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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025547 ID=TCONS_00025547|Name=TCONS_00025547|organism=Clytia hemisphaerica|type=transcript|length=1139bp
caccaatcactcctgattttgagTATAAGgtttttttaaatcaaaaatat
aattaaaagaGTTCTGCCCAGGCAGCAGAAACGTCAACATTATTCCGACA
AGCATCAAACAAAGagggaaaaagaagaaacgtAAAAAATGGTCTGTCCC
GTTGACCGTAACGATAAATGCAAGTTGCGGGTTGGTTGGTGGTACGATCG
ATGATGCACAACAACAATCTTCTTCTGGTTTGCTGGTCAATAAAAAGCTT
GATGAAGGCTTACTAGATAATGTGGCTGGCCTTCTAGATAGGCTAAGCTT
GGATGGGTCAGAAGATAATATGGAAGAGGTTGAAGTCAAAGATTACTTTT
TTGTGTTCAAAGAAGGCAATCATCATGTCTCAAAATGGTCTGGTTCTGTT
CTCCAAGATACCCTTTATATCGAGTTTGCTGATGGTACTCTTCCAGCTGG
TAGTCGTGATTGTTTTGTCACTCTTCTTGATTATGCCGAAGAAAAGCTTG
AAGTTACTAATGTGGTGTTGTGCTTccccaaaaatcaaattgaaGAGGCA
AAAGTATTGAGAGCTTTCATGTATTTGGGATTTGAAGTGATCCATAACTC
AACTTGTAATTTTGTTCCTCAAAGTGATACTTTCATTTTTATGGCATATG
GGTTTGAATAAAGaccttctttttgatttttaaattattttggttttgtA
AAAAATGGAGATTATTACATCACTGTAAAATGCATTGCTTTGAAGATGCG
TAATAATTTTTAAAGTATTATTTTGTATTTCTTAttgcctttttattttt
ttaaacaaataattatatttaaaaattaaattttcatttaaggCCATAAA
ATGCACTCTGGTAGTGTTTCAGGCTGATTTTATTATCAGAGCTCTTACCA
ATAACATTTGAAAAGTGAAATCCAAGATTATGTCATTCTCTGCTTCATTT
AAGGAGaattcaagcatttttgaaaCTGCTTAATCTTTTTTTAGACCTTA
AGACTATTTTATTTTCCTCTCGCTGGGAACTAAATGCAACATTTTTTTgt
ggttttaaatttttttaccaaaaatttgTTGGCTTGTTAATAGATAATTG
TTGGTTTTTTCTGTTGGTGATTCTAAAATTGTAAGTTTA Run BLAST on NCBI protein sequence of TCONS_00025547-protein >TCONS_00025547-protein ID=TCONS_00025547-protein|Name=TCONS_00025547-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MEEVEVKDYFFVFKEGNHHVSKWSGSVLQDTLYIEFADGTLPAGSRDCFV
TLLDYAEEKLEVTNVVLCFPKNQIEEAKVLRAFMYLGFEVIHNSTCNFVP
QSDTFIFMAYGFE Run BLAST on NCBI transcript from alignment at sc0000539:103768..123050+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025547 ID=TCONS_00025547|Name=TCONS_00025547|organism=Clytia hemisphaerica|type=transcript|length=19283bp|location=Sequence derived from alignment at sc0000539:103768..123050+ (Clytia hemisphaerica)
caccaatcactcctgattttgagTATAAGGCTGAACCTGTGTCGTGGGAG
AAGCCTTTCTTCTTTTAGagcaatataaaaaagaataagaagacaaatac
aaaaagtcaaaagtatATGGTTAATGCGGGTAAATGCTGTTATGCCCATT
AATACAGCACCAAAAAACAGGGTTGCGATCAACCTGCACCTTTAGGTGAA
AAGTTCAAGCACCAAAAACAGGGTTGCGATCAACCTGCACCTTTAGGTGA
AAAGTTCAAGGGTTAATGCTGTTAAGCCCATCATTACAGCACCAAAAACA
GGGTTGCGATCGACCTGCACCTTTAGGTGAAAAGTTCACAGACAATATGG
TCGCCAGTCATCCTATATTACTCAAACAACTGCAGACACCCTATCCCATG
TTTAAAATGTGGTCACTTGAATGTAAATGGTCTTTTCCACAAACTCGAAG
ATGTGAGAATTCTTTTAAGAGAATGTAAATTTGACTTATTTGCAATCACG
GAGACTCACTTAAGAGCATGAGTCTGCTAATGTCACCCATTTTCGgtttt
