAAGAAAAGATTACGTCATAAAAAAGTTTCGCGCGAACAAAAAG
GAAGGAGTCCATTTGTTTCTTACCTCAAAAATTCCATTTTGCCATCTTTT
CCCCAAATGCCACCATCGTGTGAAACAAATGGAAACCGTGTTAAAAATGC
AAAAGTCTACCATCTTGCAAACTCTTAGTTACGTCAATAATGGCCGCATA
AATTATGTCAGAAATGTAAACAAACAAACAAGAAAACGAAAGTGAAATGC
ATCTTAATTATGCAATTCCATATTGTCGCCATTTACAATAACATTCTTCC
ACCGTTTACCCAGAATGTAGAAACAAATGCGAATTTCTTTTTGCTTGGAA
AAGCTTGGCAAACTTTCACTTTTGACACAAATGATCAATGTAAATTGAGG
TGGTAAAAATGTAACTATTTTTTAACACTTTTGAACACACTTCGATGAAA
CAAATGGGAAAAAGGTGGCATAAGTGACATAAATGGTGCTGAAACAAATG
GACCCAAGTTTTACGTACTTTTTTTTAATCCGTTACGTCAATTTTGACCA
ATGGAATTGCTTCATTTTCAACCGACCAATGACCTTACAAAATGTCAAAA
AGTTTTCGCTCATGTCGCGCGAAAATGGAGACCGACCTTTAGCATCACTC
TTACGAAATCAAAAAAATCGATCACCGTAAGAAAGAAAGGGGCCAGATAA
TAGAAGTCCATATGAGAAAATAAACTTTATTAATAACTTCTGGGATCATT
TCAACAGGTCATCGTGCAATTCAACCAGTTGGATATGGTGATGCATCCAG
TCTTCCAACGTCTACTTCACGTCAAGTGGGGTTTGTTCGGAAAATTCGGC
TCTCTCATCAATGTCTCTATCAATTTGGTTTACACGCTTATTTGGACTTT
CCTTGGTATCTTTTTGCCCAAAGATCATGTGTAAGTTTGATTCAATTTTT
AACACTGAAAATTGTAAATTGGTTTGGTATTTATAACTGTCAATTAGAAA
ATGTTCTACCGTTTCCTAATAGAAGTATTACAAATGTTTAGCGAACAAGA
TGTTTTGACATTTTCGTTGCCGTTCTTGTAGATACTACACTCCAATGTCA
TCAATGTGGTGGCGATTGGTGCTTGAATTGATTGCTGTTAGTTTGACTTG
CTATTTTATTTACATGGTGAGTATAAAAGTCCGTTATACTGGGTTCATTT
TCTTACCCTATTTTATGCATGACCAGTTGGGATGAATTAGAGAAATGTTA
GATTTGTCTGAATATACCCATTTCACCTTCATAAAACATATTCGTTATAT
TGGTCAATATGTATTGTATATGCCGTAAAAAGTACCCGAAAAACTACTAG
GTTCATGACTATTTGTAAATTTTAAAGCAATAAAACTAATGATAAATTTG
ATGTGTAAAAGATTACATCATGAATACCATGAACTCGAGTGAATTCATGG
TGTAAATGGTGAAAATCTCTTTATGACTTTTAGGAAATATCTCAATTACG
AATCACGGAGAAAGTGCACAATCGCTGGCGTCAATGGCGGACACGCCATG
TCGAGAAAGATCTTCAGTATTGCCACGAGCGTTGGCCGGAGGAGAAAAAG
TACCTGGAATCAGAGCTAGCCCAGATCCGGACCTTCCAGCGGACTTATTT
CCGTGAGCCGTGGAATATTTTTGAATGGATTGCGTACTTCGTTGTTCTTA
CCCTGGTTCTAACGCGTATCCTTGCCGTCGCGATGAACGACCGCGTGGCC
GAATCCATTCACCCGAGGATTTATTCGCTAGGCTTGATTGTTATTTGGTT
GAGATTCATGAGAGCGTGTCGTGCGTTCAGAAGTTTGGGTCCTTTCATCT
GTATCTTAGGTACGCCAAATTAGTTCAAAATATTCTTCTTTGACTGACAC
ACGGGAGGTTTTTTTTTAGATAAAAAATCATCCATGGCCAGTGTGGCAAG
CCGACCTACTTTTCCCCGTTACGGTAACCTACCCTATGTCTCCTTTTCAG
GTTCTTCAATCTTAGTTTAATTATAAAATAATTTATACCTTAGACTGTCA
ACTTTTGAAAGGGGCTCCTTTTGACATGACATGATGTAAAGGGTTATTGA
GATTCGTTCTATGGAGAGTCCCCATATTGGAAGAGATGGTATGAACTGAA
ATATCTGAACAAGAAATCTGAAGAAGCTGTTTTATACCCTTAGTTTTTCC
TCTTTTCTCAGGCTCTGTTATTGAAGATACGATGAAGTTTGCATTCCTGT
TCTTTGAATTCTTCATTCCGTACACTGTTGGGTTCTGGATCATTTTTGGT
GGACCAGAGAACCCGGGCACCGATTGGACTGAATTCAATGATCTCATCTA
TTCTGTCTGGGGTGTAAGTATCTGAATGATCTTATTCTTTGGTGGGGATT
TAAACAAGTTATTTACTTTTTGTCAGGAATTCTTTGTTGGTACAATTTTA
GCCTCGCTCTTTATTGGTTAGACAATTTTATAACTTTAAGAGGTTTTGAT
TGAGTACACCTAAGTCAGCCATACTTTCAAGGAAGNGGTTAGACAATTAT
TTTTATAACTTTTATAACGAGGTTTTGGTTGAGTACACCTAAGTCAGCAG
AAGTCAGCCATACTTTCAAGGAAGAGCTGCAGCGTAACTACGACGTTTTT
TTGTGAAAGTGATTTTTTTCTGAAGTAAATAATAGTACTGTTTAAGAATT
GAGAAGATAGTAGACAAAAAGAACCAATAATTAAAGCAGTAAATCTTATC
ATAATCAATGGAAGCAAGCAGATTTTTTGCTAGAGATAAAGTTTACAGGA
ACAATGGAAGAGAGAAGTTAACAGAGTGATATAGAATGACCAGGTTTGTC
AGCAGCATTATGACTTTTTTTTTTATATTTCATAAAGTTTTTGCTATTGA
