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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025356 ID=TCONS_00025356|Name=TCONS_00025356|organism=Clytia hemisphaerica|type=transcript|length=640bp
ATTTATGTTGTATATGCTGAACAGATACTTCCTTCAGGAATTTCAGTGAA
ACTTGAATGTTGGAGAATTGTGTTTATCAAAATTGGGAATCCATTCATGT
GTACGCAGCGATTTTTCAGCAGGACAAAAGGAGTAATGCAAATGGTTTGG
AGAAATTGTACAAACCTCACGCTTGAACTCATCCCGAAGACTGGCTGTAC
TTTTCTCGGAACTATCAATCCTGGCAAGCTTGATATGACACTGTCGACAT
ATGCGTGCTTCCTCACTGATATCATCCCACAAGTCTAGTTTTACAAGTTG
ACCCTTTGGGATAAATCGACCTGGATTTTTAAGCTTCTGAGCAGGTGAAA
CTCTGGATGTATGCTTGTCACCTGGGTCCAACTCCTTGGTGCAACAAATG
CATGGGATTGTCTCTTTCACTacaaaagaaatcatttttctcattaaaaa
agCTGGAAGATGCTAAGATTCTGTAgctgtttttttaacttttaagacTT
TTGTATTGCATAAAGTAACCACTACTACTgtcattgtttttaaaaagtag
CTAAATACTACCAACAAAGTTGTTTACCATTCATTTCATTCCTATCTGCC
AGTATGTAACCACTATAGCTTGATTTTTATTTGGATTcct Run BLAST on NCBI transcript from alignment at sc0000532:72924..75775- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025356 ID=TCONS_00025356|Name=TCONS_00025356|organism=Clytia hemisphaerica|type=transcript|length=2852bp|location=Sequence derived from alignment at sc0000532:72924..75775- (Clytia hemisphaerica)
ATTTATGTTGTATATGCTGAACAGATACTTCCTTCAGGAATTTCAGGTAT
GGGATACTTTTTATCAGGATCCTACCAATGAGGACAATATAATCTTTCCT
CTGAGTTGCTTGCTCCTTTTCACTTGGTATTATTATTGAATTGTCAAGAT
CCATAACATCACGTTCATTAAAATCATCATATTCATTGCATGGCATGCGA
TTTTCTGTCGTCATCACTGTGACCCAATGCTCATCCTATAGCAAAAAATA
TATAAAAACTTGAAAGGAACTTAAGTTTCTAGGAACCATCAATTTTACAA
AAAGAAGCAATTATAAAGAAGGATTTTTTTATTCAATATTTCTTAAAATA
AAGTCATTTCAAACCTTGTTTTTATTTCCCATAGTTTCATCATGTGGTTT
TGTCCTGATGTCAAAATTGTCAATTGTTGCCTTTCTACCCGAATCCTCAG
AAATTTCTTCACGCGGTCTCTTTTCTTTTCGCTCAATGATGACAGCTTTC
GGAATTGCTACCTGAAAATTTTCAAAAATTCAAAGCTTATAAAAATTTAA
TTTACTTTTTAAGCATCTTTGTATTTTAAGAAACTTCTTTTGAATAATTC
AAATTAAAAGGAGATAAGAACATTTTAAATTTCACAAGCTTCAGGAAGAT
TGCTTTAATTTTCTCATGTTTTATGCTAAATTTCAAGACTGAAAGTATGT
TATACTGTAACCAGCTGTAACTTGGTTGATCTTTTATTACCTTAAGGAAC
TAATTTTGTTGTCGTCTTACTTGTCTGTGGGTCCTCATAATGGGTATAGG
TGTCTTTTCAAAATCATCATCTACTTGAATACTAAATCTTCCAATCTGAA
TTTTTTTATCTTTTACAATTTGTATATCTGTTTCAGGATCTAGAGAAATT
CTTGGCAATTTTGGAATGAGAACAGGTTCTCTGTTTACTTGGACTTTAAT
CAGTTTACTTCCAATGAGTTCTTCCAATCTATCATTTTCATCACTGATCT
TTTGTTTTAATTTTGTGTCAAAAGTTTTTCCATATTCAGCTGTTTTAGTA
TAGTAGGTTGTCAATGAAGTTGTCAGTCGTAGTATCTGCAGCCTTCTTAT
CGTGTTCTGTTAAGAAAATTGAAGTAATTACTTTAAGGTTTTTTTCTCAA
AGAAGTTTTTTAGTTGATAGGTATGACTTATATAATTCCACAATTAATCA
AACGCCGCCTTAAATAAAGTTAATGTTAAAATTAAATTTTTAAAGCGTTG
TATTAGTTATCACCAGTTGTGAATTTGAAATAATTTCAGAAAAAGCAAGT
ATTCTCTCAGTTCATGACCACTTGGCTACAGTGCTAGATGACTAAAGCTA
AAACTCTAAGAAACTAGTTTTAAACTGTACAGTACTGGCATGTATGAGAA
AAATGCTTAGTCCAATTTTTGATGAAGTCTTAGATTTTGCACGCTTACAT
TCAAAGGTTTTATAAATCAGAGTGTAGCAACTTTGATGAAGTATTTAATT
AATTATTTGTATTTCATGAGAAGTTTTAGTTGTTCCTGATTGTTTTTATT
