TCONS_00025307 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025307
Unique NameTCONS_00025307
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1186

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025307 ID=TCONS_00025307|Name=TCONS_00025307|organism=Clytia hemisphaerica|type=transcript|length=1186bp
GGAATAGCAAAGaacagatttcttttttttattatttagtcCAAAAGAAC
CATCCCATAAAAACCATATGTCTGCTAAACTCTCATAAATTGAATATTAA
ATCCAGTCTCATGAATTTGGTCTGGTTTTTCCAGAGGACCTCCTAAGCAG
AGATTGAATCAAAGAGTTTTGGGAGACACATAGTTCAGATCGCCCGGCAA
CAAATCTACAAATCATTAGAATATCGAATATAAACAATCAGAAGAATGGA
ATCGAGTTTGGTTTTATTTTGCACTTTATGCTTGATTGCAACTCAAATTG
TGACAGCTTTTGAAGAAGCGAGCCTTGGCAACGATGTGAAGAATATCGTT
CACAAATTCAACCAAGTAGACATCACAAATGAAAATTCGGTTGAATACAA
CAATCACAACCAAGAAAAAGTTCATGAGCCCAACCCATGTCACATGGTCA
ACACAAAATATGGATGTTGTTGGGACCAAAAGAATATTGCTCTTGGACCA
AATGGAAAAGGGTGCCCAGcTTGCAAAGATCACCGACACATGAAATGTAA
AAACTGGAAGAAAAATTGTCATGAAAAAATCGTTTCTGCTATGTGTCCTT
CTACTTGTGGCTTATGTCctAACACCGCCAAACCAGTTCAGAGAGGATGC
AAAAATGACAAATTCTGGAATAAATTATGCCCAGTTTATAAACGACTTGG
ATTCTGTACGCAATCAACGATATCAAGACATTGCAAGCTGACTTGCTCTA
AATGCACGTAGTAACAATGACAACACTGCAAACTGACTTGATTTTTAGTT
CCCATGCCTCCAGAAGATAACATTTAGAATAGAGATAGAAccgttttttt
tctttaggAATTGAAGCTTTTAGTAGCTGCAATTTATTATTGTACATATA
TTTGAGTTGAACATGTGACCAggatttcaatcgaaattttgCTCGTTTCA
AACCGAGCCTAGTTAGTAACGTCCTTTACTGAAGCGAGCCTAGTTTAAGT
CATGGTTACATGTTTCTAACCATTTTTTTTGGCGcgatatttttttttgg
tctgacttttattttttatatttatgtggaaaaacagatttaaagagaga
atttatttatatattatgTGACATGTACAGAGGATGCTTTTAAAATATTA
TGCAAATGTAAAAAGATTCTAAGAGATTACTACGAG
Run BLAST on NCBI

protein sequence of TCONS_00025307-protein

>TCONS_00025307-protein ID=TCONS_00025307-protein|Name=TCONS_00025307-protein|organism=Clytia hemisphaerica|type=polypeptide|length=171bp
MESSLVLFCTLCLIATQIVTAFEEASLGNDVKNIVHKFNQVDITNENSVE
YNNHNQEKVHEPNPCHMVNTKYGCCWDQKNIALGPNGKGCPACKDHRHMK
CKNWKKNCHEKIVSAMCPSTCGLCPNTAKPVQRGCKNDKFWNKLCPVYKR
LGFCTQSTISRHCKLTCSKCT
Run BLAST on NCBI

transcript from alignment at sc0000531:119689..128475+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025307 ID=TCONS_00025307|Name=TCONS_00025307|organism=Clytia hemisphaerica|type=transcript|length=8787bp|location=Sequence derived from alignment at sc0000531:119689..128475+ (Clytia hemisphaerica)