GACATTCAAAATTACAAATTATTAAATTAGTCTAGCATCAATCGACAAAG
ACTTTTATTAGTATTCATTTCAAAAGCTTTAAGTTTTCAGCATCTCTTCA
CATTTCAGATGACGTTGATGGGTGACTTTGATTGGGAAGGTTTGATCAAA
AAAGACCGCTTGATGGCTCAAATTCTTTGCGGAACGTATTTCGCTCTTGC
TGGTGTGGTCTGTATGAATCTCTACATTGCTTTGTTGTCAGGTAAGCCAG
GAAAAAAATACACGTATTTTACAAGCATAAACTTCTTCAAGAAGATTTAA
GAAAGGTAGAAATAATCATTTTGACAGTATGAAGTATCATCTGCAGTATT
TTTCGCCCCATTTTCTAGCACCCTTTAAAGGTGTCATCATGTTTGGCTTA
GAGTTATTAAGTAGAAAATCCTAAAAAAGAGACATTTCCTTAATGCCCCA
TCCGAACAAAATATCTTTTCATTCGAATGGCATCCAAGATTCTTCACAAA
ACTCTTTCCAAGAACTTGTGCAACTGCAGAGACAAAACATCTGAAGATTT
AACTCAGAGTTAAAAAAAACTAACGTATCGTATTACTTCGAGTAAACGTC
CCCTTCTTTAAACGCCTAATAACCTAATAACCAAAAGAATTGATGAACAC
CCGGGGTGTTTATTCAAAGTAAATACTGTATTCTTATTATGTGTGTTTGC
ACTGCAAAATAGAGAGTTACAAATTAGACTTAAAAAAAAAACAAAGAAAT
TACCAACTTGATAAGAATTTATTTTCATTTACGTTAGATACGTTTGCACG
TGTGTACGCTCAAGCGCAAGCCAACGCCGTCATGCAACAAGCCAAAACTG
TTATCTTGTTAGAAGGGAAACTTGAAAAAGAGAAGAAATTGAAATTCGGA
CATTACTTACAAGATGAATGCTCTCCTGAGGTATGTTGAACGTCTTTTTT
AGTGGTTCTTATCGGCGATCCAAAAAAATATCTGCAATCTGAAGAGTACA
ATATATCTTGTATTTTACATGTAAAAATATAAATTGATGAAAAGATGTTG
TTGCATTGTAGTGGTAGAAGCAATCTAACGTCACTTTGCTACAAAAGTGT
CCTCCAACACAAAAAGTGCATTTTTTGGGTCACCGATAAACCAGTTATCA
GAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTTGCTCGTACAATATGGAAATATTTCACTCG
TTCCGGATTTTCCGTATATTTTCCTCGCCTAAAGGCTCGGAAAATATTGT
ACGGAAAAATCTCCGAACTCGTAAAATATTTCTCATATTGTACTCACAAC
TGTCCGATAACTATTACATGTTAATTAAAATATATTTCATAATTATACAT
TTTTCAACTCAACTCATTTATATTTCTGATATTTTTCAGACGACCGACAT
CTGACAAATACAAATAGGTCGAGCCTTCATTTTTTTCCGTGGCAAATAGG
TCGAACCCTTAAAAAATACCAACGACATTTAAAGGGTTAATATCCATGTC
AACCCTTCACAGATAAATACATTTTGCCCTTGTTGAACTTGAGCCAAATC
TTTTAATGTTTTAAAGGTTCAATATGGTTTTATATGCTTGATCTTTTCCA
TTGCCAAGTACTGCCTTAGGCTAGGTAGATTGTCCAGAGGTTTTGAAGGG
ATTTAGAGTTATTCGGTAAAACTACCAATTTGATCTAGAACATTTGGGAC
TATTTAAACCCCTTTTGAGACTTTTATTTGAAGAAATAGCCATCTTTATA
AAGAAAGCGTATTTAGAACATCTTAAGAACAAGCTACTATACTTTTTCTT
CTCTTGCAGGAAGTGTACTCACGTGACGAAGGGAATTCCCCTGATGATCA
CGATAATGACATGTTTGAAAAAGTCACACGTCAAATCACCAACCGTATCG
ATGAACTTGAAGATAACATGAAACGCAGTGGACAAATGCTCTCTGATGGA
CGTCATGGTGGACCCGGTGGCGGCGGTGGAGGACCTGGAGGACCTGGCAG
CCCTGGAGCTGATGGAGGTGTCTCGTCACTTGTCAATCACCAAACAGGTA
GGGACGTTTTCACATGTTGACAAGAAAAGCGGAAAACTCGTTTTAGAGTT
ACTTTGTTGAGTTAGTAGATCTTGTTAATTAGCGTCTTTGCGTTAATGCA
ACATTTTGTCTTTTGCCAGTCAGCAAATATTTTCAGAAATTTTCTTTTTT
TTATACAGTAGACTCTCACTAATTCGAAATATTTTTATCGAATCTTTACA
TGATTTGTACTCATTTTTAGTCTCCGTCAAGAAGAAATTAAATTTTCTTA
TCGAGTTCTAACTAGTGTGGCGTATAAGTTGGATGAAAAGAATACCTTTT
CAAAATTTACCATCTTTTTCCACCCATCAAAACAGGTCAGATTGATGACG
TCAAGTACGAGTTGAGTGAACTGAAAAATCTGATGCACAAAATGATGTCT
TTGCCGCCACCTTCCAACAAGGAGCCCTCTGAAATCCCTCCCAAGGGTCT
TGTCGTCTCTCTTGATCCAATCTACCCCCCTGCCCATCCGTTACCGGGGT
ATCAGCAACAACCACCACCAAACCCCTACCCACCACAGACGAACAACCCC
TATCCCCCACCACCATCCATGGGGTACATGCCTCCACCCAACTACGCAAC
AGACGCAGAAGCAGATCGTGGCAAGGGACCACGACGACGCGGCCGACGTG
GTAAAAAAGGTCCAGGTAGCGGTTACGATAGTGACAGCAATAGCTTCTAT
TCGGAACAAGTTCCAGTGCAACATCATCAACGCCCACCGCCCCACCACCA
