TCONS_00025616 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025616
Unique NameTCONS_00025616
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3304

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025616 ID=TCONS_00025616|Name=TCONS_00025616|organism=Clytia hemisphaerica|type=transcript|length=3304bp
NNTTTGTCCATGTTTGGATCAACTTCACTTGATTGGATGAGTATTTTGTA
TTACTGAACACAACAAACACCATGGTCGTACTTTCCTGCCCGATCCCAAA
CTGTGGTTACACCACTGAGGACGTAGACGTAATTGGTTCTGCTGCCTTAC
TGAATGCGCACACCACCATACACGCAATGAATGCTGCCCAGCCACGTGCC
GCACCTGTCGTACGTGCCCCAAAGCTTGAACGTCCAAAGCTCCATATGAA
TGCCACAACTGAGGATTGGAATGCATTCACACGACGTTGGCAGACCTATC
GTACCGGTTCCCAAATACCCGATGTAGTTGCGTCTGGCCAGCTCTTTGAG
TGCACAGAGAAACAGCTTGGAAATATTGTGCTCAGAGCTAAACCAAACTT
CACTACGCTTGCCCTTGATGAAGCGCTTGAAACATTGAAAAAGCTAGCAG
TTATTCCTGTTGCGCTAGGTGTTGTACGATCAGAACTGTTGGCCATGCAC
CAAGGTTCCGACGAACCCTTCCGAACATTCGCTGCCAGGGTTCAGGGTAA
AGCAGAGACATGTGAATTTAAAACACTATACGATGGTTCTTGTAGCAACT
GCGATACTGCTTATCAAGGAGAGGTTTATTATACCGACGAAGTAATCAGA
GATGTTCTCCTGAATGGCATCGCGGACATTGACATTCGGCGTGACGCTCT
TAGTGCTGATGATATACAAACTAAACCTGTAACTGACGTGATCGCTTTTG
TTGAGAACAAAGAGACAGCACGTAATGCAAATCCCATGTCCTCGGTGACA
GCACTTTCAGCTTACCGACGAGGCTATCTTCCAGATGACCAGAAACGAAG
CACCGACACGCGTCGCCGCAATCGTGTACCCTCCCCGAGTGAGGCTGACA
AATCGAAGACTGCCAATTGTCCAGATTGCCACAAGGTGTTCAACGTATTC
AAGAAGAAACCAAGAGGTTGGAACCGTAAACCCCACACTCGATGCGAACA
ATGCTGGAGAAAGAACAGAGACAACCAACAGAACCAAACCAGCCAGTCCA
ATGCCATCAGTAGCTACGACTCACTTGGCCAAATCTCAACCATATCCCAC
TCCGAGTCCTCAAATGTTGCTGCCAACTTACGTCCACAACCATCGAAACC
GCTCGAGCATCAAATTTTCACAAAAGGAGAATGGCGACGTGCTCGTATGT
CATCCCACCCAACAGTCAACCTCCGTCTTACACTTGACAAAAAGAACTCC
ACACCCGTTGACGTTACAGCCGTTGCTGACACTGGCGCTCAGTCCGACAT
ATGGTCCCTAGAACACTTTCTGAAAGCGGGATTCAAAATGTCAGACTTAT
CACCTGCTACACTCTCTCTGAACGCTGCCAACAAATCGCCCATTCAGATA
AATGGAGTTTTCCGTGCCAAAATGACAGGTGCAGCAGTGGGAAGTCAAAA
TGAGATATCTTGTCGTTCCATGATATATGTTAGTCGAGACATTAAGTGCT
TATATTTGTCGTATGACTCTATGCTTCAACTGGGTATAATAAACCGAGAC
TTCCCAGCCATTGGATCGTTCAAAAACAACATTTCGAACAAGAAAGTGTC
TGCAGACCCTCAGGCTAACGTAACCCTGCCTGTGGGATCCATCTGTGGTG
CAACCAACGATGATGGGGGCATATGTGATTGTCCGATAAGAACTATACCA
CCACCCCGTCCTGATGAATTACCCTTCCCTTGCACCCCCGAGAACAGTGC
TCGAATGCGTGATTGGCTTCTTGACCGCTATGGGAGCTCTACATTCAACA
CATGCCCACATCAACAACTTCCTCGTATGGATGGTCCACCCGTTGAGATT
