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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025364 ID=TCONS_00025364|Name=TCONS_00025364|organism=Clytia hemisphaerica|type=transcript|length=2248bp
AAAAATCTACTCATCATCTGACCGATGGTTGGGATCCTAGCTTTTTTTAC
TAGGCAAAGTCTTGctctagggcttcctcttacacACCAGACGAAATCAA
CATTGTTTCCTTAATTCAAGTTCTTGGCTTCTTGACACTTTTCTTTGATT
CTTTTCCTTATGCTAAGGCCCAGCCAGTTTTGATAGGGTTTCAGCTTATG
TAGATTCTGCATTATTTGTTCTTTTTCACTGGTACTTTTTAAGATCATCT
TCAtctgttatttttaaaatagcGTGTATTTGAAACAGCTTGTTTTGACA
CTGCTTTTATCAATTTCTAATCTCTCGTGTTTATTGatgtgaaaaagggt
aacttttGTCACtggagggtaacttgcattGCCTAAAAACAGCAGACCTT
TCTGGTTTGCATTTTATAATGAAGTTAGAAAGTTAATAAAACTATGTTTT
TTGACTTGATATATGCTACAATTTGATGACTAGAACGATCTGCTATGTTG
ATGCAATTTAAATTTCCCTCAAagtttaccctttttcacggtatatATCA
ATTGTTACTGTTAACATTatcaaatcttttcttttctctttagtGAAAAT
AACTGTATGTACtgataaaaatgtcaaataacaGAGAAAAATGGTTGGCA
TATAATAAAAATGtggcaaaaagaaagaaaggagAGGATACAAAGAATGG
TAAAAAGGCACAAAAATTGTCTTCCATCATTGTGCACCGAATGAAACCAA
TTCCAGAAGGAAAGCTGTTGAAATTTGAACCTCAGCAGCCTAgagatttt
ataaatttttcaaactaccaaggtttaactttgaaaaatgtcaagtTAGC
TTGTGAACAATTTTATGGTGAGCAACCTGGATCCTGTGATGTACTTTTTT
CTAAAGAGGGTCCAAGTTGTGACTTGGACGAACAAATTGTGGGCAAAAAG
GTTATTctcatcagatttatccaaccCTCTGCTGTTACAACAAAAATAAC
ATCTCAAAACTTACCCTCCAAAAATATATCTTCATCAGTTGCAGGTTCAA
GCAAATCTagcaatatttcaaaaagaagaCGTGTCTCTAATTCCAAAATG
AACATTCAACAGAAAACTGCTAATCCCTCACAACAGTTTCCTAGATCTAT
ATCAATAGGCGATGTATTGAAGGCTGGAAAACTTCATCAACCAGAAGAGA
AAAAAAGTGAGCTTGAATATTTTGATATACCATCAAGAATTTGGgttaaa
gaaaacaaaactcttgcaattaaattagaaaaatttgcAGAGGGTGCATT
TCGAGAAGCTTTTATGGCTTATGCAAATGATGGTGGCAAGCACAGCCTTT
ATGTggtcaaaaagtttaaagaaagtTCATGGGAAAAAGTTGGAAAAGTG
TATCAGATGTCACTCGAGCAACACACAAGAAAACAAATTCAGATGCATAT
GGGCGCTCAGGCTATCGCAAACagatattttaaaaagttgtcaCTTCAAA
ATAATCGGGATGAATGGTTTTCGTATAATGACGCCTATTATTCTGTGTTG
GATGGGTTACCTGTTACAGTAGAGCCTTACGTTCCAGGAAAGTTTATCAA
ATACATAAACAACGATGGGGAAATTGGTAAAAGTAAGGTtaataaacttt
tttatgacaagGCAGAAGCATTGGCTCATTTTTCCTACCAGGAGAGTGAT
GAAAAGCTGATGCTACTTGATATTCAAGGTAGTGGATTGACACTTTACGA
TCCAGAGATAGCGACTGCTGATGAGTTTGTTGATACGAAaggggaaagat
ttttttgtggTGGTAATTTGAATGGTGAAGCTATGGATTTATTTCTTCAC
AATCACAGATGTAATATATACTGTAAACTGGTTTCCCTCGAAGAAGTAAT
CTTAGAAAGCAGTGCAAAATCTTCTGGAAAAGAAGAGGAGTAAAATGACA
AGTTTTCGTCCTACTCTGGATTTTGTTgacattttactttttatataaGT
TTTATATAGTTTatattgattttttcattttttcagctATTTTCCTATAT
TCTTATATACTTTCGATCATATACTTTGGCTTTTGACATTTGTATAGTTT
ATATGGATTTTTTCATTCTTCAGCTATGTATTTTCCTATTTGATGGCATA
TACTTTCATGGCCATATACTTTTGCTTTTGACTTTTGTATagtgtttatt
gattttttcctATTGATTGATCTATCAGTTTCTTTTGTTATGTCACCc Run BLAST on NCBI protein sequence of TCONS_00025364-protein >TCONS_00025364-protein ID=TCONS_00025364-protein|Name=TCONS_00025364-protein|organism=Clytia hemisphaerica|type=polypeptide|length=440bp
