TCONS_00025487 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025487
Unique NameTCONS_00025487
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1401

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025487 ID=TCONS_00025487|Name=TCONS_00025487|organism=Clytia hemisphaerica|type=transcript|length=1401bp
CGGCACCGAATGTTCCCCACTACGCAAAGAACAAAGCAGTAGGAATAATG
AAACCAGGGCACGTGTTTACAATTGAACCAATGATTAACCTCgGTACTTG
GCAAGATACACTATGGCCTGATGATTGGACTGCCGTTACCAAGGACGGTA
AAAGATCAGCACAATTTGAACAGACATTCTTAGTAACGGAAACTGGAATC
GATATTTTAACAGCAAGGAGTAACGGACGACCTTATTTTATGGACCAACT
AGAAGGAAAACCTTTATAATGAGTTATTATAATCCTCTCTCTACGGCTTC
TAAAACTGGTGAGAATACCTTTCTCGTTGACTTATAGACTGTCAAACTGG
CTTTCAGTCGTCGTTTAAAATTAATATTCCATCGTTTTCCGCTTTCAAAT
GAAACTCATAAAAAGCCGAATCTCACTTTCGGAAAACCCGACAGATGGAT
AGATACCGTTTTTCTATTCCGTTTTTCCGATCAATGTTAACTAACAACCA
TCTTGAACACAATGACAAACATTCCATTGTTTGATGGAAGGGAGTACCGA
ACTTGAGTTTTAAAACCAATATAAACGATCGAAATGAGAATTCTAAACCA
GCACGATTCGAATCGAGACACAAAGATCTCCTTATGAATCTCCACGATTT
TTCCGTGTCTAATTCTATTAGCGATGCTTTTATCTTAATATCTCTAAGAA
TTAAGAATCATGAATTTCGACTTCGAAGTTTTTAAACTTGCTTCGAATTT
TGTAACATTTGCTAATAAATGGGCTAATCCccaaaaatacatgttttttt
tataaggacaaactatataagaacataaggcttcgctggccaaaatctTG
AGGCTTTGCGAACTCTAAAACATCCGATTTCTTAGAGaaatggaccaaaa
tactcacaaaatggtgaaaatcagaacatgttaagaacacttttagccca
aaactcaaaaagttaataacaaccgaaggcttaaaaattttagatgttct
tataaagaaaacgtgtaccTCTTATGTTGAGAAAGTCATCATGTTCATTA
TGTTCAAACGCACCCCTTCCCCCCAATTATTTTGGATTTATAGGTACCAC
TCCCTTAGATTTGTATCTACATTTTACAAGGCTTACCCTACTTCTTTAAC
AGTTGACTTTTCAGGCTGTTAAGCAGGGCCCACGCCACCGGTAAGGGATT
GCCCACCAATTATTTCGGATTTATAGGTACCACTCCCTTAGATTCGTATC
TACATTTTACAAGGCTTACCCTACTTCTTTAACAGTTGACTTTTCAGGTT
GTTAAGCAGGGCCCACGCCACCGGTAAGGGATTGCCCCCctcccccactt
ttttgcaaagtagaaatttttggttgcgcctcctttgACTCTATAttcgt
g
Run BLAST on NCBI

transcript from alignment at sc0000536:167150..176288-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025487 ID=TCONS_00025487|Name=TCONS_00025487|organism=Clytia hemisphaerica|type=transcript|length=9139bp|location=Sequence derived from alignment at sc0000536:167150..176288- (Clytia hemisphaerica)
