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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025474 ID=TCONS_00025474|Name=TCONS_00025474|organism=Clytia hemisphaerica|type=transcript|length=2867bp GACCTTATTCTCTTTATATGAAGGACTTTTGGtataaaaacatacaaaaa tgAGTAATCGTAATAGAAATAACCTTCCTAACAATCTTGCACAACTACAG AATCTCATCAAAAGAGATCCAGAGTCATACAGGGAAGAATTTCTACAACA ATGGAAACATTTTCAatccaatttggaaattttcaaactggaTCCAACCA GGGAGGCTGAAGCTGTAGAAGATGTCATGAAATTCATTGCCCAGGTTGGC AACTGTTACGAGTCCATCATCGAAGGATTTCCGGAAACATTGATGGATAT ATTGTCACAGCATTATTCAGTCATGAATCCTAACCTCCGAATGAGTATGT GTAAATCTCTGATATTGATGCGAAACAAAAATCTCATCTCACCATTGAAA TTAttggaattatttttcaaacttttaaaagctaaagataaacttttgcg aaagACACTTTATAATCATATTGTGACTGACATCAAAAATGTGAATCAGA AaagcaaaaataacaaaataaatactGTATTGCAAAATTATATGTTTTCA ATGCTGAAAGATAGTAGTCCCATTGCTGCAAAGATTTCAATGGACATTAT GGTCGAGTTGTATCGTAAAAACATTTGGAATGATACGAAAACAGTTAATG TCATTGTTACCGGTTGTTATTCCAAAATCACCAAAGTTATGGTGACtgca ttgaaatttttcttgggAACGGATGCCCCTGAAGAGGTCAAAGCGGATTC TGATTCTGAAAGTGAGGATGACaatgaaaaagccaaaaagCTGATCATTG CTGGCCAAGTCAGCAAGAAAACAGGcaaaaagaaacgaaaaatggaaaaa gcaTTATCGATGTTACGTAAAGCTAAAAAGAAACAGAAGCCAGttagttt caatttttcagctaTACACCTTATCAATGACCCACAAGGTTTTGCTGAGA AGCTTTTCAAACAGTTGGAAAGCTCTACCGAACGATTTGAAGTCAAACTG ATGATGATCAACCTTATAGGACGGCTTGTTGGCATTCATGAGCTGATCCT GTTGAATTTCTACCCgtttttacaaagatttttacaGCCTCATCAAAGAG AAGTTACCAAACTTCTGATGACTTCAGCACAAGCTACACATGATCTAGTT CCGCCTGATGCTATCGAACCAGTATTAAGGACCATTGCCAATAATTTTGT ATCCGAAAAGAATTCTACTGAGGTAATGGCAGTTGGATTGAATGCAATCC GTGAAATATGTGCGCGTAACTCTCTGGCGATGTCAGCAGAATTGCTTCAG GATTTGGTAGAGTACAAAACCACTAAAAGCAAAACAGTAATGATGGCTGC TCGATCTCTCATACAACTATACAGGAATTTTGATTCAACTCTATTACGGA AGAAAGACAGAGGAAAGCCTCAAGAGCCATCCATGATTGGGGAAGAAGTT GGGAGTAAACAATTTGGAGCGAAAACTGCCCTCACTTTTGTGCCAGGTGC TGATCTACTAGACAACGAAACAGAAACAAAGGAgaagacaaagaagaaaa agaaagaagtgAGCGAGGATGGAGAGAAAGACAAGGattctgaaaacgaa agtgaaagtggtaGCGAAGCAGAAGATGAGGACAATGAAGACTGGGAAAC TGATGAAGAAGAAGACGAAGATGTTGGAAGTGATGGTGAAGACAGTGACG GTTGGATAAACGTTTCACATTCTGAAGATGATatggaagaagaagatgaa gaagatgatgAAGATACACAACAAGAAAAAGAGGATGCAAGAGCAAAAGC AGAACAAGTCAGCCAAACCAAATTTCTAACGGACGACGATTTCAAAAAGA TACAGCAGAAAGCTATCTCACAGCAAATTGAAAGTGGGCCAAGTGCAGGT AAGcgaggcaaaaaacgtaaacaaacAACCGCCGCGTCTGGACAAGAAAA AGAGAAGTCGGAACTGGTCGACTTGGCTAGCATAGAGAATGTTGTAAAGA AGATGAAACATGATAAGGAATCAAGACTGGCTACCGTACTCGCTGGTAGA GAAGGCCGCGAGAAGTTCAGTAAACCAAAACAGAAACGACAAAACGAGCA CGCCAGTACCACCAATAAAGAGAAGATCAAATCGAAACCATTTATGATGA TCAGTCACAGTCAAAGATCGCGTGGCAAAGGAAAGAAATCATTCCGCGAT AAACAAATCGCTTTAAGAGATTCAATGCTGAAGAAAGATGGGAAAACTAA GAGCGGAAAAAAAAGGAAGCACTAGTCTATATTTTGAATTGGTGTAAaac aatttttagatttttatatgCCTTTATAATGATCATTTTTAGATATAAAT CAATGACAAATTTATGCTCCTTTTCTAATGTTCTGCCTTTTTCACGTAGG ACTTCAGGTCAGGATGTcgataaaaaaggaaaatagaATCTGATATGGAT AAGAAATTCTTAAATTGAATATCatgcttttttaagttttacgaGCACAG ATTTCGATTAACTATTTTGCAGTTGAATAATGTAACGAAGAACAAACTAC TCCTTTACAAACTACTGATTTAAATGGTATATTCAATATTTAATACCTTT TTCAAGTTATGGAGAATTTGGCGGATGTAAAGATGAATAAGTAAATTGTA TTGGCCTTTTTCGCTAAAATTCCATACATGGATTACCTTCATATTCAAAT CAAATGATAAATTCTAGTCTAATTTGaatattctatcaaaattaggCGAT AATCAGCCACTTTATCCTAATTAGAATATATTATTTCCTGATTAGTTCCT GATTGTTTAATATGTTCGAGcattcaaaaatttcaatattttgtccCCAT TATACCCTCTATATTAG Run BLAST on NCBI transcript from alignment at sc0000536:197541..214465+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025474 ID=TCONS_00025474|Name=TCONS_00025474|organism=Clytia hemisphaerica|type=transcript|length=16925bp|location=Sequence derived from alignment at sc0000536:197541..214465+ (Clytia hemisphaerica) GACCTTATTCTCTTTATATGAAGGACTTTTGGtataaaaacatacaaaaa