gttaacttttcaactttaaggctccagtgaaaaatctaggtgTATGCAAT
AATGATACCAGCTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AATCATGCATTAATTTGCATATTAAATTCATTGTGTAGTGTTCACACAAC
ATAATCTACTACACATTCACTTACAGACTGGTTAGAATTGCTCCAATAGT
TGAAAATAGAGTCATATTCTGTAGCAAAttgtatgttgcggacataacta
ttgataagtattttatcagatttttgacccccttaagcagttatgctaac
actttgacaatactaaagagttacatttgtaaaaaccatgcatttccttg
tttttttaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAATAAAAGAA
TTATCcaggaataaaagtgaaattcaaaactttattttttccaaattttt
tcaccTATTTGGGTGACATTACCAGACTCATGCTCTTAAAACGAAACTGA
GCatgatgatgatgatctaaAAATTGACAATTATCTCTTCTATTGGAGAG
ACAGAAAAGCTAACAACAGTTGGGGTGGTGTCCTCGTCTATTACAAAAGA
GACCTTGTGGTAGATGAAATTGAAGTTGATACAAAGATCGAGTCGATTTG
GATAGAAGGAACTATTAACTCTCAAAAATACCTTCTGGGTTGTATTTATC
GCcctccaaaaatgaaaaagtttcttcaaagTTTTACACTAATTCTGAAC
CGTTTTAACCATCGATCAAATATATTTCTTCTTGGTGACTTCAACATTGA
TATGTCCGAAGATAACAATAAACTAACGAAAGACTTTAACCAAGTTCTTG
CTGAACATTCTTTGACGAACATTATAATGAAATTTACTCGAACCACTGCA
ACCTCAAAGGCACTTATTGATCTGGCCATTACATCGAACCCAGATAAAGT
TTTGAAAACAGGAACATATGCAATGGGGCTTTCTGATCATGACCTCATTT
ATTTCTTAttgcagtgctgcaaatagAGAAACttcagttggccggtaatt
ttttgAGTGTAACGAGCAGGGGGTCTGGCGGAACCATCTTTGTAGTCTGT
TAAATACAGATTGACTTATTGGATTattagattggctaaacacctatttc
aatttaaaaactgtttctcttttaattagaagcgctattaagtatttatc
taagcctctaattatcaaattttgaccggacaaaatgaaaaactgagctt
cagaatggccggtagaaactacgaaatgcccggtaattaccggtcaccgg
ccgttatttgcagcactgtatTGAATCTACGGCGTATAAGTTCACCACCA
AAATTGATTTCTGTTAGAAATTACAAGGACATTGATAACGCCAAACTTAA
CAAGGACCTGGAAACCTGTCCATGGCATATTATTTCTATGTTTGACGACC
CAGACGACTCGTTATGGTGTTGggaacatctttttaaaaacgTCCTCTCC
TCTCACATTACAACTAGGGAAGTGAGAGTTCGAAACAACAATCAACCCTG
GATGAATGGGGATGTACGTAAAGCTATAAATGACCGCTTCAAACTATTAA
ATAAAGCAAGACAAACCCCACGAAATTCCAAAGAATGGAAGGACTACAAA
AGAGCCAAAAACAAATGCACCAACTTGATAAGAACCACTAAAGTAAATTA
CTGGAGAGAGAAATTTGTGACATGCGAGTCCTCAAAATCATTCTGGTcgc
ttgtaaaaaaattcaaagggaAATCAAATAGCCGACACATTGGTCGacct
taaaaaatgaaaatgataccATTGTTACTGATGACACTGATAAAGCAAAA
AcaatgaataaattttttgctAATATTGGAAAACAACTTGCGACACCTCC
ACAGACTGACGAATATGGATCTTTGAACTCGTACATTTATCGAGTGACCC
CTATTATATCTACAATCCAATACTCAAAAGAACTTCTTCAAAAATCGTTC
AAAGCTGCTGTAAAAATTGGTAAAGCCGGGGGTCCTGATAACATCACCGC
TAAGGACCCATCTTTGAACCCGGAAGCCTCAGTTGAGGGTTTACAGTACG
TTGTCAAATGTAGTTTATCGTCTGGTACTTTTCCAACTCAATGGAAAACT
TCTAAAGTATCTGCAGTCTTCAAGAAAGGCTCTAAATCGGATTGTACAAA
TTACAGGCCGATATCATTACTCTCAATCCCAAGTAAAATTGTTGAACATC
TTGTCTGCCCACAATTAACTGACCATCTCAGAGAGCATTGTCTCGAATCC
GAACACCAGTGGGGCTTTAGACCGAATCGATCGACCGATGACATCCTACT
CTATATGACCGAGAAGTGGAGAAAAGCCAGCGACTCCCGCCAATCAGTTG
GTACCCTGTtcatagattttcgaaaagcATTTGATACCGTATCCCACCCA