MSNNREKWLAYNKNVAKRKKGEDTKNGKKAQKLSSIIVHRMKPIPEGKLL
KFEPQQPRDFINFSNYQGLTLKNVKLACEQFYGEQPGSCDVLFSKEGPSC
DLDEQIVGKKVILIRFIQPSAVTTKITSQNLPSKNISSSVAGSSKSSNIS
KRRRVSNSKMNIQQKTANPSQQFPRSISIGDVLKAGKLHQPEEKKSELEY
FDIPSRIWVKENKTLAIKLEKFAEGAFREAFMAYANDGGKHSLYVVKKFK
ESSWEKVGKVYQMSLEQHTRKQIQMHMGAQAIANRYFKKLSLQNNRDEWF
SYNDAYYSVLDGLPVTVEPYVPGKFIKYINNDGEIGKSKVNKLFYDKAEA
LAHFSYQESDEKLMLLDIQGSGLTLYDPEIATADEFVDTKGERFFCGGNL
NGEAMDLFLHNHRCNIYCKLVSLEEVILESSAKSSGKEEE Run BLAST on NCBI transcript from alignment at sc0000532:85825..88072 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025364 ID=TCONS_00025364|Name=TCONS_00025364|organism=Clytia hemisphaerica|type=transcript|length=2248bp|location=Sequence derived from alignment at sc0000532:85825..88072 (Clytia hemisphaerica)
gGGTGACATAACAAAAGAAACTGATAGATCAATCAATaggaaaaaatcaa
taaacactATACAAAAGTCAAAAGCAAAAGTATATGGCCATGAAAGTATA
TGCCATCAAATAGGAAAATACATAGCTGAAGAATGAAAAAATCCATATAA
ACTATACAAATGTCAAAAGCCAAAGTATATGATCGAAAGTATATAAGAAT
ATAGGAAAATagctgaaaaaatgaaaaaatcaatatAAACTATATAAAAC
ttatataaaaagtaaaatgtcAACAAAATCCAGAGTAGGACGAAAACTTG
TCATTTTACTCCTCTTCTTTTCCAGAAGATTTTGCACTGCTTTCTAAGAT
TACTTCTTCGAGGGAAACCAGTTTACAGTATATATTACATCTGTGATTGT
GAAGAAATAAATCCATAGCTTCACCATTCAAATTACCAccacaaaaaaat
ctttcccctTTCGTATCAACAAACTCATCAGCAGTCGCTATCTCTGGATC
GTAAAGTGTCAATCCACTACCTTGAATATCAAGTAGCATCAGCTTTTCAT
CACTCTCCTGGTAGGAAAAATGAGCCAATGCTTCTGCcttgtcataaaaa
agtttattaACCTTACTTTTACCAATTTCCCCATCGTTGTTTATGTATTT
GATAAACTTTCCTGGAACGTAAGGCTCTACTGTAACAGGTAACCCATCCA
ACACAGAATAATAGGCGTCATTATACGAAAACCATTCATCCCGATTATTT
TGAAGtgacaactttttaaaatatctGTTTGCGATAGCCTGAGCGCCCAT
ATGCATCTGAATTTGTTTTCTTGTGTGTTGCTCGAGTGACATCTGATACA
CTTTTCCAACTTTTTCCCATGAactttctttaaactttttgaccACATAA
AGGCTGTGCTTGCCACCATCATTTGCATAAGCCATAAAAGCTTCTCGAAA
TGCACCCTCTgcaaatttttctaatttaattgcaagagttttgttttctt
taacCCAAATTCTTGATGGTATATCAAAATATTCAAGCTCACTTTTTTTC
TCTTCTGGTTGATGAAGTTTTCCAGCCTTCAATACATCGCCTATTGATAT
AGATCTAGGAAACTGTTGTGAGGGATTAGCAGTTTTCTGTTGAATGTTCA
TTTTGGAATTAGAGACACGtcttctttttgaaatattgctAGATTTGCTT
GAACCTGCAACTGATGAAGATATATTTTTGGAGGGTAAGTTTTGAGATGT
TATTTTTGTTGTAACAGCAGAGggttggataaatctgatgagAATAACCT
TTTTGCCCACAATTTGTTCGTCCAAGTCACAACTTGGACCCTCTTTAGAA
AAAAGTACATCACAGGATCCAGGTTGCTCACCATAAAATTGTTCACAAGC
TAacttgacatttttcaaagttaaaccttggtagtttgaaaaatttataa
aatctcTAGGCTGCTGAGGTTCAAATTTCAACAGCTTTCCTTCTGGAATT
GGTTTCATTCGGTGCACAATGATGGAAGACAATTTTTGTGCCTTTTTACC
ATTCTTTGTATCCTctcctttctttctttttgccaCATTTTTATTATATG
CCAACCATTTTTCTCtgttatttgacatttttatcaGTACATACAGTTAT
TTTCactaaagagaaaagaaaagatttgatAATGTTAACAGTAACAATTG
ATatataccgtgaaaaagggtaaactTTGAGGGAAATTTAAATTGCATCA
ACATAGCAGATCGTTCTAGTCATCAAATTGTAGCATATATCAAGTCAAAA
AACATAGTTTTATTAACTTTCTAACTTCATTATAAAATGCAAACCAGAAA
GGTCTGCTGTTTTTAGGCaatgcaagttaccctccaGTGACaaaagttac