GGAATAGCAAAGaacagatttcttttttttattatttagtcCAAAAGAAC CATCCCATAAAAACCATATGTCTGCTAAACTCTCATAAATTGAATATTAA ATCCAGTCTCATGAATTTGGTCTGGTTTTTCCAGAGGACCTCCTAAGCAG AGATTGAATCAAAGAGTTTTGGGAGACACATAGTTCAGgtatttcttata tttcaatcatttaaagaatttcatttttgatgCAAGCGGGGTGTAGTGGT GACACATAGATAGTTTTGTTTTGTCTAATACTTAATCTTGTTGGTAAAAA AATAGTGCTCAGTCTAATAGAATTTGAATGAATGACGAATAAGTTTACAA GATTTGATACCGTTCTACTTAATGGGGTGTACAGTATATGCTTCTGATga ttttttaagcgttttaattttcatttatacATCATACTTTCTAAATATAG CATTTTGAACTTAGAGTAGATTTTTCATTCGAATGAACTGTTGCTTGGAA GCTATTGTGAatacagtacacgttttttataagaacaaactatataagaa cataatgcttcgatggccaaaatattaagaacaagttaagaacattctaa ggctttgagGACCTTAAAACAccagatttcttaggaaaatggacaacatt ttcaaaaaatggcgaaaataataacatgttaagaacatttttaggcttaa aattcagaaagtaaagaacattccaaggcttcaaaaatgttggatgttct tataaaaaagacgtgcactacattttgaaaatttcattgccatgcttttc acatttttagaCGTTTGCTcatttggagacatgtcaatgACACACTTGAA CTCCAACAGAGCTCAAAAAACGACCCGTTCGCATTTATTTTAAACACTGG AATATGATTGGTCGCCTGtcagccaatcagtaaccttgTAATCAATGTAA TCTTATAGCGTGTGGATTTAAGCATAAGAtaaacatttgaaatattttga ttgaaaatttttgatgacgtcatcaaaagggATCAGTCTGATCTTTCGTG TAGATTAAGATTTTCATTTGCAACATTCTTTCAAACTTTGATGAAATTCC CCATCAGGCTTACCTAGGTTTACGCATTCTTTTGTGATGAGAAGATAAAC TGAACTGCAATTTGAAGACAACTTGTCTGCAGATTTCCTCCATAATTCAC GCGACTTTTTCGCCAGAATCGAAAATAATGCAAGGTATTTTAAGCACTTA GAATACGTTAAATCTACATTTTTACAATACCTTTAAAATTACAATCTTGA TATGGCTTTAAAAAACCAGATAGAGTTTTGCAGTATTCAAGTCAACGCTG TTTCACAGAACCTTTGCCTCCAATAGAATCATTCAAAAATGACATACAGT AGACAAAAGAGTTTGCAGTCTGCTAATCTGACAGGTGTATTTTGCAGAGG AGAAGTAAgcaatcaaatttcttttcaaaactgTCTCTAACTGAACCACA AAACCTTGCAAAAGGAACGGAGAGTTTTACCACAAGTTTTTGTTGAGGTC AATTATTGAACGGAAGAACTCTTTATTGAAAACGAAAACCAACCATTAAT TAAGTATAATTCGACTCATTAATGATATAAATttgtaatcgtcagccgtg caaaattactcgaatctgattggtttagaggagtgcaattaatcgttaat tgcactattaccactttttgcactcttcggcggggggacacttttgtccc cttattcttttctctcccaagttaTGTGTCAGATGTgtctatataataaa aacagagacatttttttttcttaaatataaaaaagaacaaagaaatttaa cgttacaatagcttcttttaattgaaaacaaagaaaaattacactgcaat gttttctttttaaacaaaagaaaaaaaggaggttttcgaatgtttactga cGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNATTGTACTATCCACCATCCGCAGTGGGTTAAATATACA ATGTATCTTTAACTAGTACTTTCGGTGATCACACGTGCTAAAAACCCCTC Caaaattgtgaaattgaaaaaataattaaaatgactcatgactggggatt tgaattccattgttttcaagccatgaaattcagtggggatggaaaaaata gcatgataatttgcagtgaggattggtttatctgattatttttagCGGAG ACGAAAATTAGAATATAATTTTgtactggggacgatattttggccaattt ttccagtgggaagggttcccagtgggtctgtgagaaggatgTGTAATACT TCTGCGTCGTAAATGTTGACTCGACTTCCCTTCAGTTCTGCCTCAACAGT CCTAATGGTATTATTCTTCATTTGCAATTGTTCTATCGTAATTATCTTGT AAAAGTTTTCATATTATTCTTTAAAGAAAGCGGGAAAAGACGTATATATA