ATTCTACTAAAAAAGCTAAGCGCTTCAGGGGTATCAGGTGACTTTTTAAC
CTATCTTGAGAGTTATTTGTCGAATCGTAAGCAATTCANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTGTCGAATCGTAAG
CAATTCACTGTTATCAATGGAGTCAACTCAGATTGTGCTGATGTGGAATT
CGGAGTACCGCAAGGGTCACTTATCGGCCCACCTTGCTTTTCAGTTAATG
TTAACGACATGAGTGAAAGCATTGATTGTGATCTAGATCAGTTAGCTGAC
GACTCAACAGCGTACACATCAGATCCACATAGCGATATTGTCATCAATAA
CCTTCAAAGAAGTGCCCATCAACTTGAATCGTTTGCCAAGAAAAATTTGT
TAACCATCCACCCTGACAAATGCAAAGTTATGCTTATGTCTAAAAATCGC
TTTGTTGGTCCTCTTCAAAATATAACTATTTGTCATAAAAATGTTGAGAT
AATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNCTTATCAGCAAATCAAATACACGTGGAaatagaaaatcttcaaaaa
ttgacCAGGCAAAATTCACCTTTGTTGATTATAAACGATCATTTATGTAC
AGAGCAGCTATCGTTTGGAATTAACATTCCCAGCTCAATACGggaaataa
aaacttacaaagCTTTTACAAAAGCCTTGAATAAATCTGATTGTTtggat
aaaattaattttaatatgACGGGTCGTGCACTATTACATAAAGATTATGT
TTATTACTAAATTACATTTactgaatatatatttttttttcttcgcaaat
ttttagCTTATTATTACCTAGAGTTTATTTATGTACTTTTATATATGTAT
ATTTCTCCTAAATTCTCCTGAGTCTTAATCCTAATCAACTTTTTGTTCCT
ATACAAAAACTCCTAGATTCAACTAACTTTTAGCTTGATTCAACCAACTT
TTAGCTTAATTCACAAGATTttactttttcgttttttagccAGTAGGTCC
GCATCAGTTTTTTTACTGCCAATATGTACAGAATTGTGTATAATTGTATA
TAgttttgtatatagaacctgacctgctttaccaaataaattaataataa
taataataatNNNNNNNNNNNNNNNNNNNNNNNAATAATTAATTCAACAT
TGGTTTCATTAAAATGCACTTGGAAACTGTtatgattttaaaagaatcCA
ATTATAAAGGTCAGTTGGGCCTGTTCTGCCtccaatttgattttttgaat
tttttaaaatcctTTCAAATTTATATATTACTGTAAGTTGGTCCAACATC
GACATTCTATGTAGCAGGAATGGGTCTTCGGGCCTGATGTTAATTAAATA
TTAGATAGAAAGATAAATAGATAGCAAGCACTTAATTTTATCTTTCTTGG
TTGCTATAAGATTATGTAGTATGCATGTTTTTGGAGTCATTAGTTAAGTA
ATGTTTTCAAACCTACTTTTTTAGAATCGAATTGACTATCATCTCCTACA
AAATTTCTTAAGTATTAGGTACACTTAGTATGATCAGAAAAAGTGTCCTG
GTCTTTTTCTGATAGAAaagtgggtaggacccattccgaatgcattcgga
gggttcatatctatctatctatctatcattATTTATTATACACAACTATT
GTTAAAAATTCTAAACATTGCTCCTAACCAGGTAGTTATCCCATTGATTA
GTTGGGTGAAACCTCTATATGGATGGCCAGCATGTCCTGCTCCCCCAatt
tatttatataattttaaattattgTAAATTTCTAGTGTTATGTTATGCAG
GAAAATAAATTATATATCTTTGAATCGAATTTAAGCAATTTAAAGcagtt
tttttggaaattttttttggtcgtaaaaattggattttcttttatttggg
gaaaaaccttgaaaataccCAATAAATGGtgcaaaaaaccttgaaaaaac
acAGAAATTTTGCCaataaaaccttgaaaatggtgACAAAAATTCCATAG
ACACCCTGGCAGCACATTCGCGCGCagcattttaactttgtttatcaCAT
TTTGTGTCAAAGGTGTCAGTGTTTaaaaaggtcataatttgagacCACGC
AAACCACTGGCTGGCTATCAAACATTTTTCTGTGAAAAATGGATGATAGA
GAGAGTTCAATCAAACAAGGAGAAGAAATTCACTATTTCCATTGCATTAT
CTCTGATTGTCGCAACTACTGGAGACGACATCGCCCACATAGCATAGGTA
AGTCTCATCAGTCTGTTCACCACCTCTTTTAAGGCCCTTTAACTGCCTCA
Cagaacgaccctcgacatggcccgagaattctcgggccaaaacttttatt
ggaatgcgCATAAAGCCCGAGGATGGCCCGAGCATGGCCCGAGTTTTCGG
