TCONS_00025368 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025368
Unique NameTCONS_00025368
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length102

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025368 ID=TCONS_00025368|Name=TCONS_00025368|organism=Clytia hemisphaerica|type=transcript|length=102bp
CCTTTATATACTGTGACAGGGATCCTCGATCCTCTCCTTTTAGTAAGAGT
TTCATTTTTGTTCTCTTCAATAATCCCAACGTTAATTTGTACTTCCTCTG
TT
Run BLAST on NCBI

transcript from alignment at sc0000532:123977..124078

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025368 ID=TCONS_00025368|Name=TCONS_00025368|organism=Clytia hemisphaerica|type=transcript|length=102bp|location=Sequence derived from alignment at sc0000532:123977..124078 (Clytia hemisphaerica)
AACAGAGGAAGTACAAATTAACGTTGGGATTATTGAAGAGAACAAAAATG
AAACTCTTACTAAAAGGAGAGGATCGAGGATCCCTGTCACAGTATATAAA
GG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014241XLOC_014241Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025368-exon-sc0000532-1491911889:123977..124078TCONS_00025368-exon-sc0000532-1491911889:123977..124078Clytia hemisphaericaexon
TCONS_00025368-exon-sc0000532-1510915933:123977..124078TCONS_00025368-exon-sc0000532-1510915933:123977..124078Clytia hemisphaericaexon
TCONS_00025368-exon-sc0000532-1575043694:123977..124078TCONS_00025368-exon-sc0000532-1575043694:123977..124078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000532supercontigsc0000532:123977..124078 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025368 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top