CACATCAAGGATGATGCTGTCCCCGTCGCCCACCACAAAGCGATACCTGT
GCCAATCCACTGGAGAGATCAAGTGTACGCCGACATTGCCCGTGATGTTG
CTCTCAATGTGATCGAACCAGTACCGCTTGGGGAACCATCCGATTGGTGT
CATCACATGGTTGTGGCAAGGAAGCATGATGGCTCTCCACGTAGAACGGT
TGACTTGTCTCCATTGAACAAATTCTGTAAACGCGAGACTCACAACCCCG
AACAACCATTCCACATCGTCCGTCGTGTTCCTCGTGATACCTGGAAAACT
GTAATAGACGCTTGGAATGGCTATCACAGCCTTCCTTTACGTAAATCTGA
TCGCCACTTGACAACATTTATAACACCAATCGGTAGATTTCGTTACAAGC
GTGCACCGCAAGGCTTCTTATCTTCAGGTGACGGTTACAACCGACGTTTC
GACACCATCCTGACAGACTTTAACCGCAAAGAACGTATTGTTGACGACAC
CCTTCACTATGACACTGACTTAAATGAACATTGGTGGAGAACTATTGACT
TATTGACTCTTATTGGAAACTCAGGTGTTGTTGTTAATCCTGAGAAATTC
CAATTTGCACAGAAAGAGGTTGATTTCGCTGGCTTTCGCATTACGCCAGA
CAGAGTCGAACCTCTCCCAAAGTATTTCAACGCTATTCGTAATTTCCCAA
CACCGTCATCAACGACTGATATTCGAAGTTGGTTTGGTCTGGTGAATCAG
GTATCCAACTACGCCCAGCTTCGAGACCTTATGGAACCATTTCGAAAGTT
CCTCTCACCACGAACACCATTTGAATGGAACGCAGAGCTTGATGCAGCTT
TCGAATCATCCAAACGAGCAATCATCGATGCCATCAAGGAAGGTGTAGAA
ATCTTCGACATTGGACGCCCGACTGGTCTTCGCACCGACTGGTCAAAGAA
AGGGATTGGATACTTCTTACTTCAGAAACATTGTTCCTGTGACGATACCG
ACCCAGACTGTTGCCCCGGTGGCTGGCGCATCACGCTGGCTAGTTCCCGA
TTCCTCAAACCGTCTGAGAAACATTACGTTGCGATTGAAGGTGAGGCCCT
TGCCATTACATGGGGTCTAGAGCAAAGTAAATTTTTCACACTCGGCTGTC
CCGATTTGACCGTCATTACCGATCATAAGCCTCTGGTAAAGATATACGGT
GACAAGAGGCTTGACGAGATCAGAAATACAAGACTTGCTCGATTAAAGCA
AAGAACACTACCTTGGTATTTCAAGATCATTCACCTCCCGGGAAAGACCA
ACCCAGCTTGTGATGCTACATCCCGCTATCCAGCACCTACGGAAGAGCAA
GATGACATCACCGAATCCTTGGTACTCGCCTCCATCCAACGTCAGACGAA
TAGCATCACATCAATCACGTGGGATCAGCTCGTCGAGGAAACCCAGAAGG
ATGN
Run BLAST on NCBI

protein sequence of TCONS_00025616-protein

>TCONS_00025616-protein ID=TCONS_00025616-protein|Name=TCONS_00025616-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1077bp
MVVLSCPIPNCGYTTEDVDVIGSAALLNAHTTIHAMNAAQPRAAPVVRAP
KLERPKLHMNATTEDWNAFTRRWQTYRTGSQIPDVVASGQLFECTEKQLG
NIVLRAKPNFTTLALDEALETLKKLAVIPVALGVVRSELLAMHQGSDEPF
RTFAARVQGKAETCEFKTLYDGSCSNCDTAYQGEVYYTDEVIRDVLLNGI
ADIDIRRDALSADDIQTKPVTDVIAFVENKETARNANPMSSVTALSAYRR
GYLPDDQKRSTDTRRRNRVPSPSEADKSKTANCPDCHKVFNVFKKKPRGW
NRKPHTRCEQCWRKNRDNQQNQTSQSNAISSYDSLGQISTISHSESSNVA
ANLRPQPSKPLEHQIFTKGEWRRARMSSHPTVNLRLTLDKKNSTPVDVTA
VADTGAQSDIWSLEHFLKAGFKMSDLSPATLSLNAANKSPIQINGVFRAK
MTGAAVGSQNEISCRSMIYVSRDIKCLYLSYDSMLQLGIINRDFPAIGSF
KNNISNKKVSADPQANVTLPVGSICGATNDDGGICDCPIRTIPPPRPDEL