GCCGCGGGCGGGCCTCACGCGGGCTAACTTTTGAAATCATGATTTAAAcc
cgcgtgtaatttcaggactgcattttttcaatattttctctagaaaaact
tgatttcacttaaatatttgctattaaactggtcctggttttaaactttg
AAGCGTGGTCCACGAGGAGTTTGTTAAGTTCATTTAGCAAGATGAACTGG
ATGAAACGCgacgaaataaattaaaattaacattttcacacattttcaaC
GTCATTTTCAGGTTTTAANAAGCTGGATTAATCAATGGAATCTTTTGACA
CAGGCACAAAGGTATAGGTTGAACAGTTTACGTCTTAAGTCGTAGCCCGA
ACGTGGCCCGAATGATTCGGGTcaagttcgggccaaaagaattgataggg
tctctcggcccgaacatgacccgaagAGGCCTGaaaattctcgggccatg
tcgagggtcgtctcACAGACCAACTTTGAGAATAcccaaaaatttgactt
tctcAAAGATTTAGTCGGTCGGAGGGATATGGAGGACACACAAACCAAGC
TTGTATCAACAGGGCCTGGTCTAACTGAATTTTGTCAAGATCAAGAAGCT
GTCCAAAGACATAATATAATCTTTATATAATCTGactagtgaaaaaatta
aatttccttACACCTACCATTGTTGTATTGCTAATTGGGATTATAGACTT
TTGTAATATTTCCAAGTGttgatttgaaagaaatcttgGAATTTCCTTTC
GAGCCATGTACACATCTTCTGTAGATTTTTGGAGCTTATCTTTAGCAGTA
GTGTAGTTTTTCCATAGAGTTTcgttcatgatttctcttttatTACTCTC
GAAAGACACACAGATACAATTTAATTTGACATTCAGATATTGATAAATTT
GGTTATAAAGTTTAAAGAAGAAAGGAAAGCTcgaactttaaaaatttttg
ttttgattttagcgcgCCATTTTCATAAGCTAGAGAGTAATTTGCCGAAC
AGCTATTTCGAAAACATTTGCCTGGCCGTATTATCATTCGGTAaattaca
tattttttatacatTTAATTTCTAGACCGGAATCTCaatcttgaaaaatt
aaaaNCATATTTTTGATACATTTAATTTCTAGACCGGAATCTCaatcttg
aaaaataaaattacagACCAAAGTTGAATTTACAGACCAATGAATATCCC
ATTGGATCCACTGGGAAAGTGATATTGACTATCCGTAGATCtaacacaat
tttttttcctatccgtaATTCCGTTTTCAGGGGGTAGTGGGTCATTAACA
GTCAGGTAGgggcagggttgctagtaacggcttgtcactgtgccgggtgc
atactcggcgccttgggccccgcagggttgctagtaacggctcgaatttc
tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNcgaatttcagtcaggttaaaaaaggggtactt
ttacccatattataataacattacccccgtcttttttgtcattctataag
tatttccaaatttcgtCCTCTGTTGTGCGaatgtggctcaacggatagcg
tgtTGGCTTCCGAATCCAAAGGTCTTTCTttagtggtggttcgaatccga
cccggtgcgatgatttgattggtcgaaaaatgattgacaggtatcaTAAc
ttagtcagaaatgagaaactaagtctcaaacAGTCAGTAGAAGCAAAGAT
ACAgaagaaagataggaaaggaaAAAGAGTAGAAGGAGTGTTAGATATAC
GGATAGTAGTTATCACCTACCGATCCACTGATTGGAGAGGCGCTGCTTCT
GCCTGTCAAGAAAAGCTCACATCAAATTGAGTAAATGTTTGTATAAGAAG
ATAGTTGAGGTATATATAGACTTTTACATATAGTTGAAACCATACAAGTT
TTTGACTTAaggttttttgggattttttcttATCATGTCTAttctattat
ggttgagttacaggaggctctggCGCAACTATAGATGATGCTTTGACagc
atcccgtcagcaccttgaactgactacccaattcccctcacatggcatgg
gttgacccggccAAGGTTTGTTCACGTGAACCGTTGTGAGTGAGAATCGA
ACCTTGGTTGCCTGTATCAAGAGaggttgatgtccactataccacaacgG
CAACGCTAAAATGATGGTGACCTTAAAATTGTTAATTGTTCGAAAGCAGC
CAGcaaggcgacctttttttccaaTGTCTTCTGAGAGTTAtttttcagct
agaaattttgatctgttctgataagaAAATTCtgattgaaaaattaatca
gctaCAGGCACAAAGTTAGGCCACacgattcgaaaagttatcatgaATCA
CCAACAGGAGCCCCCAAAAGGGCATtggcagtctaaacttaaactcctat
atcaggattagaaactaggctagtcttacctttTTTAACTTTCCCTttat
ttacaacaatacaatgctgaaaagttgacacaacacatctctgactgaga
