TCONS_00025591 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025591
Unique NameTCONS_00025591
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2028

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025591 ID=TCONS_00025591|Name=TCONS_00025591|organism=Clytia hemisphaerica|type=transcript|length=2028bp
TTATCTCATCATTGTTGGTGCGTTTGACAGaatgtcttgtaaaatattct
tattctAAAGCGACTAAACAGTGATTGTGAACAAAGATGGTGAGCTTCAA
GATTAACATTGCTTTCTTCCTGATGCTAAATTTGATGCTTGTGAATGCCA
AGGTTATTCGAGagcGTTTCTTGGCGACCTCCATCAACTGTGGAATGAAT
ACCAATGAAAATCAATTCTTTTCATCCATCAGAATCTCTGGCCATGAATA
CTCCAAGCAAAATGACGGTCTCAATGTTGTTGTTTATGATATTGGCAAGG
CGACTGTTGtccaatcaaaatcatttgctGACCCAAACACCCGAGAATTC
ATGCAATTTATACGAAATATAATGCCGGGTAAGCTGATCATCGGAACATC
TCAAATACTTTGTAGTGAAACGAGTGCAGTTGATTTCCAAAAACAGCAAT
CCATTTTATACGGACTGAGAAGATTGCGGATACACACGCGTGGACTGAAG
CCGCTTGTTTTCAGatcGGCTTTATTTGCATTTTGCAAAGAAGAATGTTA
CCCAAACATCACATCGAACGTTCCGTTACCTTACAATCAAGTGCACGATT
TTCGTCAGGGACCGATTCTTCTGTCGTTTCAAATCGAAAGAGAAGTGAta
gaagatgaaaagaaaaCTCTCTCGCCATCTTCAAGAAGATCAGCCAAGAG
GGCGGAACTAGATGATCAACATAGCTCACACGCAACTTTATACATAATTG
TCATCTCATGCGCACTTCTCATTGTGGCCACCATTATTGGTGTTGCCATA
GTTCTATACCGACGCTACAAAAAGGATCATGGGAAATTAGACTTAACATC
AGCCAATACCCAAGAGTCTTTTCGTGAACGACTTGGAAATACTAAAAGAC
GTTCATGCGAGTTATTGTTTCTGGCCAAGGAGAAGAGCGGGTGTTATAAA
CAACGTTATGAGCCGACGACGAGCGCGCGTTTGTTTTCGATACATTCGAA
TGATGGAGGAGAACAGTCTTGTACGGAAGTTGGTGATATGAATGGCTTTG
CATCCTATGTAAAGGTTGAAACAGAGGACCACCAGTTGATCTACAAAAGC
CCGTCGGGCGTTTCCAAACATGACGCCCCACAACACCCACCACCCACACT
CAGAAGACCACCATCAACAGTGAATTCACTCAATAAATCGAACACCGCAA
TGAACAATTCCAATGAATATCTGAATCCATACGATTATGCAGAGTCTGGT
CTGCGAAATACACAACACCGTTCCGTATACCAAGAAGTTGAACCTCCAGG
ATATTTTGAAGAATATACGTCACTTGAACCACGTGATGATGACGTAATAG
ATAATGATGTAATGCAAGATGGTGACCGAAGTAGTGTGGTCTTAAATGAA
CCAATTTATGATAATTATCAAAACGATTATATTGTACCGTATTCATGAAA
AAGGAATGGTGCAATACTCAATTCCCCTAGATCGCCCTTTTTATAATGCA
GATAACGCTCAAGAAAGGCCTGGGAAATAGCTGTGGAAAAACCGAAGATT
TTTTGGTTGTTTGATTTATATTGTCGACAATTTTTGCACCAACTTCCATC
AATGAAATAAAAAGGTGATGCAAGTGGTTCTGGATGCGAGATTGCGGGGG
AATATTGGTGTTTTTGTGATGTTCGAACCCGAGTAAATATGTATCTCAAG
AAAATTAGCAGCCAGCCAGAGCCAGAATTTTCATTTATCTATGGAGTTGA
AGATCCTGACTACCTGCCTACCATGAATTAATCAAATAGTCTTCGAGACG
AATTGATGAAAACtattttggatttccaaaattgaaaattattttttatg
aacCGAGTGACGCAGGAAGATATATAACTATTTGATGGGATAAACCTTTG
AGATATAGATTACAACCAACATTTGATGTTTTCGTGTATGCACGGGGAGA
ATTCTCaagaatttcttttaaattcatgaatgaaagaaaacataacagat
tttgaaaattttccctcGCCAGCAAAGG
Run BLAST on NCBI

protein sequence of TCONS_00025591-protein

>TCONS_00025591-protein ID=TCONS_00025591-protein|Name=TCONS_00025591-protein|organism=Clytia hemisphaerica|type=polypeptide|length=453bp
MVSFKINIAFFLMLNLMLVNAKVIRERFLATSINCGMNTNENQFFSSIRI
SGHEYSKQNDGLNVVVYDIGKATVVQSKSFADPNTREFMQFIRNIMPGKL
IIGTSQILCSETSAVDFQKQQSILYGLRRLRIHTRGLKPLVFRSALFAFC
KEECYPNITSNVPLPYNQVHDFRQGPILLSFQIEREVIEDEKKTLSPSSR
RSAKRAELDDQHSSHATLYIIVISCALLIVATIIGVAIVLYRRYKKDHGK
LDLTSANTQESFRERLGNTKRRSCELLFLAKEKSGCYKQRYEPTTSARLF
SIHSNDGGEQSCTEVGDMNGFASYVKVETEDHQLIYKSPSGVSKHDAPQH
PPPTLRRPPSTVNSLNKSNTAMNNSNEYLNPYDYAESGLRNTQHRSVYQE
