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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025536 ID=TCONS_00025536|Name=TCONS_00025536|organism=Clytia hemisphaerica|type=transcript|length=1906bp
NNaaaataaaaaTTTTAAAATGTGATTAAAAATTTGAGCAAGTTattcaa
aaagattcaaatcGAAATTATTGATACTGGACTTGATCACTGTTCCTTTG
GCTCGGTCCCTGATTGCTTAAAGTTGAACTTCAATTCAGtcataaaaaat
taattatccaAGATGAGTGGATTAGTAACAACAGAATGGCTTGAGGAGCA
AATGAAATCGCCGGATTGGAAAGAAAAGTATTGTCTGTTAGATTGTACAT
GGGACTTACCAAAAGCCAAAAGAAATTTCCAAGAAGAGCATAATAATTGT
CGTATTCCTGGAGCAAAATTATTTGATTTGAACGAATGTCGCAATAAAGA
TGCTAAATTGCCCAACACGGTTCCGTCTGAGTTGCATTTTGTAAATCATG
TGAAGAAATTCCCTTTGTCCAACGCTAAACACGTGATCTTGTATGATAAC
AGTGAGCGCTTTGGATTGTTTTCTGCTCCAAGAGTATGGTggcttttcaa
tgtttttggacACTCCAACGTTTCAATTGTAGATGGTGGATTACCAAAAT
GGAAAAGAGAAGGGAGAAAAATAGAATCTGGGCCTTATACAGAAGACGAA
AACTTTCCAGCCATTGAAAACGAATTCAAGGCAGCATACAATGCTGATCT
TGTCAAAGATTTATCTTTCATGAAGACGAACTTTGAGCAGAAATGTCCAG
TCCAAGTCCTTGATGCAAGACCGAACGGTAGATTCCGTGGTGTGGAACCA
GAGCCACGTCCAGACATACCAAGTGGTCATATGCCTTTATCCATCAGCAT
CCCTTTCTTCACAAATTTTAACATGCAAGAAAAGGTTATGTTTCCTACAG
ATGAGATTAAATCTAATTTAACAAAAGCAGCAGTGGATTTGAATAAACCA
ATCGTTTCCAGTTGTGGTTCAGGAATCACAGCTTCGGCACTcttgttttc
actttttttggtgACTGGTCAACGGTATCCATTGTTTGATGATTCATGGT
TTGGTTGGCAGacaaatacaccaaatacaccagAATGGCAACTAAGAGAG
AAAACAGAAAACTAATGGATACTTTACTTCTAAAAAAAGTCTACCGTCGC
TCGGGGTAAGATTTAAATACCTGACTAAGATTCCACTTTTCCGAGAATCT
TTCTTGAATTGAATTTTTACGAAAAGTGACTTTATACAGACAGCTTTTGC
ATTTTAAGATATTACTTTCTAACACTCTTATAGTGTCTAAATTATCATTT
ATATGTTTGCCTTTGTTATATGCAACCGTTAACgactttatttatttgtt
tttaaagtttcTTATATCTTTGGTATTATATCAAGCAGAAAACTGTCCCT
GCACCCGTCAAAAGGGTAGTTTTAAAGTTTGTTCCAAAAAGCAGTCAGTC
TGCCATTTTAGTCAAAGTCATAGCCCGTACGTTTTTATGCATTACATTGC
TCTCGAAGAAATTAGGATataatgaaaagaaataattagttggaaaaaaa
ttttgagtgGATTTTTTGTTCTCCTGTTATTTATATTCTATTTATTCATG
AAGAGAAGACAAAAGTATTCACAATAACTGTTCTGGTTTCAGCTCTTTCA
CCAAAACTTCTTGCTCGTATAATTTAGTTagttttttcttctgaaatccC
GACACTTTCTGTGAAAAAACACTAaattttgccacaaaaatcctAGTTTT
TATGGCCTACtacttgtttgtttgtttattgtgatttttgtccattttta
taATGTATTATTTGTAATcaagcttttttatttaatgACTAATATTTGTC
TCACCAATTAATATAGTTGACGATAATAAATGatatttaatttgattttc
acaaGGTAGCAGTTTTTATTAACATGGGTGAAACCTAGTTTTAGCCTACA
AAATGC Run BLAST on NCBI protein sequence of TCONS_00025536-protein >TCONS_00025536-protein ID=TCONS_00025536-protein|Name=TCONS_00025536-protein|organism=Clytia hemisphaerica|type=polypeptide|length=300bp
MSGLVTTEWLEEQMKSPDWKEKYCLLDCTWDLPKAKRNFQEEHNNCRIPG
AKLFDLNECRNKDAKLPNTVPSELHFVNHVKKFPLSNAKHVILYDNSERF
GLFSAPRVWWLFNVFGHSNVSIVDGGLPKWKREGRKIESGPYTEDENFPA
IENEFKAAYNADLVKDLSFMKTNFEQKCPVQVLDARPNGRFRGVEPEPRP