gaagtttatattgaaatctgcaacaaaaacgaaagtggtctcttctactt
aTTGCTTCCTGGCGCTCCTTCACAGCTGTTTataaaatttccaccaatga
agTTGCTGCATTTCAAATGGCCCTTCtcttttggcacccgtggcctccag
tgccttgcacgacaggCGGCtagctgtaaaatcccacccgtcatatactt
ttttcaatcagtgattctaaGGCTTAAGTTTTTTCTCATCTctaatttac
tgaagaaagccggaatttgatgcaagagttagattgtgaacaaagtgccg
taaaaaatcattgaataaaaaaagaactttaaatcttacaCTCTTTCCAA
CGCCCATGAGGGCCATTCCTgtagaaataatgatgtgttctgacgagata
TAGTATGTGAAGGATGGTTCATAAAAGCGAAAGACATAtataccataagt
tggtctaatatcaacatccctcgtctaattcctaCACCCtcctttagaga
aaggaatgatatgaaagcttgaatcactgattgaaaaaggattattcctc
tctaaGCATCACTAATCAAAGAAAaccagtttcaacctttctataacttt
cagctgataaaaacagtgtcggaattagaggagggtgtcgacattagacc
aagttacggtatatctatttttctgatccggcatgcgggaatagtgtcag
gacctgcagacGACCTTGTaaggttgggtatgggtgtggtttgggtgtgg
ttacgttgTGGTTAAGTTTGTACAATAGCCATCAGGAACACTTTCCTGGC
ATGAATCTGTGGCGCAGTGTATAAGGTATTGATTTTCCAAACGATGGAAC
TTtgcatttggtgggttcgaatcccacagGTGGCGATCTTTCTGTAAGTC
ATTCAGTCAGTTAGAAAACAAGGAAAGTAACTTGCATAGAACCAGGAAAT
AAGTCCAgatatgtttatgtttatgtttatgtttcttttctttaaagttg
atgcaaagtagtacaatgtgtacttagctcgaggctaatcaatatcaact
attaATTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTTACCACTTACTTCAATCCAGGTAGGAGCACTAACATAGGG
TGTCGTATCGTCCGCATAATTCGCAACCTTAGTATcctcaatgatgaaaa
agaggTCACATATGTCTGTCGTCAttatgaagaagccacgaccgacAAGA
TAGGGGTTTTAATCAaggtgttcttgttgtctagaaAACcatagaaagct
tcagaacacatttttttaagaaaacaagagaaaattgatttgatcttgtt
gcctagtaaccctagaaagtttcagaacacatctttcgtggaaaGAACAA
ATAGCTTACAAGTATATCTtggcaaaatgtttttcctatattttcataga
atattttcagccataaagtagttaagtttagggagacagaCAAATAGTGC
AATagaggtttcctagaaatcagtacacatcatttgtataacaAAATTGA
AGGTCTTAACATGTGTGGTCTCACGTACTAAAAAATCTCTCAGCCAACTG
CTTCTGAATGTAgttgacagttagtcacactagcgtcccgccaaaatgtg
tatcaaagattatgCTGGGAGAGCACTCTATCATTTACTTGACACGTAAT
AAAAAAAATGCACCAcgaaacttctaaagggattcatgaaaaaataaccc
ggtgctttttaatgaaattaacattttcgaaaactatgagaaattgccta
aaatttgagccatagaattcatgatgaaaaaaattgagccaagccaacat
tgaaaaataatttgaagatcaacttctcaagaaaaagatctacgggggag
ataGAACCCACCTAAATCCGCACACCGTGAGATAGTCTATTTCTCGGAAA
TTTTGCCaaacctcaaacactgacccatttatatgtgtggaattattttt
actttagtgtaTACACAAGGCCTTAAAAACCAAAGAGCTGTCTctggaat
tgaatgacaaaatttggttggttcaTATTCTGGCTGCTGCAAGGTCACAA
ttggtcattttgtctcattttaagttttcaagttttaattatttGTCTTG
TTCTTGACTTTtgacttgaacttgattcatgTAGCTCTCATCCTTATTGT
TGCAAAtgcatcctgtagatgactgatgttgtttttctgaaagcttgatt
tacTAATGTGACTAACTGGTTGACTGTTAAAGTAGTAAGTAGACAGCTGC
ATTTTTAATTCCATGAAACCAAAGGAGAGAGAGTGATAGATTTATAAGTT
TTCATTTAGATCTTTCAATGTAGATCAAAAGTAAAGGCTGTAATAAGATG
ATTTCCATCCCAGAgcatcaaattaaaaaaaatgagtacATAGTTGTCAA