CGGCACCGAATGTTCCCCACTACGCAAGTAAGTCCATACACAATGTCGTA GCTGCCGGGGAGGCAGAATGAGTTTAATTTTAAGTGCATTTTTTGGCCAT CTTGAATTTAAAATTCAAACACTGAACCTCAGTAACCCCAAACTCCCAAT ATCAAAATGTTTCCTTGGCACAACAAACAAGAAATAAAAAGGCAATAGAA AGAATTTCCCTCATACCGTTCCCTTAAATTCATAATATACATGAATTTCT AAAATGTGTCGCATACAGAAAAAGTTTTTTTGAAATCGCCTATCCAACTT ATCAAATAAAGCGTCTGTCGAATTCGCTTTCCGTGAGCAATAACTTTCTC AGACCCCCAAACCTTAAAATTGATGAACTGAATGATGTGACAGATTTCTT TTCGTTCTCCTCATTTTTTTCCAGAGAACAAAGCAGTAGGAATAATGAAA CCAGGGCACGTGTTTACAATTGAACCAATGATTAACCTCGGTAAGAAATA TTTAAAAGATAGATAACCGATAGATAACCTATCAAATTTTTTCTGAATAT ATTTTTTTGAGTGTAATAGTTCATCTAAAGGTCGAGAAAAAAAACTATGC ATAAAAATAAACTTTCAAAGTTTAAAAACTTTATTCTGTAGTCAAGTTTT GGTCAATTTAGTCAACTTATTAACAATAATTGTTATAAAAGTCCAGTCCA GCTATTTCGATAATCTAAGTTTATTATCCCGATCATCAAAAGTTGCCAAC TCTGTGATCGATCTTCTACTAGCCATCATACTTAAATTTGATTGGTTTTC AACAGTGGTCGCTAAGCAACGTTTGATAAACAACGGTGAGATGGTGCGTA ACGTTTGATTAACTTTCCGTTTCAGTTCTTGATTAGTGATTGTGTACACT AAGGGGTTGACGATTGTCGATGCGAAATTGAGCAAAAACAGGGCGTAAAA TGGTCTCATAGTTTTGTATGGAACACAATAAGAACAAAATGCCTCAACCA GTATCACGCACACGAAGGGTAGTGTACATAACACGTTTGTTGTCACTATT CGCACAGTTGTAAATGCCGCTTTGATATTCCATTCTCTATTTGGGGTACA TCTGAAAGAAGCTGTTGCCTTATGTAGAGTCTTATAATGTGACGTCGCTA GCCGTAATATAGCGATGTTCATAAAGATAGTTGTCAGCATCGGGAGTATG ATTAAAAGAAGCGACCACGCGATCAAATACTCGCGGACAACGATCCGCGT CAACACGCAATTCTTACGGTTAAGCGTTGAAATGTGATCTGTGATAGGTA AGATGGCTTGGCGTGATAAAAGTAGTCCAGCGTTCAGAAACGAAACAGCC CAAATGATGATGATCACAATAATCATAAAACGGCGCGTCATGATCCGTGG ATAACGTAAGGGGCGCCGTAATACTAAATATCTGTCGTACGATAAGAAAG CAACGACGGCGACTGACGTCGTATACGCAAGCACGGTGGCAACCAAAACT CCTTTGCAAAAACTGAACTCCCCAACCACGTAGATACAGATACCAAACAG GCAGCCGAAGCTCGCATAGAATCCGTCACACAACGCGAGACTTGCGTAAA TTAGGTAATTTCTCGTTCGGTACAAACGACTTTTGAAGAGAGTCCATATA ATGATTGTGTTAATAAAAAGACCGATTGGTCCTATAATCGCAAATGTCGC AATGATGATTTCACGCTGAGCCATTTTCAATATCGCTTAGAAATCAAATG AAGATCGGTTCTCTTATAAAGATATTTTTCCACTTTTGAAGTTAGGAACG TAAGTTTGCTTTCTAGTTTGCAACAATTGGTTTTCTTCTTTAAATGTCGT TGAATTAAATGTCTTCCTGATTTACAGCCTGTTACTTTGCCGTTTTATTG AGAATTGTTCCTTGATTAGGTCTCATTGTTTCTTCTTGTTTTATTTCATT TTTACATCGACTCCACTTCTTGATTTCTTTTTTCTTCTAAAACGTAAAAA TACTGAACATGAGAAAAGGCGTTTTTTGATTTTTTTTTTCTGAAACAAAC CATGTACTTGATTACAACCCTTACATTTCTATTGTAACCATGAAGAGTCA TTTCAAAACAACCTTATTCTTAATTTACTTTAAACCAATTAACTTTTAAA CAGCTGTTGATAAGGGGAAAATAAATTTCTTGAACAGAAGGAAGTAGATA TTTCAAGATGGCTATTTGAGTACCAGTACCCTCCCCACTGAGCTTTATAT CTTACTATACTTAAAGAATTTCATATTTTTTGTCCGTCACCCTGAAATGG TAGGCCAGCTGCGATCTCGAGTGGTTTGTCAGGGGGTTGATTTGAGTATG AAATTAGGATTTCGTGCAGTCTTCCGACAAAAAAAATAGACTTAGACCTT CTGCGCGAGAAGTGGATATATGTTGTCTACGATTGTTTTGAAATCAAACT ATAAATCATCTACTCTACTCGATGTACTCCCGCCGTTGCTGTAAACTAAT TCAAATTCCCTTTGAAGATAAAGTTAGAGATAATCAACAATACCATATTT ATCATTCTAAGGGCACTTGATGTGCAAGCTAAACCGGCGTTTGCGACGAC GGGAACCGTCTAGTAAACTCTATAGCTATTTTCTCAATCTCTCCCAAGCA