ACAACAGCAGAGACGCCCTAGGAGTCCATCTTCAGTACAATCAGCACCTA
TCAGCAAGAAGAACAGAAGAAAGAAGAAGAATCTTGGTGGAAGCTGGGAA
GATATCCGAGCTGATATCAATACTTAGATCATACAATTTCGATTTGCAGA
AGCGATCGATCCTTATGTGAAAGTTACTTACTAAATTTAAAATACTACCG
TCAATTGTTTCAAGGCTGTTGCAGGCTGCACCGATCTTCAAATGGTCAAG
TCATTTTGAATAATTTTCATATAAACTATTTAGTTGTTGGATCTAACGAG
AAGAGTTGATTCTCCACCAACACCTTGCTACACAGCTTTTCACTTTCACT
TCTTAACCTTCAAACATTCGAAACAATGTGCCCTACTCAATATCTATTGT
TAACCGCTATCTGCTCTCTGCCAACATTAATTATTTTACTATGGTCTTAA
TAAAGTGGAGGCTTTGTCGGATGTTCAAACTCAACCCTCAGTCACGTGAC
CCTTAACGCCATTTATAATTGGGTATTTTTTTGTTTGAGATTAATTATTT
TTTAGGGTATTAGAATTAACACATTAAATTATTTTAACTTTTTTGTATGA
AAAACGACTCATTTTACATTTTTTAACATACAGTATATTTAGGTAACATG
ATAAAATTGAGAGACTTAAACACCCTCGCAAAAAGCCTATAAGAAACTTA
TGGATCTTTCTCTAGGAATTATCGGTGTTTCACAGGCATGANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014393XLOC_014393Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025646-exon-sc0000541-1575043694:203467..203607TCONS_00025646-exon-sc0000541-1575043694:203467..203607Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:201611..202358TCONS_00025646-exon-sc0000541-1575043694:201611..202358Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:200538..200699TCONS_00025646-exon-sc0000541-1575043694:200538..200699Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:199683..200023TCONS_00025646-exon-sc0000541-1575043694:199683..200023Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:195328..195500TCONS_00025646-exon-sc0000541-1575043694:195328..195500Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:195092..195176TCONS_00025646-exon-sc0000541-1575043694:195092..195176Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:194399..194774TCONS_00025646-exon-sc0000541-1575043694:194399..194774Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:193895..194046TCONS_00025646-exon-sc0000541-1575043694:193895..194046Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:193117..193249TCONS_00025646-exon-sc0000541-1575043694:193117..193249Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:192428..192570TCONS_00025646-exon-sc0000541-1575043694:192428..192570Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:191211..191448TCONS_00025646-exon-sc0000541-1575043694:191211..191448Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1575043694:189715..190872TCONS_00025646-exon-sc0000541-1575043694:189715..190872Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:203467..203607TCONS_00025646-exon-sc0000541-1510915933:203467..203607Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:201611..202358TCONS_00025646-exon-sc0000541-1510915933:201611..202358Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:200538..200699TCONS_00025646-exon-sc0000541-1510915933:200538..200699Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:199683..200023TCONS_00025646-exon-sc0000541-1510915933:199683..200023Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:195328..195500TCONS_00025646-exon-sc0000541-1510915