VEPPGYFEEYTSLEPRDDDVIDNDVMQDGDRSSVVLNEPIYDNYQNDYIV
PYS
Run BLAST on NCBI

transcript from alignment at sc0000540:73125..80788+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025591 ID=TCONS_00025591|Name=TCONS_00025591|organism=Clytia hemisphaerica|type=transcript|length=7664bp|location=Sequence derived from alignment at sc0000540:73125..80788+ (Clytia hemisphaerica)
TTATCTCATCATTGTTGGTGCGTTTGACAGGTATTCACATCAATCTGTCT
TCATTAAGGACGGGCAAAAGTCTGTTTTAGGGTAATATTGGGGTCAGGTT
TTTCGATTTATAATCAGTTATTTTGCATCAGTATTTCATTCCAATTTACA
CTCACAATATGGTATTTTTTCTACATTTTGGTAGAATGTTTCGTACCTCT
TCATATCCGGAAGCTTTTGCGGTTTACCAAAGTTTGGTTTGCCAAAGATG
AACACCGATTTCCTATCCGATGAGAAACTTACTACATAGGAAGCGGTAAc
agatatttgtttttcatttcagaatgtcttgtaaaatattcttattctAA
AGCGACTAAACAGTGATTGTGAACAAAGATGGTGAGCTTCAAGATTAACA
TTGCTTTCTTCCTGATGCTAAATTTGATGCTTGTGAATGCCAAGGTTATT
CGAGGTAAGCTTCTTATTGATCTTCGGTTCTACAATTGGGCAATTTAAAC
TATTTAAGATAGATATCGTCTTTACCAGACCAAATCTATGCAATATTTTT
ATCAGAATTGATTGTACCAGGACCTTCAAACTTGCGATACACACTGGTAC
AGATAGTATTGAGAATACACCTAAAATCTAAAGAATGATAAATGCAGAAC
CTAATATTTCTAGGTGttatcaaatttaaaacaaattatttttttcagag
cGTTTCTTGGCGACCTCCATCAACTGTGGAATGAATACCAATGAAAATCA
ATTCTTTTCATCCATCAGAATCTCTGGCCATGAATACTCCAAGCAAAATG
ACGGTgagtttatttttctcaaaatctttatATATTTACTATAcaccagt
aatctaggacttgtCTTTTGACTGGGTCAATTTTCGGATCTATTTTCGGA
AAGAagcacacatttttttataagaacatctattTGGACCTTCGAATGTT
CTTCACTTTTCGAGTttcaagcataaaattgttcttattttcactatttt
tagagcattcttgccaattttcctaagaaattggatcttttagagtctac
aaagctttaaaatgttctaaacttgctcttgatattttggccatcgaagc
ctcgtgtgttcttataaagtttgctcttataaaaacgtgtagaatTTGAA
CCTGGGGAGACAATGGTTTGTGGGGTTTGTGGTCATCTCTGATTCATCTT
TGCTTAGTCATCGTGCTCAGTGCGTTTGGACTTGGttcaagaatttcaat
tttaaagggAATAATATTAGCTGTTCACAGAAAGGgaccttttcttcttc
tttttatcATCATGAAACTTACACCTCATATTCAGGTCTCAATGTTGTTG
TTTATGATATTGGCAAGGCGACTGTTGtccaatcaaaatcatttgctGAC
CCAAACACCCGAGAATTCATGCAATTTATACGAAATATAATGCCGGGTAA
GCTGATCATCGGAACATCTCAAATACTTTGTAGTGAAACGAGTGCAGTTG
ATTTCCAAAAACAGCAATCCATTTTATACGGACTGAGAAGATTGCGGATA
CACACGCGTGGACTGAAGCCGCTTGTTTTCAGGTAAGTCATTTGTCAAAA
AGTCAATTCGCTcctttatgattctgatagagCATACATAGACTCTGGGC
GACAGATTGGAATAAGAATAGTGTATTCTTTTCAACGTCAGTCATTGACT
TTGAATAAATACAATAGAATTTTAAGGGGAAAAGGAAAAATGGCAACCTT
AGATATGAAAGATTGGTGTTTTTAACTGACAACAATTTATGGCTTCCGCT
ATTGGAAACCCCATTTATTTTAGAGGTCGATAGTTTTTAGAGTAcatctc
tttttttataagaaccagtcgATTTTTGGTGAGGctcagctgttcttatt
ttttttggcacttagagtctcaaattgttcttatcctgttcttatttata
gggtatATTAACGTATTTCAGGCTTTGTACCCAATTTTTCCTACTTTGac
accaaaatttctttaaatttagtaattccaggctcagcattgttcttaag
ttaaattgttcttattttttgtaaatttgagcCTCATTGCTCATATAAAC
TCTTCTTAGGAAAGAAAAAGAGTGTAGCTGAAAGACTCTAAGTCTATTGA
AGCTAGAATCATAATCTAGATTGATAGCATTCATAAAACTCAATGAtggt
tgaaatatttttcagatcGGCTTTATTTGCATTTTGCAAAGAAGAATGTT
ACCCAAACATCACATCGAACGTTCCGTTACCTTACAATCAAGTGCACGAT
TTTCGTCAGGGACCGATTCTTCTGTCGTTTCAAATCGAAAGAGAAGTGAt
agaagatgaaaagaaaagtgaGATGAAATGtgtttttagacattttaaat
CTCTACATGATTCAAACCACAGTCATAGATGGGATTTTAGAtctaataca
ctcttctcgagatgcataaatttattgttgtcctcgttttcaaacagatt
ttattgctatgaaattatacatttaaaccaatttaaattcccaaaaggca