tgAGTAATCGTAATAGAAATAACCTTCCTAACAATCTTGCACAACTACAG
AATCTCATCAAAAGAGATCCAGAGTCATACAGGGAAGAATTTCTACAACA
ATGGAAACATTTTCAatccaatttggaaattttcaaactggaTCCAACCA
GGGAGGCTGAAGCTGTAGAAGATGTCATGAAATTCATTGCCCAGGTATAA
ATTGTAGTCAGTTTGAGgctgagaatttttttttagaaatattaatttta
tcatgatgacaaaatgttataaatggtgaaggcttcttcgttaaaagcga
aagacatgtatctatttttcggatccggcatgtAGGAATAGTgcatagtg
tcaggacctgcaggcgacctggtagggttgggtatgggcgtggtttgggt
gtggttacgtatcagattggctaggaatttggttattatcagttagggtt
agggttggagctcgaaaaaagcactcttttgtgattttctcttaatacag
tctggtctacagtttgtacaatataagtAGCCATCAGAAACGCTCTttcg
gcatgaatccgtggcgcagtggatataaggcattgggtttcaaaacatcg
gaactttgcatttagtgggttcgaatcccaccggtggcgatctgtcggta
cacgtgcgtttgcgtagggtaaaatggcgaaatgcgaaaatcgaatttgg
caaaaaaaatttgaaaaaatgaccctacaagatttgactatatcttttta
ttccatgaagagattactttcaaataaaaaatgtattaacaatgaatggt
taagctttctagaaatccaaacataaattgtatAGCTTCTACCAAAatat
agcactttaggatcagaaacagtcaaaaaccagttttttccaattttctt
cgagttacaggaattaattccttgtttgttttgatctgaaattttcagta
ggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNacagaatttcaaaaaatctgttagttc
tggagatatattgaaaagtttagacatgggtagtttgcgttcgtgtttcg
cgttcccaaaccaaacgcacgtgggtaagtcattcagtaagttagaaaac
atagtaaataactcacacagaaccagaaagtcagaaaactacgaacaaga
gactggaaagtacgaaataagtccagatatgtctttcgtctttacaaAGA
AGCCACAACCGTTATAaatccagacccgatcaatcgaacaagtcgaacca
atcaaactaactctttttaacttatttattttattttatcctttatgttt
aaaatcacgaaaatgtacTTATGTATTATGTGATAGTTCAATAGAANcct
gtatttctatttgtgaccccctgtatttcgcgcGGGCTTTTTAATAGATA
AGTCACATGACtgaaatcccgcagtcttattggactagagaaagcgaaag
tgaaatcgcgcgatctgattggatgaaaaaagaccgcgggagctggaaac
gaatgNgaactaatcaaactccatTGAACAATTAACGTAACTTGGTATAA
TGtagacacccctcctctaattccgacaccgtttttatcagctgaaattt
atagaaaggttgaaactgtgtTTCTTTGcatagtggtcagagaggaataa
tcccttttcaatcagtgattcaagctttcataatATTCCTTTCTTTAAGG
AAGGGTGTCAGagttagacgagggatgtcgatattagaccaacttacagt
aaagtttgagtaaaaaaattaatcaaactccagattttttaaaaaatttg
tgagtgttcgattaagttagATCCAGTTTGATCAATGGCAGTATAGACTA
AAACTCATATATCAAGGTTACAGGATTTCGAGTGTGCAGTATAGACTAAA
ACTCATGTCATATATCAAGATTACACAGTCagtcaagaacaagtgcaaat
ATGATACCTTCGGCAATCTCTCCTACTTAGGAGAGTATCTTTTAAactgc
tcaattgaataaaaaagttactttcgaaaagtgctcaaaaacgttaaaaa
ttgacctatcaaattaaacagaagcataattacatgatactgTACATCGg
cattttcgtttcagtcatttaaaatgataattagctgtctaaatgacctt
tagttatataaaggaaggttgaatttcaatgaaaggaggaaaattcgtcg
aaaaaaaacaaaaaatctggtaaaattcataaaaatacatcaaattaaTA
TGGGTTTCCGGGTACATCCAGCTTTTACATTAAAAAGCGCTGGGTTAGTG
CTGGGCCCGTCAGGGAAGGCAAGGCATTGAAAGGCCACATGCGCCAAAAA
GAAGGGCATGTGAAATACAAAAATCTTATTGGTGGAAATTAAATAAATAG
TCCGAAGGAACGCCACAAAGTAATCAGTAGAAACATGGATGTAATAGAAA
TTAGATGGACAGTTAACTTTTTCTCTGTCATTAAAGTTGCattgaaattc
ttttcaaatcgGCTTTCTTTATTATTGAATCATTGTCAGCAAGACAAACT
CATTTCActggaatttttttatattttttNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTACGtcattaaactaaaaatttgaataactcAAAAACTGTTT
ATgatatcaatatgaaattttgacagaacaaatatatcgtaattctctag
atttaaaaattttatcaaatctcctgaaaaataatgacgtcaacgttttt
aagctattttcgatttttggctctaaaaaatgacgtcatcatgccAGAAT