PFPCTPENSARMRDWLLDRYGSSTFNTCPHQQLPRMDGPPVEIHIKDDAV
PVAHHKAIPVPIHWRDQVYADIARDVALNVIEPVPLGEPSDWCHHMVVAR
KHDGSPRRTVDLSPLNKFCKRETHNPEQPFHIVRRVPRDTWKTVIDAWNG
YHSLPLRKSDRHLTTFITPIGRFRYKRAPQGFLSSGDGYNRRFDTILTDF
NRKERIVDDTLHYDTDLNEHWWRTIDLLTLIGNSGVVVNPEKFQFAQKEV
DFAGFRITPDRVEPLPKYFNAIRNFPTPSSTTDIRSWFGLVNQVSNYAQL
RDLMEPFRKFLSPRTPFEWNAELDAAFESSKRAIIDAIKEGVEIFDIGRP
TGLRTDWSKKGIGYFLLQKHCSCDDTDPDCCPGGWRITLASSRFLKPSEK
HYVAIEGEALAITWGLEQSKFFTLGCPDLTVITDHKPLVKIYGDKRLDEI
RNTRLARLKQRTLPWYFKIIHLPGKTNPACDATSRYPAPTEEQDDITESL
VLASIQRQTNSITSITWDQLVEETQKD
Run BLAST on NCBI

transcript from alignment at sc0000540:98722..102025

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025616 ID=TCONS_00025616|Name=TCONS_00025616|organism=Clytia hemisphaerica|type=transcript|length=3304bp|location=Sequence derived from alignment at sc0000540:98722..102025 (Clytia hemisphaerica)
NCATCCTTCTGGGTTTCCTCGACGAGCTGATCCCACGTGATTGATGTGAT GCTATTCGTCTGACGTTGGATGGAGGCGAGTACCAAGGATTCGGTGATGT CATCTTGCTCTTCCGTAGGTGCTGGATAGCGGGATGTAGCATCACAAGCT GGGTTGGTCTTTCCCGGGAGGTGAATGATCTTGAAATACCAAGGTAGTGT TCTTTGCTTTAATCGAGCAAGTCTTGTATTTCTGATCTCGTCAAGCCTCT TGTCACCGTATATCTTTACCAGAGGCTTATGATCGGTAATGACGGTCAAA TCGGGACAGCCGAGTGTGAAAAATTTACTTTGCTCTAGACCCCATGTAAT GGCAAGGGCCTCACCTTCAATCGCAACGTAATGTTTCTCAGACGGTTTGA GGAATCGGGAACTAGCCAGCGTGATGCGCCAGCCACCGGGGCAACAGTCT GGGTCGGTATCGTCACAGGAACAATGTTTCTGAAGTAAGAAGTATCCAAT CCCTTTCTTTGACCAGTCGGTGCGAAGACCAGTCGGGCGTCCAATGTCGA AGATTTCTACACCTTCCTTGATGGCATCGATGATTGCTCGTTTGGATGAT TCGAAAGCTGCATCAAGCTCTGCGTTCCATTCAAATGGTGTTCGTGGTGA GAGGAACTTTCGAAATGGTTCCATAAGGTCTCGAAGCTGGGCGTAGTTGG ATACCTGATTCACCAGACCAAACCAACTTCGAATATCAGTCGTTGATGAC GGTGTTGGGAAATTACGAATAGCGTTGAAATACTTTGGGAGAGGTTCGAC TCTGTCTGGCGTAATGCGAAAGCCAGCGAAATCAACCTCTTTCTGTGCAA ATTGGAATTTCTCAGGATTAACAACAACACCTGAGTTTCCAATAAGAGTC AATAAGTCAATAGTTCTCCACCAATGTTCATTTAAGTCAGTGTCATAGTG AAGGGTGTCGTCAACAATACGTTCTTTGCGGTTAAAGTCTGTCAGGATGG TGTCGAAACGTCGGTTGTAACCGTCACCTGAAGATAAGAAGCCTTGCGGT GCACGCTTGTAACGAAATCTACCGATTGGTGTTATAAATGTTGTCAAGTG GCGATCAGATTTACGTAAAGGAAGGCTGTGATAGCCATTCCAAGCGTCTA TTACAGTTTTCCAGGTATCACGAGGAACACGACGGACGATGTGGAATGGT TGTTCGGGGTTGTGAGTCTCGCGTTTACAGAATTTGTTCAATGGAGACAA GTCAACCGTTCTACGTGGAGAGCCATCATGCTTCCTTGCCACAACCATGT GATGACACCAATCGGATGGTTCCCCAAGCGGTACTGGTTCGATCACATTG