TCONS_00025528 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025528
Unique NameTCONS_00025528
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length123

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025528 ID=TCONS_00025528|Name=TCONS_00025528|organism=Clytia hemisphaerica|type=transcript|length=123bp
TGTCTTTCAAACTGTTAACTGATGTTCCTTTCTGCTTTCTGATAAATTCA
CATAATGACTAATTATTGCTAAGTGGGTGTTTAGAATCCAATTTTGAAgc
ttcaatcaatcaattaccATAAC
Run BLAST on NCBI

transcript from alignment at sc0000538:176201..176323

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025528 ID=TCONS_00025528|Name=TCONS_00025528|organism=Clytia hemisphaerica|type=transcript|length=123bp|location=Sequence derived from alignment at sc0000538:176201..176323 (Clytia hemisphaerica)
GTTATggtaattgattgattgaagcTTCAAAATTGGATTCTAAACACCCA
CTTAGCAATAATTAGTCATTATGTGAATTTATCAGAAAGCAGAAAGGAAC
ATCAGTTAACAGTTTGAAAGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014336XLOC_014336Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025528-exon-sc0000538-1491911889:176201..176323TCONS_00025528-exon-sc0000538-1491911889:176201..176323Clytia hemisphaericaexon
TCONS_00025528-exon-sc0000538-1510915933:176201..176323TCONS_00025528-exon-sc0000538-1510915933:176201..176323Clytia hemisphaericaexon
TCONS_00025528-exon-sc0000538-1575043694:176201..176323TCONS_00025528-exon-sc0000538-1575043694:176201..176323Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000538supercontigsc0000538:176201..176323 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025528 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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