aacattaactctaaaataaaagtacttgaaattcaaaatgtctcatgagg
tgtaaacaacacaattatcatagtgaatatgtaattttatagcaatgaaa
tctgtttgaaaacgaggacaacaataaatttatgcatctcgagaagagtg
tattgataNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNccaaaatttttttaaattaaac
aaacggggggggggaggtCGGAAATTACGTACCTCTAAAAACCGCAAAAT
CAAGTAATTTTATTACCAGAAGCAAGCTGTTGAGACTATTTCAGCTTTTA
ATAGAGAGGGGGGTTCGAATAAGAACGGGGTGATTCGAAAGGGTGGGGAT
GTTTATTCAGGAAATTAGagtatatattttcaaattcacGGGCGATAAGA
TTCTTACACGCATAAAAGCTTTCAATATACTCGAGTATGcgaattaaatt
aaattacaTAATAGGATCTGCTCGAATATGAACTACTTTGTTTTACGGTG
TAATTTCTATTTGATAACTTGtatttgttgtaaaatttttccAGCTCTCT
CGCCATCTTCAAGAAGATCAGCCAAGAGGGCGGAACTAGATGATCAACAT
AGCTCACACGCAACTTTATACATAATTGTCATCTCATGCGCACTTCTCAT
TGTGGCCACCATTATTGGTGTTGCCATAGTTCTATACCGACGCTACAAAA
AGGATCATGGGAAATTAGACTTAACATCAGCCAATACCCAAGAGTCTTTT
CGTGAACGACTTGGAAATACTAAAAGACGTTCATGCGAGTTATTGTTTCT
GGCCAAGGAGAAGAGCGGGTGTTATAAACAACGTTATGAGCCGACGACGA
GCGCGCGTTTGTTTTCGATACATTCGAATGATGGAGGAGAACAGTCTTGT
ACGGAAGTTGGTGATATGAATGGCTTTGCATCCTATGTAAAGGTGAGGCA
TGAAATAGTATACTTGGGCACCCTAAAAACGTTCAAAAAATGCTAGCTTT
ACGTCCATTGTGTCTATATGACCTTGCAGCAACTTAAACGTCGTACAGCa
gtctccgtaactcgaacacacttgaggaacacaaatttgttcgagctaAA
GAGGGTTTCCTGTTATAGAGGTttaagttaaagagactcccAAGAGACTA
CACTGTAACATCTTCTCATCTTCGCAGCACTTTTAACTAAATTTAAGAAT
AGGTGAAAAAGCATACCACCTCGACGACTTTCTCAACCGTTGAACTAGCT
GATTAACTTCTTTTATACTATTTTGCAAAGATTTCGACAAAATAGAAACT
GGTTGACTCAGCAGACTCTCTTTAATTCTATTTAGAAGGGACCAAGACTA
TTTTTCCAATTAGAAAGTTTCAAATTATGGAGAGCACTTCATACGATTAT
ATAAGACGTAGTGATGTAGTGGTCATTGCTTTTGACTCCCGTCTGGGAGT
TCTGAGTTCAATTCCTACCGTAGTACTATGGTTCACTTGGCAACAGATCT
TCTTCCAGAttaacccataccatgtgaggggaatcgGGTACCACTACTCA
TCTGTCATGTATCATTCATCCCGTTCTACGCCTGTGACATGCTATATACT
CTCCTGCGTAGTGCGAGTGTCATTACTATGCATCATGCCTGGTATATGTG
TCTCGCATGCACCTACTTCATAACGAGTAGCAGGACCCATTCCCCAAGAG
AGCTCATACCATCACTTTATACGATTTCCCGCTgagcaacggattagaat
aggtggattaacctttagacaccgctgtttttaaaaacactgcgtgctgc
tgccgctgtttttttcatgaaaatggaggtttcgcggcaaatgtcataaa
atctgaaccgctaaagcttaagtaaaaagtaaacccattttgaaaagcta
aggatctattttttcagataataccaaaaagacgcctcatcaccctttta
aacctgactacacagcctccaatcaaaacagtaaaaattccatgtttacg
attttttcactttttttcttttttttgacaaattgaatgaaaaaagtggg
tacaaggtaaagattggtcccacaaaaatttttttattttagtttatgTT
ATAAGCCACCATTCTGTGAAATTTCAGGGCTGAAGAAGCTCATTTCATCT
CAGAATCTAAGTTTCGGTAAAGCACACTTTTCCACCAAAATCGACACTCT
GGCCACAACAGATAAATTAAGTTGTCCCGTTGCTCCAAAATTGGCCCTGC
ACTTACCCTAAGCCTGTAAAATTACTACAATAATCATAACAGACTCTCTA
TCATGTAAATTCAAGCAATAAAACACCAGAATAGTGGAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNcaacttatcaagttttaattgctag
caaactcgtaaaaaagtttgataacctaacgaggagtgttttctatgagt
tcttaatccacctattctaatccgttgcgCTGAGGGAGCAAATATTCTAG
TTTGATTTACAAGATTGATTCGAATTGTAGAGGTTATTAGATTTAAAGAG
TTGACAGAGATCCAACTTATTGACTTAAAATTGAACAATCAAGTAACAAC
ATTTTATTCCAGGTTGAAACAGAGGACCACCAGTTGATCTACAAAAGCCC
GTCGGGCGTTTCCAAACATGACGCCCCACAACACCCACCACCCACACTCA
GAAGACCACCATCAACAGTGAATTCACTCAATAAATCGAACACCGCAATG
AACAATTCCAATGAATATCTGAATCCATACGATTATGCAGAGTCTGGTCT
GCGAAATACACAACACCGTTCCGTATACCAAGAAGGTAAGATATTATTGC