CTTTGCCTCACAAAAATGCAGGAGAGCTCCAAGTTGGAAGGAATTTTCCC
GCGAAATCCGATTatcggaaatttttttcagaaaattggggaaatttttg
tcctaattttccaaaattagaaACTCTGCCATtctgttttttcaaaatct
gaatgtttttctttaggaaatcggaaattttttggaaatgtgGGAGATGC
GAGAgttttggctgattttttttCCTGCGGACAAAGACGTTGGCATGCGA
GAGTGTCCCGCCCAATAcaggagagttgacagctatgagAGGTGTAAAGT
CAAAGGAGTGTTAAacgttaaaggtttttttttacataagtatATAGTTC
CCGTTTGCACATACATGTTTCataccaggacagtgtctccAGCTATTctt
atattgtgctgaataaaTCGAAAATGTCACTTTCTATTGTCCATGGGAAA
AGGATCACTTTCGNGAATAAATCGAAAATGTCACTTTCTATTGTCCATTG
GGAAaggatcactttcgttttctgtAGAAATTGATCAATCCATTTACAGT
ACTGAAACTTTGCCTGCTGATGGATTGATAGATTTTTACTGACAGACTGA
TAGAGCTGCAAATAAGCGTCAGTCATCGGTCAATGTCTGACTGAAAAGGc
catttgaccgactgaaaatcttttttgttggTCACAATGTCCAAATGAAA
AGATGAATAAAATCATCAACTTGATTTGAGAGCAAATCTTCTGTACATTC
CTACCTTTAAAACTCTATTCTCTATTCCTTTTTAATTGCctctttttaac
ttttaagactgtttctaagatcacttttattgtattgttttcttcgtaac
tttaaaaagtgtttcaaagataacttttatcGAATTGCCTTCTTCGTTAC
TTTTAGGAGTCTTTCAAAgatcatttttatcaaattgctttttttgtaac
ttttaaaCAGTTAGGAGCATTAGGCGAGTTCCTGTACTCAGctgcaataa
aaaaaatcataacaacacacATTAAAACTGACGTTTGTGTCTTTTCTCAC
TTtctagcctagacgatgtagcaaacatagttagtataagcacactgtgc
ttttaattagctgaaaactttttttgcgtcagaaaaactttttcaaactt
tcagcaatacAAATTGACCAAACGGCTACAATTAACTTTACCTTAACTTC
ATCAAGCACTGGAAGTTTACTgaagttaagcacataagatattctcataa
ttaatgatattcattgaaacacTGTTTgttgtgcgctgcggtggagtccA
TGACATAACTCGCTAGCAACGAGTGCTTCTGTCTtcccgcaactctttcc
accattttagatggcctttaACAATAGATctaaaagggcgccataatctt
ggaagataatttgttttggtctccggttttgggaagtagcaatgtttttg
gttgttttcgatggaaaatggtaagaaacttgaGTTTACAAGTGTCtctt
agtttttgctggcttataaaatggcaggatcctggatggtttccctaact
gttaaaagtgtttcaaatatcactttaattgaattgCTTTTTTCGTAATG
TTTAGgagtgtttcaaatatcacttttatcaaatcactTTCTTCATAAAT
TTTAAGAGTGCTTCACCTTTATCAACATACCACTTTCTCTATTACTGTAT
GAACGAGTTATTTCTTTATCTATTAGCTTTCTGTGTAACTTTTACACGTT
ATTTTCATATTgttaaaaaagttaaagttaaaagttaaaaagttaagTTA
AAAAATATGTATCCTgctatttaaaaaattacaatgtCTGAATGACTGAG
AAGATTTTGAGTCTGACCAACTGGATTCAATTTCACTTCAGTCGGACATA
ATGTCAGAGTGACCAAAAANTAGTTAGTATATCCGACCAACTGGATTCGA
TTTCAGTCGGACTTAATGTCAGAgttaccaaaaatatttctttgcaGCCC
TGGCACTTCATCATCGCACTGGATCCAGTCTTAGGCTCCTTTAAAAATTA
AGGCCCCTTAAAATAAAGGTAGCAATGTAACATTTTCTGGTCATTTTACA
CTTTGCATTTATTATCTCTTTCTGGGACTGAGTGAGATTCTGTAAGACCG
TGAACTGTTTCACCACtagtttttttataatcttgtctcttgTTTatggt
ctggtccaactaactcgtctgcagggatattttTCCCTGCAAATGAAAGT
GCATATTGGTCAGTACATACCCAGTCACTGTAGATCagaatttttgcaaa
tttttttatattttcctaTGCGCTTGTTAGTTtatggaaaaagaaaatga
aaaaaactttgcagaaaaaggaaaaccaatcaaaatgaaaacacagcTCA
TTTGTAAACAAAATTGCTGATGACTGGGAGCTTTTATGTggctgttttga
aagttttcggAGCTTCTTAAAGAGGTCTtgtggtaagttgattatgtgtg