DIPSGHMPLSISIPFFTNFNMQEKVMFPTDEIKSNLTKAAVDLNKPIVSS
CGSGITASALLFSLFLVTGQRYPLFDDSWFGWQTNTPNTPEWQLREKTEN Run BLAST on NCBI transcript from alignment at sc0000539:9881..16818+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025536 ID=TCONS_00025536|Name=TCONS_00025536|organism=Clytia hemisphaerica|type=transcript|length=6938bp|location=Sequence derived from alignment at sc0000539:9881..16818+ (Clytia hemisphaerica)
NNaaaataaaaaTTTTAAAATGTGATTAAAAATTTGAGCAAGTTattcaa
aaagattcaaatcGAAATTATTGATACTGGACTTGATCACTGTTCCTTTG
GCTCGGTCCCTGATTGCTTAAAGTTGAACTTCAATTCAGGTATATTTTGC
ATTAATTTTACCTTGACTTTCCTTTGTAATGaaagaggccccccagcggt
ttgcttGATGTCGTGATTAGAGATCTTtatggcgtgatggcgtgatcaag
attttggcgtgacacgtgatagggcaaaaatttgaggcgtgatgcgtgat
ttgggctatttttcgcttttttttgcgtgatgacaaattttagctatctt
cgtgatgcgtgatggagaaaatttttttgcatgatTGCGTGATTgtgggt
gccgctgggggggggctcATGACACTGGTTTTGGATAAAACTTTTCATTC
TGATGTGCCTAATAAGTACCCCTAAATAGCTAAATAGCCAGGTCTTTGAT
TACCTTATTTTTGGTAGAGGGGTACAATTTTCAGTTCCCCACAATAAAGT
CCTCATTTATTACAGACACTGAGTTTATGGAAAGGGATTTATATCTGATG
TTGACAACATTACAATAGTCATAGGGAAGGTTGTTTATGCAAGGAAATGA
TATCAATTTTTGGTTCTTATaacaaactttttataaaacggTACATCTGA
AAGACGTTTAAAAGATGCTTTATGGACGTTGATAGTTTTAAAATCCAGGG
ATAACCTTGGATATTCAAGGAGaactgatatcaatttttgGTTCTTATAA
CAAACTTTTTATAAATCGGTACATCTTAAAGACGTTTAAAAGATGCTTTA
TGGACGTTAATGGTTTTAGAATCCAGGGATAACCTTGGATATCCAAGGAT
AACACTGtttaaaatcgaaaataaaCCTGGTACAATCTGGTACAACCATG
GACTTTAAATCAAAGGATAACCTTGGATAACCCGGGATTAAAAATATGGA
TATCCCATTTCAAAAAGTCCTTTATTATCCTTAATTGTACTTGATTTCTT
GTACTTGATATCCAAGGATTTTTGCTCCCAAGGTGTACTTAATTTTGTAC
TTGATTTGTCCAAAGTATATCCTTGGATTATCCTTGATTTTGATACCAGg
gcaatttcattttttgcctgtcgaaggttggagcttgcccaagcacatta
caggcaaaatttaaaaatatcaatttttgctcatagacttcttaaaaagg
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGTTACTATTCGTTTC
CAAATCTGTACGTCTTCATTTGGTTCCCTTTCTGGTTCAATTTCGTCCGT
TGGGTCGTTGGGCCAGGGTTCCTTATTCGTGAGGTGCTGGGAAATCTCTT
GGTACGCCATTGTGCTGCATTGTGTAACGTTTGGACTTTGTTCCTGCAGC
GGCACTTGTTAAAATTGTATACTTCATGGTCTTAGTATGCTACAGTTACA
AACCTTTTAAAAGCATTAATTCATGAAATTGTTGCTAAAAATGAATTGCA
GAGTCACTGCTTTTCTCTGTCCTGTTATCTGTATTTGACAATTGGTGCTC
AAGCTCTCTATTATATATTATAAGATTACTTATCTAATCTATCTGGATTG
GTTGAAACTTAAAATTATGATGCAAGTGACCTAGATGAACCAATCAGTgc
tcagaaaattttttgattgttataggtaagtacggcatgaaattacaaaa
ttttatttttcttcaacagtcataaaaaattaattatccaAGATGAGTGG
ATTAGTAACAACAGAATGGCTTGAGGAGCAAATGAAATCGCCGGATTGGA
AAGAAAAGTATTGTCTGTTAGATTGTACATGGGACTTACCAAAAGCCAAA
AGAAATTTCCAAGAAGAGCATAATAATTGTCGTATTCCTGGAGCAAAATT
ATTTGATTTGAACGAATGTCGCAATAAAGATGCTAAATTGCCCAACACGG
TTCCGTCTGAGTTGCATTTTGTAAATCATGTGAAGAAATTCCCTTTGTCC