TCAACTAACTGATATCAGAATATACACTCCTGTCTCCTTTGACCTGGTGT
AAAGTTGACCGCTAGTTGGGATGGAGAAAAAGTGACGGCACCATACCACG
AGAATGCCGATAGGGTAAAAACCTGTTCGAATTTGTAAAAGGCTTAGAAA
TAGAGATGGTTAATAAACTTTCCATCCGAGAACAGTTTTGAGCACTCTTT
TTCAGTAGGTAGGGGTAAAGACGAAAAGGTAACGGTGGTGGGCATAGGAT
TACAAGAAATAAACTCCAAATGGAAAGAAAAGTCTGGAAACTCTCAAAAG
AGAAGCATGCGGTGTGCAAATTCTACTCGCTGACGCAAATCGGAATGGGT
GTTAAATTTATCTTAACCGCAGTTATGGGGGTTATGTGATCGATTACATT
TAGTTATATCCAATGAAAGGCTTGTTTGATCCGTTTTTTTGTCatgagag
aatttttttcttctattttttagTTGAACCTCCAGGATATTTTGAAGAAT
ATACGTCACTTGAACCACGTGATGATGACGTAATAGATAATGATGTAATG
CAAGATGGTGACCGAAGTAGTGTGGTCTTAAATGAACCAATTTATGATAA
TTATCAAAACGATTATATTGTACCGTATTCATGAAAAAGGAATGGTGCAA
TACTCAATTCCCCTAGATCGCCCTTTTTATAATGCAGATAACGCTCAAGA
AAGGCCTGGGAAATAGCTGTGGAAAAACCGAAGATTTTTTGGTTGTTTGA
TTTATATTGTCGACAATTTTTGCACCAACTTCCATCAATGAAATAAAAAG
GTGATGCAAGTGGTTCTGGATGCGAGATTGCGGGGGAATATTGGTGTTTT
TGTGATGTTCGAACCCGAGTAAATATGTATCTCAAGAAAATTAGCAGCCA
GCCAGAGCCAGAATTTTCATTTATCTATGGAGTTGAAGATCCTGACTACC
TGCCTACCATGAATTAATCAAATAGTCTTCGAGACGAATTGATGAAAACt
attttggatttccaaaattgaaaattattttttatgaacCGAGTGACGCA
GGAAGATATATAACTATTTGATGGGATAAACCTTTGAGATATAGATTACA
ACCAACATTTGATGTTTTCGTGTATGCACGGGGAGAATTCTCaagaattt
cttttaaattcatgaatgaaagaaaacataacagattttgaaaattttcc
ctcGCCAGCAAAGG

Coding sequence (CDS) from alignment at sc0000540:73125..80788+

>TCONS_00025591 ID=TCONS_00025591|Name=TCONS_00025591|organism=Clytia hemisphaerica|type=CDS|length=9534bp|location=Sequence derived from alignment at sc0000540:73125..80788+ (Clytia hemisphaerica)
ATGGTGAGCTTCAAGATTAACATTGCTTTCTTCCTGATGCTAAATTTGAT
GCTTGTGAATGCCAAGGTTATTCGAGagcGTTTCTTGGCGACCTCCATCA
ACTGTGGAATGAATACCAATGAAAATCAATTCTTTTCATCCATCAGAATC
TCTGGCCATGAATACTCCAAGCAAAATGACGGTCTCAATGTTGTTGTTTA
TGATATTGGCAAGGCGACTGTTGtccaatcaaaatcatttgctGACCCAA
ACACCCGAGAATTCATGCAATTTATACGAAATATAATGCCGGGTAAGCTG
ATCATCGGAACATCTCAAATACTTTGTAGTGAAACGAGTGCAGTTGATTT
CCAAAAACAGCAATCCATTTTATACGGACTGAGAAGATTGCGGATACACA
CGCGTGGACTGAAGCCGCTTGTTTTCAGatcGGCTTTATTTGCATTTTGC
AAAGAAGAATGTTACCCAAACATCACATCGAACGTTCCGTTACCTTACAA
TCAAGTGCACGATTTTCGTCAGGGACCGATTCTTCTGTCGTTTCAAATCG
AAAGAGAAGTGAtagaagatgaaaagaaaaCTCTCTCGCCATCTTCAAGA
AGATCAGCCAAGAGGGCGGAACTAGATGATCAACATAGCTCACACGCAAC
TTTATACATAATTGTCATCTCATGCGCACTTCTCATTGTGGCCACCATTA
TTGGTGTTGCCATAGTTCTATACCGACGCTACAAAAAGGATCATGGGAAA
TTAGACTTAACATCAGCCAATACCCAAGAGTCTTTTCGTGAACGACTTGG
AAATACTAAAAGACGTTCATGCGAGTTATTGTTTCTGGCCAAGGAGAAGA
GCGGGTGTTATAAACAACGTTATGAGCCGACGACGAGCGCGCGTTTGTTT
TCGATACATTCGAATGATGGAGGAGAACAGTCTTGTACGGAAGTTGGTGA
TATGAATGGCTTTGCATCCTATGTAAAGGTTGAAACAGAGGACCACCAGT
TGATCTACAAAAGCCCGTCGGGCGTTTCCAAACATGACGCCCCACAACAC
CCACCACCCACACTCAGAAGACCACCATCAACAGTGAATTCACTCAATAA
ATCGAACACCGCAATGAACAATTCCAATGAATATCTGAATCCATACGATT
ATGCAGAGTCTGGTCTGCGAAATACACAACACCGTTCCGTATACCAAGAA
GTTGAACCTCCAGGATATTTTGAAGAATATACGTCACTTGAACCACGTGA
TGATGACGTAATAGATAATGATGTAATGCAAGATGGTGACCGAAGTAGTG
TGGTCTTAAATGAACCAATTTATGATAATTATCAAAACGATTATATTGTA
CCGTATTCATGAATGGTGAGCTTCAAGATTAACATTGCTTTCTTCCTGAT
GCTAAATTTGATGCTTGTGAATGCCAAGGTTATTCGAGagcGTTTCTTGG