AAACAACTACTAAATGTGAGTGTAATGTATCGAGAGCGCAAGAGCTACTT TTCCTTAGTTTTAACACTAAAAATTGAATCCTTTTGAAGGTTTAACGCTC TTTTACTCGATTTTAGCGTGTAAAAACGCCTATAGGACGGACATCGCTTA TCAAATTTACGAATTTTTGCCTTTGGAATAAACATCGAAATTCTATTCCT CAAATAAGGCAAAATATCGAAGCTTCTTTCTGAAGACTAGTGGAATTACT TCAACAATACTTCAAACTTTGATGCGAAAAATATGTATGGTAGAACTTAG ATTTTTTATGGCATTTTTTAAGTCAGCCTGAGTAGACTTGTAATACCGTC ATTTGACGTTACAAACTCTCTTGCCATGGCGATTTGAAAATGTCTCTCTC AAAAGATATTTCTACATCTATGAAAAGATGTCTATGCAAATTTTAAAATT CGAATCTCACTTTAATAACTTCCTTCTTGAATCTATAATTCGATATTAAC CTGTGTTTATCGGTCTAGGGAGACTTCCACTTCATCGAAGTTTTTCTGAA AGTGGTACCCAAAAAGAATCCGTTTTGGTGCTAAATCTTTGCTACTATTC GATACGCCACCGTATTCGATAAATCTTCCTTTCTCCATGAATGTCTAGAC ATCAGAAAGCGTCAACTGTAATTATTTGGAATGAAATATCAAATCTTTCA TTATTATTTGGAAAAAGATTTTTATTAGACATGAGAGATAGATAGCATAT ATTTCACAAAAGAAATCATTTTCTAGTTAAAAGGACGAGAAAGAGAGGAG ACGTACTCTTGAAATTGAGATTTCACAATTTTTGGAGAACCCTTAATATT ATTTAACTCAGATTAATATTCGAATTCTCATCCTTGCGTCCTATACAAAA TATTTTCCCAGTGCGAGAGAATCATGTTTCTTATGTACACGTTTTTTTAT AAGGAGATCCAAAATTTTTGAAGTCTTAACTTTTTGAGTTTCAAGCCTAA AAATGTTCTTAACATGTTCTTAATTTCACCATTTTGTGAGTATTTTTTGT CCATTTTCCTAAGAAAATAGGTGTTTTAGGGTCTGCAAAGCCTTTAAATG TTCTTAACTTGTTCTTAATATTTTGGCAATCGAAGCCTTATATTCTTATA TTGTTTGTTCTTATAAAAAAACGTGTACTCAATTCCAAACCAATCTCCAT CCAATTTTCATTTCGCAAAAGTGTTAATAAATGATTAATATACTACTCCT TTGCAAAGCTTGTCAAGTGTTTTCAAATAACCTCTTCGATGGGATTGTAA CATATTGAACCCTTTTTTTTTAGTCCCAACAAATCAGTCAAACATTAAAG ATAAATATTTTGCACAAGCCAATAACAAGTTAGCATTCAATGTTAATAAA TGAAAATTTTTCCAACACTTCTTTAACAGAATGCCCTGTCAATTAATAAA TTTTCATTTTCGTTTGAAAGAATCAGCCTCCAGGAACGAATTGCACTGAC CTTTATAAACCCTAGACAAAGCTAAACCCGCCATCTTTGATCGGAGTTTT TAGAATAGTGGTACCTGCCAAAAAGCCATTACATTGTTAGAAAAAATAAC GCAAACGGTGCTACACCATTAAAAGTATTTAAGGAAAAGTAGGCCTAGCG CTCTTGACGTATTTACATCACTATTGAGTAGTGCTAACATTATGGTGTCA CTTTCAAAAGACTCCGATTAAGACATTTTGCTTGGTCGGTATTGAGAAAC TCCATGGTCTATATAAAGCTCAGTGAATTCTTGTCACATATATGAAGTCA ATCAGTCCATCTCGAACAAATTTGTAACACTTGTAAGTACTAAATTGTCA ACCACCCCTCCTCTCCCCGAAAGATGTGGGCTCAATAAAAGATATAGGAA AGGACCTTATCCTTGTAAAGAAATGATTGGAACCTTAACTGTATCCCCTT TTTTCTAATGAATATTTTTTAATATTTGCTGTAAGTCTCCAGAAATGTTT TAATAAAGGTGTGATTATAGCGAAAAATGAAGATGGCTCAATATTTAAAC GGGAGACAGCATTTGTGTATTTTAACACTTCTCATGAAATAATGAAGGCC AGTACCGCCCACTTATAATAGGGTCATCTCCCAAATAATGGTTCCACTTT GAAATATCTAAAGGAGATTCTTAAATTCGTATTAATCATAGAGAGATTTT TGGACCTATTGTTGAATTTATAGACCAAATGCAATATGCCTCCCCTAGCG GTTTGCGTGAATGCGTGAATGGGCTTTTACAATTCGCGTGAATGCGTAAA AATTAAAGAAAAACTGCGTGAATGCGTTAATCGGAAAACATTGCGTGAAC