GCCAGAAtgtattgttgtaaagaaaaatagaaaagagatAAGTTTTAGCC
TATCTGAGTGTTCCCTAATCTCTTCATCGTAATTAATTATCAAATTTGCA
ACAAGACTCATTTTGGTACCGGGGggttcaatatttttataaatttccaG
AATTTTTTACTAATTATAAGTTTCTGATAAAGATTTAGTTGACAGGGAAT
GCAGGCAAATTTCAAGGCCTTTTCTGCTACTGGATAACGGTGGCAGAAAC
TCAATCTTtgcttaaattttgaaattcaatcttaATTTTTGTACATGAGC
CATGAGAATGAtgacaaaaatttgatgtccTAGGCCCTTATTAACAGAAA
AAGCCCATTCTGAggttaattctttgtgttttattaATAGTTCCCAACTA
AATTAAACAGAGCCTGGATTGattattttttccttcaaactgaattcaaa
ctcaaaaaaatctgtaaatttGCCTGGGAATGGAAGGGAATTAAACCATA
TCATCTGGTTtcttcaaacaaaatcttttatattttatatatcaTAGGTT
GGCAACTGTTACGAGTCCATCATCGAAGGATTTCCGGAAACATTGATGGA
TATATTGTCACAGCATTATTCAGTCATGAATCCTAACCTCCGAATGAGTA
TGTGTAAATCTCTGATATTGATGCGAAACAAAAATCTCATCTCACCATTG
AAATTAttggaattatttttcaaacttttaaaagctaaagataaactttt
gcgaaagACACTTTATAATCATATTGTGACTGACATCAAAAATGTGAATC
AGAAaagcaaaaataacaaaataaatactGTATTGCAAAATTATATGTTT
TCAATGCTGAAAGATAGTAGTCCCATTGCTGCAAAGATTTCAATGGACAT
TATGGTCGAGTTGTATCGTAAAAACATTTGGAATGATACGAAAACAGTTA
ATGTCATTGTTACCGGTTGTTATTCCAAAATCACCAAAGTTATGGTGACt
gcattgaaatttttcttgggAACGGATGCCCCTGAAGAGGTCAAAGCGGA
TTCTGATTCTGAAAGTGAGGATGACaatgaaaaagccaaaaagCTGATCA
TTGCTGGCCAAGTCAGCAAGAAAACAGGcaaaaagaaacgaaaaatggaa
aaagcaTTATCGATGTTACGTAAAGCTAAAAAGAAACAGAAGCCAGttag
tttcaatttttcagctaTACACCTTATCAATGACCCACAAGGTTTTGCTG
AGAAGCTTTTCAAACAGTTGGAAAGCTCTACCGAACGATTTGAAGTCAAA
CTGATGATGATCAACCTTATAGGACGGCTTGTTGGCATTCATGAGCTGAT
CCTGTTGAATTTCTACCCgtttttacaaagatttttacaGCCTCATCAAA
GAGAAGTTACCAAACTTCTGATGACTTCAGCACAAGCTACACATGATCTA
GTTCCGCCTGATGCTATCGAACCAGTATTAAGGACCATTGCCAATAATTT
TGTATCCGAAAAGAATTCTACTGAGGTAATTTTATTGCTTATTAGGCATG
GGTAACTTATTGGCCCTTTTTGCGCATGCCCCTTTTTTAGGCTGGGCATT
ATTACAgaaaagctcaatttttttcaattttcagccCGACCCTGATTTAA
TTCCGATGCCTTACGTTGACCCTTATTTTACAAGGGACGAAAAAATGGCG
CCAATGTAAGAGCTAGCGTGTAATGTATGCTGAGCTCTTAGATTTCTTCA
TAACACTAGTTATGTGTTAAAAGAAATATGTCAGCTCAATCCAATAAATT
CTCTTTGCGGTAAAAGAACATTGGTATGAAGAAATGCTTTACAATTGCAg
taaattgaatttttgaaatgatttttctGTCAGTCTAACGGTGACTCTAA
CTACGAGGGTCGAAATATCGCATTAGAATTGTTTTAAAGAGCAACCATAA
AAACGTGTTTAAAAAtgattgtattgttgtaaaaaatgaagaagcttagt
tgtttgataaaaaaaattcaacataatATCCACCCATTCATTTCTAGGTA
ATGGCAGTTGGATTGAATGCAATCCGTGAAATATGTGCGCGTAACTCTCT
GGCGATGTCAGCAGAATTGCTTCAGGATTTGGTAGAGTACAAAACCACTA
AAAGCAAAACAGTAATGATGGCTGCTCGATCTCTCATACAACTATACAGG
AATTTTGATTCAACTCTATTACGGAAGAAAGACAGAGGTTTGTTTTAGTA
TTAGTATTTTATTTGTTATTATATATTTAATGAACAATGAAATTCCAAAA
TCCGCAAAAATTACAGAGAGTTTCAAGTTAAAAAGTATCATTAGAATTTA
ATGTTTCTATGTTTTTAGGCAAATGCCCGGGGGgcgggcactgaccttga
cggccgactgggacgtgccgctggagctCGAGAATTTTACCCTGTCAGAT
Aagaatttttggtaaaaaggtgaacctgtcagaacgaaaaataaattttt
ttccaatttccacCCTaacaagtggcaaaaatgactaaagtagacaaaaa
actgaaaaaatgccTAATTTTTACGCCTAAAAAAGGTACcttgaccagcg
gcacgtcccgtACCAAGCTTTGCCTAAGTTGCCCTCCCGGGGGAAAACGT
TTGAGCCTTTTCTGAGCTTTCTTCGAAAGTTATAGTTACCAAGGGCTATC
GAAATGATGGGTCGGATATTGGACATTGTCCGAACTGAATAGCTCcttgt
ccgacccaaaaataTCATAATCTGCAAGCAAAAACAACCCTGATCTGACC
CACTAGCAATCctacccctctagaaactatacTAACATTCAACATTAATT
ATTACTTGACATAGACGATCTAATTGTCGtaacattttttttctacagGA
AAGCCTCAAGAGCCATCCATGATTGGGGAAGAAGTTGGGAGTAAACAATT
TGGAGCGAAAACTGCCCTCACTTTTGTGCCAGGTGCTGATCTACTAGACA
ACGAAACAGGTATTTATTATTAATTTACTTTCATTGGACTACATTAATGT
TTCTTTTTGAATGTATTCcggtttatcgttctacatctctAATTTGAGCT
TTCCTTAGCTCATTTGATgtcaatcgatacttcgattGAGAGAgaactct