cctttttcacatCAATAAACACGAGAGATTAGAAATTGATAAAAGCAGTG
TCAAAACAAGCTGTTTCAAATACACgctattttaaaaataacagaTGAAG
ATGATCTTAAAAAGTACCAGTGAAAAAGAACAAATAATGCAGAATCTACA
TAAGCTGAAACCCTATCAAAACTGGCTGGGCCTTAGCATAAGGAAAAGAA
TCAAAGAAAAGTGTCAAGAAGCCAAGAACTTGAATTAAGGAAACAATGTT
GATTTCGTCTGGTgtgtaagaggaagccctagagCAAGACTTTGCCTAGT
AAAAAAAGCTAGGATCCCAACCATCGGTCAGATGATGAGTAGATTTTT Coding sequence (CDS) from alignment at sc0000532:85825..88072 >TCONS_00025364 ID=TCONS_00025364|Name=TCONS_00025364|organism=Clytia hemisphaerica|type=CDS|length=1323bp|location=Sequence derived from alignment at sc0000532:85825..88072 (Clytia hemisphaerica)
TTACTCCTCTTCTTTTCCAGAAGATTTTGCACTGCTTTCTAAGATTACTT
CTTCGAGGGAAACCAGTTTACAGTATATATTACATCTGTGATTGTGAAGA
AATAAATCCATAGCTTCACCATTCAAATTACCAccacaaaaaaatctttc
ccctTTCGTATCAACAAACTCATCAGCAGTCGCTATCTCTGGATCGTAAA
GTGTCAATCCACTACCTTGAATATCAAGTAGCATCAGCTTTTCATCACTC
TCCTGGTAGGAAAAATGAGCCAATGCTTCTGCcttgtcataaaaaagttt
attaACCTTACTTTTACCAATTTCCCCATCGTTGTTTATGTATTTGATAA
ACTTTCCTGGAACGTAAGGCTCTACTGTAACAGGTAACCCATCCAACACA
GAATAATAGGCGTCATTATACGAAAACCATTCATCCCGATTATTTTGAAG
tgacaactttttaaaatatctGTTTGCGATAGCCTGAGCGCCCATATGCA
TCTGAATTTGTTTTCTTGTGTGTTGCTCGAGTGACATCTGATACACTTTT
CCAACTTTTTCCCATGAactttctttaaactttttgaccACATAAAGGCT
GTGCTTGCCACCATCATTTGCATAAGCCATAAAAGCTTCTCGAAATGCAC
CCTCTgcaaatttttctaatttaattgcaagagttttgttttctttaacC
CAAATTCTTGATGGTATATCAAAATATTCAAGCTCACTTTTTTTCTCTTC
TGGTTGATGAAGTTTTCCAGCCTTCAATACATCGCCTATTGATATAGATC
TAGGAAACTGTTGTGAGGGATTAGCAGTTTTCTGTTGAATGTTCATTTTG
GAATTAGAGACACGtcttctttttgaaatattgctAGATTTGCTTGAACC
TGCAACTGATGAAGATATATTTTTGGAGGGTAAGTTTTGAGATGTTATTT
TTGTTGTAACAGCAGAGggttggataaatctgatgagAATAACCTTTTTG
CCCACAATTTGTTCGTCCAAGTCACAACTTGGACCCTCTTTAGAAAAAAG
TACATCACAGGATCCAGGTTGCTCACCATAAAATTGTTCACAAGCTAact
tgacatttttcaaagttaaaccttggtagtttgaaaaatttataaaatct
cTAGGCTGCTGAGGTTCAAATTTCAACAGCTTTCCTTCTGGAATTGGTTT
CATTCGGTGCACAATGATGGAAGACAATTTTTGTGCCTTTTTACCATTCT
TTGTATCCTctcctttctttctttttgccaCATTTTTATTATATGCCAAC
CATTTTTCTCtgttatttgacat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025364-exon-sc0000532-1491911889:85825..88072 | TCONS_00025364-exon-sc0000532-1491911889:85825..88072 | Clytia hemisphaerica | exon |
| TCONS_00025364-exon-sc0000532-1510915933:85825..88072 | TCONS_00025364-exon-sc0000532-1510915933:85825..88072 | Clytia hemisphaerica | exon |
| TCONS_00025364-exon-sc0000532-1575043694:85825..88072 | TCONS_00025364-exon-sc0000532-1575043694:85825..88072 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000532 | supercontig | sc0000532:85825..88072 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004674 |
protein serine/threonine kinase activity |
Blast
The following BLAST results are available for this feature:
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