TCONS_00025409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025409
Unique NameTCONS_00025409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025409 ID=TCONS_00025409|Name=TCONS_00025409|organism=Clytia hemisphaerica|type=transcript|length=118bp
GATTCAAACTCAATActtgacatgaaaaatatctgctgAGGTTCTTTTTC
CCTCGACAAACAGAGGCGTGGTTCACCAAGAATCTTACCTGAACACTTTG
CTCGAACCTACATAAGTA
Run BLAST on NCBI

transcript from alignment at sc0000533:141361..141478

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025409 ID=TCONS_00025409|Name=TCONS_00025409|organism=Clytia hemisphaerica|type=transcript|length=118bp|location=Sequence derived from alignment at sc0000533:141361..141478 (Clytia hemisphaerica)
TACTTATGTAGGTTCGAGCAAAGTGTTCAGGTAAGATTCTTGGTGAACCA
CGCCTCTGTTTGTCGAGGGAAAAAGAACCTcagcagatatttttcatgtc
aagTATTGAGTTTGAATC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014270XLOC_014270Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025409-exon-sc0000533-1491911889:141361..141478TCONS_00025409-exon-sc0000533-1491911889:141361..141478Clytia hemisphaericaexon
TCONS_00025409-exon-sc0000533-1510915933:141361..141478TCONS_00025409-exon-sc0000533-1510915933:141361..141478Clytia hemisphaericaexon
TCONS_00025409-exon-sc0000533-1575043694:141361..141478TCONS_00025409-exon-sc0000533-1575043694:141361..141478Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000533supercontigsc0000533:141361..141478 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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