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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025574 ID=TCONS_00025574|Name=TCONS_00025574|organism=Clytia hemisphaerica|type=transcript|length=157bp
ttttgattttgaaaacttcTTTCTTGATCTAATTTTCATCATGATCAAAA
TTTGTACACTTGCAATTATTGTAGTTTTTTCCTGTCAAGCAAATGCTGAA
TGTAAGATTTTGGGCATTCCTCCAAATAACCATGGCATTGAGCCTCAAAT
CACCAGA Run BLAST on NCBI transcript from alignment at sc0000539:53146..54779- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025574 ID=TCONS_00025574|Name=TCONS_00025574|organism=Clytia hemisphaerica|type=transcript|length=1634bp|location=Sequence derived from alignment at sc0000539:53146..54779- (Clytia hemisphaerica)
TTTTGATTTTGAAAACTTCTTTCTTGATCTAATTTTCATCATGATCAAAA
TTTGTACACTTGCAATTATTGTAGTTTTTTCCTGTCAAGCAAATGCTGAA
TGTAAGGTGAGGAAGGATAATCCAAACTTGTACACAACGTTGTATCGACG
TTCATCTAACGCTACTTGGACGTTGTGAACATGAACAAACGTTGTCCATG
ATTAGTACAGGGTCGTCCGGAAAAATAATACCACTTCTATAGAAATAAAG
TTCTTGTGTGTGTTTCACTAAATTTGCAATGTTTATCTCTGTGTCATATT
TATTGTCATGATTTATTGTCATCTTTTATGAATAACTTTTACAAAAAAAA
TTCTCAATATCTTTAATGTTTTGATTTTATTCACATCTGACGATTGCTAG
GCCCGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCC
CCCGGGTTGCTAGGAGAGCATGAAACTCGGAGTTATGTACAATTTTTAAC
TTGTCAAGGAAATATATTATTTAACTTTAACGTCATGAAAATCGAAAGAA
AGTTAAATATTTTTAATCATGACTGTTGTAAAAACAATTTTTGTATTGTT
ATATATTTTCTTACATTTTGTTAAACAAACGCAACAACCTTCTACTCAGA
ATCATTTTTCAACACCGTACTTTTTTTCTGGACACCCTGTATAGTCAACC
TCGTTTCCAGGCCCTACCAATTCTTTTTATGAGAAACTATCCAATAAAAA
ACATCATTATTTCTAGCCGCCGCTTCAGTAGCCTTTTTCCCATTTTGAGA
AAGCCAAATACATTAACCAGCACACTCACTCACCCACTCCAGACAATGGG
AGTGTTTTCCACTGACTGCTTAAGCTAACAGGATTAATGTAAACTTTTGA
TAAAACGATGAATAGCCATAAAACTATTTATATAATTTTTGGATAAAAAG
AGATGGTTGCACATTATTATTTTCTTTTCAGAAAAATATTCTATTCCCAA
AACAACACAGAGGAAAAGCCGTTAAATCTTTTCCATTTTATATGTCGCAA
TTTTCGGGTAAATAGAGAGAAAATACCCCAAAATTTTCGTACTCGTTTCT
CTTGCCTAATTTTTAATAAAGATATTTATTTTTTATAGGACCTCCAAAAT
AAAAACGTTATAATATATGTCTCCCCAGTCTGCCCAAATTTTAGTCGTGC
AATTTCATGCACTTTTGATATGCTTTTTCTTAGATTTTGGGCATTCCTCC
AAATAACCATGGCATTGAGCCTCAAATCACCAGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025574-exon-sc0000539-1575043694:54674..54779 | TCONS_00025574-exon-sc0000539-1575043694:54674..54779 | Clytia hemisphaerica | exon |
| TCONS_00025574-exon-sc0000539-1575043694:53146..53196 | TCONS_00025574-exon-sc0000539-1575043694:53146..53196 | Clytia hemisphaerica | exon |
| TCONS_00025574-exon-sc0000539-1510915933:54674..54779 | TCONS_00025574-exon-sc0000539-1510915933:54674..54779 | Clytia hemisphaerica | exon |
| TCONS_00025574-exon-sc0000539-1510915933:53146..53196 | TCONS_00025574-exon-sc0000539-1510915933:53146..53196 | Clytia hemisphaerica | exon |
| TCONS_00025574-exon-sc0000539-1491911889:54674..54779 | TCONS_00025574-exon-sc0000539-1491911889:54674..54779 | Clytia hemisphaerica | exon |
| TCONS_00025574-exon-sc0000539-1491911889:53146..53196 | TCONS_00025574-exon-sc0000539-1491911889:53146..53196 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000539 | supercontig | sc0000539:53146..54779 - |
Blast
The following BLAST results are available for this feature:
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