ATAAATTGCGTGAATTGCGAAACAAAATTGTGTGCATGCGTGAATTTGGG GAAAAAATGCGTAATTGCGTGAATTGAATGTCCGATGGTGGGCTCCCAAT ATTTCTTGTGCCAAGTATTCTTATGATCACTGTTAAGGGCAAACCAAATT TTCATTTCCATTGACAATAGAGTGGAAGAATAAATTATGACCCACCTTAA GGTATTAAAATTTCCAAAGTGGTAAACGTTTCTTTTCAACAAACAAACAG AATTAAAAGTTCTGATAATAATGATGATAAAGTTCAAAACATCAACAAGG TCAGGTCACTATAAATGCAAGTCTAACATGCATGCTGCTTGACGACTAAA TTTTGAGTGAAGATAGGATTCGGTATAGTGTGGAAAACTGAGAGATTTCA TTTTGGTTTTGCAGGCCTGGTGGTGGCGGTGGCGGGGAGAATGGGGAGAC TTCAGCCTCCCCACTTTAGATCAAATGAGGCTGTTGCGAATTTCATCTCA TTTTAAACCTTCAGCCTCCCCAATTTTATGGTTGTTCCGCCGGGCCTGGT TTACACAAATTGATAATTACTCCATCACAATTCCATACAAAACCTTAATG GGTGTCCGAAAAACGAGTGGAACAGAATTTAAATAAATTAAAATTACCAA ACTTTTAATGAGTTTCTATGGCCTAATTTTACTATATTTCTAATTAAAAA ACCTACGAAAAAACCACTTGTATATGCACTGATGATGTTTTTTAATAAAT CGAAAAGCTTATGCTGAAATGTTTTTTGAATCATAACTTTAATTTTCTGG CTATTTTATTATAAAAAATCTATGTTTCTAACTTATGCTGAAATGTTTTT TGAATCATAACTTTAATTTTCTGGCTATTTTATTATAAAAAACCTATGTT TCTAACTTATGCTGAAATGTTTTTTGAATCGTAACTTTAATTTTCTGGCT ATTTTATTATAAAAAACGTGTTTCTAACCTTAGGAATTAGAATGGTTTAA TAACGAAGAAATCATTCAATCTCTTTTTAATTGTTCTAAACTCCAGTGAG GAGGCTGAAGGCTCAAAATTAGATAAAATATGCTAAGAATTTGAGAAAAA ACTCTCATTTGCTTAAACGTGGAGAGACTGAAGTCTCCCGAGTCTCCCCA CTTCCGCCAGACCTGTACAAACTATACATAAAACACCTTTATACCTTTAT CACTGTCAAACAGGTATCATAAACAACTCTTGCCCACAACAGTGCCAAAC GCCGACTAGATAAAAGCAGGGGTCTTATTAAGGCCTCCAAGGCCCGAAAA AAAAATACAATTCGCTTTTCGAAAAGTTCGGTTCGCCGCCTCAAGTACAT ATTTACGCTAATCAAATAAACTGCGCTTGCTAAGAATTCGCCGGTCTAGA ATCTAGAAATCGTCATTCGCCAGCCTACCAAAAACAAAACAAAACCCCTG TAAAAGTATAACGTCCTTGGTTAAGATAATCATTTCTATACAACAGTGCT CGGTTCGGAAAACTTTAACCTTCTTCTGTTTAAAAGAAACAAATAGAAGA TTTGTGTAGGAGTTTAGTTAGTTGGATGGAAGTAAAATTCGCGTTATCAT TATAGCATCACATTAAGCTGTGTTTAAACAGCAAGAAGTTCTCGAGTACA AATTCAATAGAAATGTCTATTTTCTTTTTCTTCCCTTTTTTTTCTCGTTC CCTAATATTTGGTTTGTTTCAATTTTCATCCCCTGGTTTTTCTTTTCTTA TTGACTTTGAATTTTTTCATTATCTAGTTTTAGTCGGCCGAATGTCTGTC TTGCCTTCCTATTCATTTTGACGAAAGTTGGCTGCGACTGTTTTAAGTCT ATGTCCTTACTTCTTATGGCGCTAATGAATCATTACTCTTAGGTTCCAAA AAAACGCCCCCCCCCCCCCCGTTTATTAATTTTTAATTTTTTTTCAACTT TCAAAGAGAAGGTCCCTTATTCTGCTCTAAATAGCCTGATTTTAGCCTAT ATTCGCCTCATTTTTGGGTTTTCGTAATTACAATTTCCAACCCCCTCCCC CCCCCCCCCCCCCCCGTTTATTAATTTTTAATTTTTTTTCAACTTTCAAA GAGAAGGTCCCTTATTCTGCTCTAAATAGCCTGATTTTAGCCTATATTCG CCTCATTTTTGGGTTTTCGTAATTACAATTTCCAACCCCCTCCCCCCCCC CCCCCCCCCCGTTTATTAATTTTTAATTTTTTTTCAACTTTCAAAGAGAA GGTCCCTTATTCTGCTCTAAATAGCCTGATTTTAGCCTATATTCGCCTCA