GAAGTCTAAGCTACACTGTTAAGAGTGAAGATTTTACGATCCCTTTTTTC ACATCAAATAGATGTTAATGTTACCGTTTTACTaagaattttcttaaaaa ggacGAAATAATTTATTTTACAGTACCTCAAATCTAATCACCTATCTGCA GATTAAAAAAGCAAttaatttctaaaaagtttcttCCAGCATCAAATCAT AGGTTTTTAAATACCAACGTCAATTTTCGAATAATCCTGTCTGGACCAAT GTTTCAAATGTTTCGGGTGCCTCCTCCTCTAATCAGTTTTCGTCGTCAAA AATTAGTcaagacaatttttttcttacGAGTTTTTGTATCATACTCTACC CCCTTGATCTTTATCAATCATGATTTGTGATTTCCCAGTATGCTTGTAat caatttggaaaaaatgatgaaaataacacATCTAAGATAAAAGTATTCTC TGCGCAACCTTCTGTCCATATATGGTAAAATGACTACAATGTTTGAcata ttttattaatttcaacATTCTCTCCCTACAATATACTTACTTTACCCTGC TGGATTCATTTCCGATCAgctatttttgattttgattttttctctatATG GAAAGTCATTCCAAAAATTCCATTGACTTTTAAAATCACCCGTTCGAATG CAAGTGGGAAAATCTTTagaatgttttaaatagtttgaCACTTATCTGGA AACTGACCGTTGCTATGGCAatatagcgagcacctcactaaaaagcggga ttttttatctcgtttcttagttAGTTctactttgacgattttttaaaaat agaagcctttcaagtgctttgacgtaAATACGATTTTTCCCTACTGCAag ggcttcaaaagtttaaagtgacgtcaaaaaatcgaatgtttggagcccga aaaccctagtctgaatcgcagacctctacaaaaccccaggtagtataagg agcacgaatccgttagtggatgccagcagcctacgaaaacccgggctcaa aacattcgaaaaaatcgcaaagtggaatagatgttaattgcgtaaaaaaa aacGCGtttgacgtctagtataggctaatgGCAATATTGCGTCTGAGAAT ATTAAACTGCTTCCGTTTCCGGTAACCATGGTAATTTAACGAATTCCACC TACACGAGAATTGCTAATTTTATCTTTCGTTTCATCATGATGAAATTTCA CTTTCCTTTAGATACATACCCACGTGTGGTACCATGATGTTTTTATCGCA TACACGCATCGAGAAAAAACGCATGACAAATTACCTTTGATTTCTCccga tattttatttttgtaatataCAAACTAACTTGACTTATGCACTGATCCAC AGCTTGTCTTTTATGTTCATAAACAAACTGAATGATTCATATGACTCATT GTGGCCTGATTTTACTGGCCTTTAAATTTTCCTAACAGCTTGAAGATTAT GGGATATTGAATATTTAGATTTCGAAATTTCAGTTTTTAGTGAGATTTTT GACCTGCATTTATTCAACAAAAATCGGAAATGATTATTGACCAAAGAACT AGATAAAAGTCTAGAAGATCGTGACAGCTTGTTTTTTTGGGTGATTGTTT TCTAAATATTTGTGTTTcgatgaaaaatatttgtttgaaaaatggatTTG ATGATAAAGTCGGCCTTAAGACTTACTTTTATTATCTTAATGAGTCAAGC GCTCAGTGGATAGAATGCAGTCATCTTCCACGTGGCNATTGCACAATGTG ATAtagatttttgaccttttcataaaaattgagGCTTTCTTGAAATTACA TCATGCGTGACAAGTAACGTGACGTAATGATGGGAAACTCCAGGGGGTGT GCTAATTTGCGCCAGGCCCTCTGACATCACAAATTACGTAATGTGGGATA TCTCGGTAGGGGGTGTCGAAAAATTGCGACTTGTTGGTTTTGTACTTGAA NGATAAAGTCGGCCTTAAGACTTACTTTTATTATCTTAATGAGTCAAGCG CTCAGTGGATAGAATGCAGTCATCTTCCACGTGGCCCACAAGAGAGGTTC CAAATGTTCTTGTCTACAGTATAGTCTAGTAAGGTCGTGCTCTTTGTATG TGCCCGGTTGCCACAAATCATTGAAAAACTTGTGGTATTTTCCGTCAGCT CTTGAATTGTGTTGATAGGCTACTTAAGGGTCTACCAGGGTAAAGTTTAC GATTTTTATATCCATTATAGTAAAGTAAGTCGAAAACAAGAGAGATTTAC CCAGTCTGAAAGTCTTTGggcatcaaaatcattttcactagcaaaatgaa attttttgaaaaatgaattgtAAGCTAAAAGATTTTCTCAAACTAGAANC