933:195328..195500Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:195092..195176TCONS_00025646-exon-sc0000541-1510915933:195092..195176Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:194399..194774TCONS_00025646-exon-sc0000541-1510915933:194399..194774Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:193895..194046TCONS_00025646-exon-sc0000541-1510915933:193895..194046Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:193117..193249TCONS_00025646-exon-sc0000541-1510915933:193117..193249Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:192428..192570TCONS_00025646-exon-sc0000541-1510915933:192428..192570Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:191211..191448TCONS_00025646-exon-sc0000541-1510915933:191211..191448Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1510915933:189715..190872TCONS_00025646-exon-sc0000541-1510915933:189715..190872Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:203467..203607TCONS_00025646-exon-sc0000541-1491911889:203467..203607Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:201611..202358TCONS_00025646-exon-sc0000541-1491911889:201611..202358Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:200538..200699TCONS_00025646-exon-sc0000541-1491911889:200538..200699Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:199683..200023TCONS_00025646-exon-sc0000541-1491911889:199683..200023Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:195328..195500TCONS_00025646-exon-sc0000541-1491911889:195328..195500Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:195092..195176TCONS_00025646-exon-sc0000541-1491911889:195092..195176Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:194399..194774TCONS_00025646-exon-sc0000541-1491911889:194399..194774Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:193895..194046TCONS_00025646-exon-sc0000541-1491911889:193895..194046Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:193117..193249TCONS_00025646-exon-sc0000541-1491911889:193117..193249Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:192428..192570TCONS_00025646-exon-sc0000541-1491911889:192428..192570Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:191211..191448TCONS_00025646-exon-sc0000541-1491911889:191211..191448Clytia hemisphaericaexon
TCONS_00025646-exon-sc0000541-1491911889:189715..190872TCONS_00025646-exon-sc0000541-1491911889:189715..190872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000541supercontigsc0000541:189715..203607 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.1955	12.9967	46.4247	43.8483	12.7188	28.6097	25.1917	32.5595	39.7986	50.6207	35.2341	32.3382	27.5112	21.6837	22.9597	28.6676	25.8938	22.3121	22.4763	41.3284	14.7028	12.0728	23.424	20.6317	11.3562	12.3211	23.803	18.3691	18.38	21.2779
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025646 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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