TTTTTGGGTTTTCGTAATTACAATTTCCACCCCCCCCCCCCCCCCCGGCA ATTAGGTCCCCCTGTTTATTAAAAAGGTCCTGTTCCGAAAATTCGGTCTT TAACGGTCCCAATAAAGGTGTTTACTTTTTTTTACTGATTCGCGAAAAAT GTAATCGCAAGAATCTTCAATCCAATATAAGTTTTTTTGGGGTAGAAGAA GCAATATTTTGCTACAATTCTGACGATTGCACTCTTCGTCCGTTAATTGA AATTGCATCGATATAAGTAAGTTTAAACTAATATTCATTCAAACATCATT CATTCGCTCTGTATATGTTTTTCCATTTCTACCAGGTACTTGGCAAGATA CACTATGGCCTGATGATTGGACTGCCGTTACCAAGGTAAAGTACACATTT TTTTCCAAGCAACTCCAATTTTCGAGTCAGCTCTGGGGTTGCTTAAATAT TTACTTTGCTCATTTTCTAAAAATTTGCCTTGAACAAAAATATAGAAATA TTTTTCGCGAGCATGAACTTTTGCGAATCAGGGCAAAAACTAGGGCGAAC TATTTTCAATTTTTTCACTTCTTTTTGACAGGACGGTAAAAGATCAGCAC AATTTGAACAGACATTCTTAGTAACGGAAACTGGAATCGATATTTTAACA GCAAGGAGTAACGGACGACCTTATTTTATGGACCAACTAGAAGGAAAACC TTTATAATGAGTTATTATAATCCTCTCTCTACGGCTTCTAAAACTGGTGA GAATACCTTTCTCGTTGACTTATAGACTGTCAAACTGGCTTTCAGTCGTC GTTTAAAATTAATATTCCATCGTTTTCCGCTTTCAAATGAAACTCATAAA AAGCCGAATCTCACTTTCGGAAAACCCGACAGATGGATAGATACCGTTTT TCTATTCCGTTTTTCCGATCAATGTTAACTAACAACCATCTTGAACACAA TGACAAACATTCCATTGTTTGATGGAAGGGAGTACCGAACTTGAGTTTTA AAACCAATATAAACGATCGAAATGAGAATTCTAAACCAGCACGATTCGAA TCGAGACACAAAGATCTCCTTATGAATCTCCACGATTTTTCCGTGTCTAA TTCTATTAGCGATGCTTTTATCTTAATATCTCTAAGAATTAAGAATCATG AATTTCGACTTCGAAGTTTTTAAACTTGCTTCGAATTTTGTAACATTTGC TAATAAATGGGCTAATCCCCAAAAATACATGTTTTTTTTATAAGGACAAA CTATATAAGAACATAAGGCTTCGCTGGCCAAAATCTTGAGGCTTTGCGAA CTCTAAAACATCCGATTTCTTAGAGAAATGGACCAAAATACTCACAAAAT GGTGAAAATCAGAACATGTTAAGAACACTTTTAGCCCAAAACTCAAAAAG TTAATAACAACCGAAGGCTTAAAAATTTTAGATGTTCTTATAAAGAAAAC GTGTACCTCTTATGTTGAGAAAGTCATCATGTTCATTATGTTCAAACGCA CCCCTTCCCCCCAATTATTTTGGATTTATAGGTACCACTCCCTTAGATTT GTATCTACATTTTACAAGGCTTACCCTACTTCTTTAACAGTTGACTTTTC AGGCTGTTAAGCAGGGCCCACGCCACCGGTAAGGGATTGCCCACCAATTA TTTCGGATTTATAGGTACCACTCCCTTAGATTCGTATCTACATTTTACAA GGCTTACCCTACTTCTTTAACAGTTGACTTTTCAGGTTGTTAAGCAGGGC CCACGCCACCGGTAAGGGATTGCCCCCCTCCCCCACTTTTTTGCAAAGTA GAAATTTTTGGTTGCGCCTCCTTTGACTCTATATTCGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014303XLOC_014303Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025487-exon-sc0000536-1575043694:176262..176288TCONS_00025487-exon-sc0000536-1575043694:176262..176288Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1575043694:175799..175864TCONS_00025487-exon-sc0000536-1575043694:175799..175864Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1575043694:168604..168653TCONS_00025487-exon-sc0000536-1575043694:168604..168653Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