CGACCTCCATCAACTGTGGAATGAATACCAATGAAAATCAATTCTTTTCA
TCCATCAGAATCTCTGGCCATGAATACTCCAAGCAAAATGACGGTCTCAA
TGTTGTTGTTTATGATATTGGCAAGGCGACTGTTGtccaatcaaaatcat
ttgctGACCCAAACACCCGAGAATTCATGCAATTTATACGAAATATAATG
CCGGGTAAGCTGATCATCGGAACATCTCAAATACTTTGTAGTGAAACGAG
TGCAGTTGATTTCCAAAAACAGCAATCCATTTTATACGGACTGAGAAGAT
TGCGGATACACACGCGTGGACTGAAGCCGCTTGTTTTCAGatcGGCTTTA
TTTGCATTTTGCAAAGAAGAATGTTACCCAAACATCACATCGAACGTTCC
GTTACCTTACAATCAAGTGCACGATTTTCGTCAGGGACCGATTCTTCTGT
CGTTTCAAATCGAAAGAGAAGTGAtagaagatgaaaagaaaaCTCTCTCG
CCATCTTCAAGAAGATCAGCCAAGAGGGCGGAACTAGATGATCAACATAG
CTCACACGCAACTTTATACATAATTGTCATCTCATGCGCACTTCTCATTG
TGGCCACCATTATTGGTGTTGCCATAGTTCTATACCGACGCTACAAAAAG
GATCATGGGAAATTAGACTTAACATCAGCCAATACCCAAGAGTCTTTTCG
TGAACGACTTGGAAATACTAAAAGACGTTCATGCGAGTTATTGTTTCTGG
CCAAGGAGAAGAGCGGGTGTTATAAACAACGTTATGAGCCGACGACGAGC
GCGCGTTTGTTTTCGATACATTCGAATGATGGAGGAGAACAGTCTTGTAC
GGAAGTTGGTGATATGAATGGCTTTGCATCCTATGTAAAGGTTGAAACAG
AGGACCACCAGTTGATCTACAAAAGCCCGTCGGGCGTTTCCAAACATGAC
GCCCCACAACACCCACCACCCACACTCAGAAGACCACCATCAACAGTGAA
TTCACTCAATAAATCGAACACCGCAATGAACAATTCCAATGAATATCTGA
ATCCATACGATTATGCAGAGTCTGGTCTGCGAAATACACAACACCGTTCC
GTATACCAAGAAGTTGAACCTCCAGGATATTTTGAAGAATATACGTCACT
TGAACCACGTGATGATGACGTAATAGATAATGATGTAATGCAAGATGGTG
ACCGAAGTAGTGTGGTCTTAAATGAACCAATTTATGATAATTATCAAAAC
GATTATATTGTACCGTATTCATGAATGGTGAGCTTCAAGATTAACATTGC
TTTCTTCCTGATGCTAAATTTGATGCTTGTGAATGCCAAGGTTATTCGAG
agcGTTTCTTGGCGACCTCCATCAACTGTGGAATGAATACCAATGAAAAT
CAATTCTTTTCATCCATCAGAATCTCTGGCCATGAATACTCCAAGCAAAA
TGACGGTCTCAATGTTGTTGTTTATGATATTGGCAAGGCGACTGTTGtcc
aatcaaaatcatttgctGACCCAAACACCCGAGAATTCATGCAATTTATA
CGAAATATAATGCCGGGTAAGCTGATCATCGGAACATCTCAAATACTTTG
TAGTGAAACGAGTGCAGTTGATTTCCAAAAACAGCAATCCATTTTATACG
GACTGAGAAGATTGCGGATACACACGCGTGGACTGAAGCCGCTTGTTTTC
AGatcGGCTTTATTTGCATTTTGCAAAGAAGAATGTTACCCAAACATCAC
ATCGAACGTTCCGTTACCTTACAATCAAGTGCACGATTTTCGTCAGGGAC
CGATTCTTCTGTCGTTTCAAATCGAAAGAGAAGTGAtagaagatgaaaag
aaaaCTCTCTCGCCATCTTCAAGAAGATCAGCCAAGAGGGCGGAACTAGA
TGATCAACATAGCTCACACGCAACTTTATACATAATTGTCATCTCATGCG
CACTTCTCATTGTGGCCACCATTATTGGTGTTGCCATAGTTCTATACCGA
CGCTACAAAAAGGATCATGGGAAATTAGACTTAACATCAGCCAATACCCA
AGAGTCTTTTCGTGAACGACTTGGAAATACTAAAAGACGTTCATGCGAGT
TATTGTTTCTGGCCAAGGAGAAGAGCGGGTGTTATAAACAACGTTATGAG
CCGACGACGAGCGCGCGTTTGTTTTCGATACATTCGAATGATGGAGGAGA
ACAGTCTTGTACGGAAGTTGGTGATATGAATGGCTTTGCATCCTATGTAA
AGGTTGAAACAGAGGACCACCAGTTGATCTACAAAAGCCCGTCGGGCGTT
TCCAAACATGACGCCCCACAACACCCACCACCCACACTCAGAAGACCACC
ATCAACAGTGAATTCACTCAATAAATCGAACACCGCAATGAACAATTCCA
ATGAATATCTGAATCCATACGATTATGCAGAGTCTGGTCTGCGAAATACA
CAACACCGTTCCGTATACCAAGAAGTTGAACCTCCAGGATATTTTGAAGA
ATATACGTCACTTGAACCACGTGATGATGACGTAATAGATAATGATGTAA
TGCAAGATGGTGACCGAAGTAGTGTGGTCTTAAATGAACCAATTTATGAT
AATTATCAAAACGATTATATTGTACCGTATTCATGAATGGTGAGCTTCAA
GATTAACATTGCTTTCTTCCTGATGCTAAATTTGATGCTTGTGAATGCCA
AGGTTATTCGAGagcGTTTCTTGGCGACCTCCATCAACTGTGGAATGAAT
ACCAATGAAAATCAATTCTTTTCATCCATCAGAATCTCTGGCCATGAATA
CTCCAAGCAAAATGACGGTCTCAATGTTGTTGTTTATGATATTGGCAAGG
CGACTGTTGtccaatcaaaatcatttgctGACCCAAACACCCGAGAATTC