ctaccttcactcgtATATCATTTCCTTTTGAAGACTGTTTCCCATCCACT
GATTTCTAACTATTTGACTAAATtggatttcaaatttaaaagaatATAAA
AGGAAGCGTCACCAGTCCTTACTAGTCCGCCATCTAGTCTGTTGTCGATT
CTGGTGATCAACAATGGCGCAATTAAGATGCTTTGAAttcttcaaaaatc
gaagtCAAATTAGAAAAGAACCCGGTAAACTACATGATCGAATCCCGACT
GGGCACCCTTCCCCGAGAAATCTGCAAGCAGTTAGTTCATCTAGTGTGTA
CAGAGATAAATGATACCAGTGATTCCATTATTAGACATTTAATGTTTTAC
TCTAAATAAAATTACGAAAAATTGAGACAAATGACAAATATTAATACGTA
AAACAAACTGAAAAAAGTGGCGAATCTTATTGACAGAATATTAACTAAAA
ATAGGCTGTAAAAAAGTAAGGTaaataactcaaaaaaaattgacaacctA
ATCCTAGCTTCGGGAGACATAGGTGCCTGAGCAaagatttattgataaaa
aaatgatgaaaaagaaaacctgCCAGGTGGTAAAGTGAATGAAAACTAcc
caaaaataacaaaatcaaaaaattgtattGAATTCCAACAAGGAACAATC
AAGCTCGTTGAAGAACCATGTCTCTGTTTATAGTgtgttccaggtcccac
ctaaaaattcaggtcccacctaaccctaaaattcccaccctcaatccaga
ctcccagatcccagctccAATATATCGCTGATGAACTTCCATGTGGTATT
TTGTGCTCAGTTCGACGATGGATAATTATTTGGTCTCTATAAATTCACCA
TTGATGGATGAAATGACGTTGACGTATATGCCAAGATCCCATGATTGTTT
TGTGGAATTTCTAGAAACTAAAAATCGGAAATTCGATTTAAAGTCCCTAT
TGATATCTAAAAacctatcaaaatttgaagttagaTGGATAgctatatca
aaagttatgctaattttaagattttaggattttacacggttttagctgga
tttcaTGGCATGTCTTCTCAAAAGAAGCCATAAAACAGTATTTAATAAAA
AAGTGCCAGGGTGGTGGCAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaaattgacaac
ctAATCCTAGCTTCGGGAGACATAGGTGCCTGAGCAaagatttattgata
aaaaaatgatgaaaaagaaaacctgCCAGGTGGTAAAGTGAATGAAAACT
AcccaaaaataacaaaatcaaaaaattgtattGAATTCCAACAAGGAACA
ATCAAGCTCGTTGAAGAACCATGTCTCTGTTTATAGTgtgttccaggtcc
cacctaaaaattcaggtcccacctaaccctaaaattcccaccctcaatcc
agactcccagatcccagctccAATATATCGCTGATGAACTTCCATGTGGT
ATTTTGTGCTCAGTTCGACGATGGATAATTATTTGGTCTCTATAAATTCA
CCATTGATGGATGAAATGACGTTGACGTATATGCCAAGATCCCATGATTG
TTTTGTGGAATTTCTAGAAACTAAAAATCGGAAATTCGATTTAAAGTCCC
TATTGATATCTAAAAacctatcaaaatttgaagttagaTGGATAgctata
tcaaaagttatgctaattttaagattttaggattttacacggttttagct
ggatttcaTGGCATGTCTTCTCAAAAGAAGCCATAAAACAGTATTTAATA
AAAAAGTGCCCGGGTGGTGGcaaccccccccctgataaacgTCACATAAT
TTGCGGGTATATAAAGAAACCGGACTCGTAAATGTTTGACGTTGATTGTC
CTGTTCGTTGTATCACCGCAGAATTTTTTGGATCcccaaattttgttaaa
aagctTATTATTATGCAAGAGAACCACAAGTGTCCTGCAATTTGCCAAAA
ATAGTTCGcggtaaaattttattatttcgtCAGATGCCAAATTTATTCTT
TCCTTTTCGCCAAGATTAGTTCCCTTGAAGAATTTTACCTTGTTTTCTGC
TTTGCCAACAATAGTACCAAAAAACAGACAAGAGACAGAAAGAGACAAGC
CAAGAACCTCATTCTCGTTGAGGATGTTACCTAAGACTTTGttaaactgt
ttggaaaaaataaaaatcgttTATACACAGATAAGAAATCAGATCGTCTC
GAAAAATTAAAATGCAAGAAGGTGCTTTCAACTCCTTATTGGACCAAaaa
ttaggcaaatttgggccaaaaactcagaaaaaggtaattttttgtcaatt
ttgttaTGTAAAAGTTGCTTAAATGCACGTTATAGGCCTGAAAACTGCCA
TTCATTTCAAGGACGTGACGTCGCTTCTTTTTTGGAATTGTTTATATAAC
ATatgtcaatttttttggcaGACCTCGTTTTATCGATTCTAATTAAATAT
TGAAAGATATCTGTAACTGCAGGAGAGCCGGACGTGATACTTTACGGTTT
CGGACGGTAATATATTTTGCTAAAATAGATAAAGGTACAGTTCTTAAGTA
CAAATCAAACCTGAGAGGTGAATAATATGTCAATATAAGGCTCAATAAAT
CAAGATACAATATAGAGCTACAATATAAAAGAACAACATTAAGATAAAGG
AAATACTACTTACTAAACACGTTGGTCCCATAAGCTCTAATGCAGtgaga
tatatatatatataaatattcTTTATTATTCTTCTGGGCGTCTCTTCAGA
CTATAAGTTTTACAATTCTGGTTTTCTGTTTCGACATTGTAACTCTGTAT
TCACTCTACAGTGATCTTTGTTCATCTGAACGCAAAAGTAGAAACAGAGC
ACAGAAAAAGGCACACAAAGTCCCGTGGGACAGACGCTAGACAAAGAGAA
ACACACGAAGGAGAGCAAGCCTAAGGGAATACGAGTCACATAATTACGTA
ATAATTGACAAATAAATAGACAATACACCGACGATCAAATtaacataaaa
atatacaaaacaacTGCTATTCGGCAGTTACAATATCTTTCATCACTTCT
GTAGTGCactcttttaatttttgtgaagaaagatatcttttaatatttta