1575043694:167150..168407TCONS_00025487-exon-sc0000536-1575043694:167150..168407Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1510915933:176262..176288TCONS_00025487-exon-sc0000536-1510915933:176262..176288Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1510915933:175799..175864TCONS_00025487-exon-sc0000536-1510915933:175799..175864Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1510915933:168604..168653TCONS_00025487-exon-sc0000536-1510915933:168604..168653Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1510915933:167150..168407TCONS_00025487-exon-sc0000536-1510915933:167150..168407Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1491911889:176262..176288TCONS_00025487-exon-sc0000536-1491911889:176262..176288Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1491911889:175799..175864TCONS_00025487-exon-sc0000536-1491911889:175799..175864Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1491911889:168604..168653TCONS_00025487-exon-sc0000536-1491911889:168604..168653Clytia hemisphaericaexon
TCONS_00025487-exon-sc0000536-1491911889:167150..168407TCONS_00025487-exon-sc0000536-1491911889:167150..168407Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000536supercontigsc0000536:167150..176288 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.4055 12.0844 6.92637 7.01291 16.331 12.9397 11.7008 11.579 8.34853 8.91105 8.68346 6.92717 9.8 10.1083 9.45146 8.87616 10.4639 9.48182 6.68072 6.71434 9.37324 8.24968 18.1164 15.2775 10.225 12.1704 3.85353 4.60545 11.6173 14.3548
Blast
BLAST of TCONS_00025487 vs. Swiss-Prot (Human)
Match: MAP11 (Methionine aminopeptidase 1 OS=Homo sapiens GN=METAP1 PE=1 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 1.187e-34
Identity = 62/84 (73.81%), Postives = 68/84 (80.95%), Query Frame = 3
Query:    3 APNVPHYAKNKAVGIMKPGHVFTIEPMINLGTWQDTLWPDDWTAVTKDGKRSAQFEQTFLVTETGIDILTAR-SNGRPYFMDQL 251
            APNVPHYAKNKAVG+MK GHVFTIEPMI  G WQD  WPD WTAVT+DGKRSAQFE T LVT+TG +ILT R  + RP+FM Q 
Sbjct:  303 APNVPHYAKNKAVGVMKSGHVFTIEPMICEGGWQDETWPDGWTAVTRDGKRSAQFEHTLLVTDTGCEILTRRLDSARPHFMSQF 386          
The following BLAST results are available for this feature:
BLAST of TCONS_00025487 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAP111.187e-3473.81Methionine aminopeptidase 1 OS=Homo sapiens GN=MET... [more]
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