AACGCTAAACACGTGATCTTGTATGATAACAGTGAGCGCTTTGGATTGTT
TTCTGCTCCAAGAGTATGGTggcttttcaatgtttttggacACTCCAACG
TTTCAATTGTAGATGGTGGATTACCAAAATGGAAAAGAGAAGGGAGAAAA
ATAGAATCTGGGCCTTATACAGAAGACGAAAACTTTCCAGGTATTCATTA
TatactttaacaaatgaacacttAACAATAAGAACCGAtaataacaaaaa
ggaaaattttaacaagtttaaggtctatctacactgtaattaAATATTGA
ATTGTTCGAATTTAACTAGCGGGGGAGGAAGGGTCTTAATAATAGCTGGG
GAGGGTCTTAATAACAGCgaggggggacgtctattcgagAGACAAGAGTA
ATTTAGTACCTgtttttttcgtatttttagTCTATGCTTTAATAGGATAA
ATTTTCACGGATCTTTTTCGCACAATTCATCGCGTGAAATTGCGATGGAT
CGCTGCCTCAATAAACAGTAAAATGCGATGCATTTAGCCCATAGAATaca
ttttacacccctgtctcacagccccggtgaaacttttttcccattttctc
tCTATTGTTCCTCAGtcgaaaaatccaatggggatagttttggagtgcaa
ttttttaaattgaattttggatggggatgaaatcaaagtaaatttcaAAG
TGGGGCTGAAGTTGTggggtatttttccaccggggacgaaattttggtcg
AATTTTCCTATTGTGCTTGGGTCCcagcaggtctgtgacacagtgGTGTA
CATCTGTCttctgaaaattcttttttttcgtATTAAAGTAATAACAATAT
TAGGAATGAAAGTATCAATGTTTATAACGATGAATATCCCAAAGATTATA
GGATTTGTAGAATGACATCCTTCCAAGAAATAATTTAGGCTTCTCATTCT
TGAATGAGCTCTGATTAAACTTATTTTTGTAttgagaacaattttattaa
TCCTTACATATCCAATTTCCCTATCATTTATTTTTAGCCATTGAAAACGA
ATTCAAGGCAGCATACAATGCTGATCTTGTCAAAGATTTATCTTTCATGA
AGACGAACTTTGAGCAGAAATGTCCAGTCCAAGTCCTTGATGCAAGACCG
AACGGTAGATTCCGTGGTGTGGAACCAGAGCCACGTCCAGACATACCAAG
TGGTCATATGCCTTTATCCATCAGCATCCCTTTCTTCACAAATTTTAACA
TGCAAGAAAAGGTTATGTTTCCTACAGATGAGATTAAATCTAATTTAACA
AAAGCAGCAGTGGATTTGAATAAACCAATCGTTTCCAGTTGTGGTTCAGG
AATCACAGCTTCGGCACTcttgttttcactttttttggtgACTGGTCAAC
GGTATCCATTGTTTGATGATTCATGGTTTGGTTGGCAGacaaatacacca
aatacaccagAATGGCAACTAAGAGAGAAAACAGAAAACTAATGGATACT
TTACTTCTAAAAAAAGTCTACCGTCGCTCGGGGTAAGATTTAAATACCTG
ACTAAGATTCCACTTTTCCGAGAATCTTTCTTGAATTGAATTTTTACGAA
AAGTGACTTTATACAGACAGCTTTTGCATTTTAAGATATTACTTTCTAAC
ACTCTTATAGTGTCTAAATTATCATTTATATGTTTGCCTTTGTTATATGC
AACCGTTAACgactttatttatttgtttttaaagtttcTTATATCTTTGG
TATTATATCAAGCAGAAAACTGTCCCTGCACCCGTCAAAAGGGTAGTTTT
AAAGTTTGTTCCAAAAAGCAGTCAGTCTGCCATTTTAGTCAAAGTCATAG
CCCGTACGTTTTTATGCATTACATTGCTCTCGAAGAAATTAGGATataat
gaaaagaaataattagttggaaaaaaattttgagtgGATTTTTTGTTCTC
CTGTTATTTATATTCTATTTATTCATGAAGAGAAGACAAAAGTATTCACA
ATAACTGTTCTGGTTTCAGCTCTTTCACCAAAACTTCTTGCTCGTATAAT
TTAGTTagttttttcttctgaaatccCGACACTTTCTGTGAAAAAACACT
AaattttgccacaaaaatcctAGTTTTTATGGCCTACtacttgtttgttt
gtttattgtgatttttgtccatttttataATGTATTATTTGTAATcaagc
ttttttatttaatgACTAATATTTGTCTCACCAATTAATATAGTTGACGA
TAATAAATGatatttaatttgattttcacaaGGTAGCAGTTTNTATAGTT
GACGACAATAAATGatatttaatttgattttcacaaGGTAGCAGTTTTTA