cttggctctggttttcattgagcactctgcaacatcaatcacaaacaaTA
CTTTATCGATTCTAATATACATTTTGATTGATTGTTCTCTTTTTTGCTGA
ACTGAATCGACGTCTGGAAATTTCTTTCAGCTGATTTGGTAAACACGGCT
GTCAATCTATTTACAGGGGTATTCATTTATTGAATCTTGCTGAATCTTTT
GAAAAGGAGACTAATACAGTAGAATTAGTGCAAAAGATGAgattttcaaa
aaccttttcCCAAAATTGAATAAGCGGGGGGGAGGGGAAATGTCctgagt
ggaaaattttcgaaaaacaattttgtgagtatttttttcaattttccaaa
aaatcagcTGTTTGGCCCgcaaagcctgaaaatgttcctaatttgttgat
atttttgcaATCGAatccttatgctcttatataggctgttcttataaaaa
aacgtgtatctgaaTTATCATTAGCTGTTTCTCCGTCCATCTGACTCGAT
TGATATTTCAGAAACTTCAAAATGGGCTAATACATAGATACCATTATATC
CATATAGGGGTTCGACGAAACttttcaaaccaaaaaaatattattgaagt
TGTGCGAACATCCCctggaaaatttgcaaaataacccGGGAGAAAAGGGT
TTTCTTTCCTTTGGAAAAATTATACTACTTACTGTAAAGTTTGAGTTGAA
GAACTGAAGTTAATtatctactctcgggtacctaattatgttttgagatt
tttttactCCTGGAAATTTTTATGATGAACAGTACTTTGCCGtataattt
ctttggaaaaaaattacaattcacATACAAACTCATATCAAACTACCTGG
AAAATGCTTAGACTTGGATTTTGTTATTCGgggaccccctggaaatgttc
atccatgtatggatataaaatggaatgaccaATATTAATTACTGTAGAGA
GTCTTGTGTCGTTCTACATATACACTTTTTTGTAAGAGCaataatgaggc
tcaaaatcgccaaaaaaataagaataatttaagaacaatgctgagcctga
atgACTCAATTTCAATGGTTTCGTTTTTTGCTGctttatgaaaaataata
gGCACTTTCCGCAACCACAACGAGTACAACAACGAGAACgtgaaaacatc
aaattcacaCCTTTGAGCTGTCAAAACTTGTCAAAACTCTGAGTAAACCC
CAATTAACCGTTTTCTCTTCTCGTGCCCGACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCAAAAAGtaag
acaattttgaaaattatatttcagaatctttaaactttttatcttttttt
agctttttttcttgtgctAGACGTGTAAGTTTAAagtattgaatttttga
aatcctgattttaaatttgttcaGTTTGTTAATCTCGTTACTAATAACAT
TACAAAATAATTCTGATCATTACAGTATTTTTAGTTTgcattgaaaatga
aaagcatcgagattttctccaggtttttcgtttttcgttactttaaaaaa
aatgatagaCGTTCTCgttgtgaaaaataattgcGGAATTAAAAATGAGC
CACAACGGCaacttctctattttttcaCACCTATATGTTATTTCACAAGT
TTTGCCGTTGTCGTTGCCGTTCTCGTTGTGACTGCGGAAAGTGCCTAATG
CTCTGTGAagctgatttttttgtttttaatgacATATCGGAAGTTGATTT
CTTCATCAACATGAAAAAAACACCTTCTCACCATTCTCCTTGAGGAAATT
CTGTAGTCgtacacagcatttttaggtttaTAGTACCGtaattcaaacta
gatttaacatttgaTACATACGTCTAaagcaaaaaatagcatttttgtga
aagtagcgagccttacttggggtaatttgcaatttataatttataaggCT
TgctactttcacaaaaatgctgTTTTTTGCTTTAGACGATGCTGGTGATA
TACTaagcatattcttaattctGTGGCCGATTTCAtcttgaatattctta
taagggatcctcgacaaaaaactttcgaattttttatcggcattgggccg
ataagggggtgggggggtccaactacataccgataaaaaaacGAGTATTG
GGACGAAAatcttttcagccaatttcttaatgatttcgtccacaaactcc
actgaaagcatacaatttcacttgctttcaccttcGCGCACAAATTCGca
actttaaaagtacagttttgaattagctttgataaaaaaactcttttttc
attggccagcgTGCTGCCGTTTCCTTCGAAATGTTGCGACTTTATCGCGT
CTTTTTATCTttcgttttgattaacaatatcaatgcgggtataaacaaac
tcaatgttggtgcaaATAGACAAAAACTCAACGAAGACGGGTGGGAAGGC
GAGATCAACGCAATGGCGGACatgattggaaaaaattgtgttttcgaaga
tgtaaaagttggtttcaaaaaattttggccgataagagcaaggggggagg
gggtctgaagcttatcggcccaatgccgataaaaaattcgaaagtttttt
gtcgaagacccctaaagtattttctcataaaaaagtgtttaaaagaCGTT
AAAAGTTCTAACTAGTTCCGTACCCTAGGTAAGCTTCTTACATCGTCTAC
TTCTTATTCATTCTGTTTTCGTTTCTTTTCTCACAGAAACAAAGGAgaag
acaaagaagaaaaagaaagaagtgAGCGAGGATGGAGAGAAAGACAAGGa
ttctgaaaacgaaagtgaaagtggtaGCGAAGCAGAAGATGAGGACAATG
AAGACTGGGAAACTGATGAAGAAGAAGGTGAGAGGGGTCGAACTTACTAA
GGTTCATTACCGTGATAAGATGTAAAAAATACCGTAAGATGTGTGACCAT
TATCAATTATCAATATGCGAATGGGTTATGGGAAATCATTTGTCGAAAAA
TATGTGTTGAACAAATTATACAAATTTATGTGCATTTACAAAAACGTGCC
CGGGAAAgtttaaaatttcgtttttgtcAGTTGATAAGAAACCGAGGTTT
ACTTGTACTAAGCcagatattcagtcacaacttaccatcagattttacta