AGAGCAACATCACGGGCAATGTCGGCGTACACTTGATCTCTCCAGTGGAT TGGCACAGGTATCGCTTTGTGGTGGGCGACGGGGACAGCATCATCCTTGA TGTGAATCTCAACGGGTGGACCATCCATACGAGGAAGTTGTTGATGTGGG CATGTGTTGAATGTAGAGCTCCCATAGCGGTCAAGAAGCCAATCACGCAT TCGAGCACTGTTCTCGGGGGTGCAAGGGAAGGGTAATTCATCAGGACGGG GTGGTGGTATAGTTCTTATCGGACAATCACATATGCCCCCATCATCGTTG GTTGCACCACAGATGGATCCCACAGGCAGGGTTACGTTAGCCTGAGGGTC TGCAGACACTTTCTTGTTCGAAATGTTGTTTTTGAACGATCCAATGGCTG GGAAGTCTCGGTTTATTATACCCAGTTGAAGCATAGAGTCATACGACAAA TATAAGCACTTAATGTCTCGACTAACATATATCATGGAACGACAAGATAT CTCATTTTGACTTCCCACTGCTGCACCTGTCATTTTGGCACGGAAAACTC CATTTATCTGAATGGGCGATTTGTTGGCAGCGTTCAGAGAGAGTGTAGCA GGTGATAAGTCTGACATTTTGAATCCCGCTTTCAGAAAGTGTTCTAGGGA CCATATGTCGGACTGAGCGCCAGTGTCAGCAACGGCTGTAACGTCAACGG GTGTGGAGTTCTTTTTGTCAAGTGTAAGACGGAGGTTGACTGTTGGGTGG GATGACATACGAGCACGTCGCCATTCTCCTTTTGTGAAAATTTGATGCTC GAGCGGTTTCGATGGTTGTGGACGTAAGTTGGCAGCAACATTTGAGGACT CGGAGTGGGATATGGTTGAGATTTGGCCAAGTGAGTCGTAGCTACTGATG GCATTGGACTGGCTGGTTTGGTTCTGTTGGTTGTCTCTGTTCTTTCTCCA GCATTGTTCGCATCGAGTGTGGGGTTTACGGTTCCAACCTCTTGGTTTCT TCTTGAATACGTTGAACACCTTGTGGCAATCTGGACAATTGGCAGTCTTC GATTTGTCAGCCTCACTCGGGGAGGGTACACGATTGCGGCGACGCGTGTC GGTGCTTCGTTTCTGGTCATCTGGAAGATAGCCTCGTCGGTAAGCTGAAA GTGCTGTCACCGAGGACATGGGATTTGCATTACGTGCTGTCTCTTTGTTC TCAACAAAAGCGATCACGTCAGTTACAGGTTTAGTTTGTATATCATCAGC ACTAAGAGCGTCACGCCGAATGTCAATGTCCGCGATGCCATTCAGGAGAA CATCTCTGATTACTTCGTCGGTATAATAAACCTCTCCTTGATAAGCAGTA TCGCAGTTGCTACAAGAACCATCGTATAGTGTTTTAAATTCACATGTCTC TGCTTTACCCTGAACCCTGGCAGCGAATGTTCGGAAGGGTTCGTCGGAAC CTTGGTGCATGGCCAACAGTTCTGATCGTACAACACCTAGCGCAACAGGA ATAACTGCTAGCTTTTTCAATGTTTCAAGCGCTTCATCAAGGGCAAGCGT AGTGAAGTTTGGTTTAGCTCTGAGCACAATATTTCCAAGCTGTTTCTCTG TGCACTCAAAGAGCTGGCCAGACGCAACTACATCGGGTATTTGGGAACCG GTACGATAGGTCTGCCAACGTCGTGTGAATGCATTCCAATCCTCAGTTGT GGCATTCATATGGAGCTTTGGACGTTCAAGCTTTGGGGCACGTACGACAG GTGCGGCACGTGGCTGGGCAGCATTCATTGCGTGTATGGTGGTGTGCGCA TTCAGTAAGGCAGCAGAACCAATTACGTCTACGTCCTCAGTGGTGTAACC ACAGTTTGGGATCGGGCAGGAAAGTACGACCATGGTGTTTGTTGTGTTCA GTAATACAAAATACTCATCCAATCAAGTGAAGTTGATCCAAACATGGACA AANN

Coding sequence (CDS) from alignment at sc0000540:98722..102025

>TCONS_00025616 ID=TCONS_00025616|Name=TCONS_00025616|organism=Clytia hemisphaerica|type=CDS|length=3231bp|location=Sequence derived from alignment at sc0000540:98722..102025 (Clytia hemisphaerica)