tctgcctgagtttccaaagttttgagagtctgtcaacaagggttcactca
caggctgTGTCATTTAAACCATGAAGGTATAAAACAAGagttgaatttgt
cggtaattggtcgttaaagtcttttgatttcttttttatgaaatatatca
aaataaaatactAAGCCCGCCCGACAAAATatgactttttagtagaactc
gcgatttctctgaacattcttactatcaatATTTAAGATTTCTAGCTTTC
TCATATTatacgaaaattaaataaaactttgtcCACGAAAGAAGTTTATG
TTCAATTTCGTTATCcattgaattttgttttgaaaagatattttctcaag
ccagaaaatgaaaagctctttataagcacacacaatttcgattcaatttg
tagacataaagttgCTAGAGAATTTtagaggaaagtatcaagcaataaag
ttcaccttaaagaaaacattgatcaaaaaatcttttcatttgatgaagga
ttgccaagtttacaggccttgttttagtccaaatattttcttacaatgat
gtcagaaacaatggatctcgtctcatctaatttctaaagcttaaatgagc
caataagatggataaaagagctcattgaaaatgcacgatatatgagactG
AGCATGCATACAATTAcattgtaacttttttaatcgtagggtgagattgg
ttacaatagcatacatctcctgtttctttatacatCCATATTTAAACTTT
ATCAATTAAACaccaaattttagaaactttgtttGTCAGAGGTAAGAAtt
tctggatacccaggctcaATCAATTAATAATAAatgatatttttgttatt
tggaaatATTTCTCATTAAGATGTTCTGTTTATGAATAACAACTTTCTTG
TATTTTCTTGCAAAACCTGTTATTctcttgtgaaaaaaaaaaggttttca
taATACAAAAAATGACTTTGTTACAAAAGCTTTTGTAAATTGAGATCAGT
ATTTGCGTAATGTATTTGCTCACAGTTTTGTTTGTAGTTTGATATTGCTC
CaactaaattttcttttaattttgtgAAGTAGAATGAGTTTTCTCAGTAT
TTTTTTCAGTAGTATAAAGATAGTTTTATTATGTTATTGTGATtttaaat
tgataatttttttattagttACTTTATTATCTATGATTGTAGCTCATTTC
CGAAACAGTTTCTCTAACAGTGGCATAGGATGATATCAATTTTTACTTGG
ctatttttttacacttttttctaggAAGTATTATTAATAATTTAGTGAAG
ATAGATTAATTTAACTTGTCTAAGGGTAGTATTCTTTTTATCTAGATTCT
TATAACTTTCTCttctttttaaggtttttttaaatcaaaaatataattaa
aagaGTTCTGCCCAGGCAGCAGAAACGTCAACATTATTCCGACAAGCATC
AAACAAAGagggaaaaagaagaaacgtAAAAAATGGTCTGTCCCGTTGAC
CGTAACGATAAATGCAAGTTGCGGGTTGGTTGGTGGTACGATCGATGATG
CACAACAACAATCTTCTTCTGGTTTGCTGGTCAATAAAAAGCTTGATGAA
GGCTTACTAGATAATGTGGCTGGCCTTCTAGATAGGCTAAGCTTGGATGG
GTCAGAAGATAATATGGAAGAGGTTGAAGTCAAAGATTACTTTTTTGTGT
TCAAAGAAGGCAATCATCATGTCTCAAAATGGTCTGGTTCTGTTCTCCAA
GATACCCTTTATATCGAGTTTGCTGATGGTACTCTTCCAGCTGGTAGTCG
TGATTGTTTTGTCACTCTTCTTGATTATGCCGAAGAAAAGCTTGAAGTTA
CTAATGTGGTGTTGTGCTTccccaaaaatcaaattgaaGAGGCAAAAGTA
TTGAGAGCTTTCATGTATTTGGGATTTGAAGTGATCCATAACTCAACTTG
TAATTTTGTTCCTCAAAGTGATACTTTCATTTTTATGGCATATGGGTTTG
AATAAAGaccttctttttgatttttaaattattttggttttgtAAAAAAT
GGAGATTATTACATCACTGTAAAATGCATTGCTTTGAAGATGCGTAATAA
TTTTTAAAGTATTATTTTGTATTTCTTAttgcctttttatttttttaaac
aaataattatatttaaaaattaaattttcatttaaggCCATAAAATGCAC
TCTGGTAGTGTTTCAGGCTGATTTTATTATCAGAGCTCTTACCAATAACA
TTTGAAAAGTGAAATCCAAGATTATGTCATTCTCTGCTTCATTTAAGGAG
aattcaagcatttttgaaaCTGCTTAATCTTTTTTTAGACCTTAAGACTA
TTTTATTTTCCTCTCGCTGGGAACTAAATGCAACATTTTTTTgtggtttt
aaatttttttaccaaaaatttgTTGGCTTGTTAATAGATAATTGTTGGTT