agtgactgaatcaatctggcttagatttctaggctttATAAATGTGTGAT
ATCAATCGTAAATATGAATGATTTCCcctttctcttttattttcattcgt
TGTTTGTTCTAACAATGTTCTAACGATGTTTTTGCTTATTGATCGCAGAC
ATTTTTATATCTATATAAAattgaaagagagaaaaaaatcaagagtgtaa
gaaaaatgtaaaattgtgagaaaaaaaaattttgtggcCGGCAGGGTGAG
TTTTTTTTCATCACCCGCGTTTCTGgaaacaagattttttttttttttgg
cctaaGGGAATGGTCAAACTGACTAAAGTTTATTATGGTAAGATGCTACT
CTCTGAAACGGCCTAAAACTACCGCGTGAGATGTGTGACCATTTTGATTT
TGCCAGAATGAGGAatttattaagaaaaaggtGAGGTTTATATCTAACTT
CAGATCATTTTCATGGGAATGCCGCTCTTTGAAAGTCATGAAGAATTTCA
TAAACGACACTGTACTATTCATTGCGCTCCCTTTTGCGATCCAAATCCAG
CTCTCTATGAAAATCGAATTACAGAGCGTTTGTTAAAAAAGGAAATAGAC
GAACTAACTGAAATTTTATCATGATAAGATGCTGCTCTGTATTGAATTTT
ATAGACCGTAgtatgaaggtagagcatccagctacggtgcgcaggGTTGT
GGGTtggggtcataccaaagattcccaaaatggtacttcaTAACTCTCTG
CTTTAATGCTCATCACCTACAGAGacgtggagaaatccagggaaatgATT
AGCGCCCTCCCCTACTTCCGCGTAGATAGTTtgagaaaagggagccttcg
agTTGCTCTCGACTGCGGTTGCAAACTTATTGTATGAATATCATTCCCCG
CGATTTCTTTGTAGACGAAGATGTTGGAAGTGATGGTGAAGACAGTGACG
GTTGGATAAACGTTTCACATTCTGAAGATGATatggaagaagaagatgaa
gaagatgatgAAGATACACAACAAGAAAAAGGTTTGACTCTAGGGAAAAG
CTCACTTTCAGAGGGAAAGAACAACAAGAAAAGAGTTTGACTCTGGTGAA
AAGCTCACTTTCATGGAAAGATTACTCTAGAAAATATGGAAATGATTTAC
ACTAGGGAAAGTATATCGCAACAACACAATAAGAAAAGGGTTTGACTCTT
GGGAAAAGCTCACTTTCACGGAACGGCTACTCCAGAAGACACAACAGGAA
AATATGTGACTCTAGGGAAAAGCTCACTTTGATAAATCAATATGTCAAAG
GATTTACATTTAAATTTATTCCATAAGAAAAAGGTTTGACTCTTAGGAAA
AGCTCACTTTCACGGCACGGCTACTCCAGAAGACACAACAGGAAAATATG
TGACTCTAGGGAAAAGCTCACTTTCACGGCACGGCTACTCCAGAAGACAC
AACAGGAAAATATGTGACTCTAGGGAAAAGCTCACTTTCACGGCACGGCT
ACTCCAGAAGACACAACAGGAAAATATGTGACTCTAGGGAAAAGCTCACT
TTCACGGCACGGCTACTCCAGAAGACACAACAGGAAAATATGTGACTCTA
GGGAAAAGCTCACTTTCACGGCACGGCTACTCCAGAAGACACAACAGGAA
AATATGTGACTCTAGGGAAAAGCTCACTTTCACGGCACGGCTACTCCAGA
AGACACAACAGGAAAATATGTGACTCTAGGGAAAAGCTCACTTTGATAAA
TCAATATGTCAAAGGATTTACATTTAAATTTATTCCATAAGAAAAAGGTT
TGACTCTTAGGAAAAGCTCACTTTCAGGGAACGGCTACTCTAGAAgacac
aacaaaaaaatatttgactctGGGGaaagggacaagctggagtttttaca
agctcttatttgatttggttggttggtcgttaaccagtcataaaacaatt
ttgttactttttctaaagaacgcgtcatctctatcacttcaaatgaccaa
ttagtgaagtatctttaAACCTCCAGCTCATCCCTGGGGAAAAGCTCACT
TTGATAAATCAATATTTCAAAGggtataataaaaaaatgataatcTTGTT
GCTGCCCATTGATTTGTTGGCTGCTTCCCATTCATGTATGTCTttttcaa
atggtaaaaaacgAACCCATGAGGCTCATTCTTTTAAGTAACCAAGTTGT
TTGACGAACCAATACAGTGAGTAAGCTTGCTAACTCGCTTGCTAACTCGG
TTTTCATTCAAATATGTATATACCTTATTGGGGGGAAAAAtttcggggga
aagtgacgaaaattttgagggcgtgacgaaattttcccccgatgaatttt
ttccccgatattttatcacccgaccaaaacttttacccgatttttttatc
cccgaccaaaacttttacccaatttttaaaccccaaccaaaattaaaatc
taaattttttacacctttattaaacgaaattagtgctttaaacgtcgaat
tacaagatctttttNtttaaaccccaaccaaaattaaaatcaaaattttc
acatttttattaaccgaaattagtgctttaaacgtcgaattaaaagatat
tttttcgagctagtaaaggaaaccatttcatttggacaatttagttcgGT
GAAAGttactaaattgtaaatttggtcggggaaaagtgacgaatttgaaa
tttttattgggggaaagtgacgaaaatgcctctaggtgacgaaatttttc
cccgacgaaaaaaaaaccctaCTAAATAAAACACCCTACTAAataaaact
ctgacattttttccccgataaggtatgggcttttccagaaatagtccgtg
ccctccctgttgaggatatcggatatccagggggttaacgatttttgttc
aaaagtggatatccagggggttaaatatctacaagggagcggatatccag
ggggtaaagtgtcttttcaagtaaacatacgatatccaggggtaagcatc
tttataagagaggatatcaaGGGAGtagagcatatttttaagagtggata
tccagggggtctttactattaaagtaggatatccagggggttcaatattt
tgaaaaatcaatatcctcaacagtgggagtaatatttctttctggaaaag