TTAACATGGGTGAAACCTAGTTTTAGCCTACAAAATGC Coding sequence (CDS) from alignment at sc0000539:9881..16818+ >TCONS_00025536 ID=TCONS_00025536|Name=TCONS_00025536|organism=Clytia hemisphaerica|type=CDS|length=1806bp|location=Sequence derived from alignment at sc0000539:9881..16818+ (Clytia hemisphaerica)
ATGAGTGGATTAGTAACAACAGAATGGCTTGAGGAGCAAATGAAATCGCC
GGATTGGAAAGAAAAGTATTGTCTGTTAGATTGTACATGGGACTTACCAA
AAGCCAAAAGAAATTTCCAAGAAGAGCATAATAATTGTCGTATTCCTGGA
GCAAAATTATTTGATTTGAACGAATGTCGCAATAAAGATGCTAAATTGCC
CAACACGGTTCCGTCTGAGTTGCATTTTGTAAATCATGTGAAGAAATTCC
CTTTGTCCAACGCTAAACACGTGATCTTGTATGATAACAGTGAGCGCTTT
GGATTGTTTTCTGCTCCAAGAGTATGGTggcttttcaatgtttttggacA
CTCCAACGTTTCAATTGTAGATGGTGGATTACCAAAATGGAAAAGAGAAG
GGAGAAAAATAGAATCTGGGCCTTATACAGAAGACGAAAACTTTCCAGCC
ATTGAAAACGAATTCAAGGCAGCATACAATGCTGATCTTGTCAAAGATTT
ATCTTTCATGAAGACGAACTTTGAGCAGAAATGTCCAGTCCAAGTCCTTG
ATGCAAGACCGAACGGTAGATTCCGTGGTGTGGAACCAGAGCCACGTCCA
GACATACCAAGTGGTCATATGCCTTTATCCATCAGCATCCCTTTCTTCAC
AAATTTTAACATGCAAGAAAAGGTTATGTTTCCTACAGATGAGATTAAAT
CTAATTTAACAAAAGCAGCAGTGGATTTGAATAAACCAATCGTTTCCAGT
TGTGGTTCAGGAATCACAGCTTCGGCACTcttgttttcactttttttggt
gACTGGTCAACGGTATCCATTGTTTGATGATTCATGGTTTGGTTGGCAGa
caaatacaccaaatacaccagAATGGCAACTAAGAGAGAAAACAGAAAAC
TAAATGAGTGGATTAGTAACAACAGAATGGCTTGAGGAGCAAATGAAATC
GCCGGATTGGAAAGAAAAGTATTGTCTGTTAGATTGTACATGGGACTTAC
CAAAAGCCAAAAGAAATTTCCAAGAAGAGCATAATAATTGTCGTATTCCT
GGAGCAAAATTATTTGATTTGAACGAATGTCGCAATAAAGATGCTAAATT
GCCCAACACGGTTCCGTCTGAGTTGCATTTTGTAAATCATGTGAAGAAAT
TCCCTTTGTCCAACGCTAAACACGTGATCTTGTATGATAACAGTGAGCGC
TTTGGATTGTTTTCTGCTCCAAGAGTATGGTggcttttcaatgtttttgg
acACTCCAACGTTTCAATTGTAGATGGTGGATTACCAAAATGGAAAAGAG
AAGGGAGAAAAATAGAATCTGGGCCTTATACAGAAGACGAAAACTTTCCA
GCCATTGAAAACGAATTCAAGGCAGCATACAATGCTGATCTTGTCAAAGA
TTTATCTTTCATGAAGACGAACTTTGAGCAGAAATGTCCAGTCCAAGTCC
TTGATGCAAGACCGAACGGTAGATTCCGTGGTGTGGAACCAGAGCCACGT
CCAGACATACCAAGTGGTCATATGCCTTTATCCATCAGCATCCCTTTCTT
CACAAATTTTAACATGCAAGAAAAGGTTATGTTTCCTACAGATGAGATTA
AATCTAATTTAACAAAAGCAGCAGTGGATTTGAATAAACCAATCGTTTCC
AGTTGTGGTTCAGGAATCACAGCTTCGGCACTcttgttttcacttttttt
ggtgACTGGTCAACGGTATCCATTGTTTGATGATTCATGGTTTGGTTGGC
AGacaaatacaccaaatacaccagAATGGCAACTAAGAGAGAAAACAGAA
AACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025536-exon-sc0000539-1491911889:9881..10019 | TCONS_00025536-exon-sc0000539-1491911889:9881..10019 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1510915933:9881..10019 | TCONS_00025536-exon-sc0000539-1510915933:9881..10019 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1575043694:9881..10019 | TCONS_00025536-exon-sc0000539-1575043694:9881..10019 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1491911889:14150..14620 | TCONS_00025536-exon-sc0000539-1491911889:14150..14620 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1510915933:14150..14620 | TCONS_00025536-exon-sc0000539-1510915933:14150..14620 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1575043694:14150..14620 | TCONS_00025536-exon-sc0000539-1575043694:14150..14620 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1491911889:15468..16712 | TCONS_00025536-exon-sc0000539-1491911889:15468..16712 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1510915933:15468..16712 | TCONS_00025536-exon-sc0000539-1510915933:15468..16712 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1575043694:15468..16712 | TCONS_00025536-exon-sc0000539-1575043694:15468..16712 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1491911889:16768..16818 | TCONS_00025536-exon-sc0000539-1491911889:16768..16818 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1510915933:16768..16818 | TCONS_00025536-exon-sc0000539-1510915933:16768..16818 | Clytia hemisphaerica | exon |
| TCONS_00025536-exon-sc0000539-1575043694:16768..16818 | TCONS_00025536-exon-sc0000539-1575043694:16768..16818 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000539 | supercontig | sc0000539:9881..16818 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001763 | Rhodanese-like_dom |
Blast
BLAST of TCONS_00025536 vs. Swiss-Prot (Human)
Match: THTM (3-mercaptopyruvate sulfurtransferase OS=Homo sapiens GN=MPST PE=1 SV=3) HSP 1 Score: 214.927 bits (546), Expect = 1.416e-63 Identity = 107/280 (38.21%), Postives = 165/280 (58.93%), Query Frame = 1
Query: 169 GLVTTEWLEEQMKSPDWKEKYCLLDCTWDLPKAKRNFQEEHNNCRIPGAKLFDLNECRNKDAKLPNTVPSELHFVNHVKKFPLSNAKHVILYDNSERFGLFSAPRVWWLFNVFGHSNVSIVDGGLPKWKREGRKIESGPYTEDENFPAIENEFKAAYNADLVKDLSFMKTNFEQKCPVQVLDARPNGRFRGVEPEPRPDIPSGHMPLSISIPFFTNFNMQEKVMFPTDEIKSNLTKAAVDLNKPIVSSCGSGITASALLFSLFLVTGQRYPLFDDSWFGW 1008
LV+ +W+ E +++P + LLD +W LPK R+ + E IPGA FD+++C ++ + + +P HF + + + A HV++YD S++ GL+SAPRVWW+F FGH VS++DGGL W R+ + SG + + PA EF+A + +K +K N E + QV+D+R GRFRG EPEPR I GH+P +++IP FT+F QE + +EI+ + VDL+KP+V++CGSG+TA + +L P++D SW W
Sbjct: 9 ALVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAAFFDIDQCSDRTSPYDHMLPGAEHFAEYAGRLGVGAATHVVIYDASDQ-GLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSG---KSQPAPA---EFRAQLDPAFIKTYEDIKENLESR-RFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTVNIP-FTDFLSQEGLEKSPEEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEW 279
The following BLAST results are available for this feature:
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