ATATTATATAGTCTCCTGTGCATGGTTTACACAGGAAAATAGTTTTTTTA
TTGATATAATAGTGGAACATAGAAGTAACCTAATAAAAACTGATTTTTCA
TCTTTTTGCAAGATAAAGAGTCTTGTTTTGAGAAACAAAGAGTACCTTTT
TGAAAAATGAATAACTTTTTTAAGTTTTTTTTTTTAATTTTACATTTGTA
ATGGAGAAACATTTTTTAACTTTCTTAGTCATGCTATAAGAATTCCTTAA
AGTTTATTTTGTTTTTCATTTAGAGTATAGTAAATGGATATTGAAATCTA
TCAACTTATGTACTCATACTTACAGTGAAACTTGAATGTTGGAGAATTGT
GTTTATCAAAATTGGGAATCCATTCATGTGTACGCAGCGATTTTTCAGCA
GGACAAAAGGAGTAATGCAAATGGTAGGAAGCCAGAATTTAGATTTTTCA
TCCTGCTCATTTTTTATTGTAGTTTCTTTTAATATTTTAGTCATTAAAGG
TGTCCTTAGTAACAGCTCATCATGGACTTTGTCAAATGTCAAATTATTAA
TTGTTGCTCATTTAGTGGTGCGAAGAATTGATGGATTTTTTCTTCCACAA
ATGTGCTCGCATTCCAAAGATATCCTTTTTAGAAAAAGTTCTTCAATATT
TTAGTAAATCTTAGGTGTATTTAAAATTGTGTTTGCAATATCCTTGTAGG
TCCCTTTAAATAGGGCTTTCCCGATAGGCTGTAAGGTCTCACAAAGCTGT
CACTCAGGGAAGTCTAGATTTACTAAATTTCCTTTCTTTCCTTTCTCTCT
GTTTAGGTTTGGAGAAATTGTACAAACCTCACGCTTGAACTCATCCCGAA
GACTGGCTGTACTTTTCTCGGAACTATCAATCCTGGCAAGCTTGATATGA
CACTGTCGACATATGCGTGCTTCCTCACTGATATCATCCCACAAGTCTAG
TTTTACAAGTTGACCCTTTGGGATAAATCGACCTGGATTTTTAAGCTTCT
GAGCAGGTGAAACTCTGGATGTATGCTTGTCACCTGGGTCCAACTCCTTG
GTGCAACAAATGCATGGGATTGTCTCTTTCACTACAAAAGAAATCATTTT
TCTCATTAAAAAAGCTGGAAGATGCTAAGATTCTGTAGCTGTTTTTTTAA
CTTTTAAGACTTTTGTATTGCATAAAGTAACCACTACTACTGTCATTGTT
TTTAAAAAGTAGCTAAATACTACCAACAAAGTTGTTTACCATTCATTTCA
TTCCTATCTGCCAGTATGTAACCACTATAGCTTGATTTTTATTTGGATTC
CT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025356-exon-sc0000532-1575043694:75730..75775 | TCONS_00025356-exon-sc0000532-1575043694:75730..75775 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1575043694:73803..73900 | TCONS_00025356-exon-sc0000532-1575043694:73803..73900 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1575043694:72924..73419 | TCONS_00025356-exon-sc0000532-1575043694:72924..73419 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1510915933:75730..75775 | TCONS_00025356-exon-sc0000532-1510915933:75730..75775 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1510915933:73803..73900 | TCONS_00025356-exon-sc0000532-1510915933:73803..73900 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1510915933:72924..73419 | TCONS_00025356-exon-sc0000532-1510915933:72924..73419 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1491911889:75730..75775 | TCONS_00025356-exon-sc0000532-1491911889:75730..75775 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1491911889:73803..73900 | TCONS_00025356-exon-sc0000532-1491911889:73803..73900 | Clytia hemisphaerica | exon |
| TCONS_00025356-exon-sc0000532-1491911889:72924..73419 | TCONS_00025356-exon-sc0000532-1491911889:72924..73419 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000532 | supercontig | sc0000532:72924..75775 - |
Blast
The following BLAST results are available for this feature:
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