TTTTCTGTTGGTGATTCTAAAATTGTAAGTTTA Coding sequence (CDS) from alignment at sc0000539:103768..123050+ >TCONS_00025547 ID=TCONS_00025547|Name=TCONS_00025547|organism=Clytia hemisphaerica|type=CDS|length=342bp|location=Sequence derived from alignment at sc0000539:103768..123050+ (Clytia hemisphaerica)
ATGGAAGAGGTTGAAGTCAAAGATTACTTTTTTGTGTTCAAAGAAGGCAA
TCATCATGTCTCAAAATGGTCTGGTTCTGTTCTCCAAGATACCCTTTATA
TCGAGTTTGCTGATGGTACTCTTCCAGCTGGTAGTCGTGATTGTTTTGTC
ACTCTTCTTGATTATGCCGAAGAAAAGCTTGAAGTTACTAATGTGGTGTT
GTGCTTccccaaaaatcaaattgaaGAGGCAAAAGTATTGAGAGCTTTCA
TGTATTTGGGATTTGAAGTGATCCATAACTCAACTTGTAATTTTGTTCCT
CAAAGTGATACTTTCATTTTTATGGCATATGGGTTTGAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025547-exon-sc0000539-1491911889:103768..103796 | TCONS_00025547-exon-sc0000539-1491911889:103768..103796 | Clytia hemisphaerica | exon |
| TCONS_00025547-exon-sc0000539-1510915933:103768..103796 | TCONS_00025547-exon-sc0000539-1510915933:103768..103796 | Clytia hemisphaerica | exon |
| TCONS_00025547-exon-sc0000539-1575043694:103768..103796 | TCONS_00025547-exon-sc0000539-1575043694:103768..103796 | Clytia hemisphaerica | exon |
| TCONS_00025547-exon-sc0000539-1491911889:121941..123050 | TCONS_00025547-exon-sc0000539-1491911889:121941..123050 | Clytia hemisphaerica | exon |
| TCONS_00025547-exon-sc0000539-1510915933:121941..123050 | TCONS_00025547-exon-sc0000539-1510915933:121941..123050 | Clytia hemisphaerica | exon |
| TCONS_00025547-exon-sc0000539-1575043694:121941..123050 | TCONS_00025547-exon-sc0000539-1575043694:121941..123050 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000539 | supercontig | sc0000539:103768..123050 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008073 | ornithine decarboxylase inhibitor activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008073 |
ornithine decarboxylase inhibitor activity |
Blast
BLAST of TCONS_00025547 vs. Swiss-Prot (Human)
Match: OAZ1 (Ornithine decarboxylase antizyme 1 OS=Homo sapiens GN=OAZ1 PE=1 SV=3) HSP 1 Score: 80.1073 bits (196), Expect = 3.576e-17 Identity = 50/142 (35.21%), Postives = 71/142 (50.00%), Query Frame = 2
Query: 239 NKKLDEGLLDNVAGLLDRLSLD---GSEDNMEEVEVKDYFFVFKEGNHHVSKWSGSVLQDTLYIEFADGTLPAGSRDCFVTLLDYAEEKLEVTNVVLCFPKNQIEEAKVLRAFMYLGFEVIHNSTCNFVPQSDTFIFMAYGF 655
N + D L N+ DRL++ S D + V+ K N W + +LYIE G LP GS+D F LL++AEE+L +V +CF KN+ + A +LR F +LGFE++ VP+ FMAY F
Sbjct: 83 NSQRDHNLSANLFYSDDRLNVTEELTSNDKTRILNVQSRLTDAKRIN-----WRTVLSGGSLYIEIPGGALPEGSKDSFAVLLEFAEEQLRADHVFICFHKNREDRAALLRTFSFLGFEIVRPGH-PLVPKRPDACFMAYTF 218
The following BLAST results are available for this feature:
|