ATGCAATTTATACGAAATATAATGCCGGGTAAGCTGATCATCGGAACATC
TCAAATACTTTGTAGTGAAACGAGTGCAGTTGATTTCCAAAAACAGCAAT
CCATTTTATACGGACTGAGAAGATTGCGGATACACACGCGTGGACTGAAG
CCGCTTGTTTTCAGatcGGCTTTATTTGCATTTTGCAAAGAAGAATGTTA
CCCAAACATCACATCGAACGTTCCGTTACCTTACAATCAAGTGCACGATT
TTCGTCAGGGACCGATTCTTCTGTCGTTTCAAATCGAAAGAGAAGTGAta
gaagatgaaaagaaaaCTCTCTCGCCATCTTCAAGAAGATCAGCCAAGAG
GGCGGAACTAGATGATCAACATAGCTCACACGCAACTTTATACATAATTG
TCATCTCATGCGCACTTCTCATTGTGGCCACCATTATTGGTGTTGCCATA
GTTCTATACCGACGCTACAAAAAGGATCATGGGAAATTAGACTTAACATC
AGCCAATACCCAAGAGTCTTTTCGTGAACGACTTGGAAATACTAAAAGAC
GTTCATGCGAGTTATTGTTTCTGGCCAAGGAGAAGAGCGGGTGTTATAAA
CAACGTTATGAGCCGACGACGAGCGCGCGTTTGTTTTCGATACATTCGAA
TGATGGAGGAGAACAGTCTTGTACGGAAGTTGGTGATATGAATGGCTTTG
CATCCTATGTAAAGGTTGAAACAGAGGACCACCAGTTGATCTACAAAAGC
CCGTCGGGCGTTTCCAAACATGACGCCCCACAACACCCACCACCCACACT
CAGAAGACCACCATCAACAGTGAATTCACTCAATAAATCGAACACCGCAA
TGAACAATTCCAATGAATATCTGAATCCATACGATTATGCAGAGTCTGGT
CTGCGAAATACACAACACCGTTCCGTATACCAAGAAGTTGAACCTCCAGG
ATATTTTGAAGAATATACGTCACTTGAACCACGTGATGATGACGTAATAG
ATAATGATGTAATGCAAGATGGTGACCGAAGTAGTGTGGTCTTAAATGAA
CCAATTTATGATAATTATCAAAACGATTATATTGTACCGTATTCATGAAT
GGTGAGCTTCAAGATTAACATTGCTTTCTTCCTGATGCTAAATTTGATGC
TTGTGAATGCCAAGGTTATTCGAGagcGTTTCTTGGCGACCTCCATCAAC
TGTGGAATGAATACCAATGAAAATCAATTCTTTTCATCCATCAGAATCTC
TGGCCATGAATACTCCAAGCAAAATGACGGTCTCAATGTTGTTGTTTATG
ATATTGGCAAGGCGACTGTTGtccaatcaaaatcatttgctGACCCAAAC
ACCCGAGAATTCATGCAATTTATACGAAATATAATGCCGGGTAAGCTGAT
CATCGGAACATCTCAAATACTTTGTAGTGAAACGAGTGCAGTTGATTTCC
AAAAACAGCAATCCATTTTATACGGACTGAGAAGATTGCGGATACACACG
CGTGGACTGAAGCCGCTTGTTTTCAGatcGGCTTTATTTGCATTTTGCAA
AGAAGAATGTTACCCAAACATCACATCGAACGTTCCGTTACCTTACAATC
AAGTGCACGATTTTCGTCAGGGACCGATTCTTCTGTCGTTTCAAATCGAA
AGAGAAGTGAtagaagatgaaaagaaaaCTCTCTCGCCATCTTCAAGAAG
ATCAGCCAAGAGGGCGGAACTAGATGATCAACATAGCTCACACGCAACTT
TATACATAATTGTCATCTCATGCGCACTTCTCATTGTGGCCACCATTATT
GGTGTTGCCATAGTTCTATACCGACGCTACAAAAAGGATCATGGGAAATT
AGACTTAACATCAGCCAATACCCAAGAGTCTTTTCGTGAACGACTTGGAA
ATACTAAAAGACGTTCATGCGAGTTATTGTTTCTGGCCAAGGAGAAGAGC
GGGTGTTATAAACAACGTTATGAGCCGACGACGAGCGCGCGTTTGTTTTC
GATACATTCGAATGATGGAGGAGAACAGTCTTGTACGGAAGTTGGTGATA
TGAATGGCTTTGCATCCTATGTAAAGGTTGAAACAGAGGACCACCAGTTG
ATCTACAAAAGCCCGTCGGGCGTTTCCAAACATGACGCCCCACAACACCC
ACCACCCACACTCAGAAGACCACCATCAACAGTGAATTCACTCAATAAAT
CGAACACCGCAATGAACAATTCCAATGAATATCTGAATCCATACGATTAT
GCAGAGTCTGGTCTGCGAAATACACAACACCGTTCCGTATACCAAGAAGT
TGAACCTCCAGGATATTTTGAAGAATATACGTCACTTGAACCACGTGATG
ATGACGTAATAGATAATGATGTAATGCAAGATGGTGACCGAAGTAGTGTG
GTCTTAAATGAACCAATTTATGATAATTATCAAAACGATTATATTGTACC
GTATTCATGAATGGTGAGCTTCAAGATTAACATTGCTTTCTTCCTGATGC
TAAATTTGATGCTTGTGAATGCCAAGGTTATTCGAGagcGTTTCTTGGCG
ACCTCCATCAACTGTGGAATGAATACCAATGAAAATCAATTCTTTTCATC
CATCAGAATCTCTGGCCATGAATACTCCAAGCAAAATGACGGTCTCAATG
TTGTTGTTTATGATATTGGCAAGGCGACTGTTGtccaatcaaaatcattt
gctGACCCAAACACCCGAGAATTCATGCAATTTATACGAAATATAATGCC
GGGTAAGCTGATCATCGGAACATCTCAAATACTTTGTAGTGAAACGAGTG
CAGTTGATTTCCAAAAACAGCAATCCATTTTATACGGACTGAGAAGATTG
CGGATACACACGCGTGGACTGAAGCCGCTTGTTTTCAGatcGGCTTTATT