cccaatgcatGTATCTCAACTTTATCATAATCAATTCAGAGGATGCAAGA
GCAAAAGCAGAACAAGTCAGCCAAACCAAATTTCTAACGGACGACGATTT
CAAAAAGATACAGCAGAAAGCTATCTCACAGCAAATTGAAAGTGGGCCAA
GTGCAGGTAAGcgaggcaaaaaacgtaaacaaacAACCGCCGCGTCTGGA
CAAGAAAAAGAGAAGTCGGAACTGGTCGACTTGGCTAGCATAGAGAATGT
TGTAAAGAAGATGAAACATGATAAGGAATCAAGACTGGCTACCGTACTCG
CTGGTAGAGAAGGCCGCGAGAAGTTCAGTAAACCAAAACAGAAACGACAA
AACGAGCACGCCAGTACCACCAATAAAGAGAAGATCAAATCGAAACCATT
TATGATGATCAGTCACAGTCAAAGATCGCGTGGCAAAGGAAAGAAATCAT
TCCGCGATAAACAAATCGCTTTAAGAGATTCAATGCTGAAGAAAGATGGG
AAAACTAAGAGCGGAAAAAAAAGGAAGCACTAGTCTATATTTTGAATTGG
TGTAAaacaatttttagatttttatatgCCTTTATAATGATCATTTTTAG
ATATAAATCAATGACAAATTTATGCTCCTTTTCTAATGTTCTGCCTTTTT
CACGTAGGACTTCAGGTCAGGATGTcgataaaaaaggaaaatagaATCTG
ATATGGATAAGAAATTCTTAAATTGAATATCatgcttttttaagttttac
gaGCACAGATTTCGATTAACTATTTTGCAGTTGAATAATGTAACGAAGAA
CAAACTACTCCTTTACAAACTACTGATTTAAATGGTATATTCAATATTTA
ATACCTTTTTCAAGTTATGGAGAATTTGGCGGATGTAAAGATGAATAAGT
AAATTGTATTGGCCTTTTTCGCTAAAATTCCATACATGGATTACCTTCAT
ATTCAAATCAAATGATAAATTCTAGTCTAATTTGaatattctatcaaaat
taggCGATAATCAGCCACTTTATCCTAATTAGAATATATTATTTCCTGAT
TAGTTCCTGATTGTTTAATATGTTCGAGcattcaaaaatttcaatatttt
gtccCCATTATACCCTCTATATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
| TCONS_00025474-exon-sc0000536-1491911889:197541..197784 | TCONS_00025474-exon-sc0000536-1491911889:197541..197784 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:197541..197784 | TCONS_00025474-exon-sc0000536-1510915933:197541..197784 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:197541..197784 | TCONS_00025474-exon-sc0000536-1575043694:197541..197784 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1491911889:200988..201965 | TCONS_00025474-exon-sc0000536-1491911889:200988..201965 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:200988..201965 | TCONS_00025474-exon-sc0000536-1510915933:200988..201965 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:200988..201965 | TCONS_00025474-exon-sc0000536-1575043694:200988..201965 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1491911889:202488..202677 | TCONS_00025474-exon-sc0000536-1491911889:202488..202677 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:202488..202677 | TCONS_00025474-exon-sc0000536-1510915933:202488..202677 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:202488..202677 | TCONS_00025474-exon-sc0000536-1575043694:202488..202677 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1491911889:203339..203449 | TCONS_00025474-exon-sc0000536-1491911889:203339..203449 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:203339..203449 | TCONS_00025474-exon-sc0000536-1510915933:203339..203449 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:203339..203449 | TCONS_00025474-exon-sc0000536-1575043694:203339..203449 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1491911889:209777..209917 | TCONS_00025474-exon-sc0000536-1491911889:209777..209917 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:209777..209917 | TCONS_00025474-exon-sc0000536-1510915933:209777..209917 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:209777..209917 | TCONS_00025474-exon-sc0000536-1575043694:209777..209917 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1491911889:211105..211221 | TCONS_00025474-exon-sc0000536-1491911889:211105..211221 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:211105..211221 | TCONS_00025474-exon-sc0000536-1510915933:211105..211221 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:211105..211221 | TCONS_00025474-exon-sc0000536-1575043694:211105..211221 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1491911889:213380..214465 | TCONS_00025474-exon-sc0000536-1491911889:213380..214465 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1510915933:213380..214465 | TCONS_00025474-exon-sc0000536-1510915933:213380..214465 | Clytia hemisphaerica | exon |
| TCONS_00025474-exon-sc0000536-1575043694:213380..214465 | TCONS_00025474-exon-sc0000536-1575043694:213380..214465 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000536 | supercontig | sc0000536:197541..214465 + |
Blast
BLAST of TCONS_00025474 vs. Swiss-Prot (Human)
Match: SDA1 (Protein SDA1 homolog OS=Homo sapiens GN=SDAD1 PE=1 SV=3) HSP 1 Score: 506.523 bits (1303), Expect = 2.812e-166 Identity = 281/468 (60.04%), Postives = 371/468 (79.27%), Query Frame = 2
Query: 107 IKRDPESYREEFLQQWKHFQSNLEIFKLDPTREAEAVEDVMKFIAQVGNCYESIIEGFPETLMDILSQHYSVMNPNLRMSMCKSLILMRNKNLISPXXXXXXXXXXXXXXXXXXXXXXYNHIVTDIKNVNQKSKNNKINTVLQNYMFSMLKDSSPIAAKISMDIMVELYRKNIWNDTKTVNVIVTGCYSKITKVMVTALKFFLGTDAPXXXXXXXXXXXXXXXXXXXXLIIAGQVSXXXXXXXXXXXXALSMLRKAKKKQKPVSFNFSAIHLINDPQGFAEKLFKQLESSTERFEVKLMMINLIGRLVGIHELILLNFYPFLQRFLQPHQREVTKLLMTSAQATHDLVPPDAIEPVLRTIANNFVSEKNSTEVMAVGLNAIREICARNSLAMSAELLQDLVEYKTTKSKTVMMAARSLIQLYRNFDSTLLRKKDRGKPQEPSMIGEEVGSKQFGAKTALTFVPGADLL 1510
IKRDP +Y EEFLQQ+ H++SN+EIFKL P + ++ + +++ F+AQ+ +CY + FP+ + D+LS +++V++P+LRM+ CK+LIL+RNKNLI+P LLELFF+L + DKLLRKTLY HIVTDIKN+N K KNNK+N VLQN+M++ML+DS+ AAK+S+D+M+ELYR+NIWND KTVNVI T C+SK+TK++V AL FFLG D E+ K DSDSESEDD A+ L++ KK+ K K+K+EKA+ +L+K KKK+KP FNFSAIHLI+DPQ FAEKL KQLE ERFEVK+M++NLI RLVGIHEL L NFYPFLQRFLQPHQREVTK+L+ +AQA+H LVPP+ I+ +L T+ANNFV++KNS EVM VG+NAI+EI AR LAM+ ELLQDL +YKT K K VMM+AR+LI L+R + +L+KK RGKP E S+ E +++G A ++PGA++L
Sbjct: 20 IKRDPPAYIEEFLQQYNHYKSNVEIFKLQPNKPSKELAELVMFMAQISHCYPEYLSNFPQEVKDLLSCNHTVLDPDLRMTFCKALILLRNKNLINPSSLLELFFELFRCHDKLLRKTLYTHIVTDIKNINAKHKNNKVNVVLQNFMYTMLRDSNATAAKMSLDVMIELYRRNIWNDAKTVNVITTACFSKVTKILVAALTFFLGKD--EDEKQDSDSESEDDGPTARDLLVQYATGKKSSKNKKKLEKAMKVLKKQKKKKKPEVFNFSAIHLIHDPQDFAEKLLKQLECCKERFEVKMMLMNLISRLVGIHELFLFNFYPFLQRFLQPHQREVTKILLFAAQASHHLVPPEIIQSLLMTVANNFVTDKNSGEVMTVGINAIKEITARCPLAMTEELLQDLAQYKTHKDKNVMMSARTLIHLFRTLNPQMLQKKFRGKPTEASI---EARVQEYGELDAKDYIPGAEVL 482 HSP 2 Score: 105.531 bits (262), Expect = 3.816e-23 Identity = 72/176 (40.91%), Postives = 112/176 (63.64%), Query Frame = 2
Query: 1703 WINVSHSXXXXXXXXXXXXXXXXXXXXXARAKAEQVSQTKFLTDDDFXXXXXXXXXXXXESGPSAGKRGKKRKQTTAASGQEKEKSELVDLASIENVVKKMKHDKESRLATVLAGREGREKFSKPKQKRQNEHASTTNKEKIKSKPFMMISHSQRSRGKGKKSFRDKQIALRDSML 2230
WI+V HS D+ ++E + E+ A+A A +S ++ LT +DF+KI+ + +++++ P + +KRK S +E + EL+ L IE + KK K DKE+RLAT +AG+ R++F + K K N +S+TNKEK K K FMM+ +SQ R K K+SFR+KQ+ALRD++L
Sbjct: 512 WIDVQHSSDEEQQEISKKLNSMPMEERKAKAAA--ISTSRVLTQEDFQKIRMAQMRKELDAAPG---KSQKRKYIEIDSDEEP-RGELLSLRDIERLHKKPKSDKETRLATAMAGKTDRKEFVRKKTK-TNPFSSSTNKEKKKQKNFMMMRYSQNVRSKNKRSFREKQLALRDALL 680
The following BLAST results are available for this feature:
|