ATCCTTCTGGGTTTCCTCGACGAGCTGATCCCACGTGATTGATGTGATGC
TATTCGTCTGACGTTGGATGGAGGCGAGTACCAAGGATTCGGTGATGTCA
TCTTGCTCTTCCGTAGGTGCTGGATAGCGGGATGTAGCATCACAAGCTGG
GTTGGTCTTTCCCGGGAGGTGAATGATCTTGAAATACCAAGGTAGTGTTC
TTTGCTTTAATCGAGCAAGTCTTGTATTTCTGATCTCGTCAAGCCTCTTG
TCACCGTATATCTTTACCAGAGGCTTATGATCGGTAATGACGGTCAAATC
GGGACAGCCGAGTGTGAAAAATTTACTTTGCTCTAGACCCCATGTAATGG
CAAGGGCCTCACCTTCAATCGCAACGTAATGTTTCTCAGACGGTTTGAGG
AATCGGGAACTAGCCAGCGTGATGCGCCAGCCACCGGGGCAACAGTCTGG
GTCGGTATCGTCACAGGAACAATGTTTCTGAAGTAAGAAGTATCCAATCC
CTTTCTTTGACCAGTCGGTGCGAAGACCAGTCGGGCGTCCAATGTCGAAG
ATTTCTACACCTTCCTTGATGGCATCGATGATTGCTCGTTTGGATGATTC
GAAAGCTGCATCAAGCTCTGCGTTCCATTCAAATGGTGTTCGTGGTGAGA
GGAACTTTCGAAATGGTTCCATAAGGTCTCGAAGCTGGGCGTAGTTGGAT
ACCTGATTCACCAGACCAAACCAACTTCGAATATCAGTCGTTGATGACGG
TGTTGGGAAATTACGAATAGCGTTGAAATACTTTGGGAGAGGTTCGACTC
TGTCTGGCGTAATGCGAAAGCCAGCGAAATCAACCTCTTTCTGTGCAAAT
TGGAATTTCTCAGGATTAACAACAACACCTGAGTTTCCAATAAGAGTCAA
TAAGTCAATAGTTCTCCACCAATGTTCATTTAAGTCAGTGTCATAGTGAA
GGGTGTCGTCAACAATACGTTCTTTGCGGTTAAAGTCTGTCAGGATGGTG
TCGAAACGTCGGTTGTAACCGTCACCTGAAGATAAGAAGCCTTGCGGTGC
ACGCTTGTAACGAAATCTACCGATTGGTGTTATAAATGTTGTCAAGTGGC
GATCAGATTTACGTAAAGGAAGGCTGTGATAGCCATTCCAAGCGTCTATT
ACAGTTTTCCAGGTATCACGAGGAACACGACGGACGATGTGGAATGGTTG
TTCGGGGTTGTGAGTCTCGCGTTTACAGAATTTGTTCAATGGAGACAAGT
CAACCGTTCTACGTGGAGAGCCATCATGCTTCCTTGCCACAACCATGTGA
TGACACCAATCGGATGGTTCCCCAAGCGGTACTGGTTCGATCACATTGAG
AGCAACATCACGGGCAATGTCGGCGTACACTTGATCTCTCCAGTGGATTG
GCACAGGTATCGCTTTGTGGTGGGCGACGGGGACAGCATCATCCTTGATG
TGAATCTCAACGGGTGGACCATCCATACGAGGAAGTTGTTGATGTGGGCA
TGTGTTGAATGTAGAGCTCCCATAGCGGTCAAGAAGCCAATCACGCATTC
GAGCACTGTTCTCGGGGGTGCAAGGGAAGGGTAATTCATCAGGACGGGGT
GGTGGTATAGTTCTTATCGGACAATCACATATGCCCCCATCATCGTTGGT
TGCACCACAGATGGATCCCACAGGCAGGGTTACGTTAGCCTGAGGGTCTG
CAGACACTTTCTTGTTCGAAATGTTGTTTTTGAACGATCCAATGGCTGGG
AAGTCTCGGTTTATTATACCCAGTTGAAGCATAGAGTCATACGACAAATA
TAAGCACTTAATGTCTCGACTAACATATATCATGGAACGACAAGATATCT
CATTTTGACTTCCCACTGCTGCACCTGTCATTTTGGCACGGAAAACTCCA
TTTATCTGAATGGGCGATTTGTTGGCAGCGTTCAGAGAGAGTGTAGCAGG
TGATAAGTCTGACATTTTGAATCCCGCTTTCAGAAAGTGTTCTAGGGACC
ATATGTCGGACTGAGCGCCAGTGTCAGCAACGGCTGTAACGTCAACGGGT
GTGGAGTTCTTTTTGTCAAGTGTAAGACGGAGGTTGACTGTTGGGTGGGA
TGACATACGAGCACGTCGCCATTCTCCTTTTGTGAAAATTTGATGCTCGA