TGCATTTTGCAAAGAAGAATGTTACCCAAACATCACATCGAACGTTCCGT
TACCTTACAATCAAGTGCACGATTTTCGTCAGGGACCGATTCTTCTGTCG
TTTCAAATCGAAAGAGAAGTGAtagaagatgaaaagaaaaCTCTCTCGCC
ATCTTCAAGAAGATCAGCCAAGAGGGCGGAACTAGATGATCAACATAGCT
CACACGCAACTTTATACATAATTGTCATCTCATGCGCACTTCTCATTGTG
GCCACCATTATTGGTGTTGCCATAGTTCTATACCGACGCTACAAAAAGGA
TCATGGGAAATTAGACTTAACATCAGCCAATACCCAAGAGTCTTTTCGTG
AACGACTTGGAAATACTAAAAGACGTTCATGCGAGTTATTGTTTCTGGCC
AAGGAGAAGAGCGGGTGTTATAAACAACGTTATGAGCCGACGACGAGCGC
GCGTTTGTTTTCGATACATTCGAATGATGGAGGAGAACAGTCTTGTACGG
AAGTTGGTGATATGAATGGCTTTGCATCCTATGTAAAGGTTGAAACAGAG
GACCACCAGTTGATCTACAAAAGCCCGTCGGGCGTTTCCAAACATGACGC
CCCACAACACCCACCACCCACACTCAGAAGACCACCATCAACAGTGAATT
CACTCAATAAATCGAACACCGCAATGAACAATTCCAATGAATATCTGAAT
CCATACGATTATGCAGAGTCTGGTCTGCGAAATACACAACACCGTTCCGT
ATACCAAGAAGTTGAACCTCCAGGATATTTTGAAGAATATACGTCACTTG
AACCACGTGATGATGACGTAATAGATAATGATGTAATGCAAGATGGTGAC
CGAAGTAGTGTGGTCTTAAATGAACCAATTTATGATAATTATCAAAACGA
TTATATTGTACCGTATTCATGAATGGTGAGCTTCAAGATTAACATTGCTT
TCTTCCTGATGCTAAATTTGATGCTTGTGAATGCCAAGGTTATTCGAGag
cGTTTCTTGGCGACCTCCATCAACTGTGGAATGAATACCAATGAAAATCA
ATTCTTTTCATCCATCAGAATCTCTGGCCATGAATACTCCAAGCAAAATG
ACGGTCTCAATGTTGTTGTTTATGATATTGGCAAGGCGACTGTTGtccaa
tcaaaatcatttgctGACCCAAACACCCGAGAATTCATGCAATTTATACG
AAATATAATGCCGGGTAAGCTGATCATCGGAACATCTCAAATACTTTGTA
GTGAAACGAGTGCAGTTGATTTCCAAAAACAGCAATCCATTTTATACGGA
CTGAGAAGATTGCGGATACACACGCGTGGACTGAAGCCGCTTGTTTTCAG
atcGGCTTTATTTGCATTTTGCAAAGAAGAATGTTACCCAAACATCACAT
CGAACGTTCCGTTACCTTACAATCAAGTGCACGATTTTCGTCAGGGACCG
ATTCTTCTGTCGTTTCAAATCGAAAGAGAAGTGAtagaagatgaaaagaa
aaCTCTCTCGCCATCTTCAAGAAGATCAGCCAAGAGGGCGGAACTAGATG
ATCAACATAGCTCACACGCAACTTTATACATAATTGTCATCTCATGCGCA
CTTCTCATTGTGGCCACCATTATTGGTGTTGCCATAGTTCTATACCGACG
CTACAAAAAGGATCATGGGAAATTAGACTTAACATCAGCCAATACCCAAG
AGTCTTTTCGTGAACGACTTGGAAATACTAAAAGACGTTCATGCGAGTTA
TTGTTTCTGGCCAAGGAGAAGAGCGGGTGTTATAAACAACGTTATGAGCC
GACGACGAGCGCGCGTTTGTTTTCGATACATTCGAATGATGGAGGAGAAC
AGTCTTGTACGGAAGTTGGTGATATGAATGGCTTTGCATCCTATGTAAAG
GTTGAAACAGAGGACCACCAGTTGATCTACAAAAGCCCGTCGGGCGTTTC
CAAACATGACGCCCCACAACACCCACCACCCACACTCAGAAGACCACCAT
CAACAGTGAATTCACTCAATAAATCGAACACCGCAATGAACAATTCCAAT
GAATATCTGAATCCATACGATTATGCAGAGTCTGGTCTGCGAAATACACA
ACACCGTTCCGTATACCAAGAAGTTGAACCTCCAGGATATTTTGAAGAAT
ATACGTCACTTGAACCACGTGATGATGACGTAATAGATAATGATGTAATG
CAAGATGGTGACCGAAGTAGTGTGGTCTTAAATGAACCAATTTATGATAA
TTATCAAAACGATTATATTGTACCGTATTCATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014360XLOC_014360Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025591-proteinTCONS_00025591-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025591-exon-sc0000540-1491911889:73125..73154TCONS_00025591-exon-sc0000540-1491911889:73125..73154Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:73125..73154TCONS_00025591-exon-sc0000540-1510915933:73125..73154Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:73125..73154TCONS_00025591-exon-sc0000540-1575043694:73125..73154Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:73447..73578TCONS_00025591-exon-sc0000540-1491911889:73447..73578Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:73447..73578TCONS_00025591-exon-sc0000540-1510915933:73447..73578Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:73447..73578TCONS_00025591-exon-sc0000540-1575043694:73447..73578Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:73823..73927TCONS_00025591-exon-sc0000540-1491911889:73823..73927Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:73823..73927TCONS_00025591-exon-sc0000540-1510915933:73823..73927Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:73823..73927TCONS_00025591-exon-sc0000540-1575043694:73823..73927Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:74460..74706TCONS_00025591-exon-sc0000540-1491911889:74460..74706Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:74460..74706TCONS_00025591-exon-sc0000540-1510915933:74460..74706Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:74460..74706TCONS_00025591-exon-sc0000540-1575043694:74460..74706Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:75340..75491TCONS_00025591-exon-sc0000540-1491911889:75340..75491Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:75340..75491TCONS_00025591-exon-sc0000540-1510915933:75340..75491Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:75340..75491TCONS_00025591-exon-sc0000540-1575043694:75340..75491Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:76369..76766TCONS_00025591-exon-sc0000540-1491911889:76369..76766Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:76369..76766TCONS_00025591-exon-sc0000540-1510915933:76369..76766Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:76369..76766TCONS_00025591-exon-sc0000540-1575043694:76369..76766Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:79337..79559TCONS_00025591-exon-sc0000540-1491911889:79337..79559Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:79337..79559TCONS_00025591-exon-sc0000540-1510915933:79337..79559Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:79337..79559TCONS_00025591-exon-sc0000540-1575043694:79337..79559Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1491911889:80048..80788TCONS_00025591-exon-sc0000540-1491911889:80048..80788Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1510915933:80048..80788TCONS_00025591-exon-sc0000540-1510915933:80048..80788Clytia hemisphaericaexon
TCONS_00025591-exon-sc0000540-1575043694:80048..80788TCONS_00025591-exon-sc0000540-1575043694:80048..80788Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000540supercontigsc0000540:73125..80788 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.205576	0.253247	0.154584	0.19031	0.69536	0.970859	12.4518	11.9153	3.43768	3.16712	3.57915	0.526732	2.87828	2.12964	3.05445	8.1326	2.25842	2.45795	0.3973	0.479064	0.683034	0.667049	0.271259	0.143476	0.839656	1.53858	0.110699	0.199792	0.205707	0.199581
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025591 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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