GCGGTTTCGATGGTTGTGGACGTAAGTTGGCAGCAACATTTGAGGACTCG
GAGTGGGATATGGTTGAGATTTGGCCAAGTGAGTCGTAGCTACTGATGGC
ATTGGACTGGCTGGTTTGGTTCTGTTGGTTGTCTCTGTTCTTTCTCCAGC
ATTGTTCGCATCGAGTGTGGGGTTTACGGTTCCAACCTCTTGGTTTCTTC
TTGAATACGTTGAACACCTTGTGGCAATCTGGACAATTGGCAGTCTTCGA
TTTGTCAGCCTCACTCGGGGAGGGTACACGATTGCGGCGACGCGTGTCGG
TGCTTCGTTTCTGGTCATCTGGAAGATAGCCTCGTCGGTAAGCTGAAAGT
GCTGTCACCGAGGACATGGGATTTGCATTACGTGCTGTCTCTTTGTTCTC
AACAAAAGCGATCACGTCAGTTACAGGTTTAGTTTGTATATCATCAGCAC
TAAGAGCGTCACGCCGAATGTCAATGTCCGCGATGCCATTCAGGAGAACA
TCTCTGATTACTTCGTCGGTATAATAAACCTCTCCTTGATAAGCAGTATC
GCAGTTGCTACAAGAACCATCGTATAGTGTTTTAAATTCACATGTCTCTG
CTTTACCCTGAACCCTGGCAGCGAATGTTCGGAAGGGTTCGTCGGAACCT
TGGTGCATGGCCAACAGTTCTGATCGTACAACACCTAGCGCAACAGGAAT
AACTGCTAGCTTTTTCAATGTTTCAAGCGCTTCATCAAGGGCAAGCGTAG
TGAAGTTTGGTTTAGCTCTGAGCACAATATTTCCAAGCTGTTTCTCTGTG
CACTCAAAGAGCTGGCCAGACGCAACTACATCGGGTATTTGGGAACCGGT
ACGATAGGTCTGCCAACGTCGTGTGAATGCATTCCAATCCTCAGTTGTGG
CATTCATATGGAGCTTTGGACGTTCAAGCTTTGGGGCACGTACGACAGGT
GCGGCACGTGGCTGGGCAGCATTCATTGCGTGTATGGTGGTGTGCGCATT
CAGTAAGGCAGCAGAACCAATTACGTCTACGTCCTCAGTGGTGTAACCAC
AGTTTGGGATCGGGCAGGAAAGTACGACCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014378XLOC_014378Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025616-proteinTCONS_00025616-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025616-exon-sc0000540-1491911889:98722..102025TCONS_00025616-exon-sc0000540-1491911889:98722..102025Clytia hemisphaericaexon
TCONS_00025616-exon-sc0000540-1510915933:98722..102025TCONS_00025616-exon-sc0000540-1510915933:98722..102025Clytia hemisphaericaexon
TCONS_00025616-exon-sc0000540-1575043694:98722..102025TCONS_00025616-exon-sc0000540-1575043694:98722..102025Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000540supercontigsc0000540:98722..102025 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.229258 0.250994 0.558093 0.346405 1.39126 0.965019 1.3473 1.66943 1.21711 1.90243 1.88138 1.39259 2.58441 2.06258 1.85793 2.96134 1.25636 1.78164 1.58409 2.3207 1.35176 1.4509 0.884849 0.99177 2.2153 1.61463 1.30459 1.56801 0.64887 0.622208
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025616 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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