TTGGCTATtggttttgagaaaaatgatgATTACATTAGATAATGTATTTA GTTTGATAACAAGTGCGCTTTTCTCTATCAGATGAAGTAATTGAAAAATG TTAATGAAAGCTCAATCATCATAAGCAGTGTACTGTGTATTAGTGAGCTC ATGGAATGTTAAAAAtgtcttttatttgaaaagacaATAGAGAGATGACA TGATGATAGCGAAAGGTTTATAAATGAACGCGCGTATTGTACACTCATTT CAAATCAGTAAAGTCAGTCAAAACGTGTAGACGTTCAGAAGTTATTTTGT GGTATCTCTTATAGATCGCCCGGCAACAAATCTACAAATCATTAGAATAT CGAATATAAACAATCAGAAGAATGGAATCGAGTTTGGTTTTATTTTGCAC TTTATGCTTGATTGCAACTCAAATTGTGACAGCTTTTGAAGAAGGTAAGC AGTCTAAGCAGTCTGAATGTCATGTATGTGGTAGCTCTCTTACCGGAAAT gaaattcagatttttaaaCATAAAATGCTCAATTGAAGGGTTtcttaaat caatttttcaatgaaTGCAAGATAGGAAGCATTGCCCTCAGTCCTTAGTT TAGTAGCTCGCTATAAAACTGACATCAATGTGCTTGAACGTTGAATAAGG AAGAGTTGTAACCCGcttcatttctttcttttccaaTGTACTGAATGTGG TAAAACGTttacattttcatttctttcattaCAGCGAGCCTTGGCAACGA TGTGAAGAATATCGTTCACAAATTCAACCAAGTAGACATCACAAATGAAA ATTCGGTTGAATACAACAATCACAACCAAGGTATGGACCTCTTTAACATC CTTGTTTAATTCATACCGAGGCTACCTTAAGATTTGAAGATTTTCAAGTT ATTTCGATCTCATCTTGCTTAAATTTACGATTTAGCCTTATTACATGTTT GTCatctttttgacttttcatttttttctttccaatagAAAAAGTTCATG AGCCCAACCCATGTCACATGGTCAACACAAAATATGGATGTTGTTGGGAC CAAAAGAATATTGCTCTTGGACCAAATGGAAAAGGGTGCCCAGGTGAGGA ATTCTCTTCATTCTGATTGGCTCCAGCGTTACTGCATGCAATATCAAATA ATCTAACTGAAAGCTATGTTAAAGAAAGACCCTTTAGACATATAGTGAGC GTACTGGTTTTCCCGCTGTGTATGGTATTCGAGGATTAGTCATATCTACT CATACCATCTCAGATAAtgagtattttttgaaatcaaaagcaTTCTTTAC TGCATAAAAGATATAACTAGTGCATCAACACGCTCAATCTTGCATAATGG TGGAATGTGTTCTAGACAAAATCTCCATCAACATTCCCCACATATTTCTT CAAAGATTTTTATttaatgaattattttttcgtttttcagcTTGCAAAGA TCACCGACACATGAAATGTAAAAACTGGAAGAAAAATTGTCATGAAAAAA TCGTTTCTGCTATGTGTCCTTCTACTTGTGGCTTATGTCGTAAGTGTTTT ATCTTTTCAAGAGTTCAGATTTGTTCCTGGTGTCAATCACAAATATCCGA ACATTTTTGAAGATATATATTCCCATTGAATATTGGGGTTTCAGAGTCCT GCTACTGAAAATGTTTGACTCACAATGTGCAACAGCGGTCaatttaagtt ttttattttttgttttcagctAACACCGCCAAACCAGTTCAGAGAGGATG CAAAAATGACAAATTCTGGAATAAATTATGCCCAGTTTATAAACGACTTG GATTCTGTACGCAATCAACGATATCAAGACATTGCAAGCTGACTTGCTCT AAATGCACGTAGTAACAATGACAACACTGCAAACTGACTTGATTTTTAGT TCCCATGCCTCCAGAAGATAACATTTAGAATAGAGATAGAAccgtttttt ttctttaggAATTGAAGCTTTTAGTAGCTGCAATTTATTATTGTACATAT ATTTGAGTTGAACATGTGACCAggatttcaatcgaaattttgCTCGTTTC AAACCGAGCCTAGTTAGTAACGTCCTTTACTGAAGCGAGCCTAGTTTAAG TCATGGTTACATGTTTCTAACCATTTTTTTTGGCGcgatatttttttttg gtctgacttttattttttatatttatgtggaaaaacagatttaaagagag aatttatttatatattatgTGACATGTACAGAGGATGCTTTTAAAATATT ATGCAAATGTAAAAAGATTCTAAGAGATTACTACGAG

Coding sequence (CDS) from alignment at sc0000531:119689..128475+

>TCONS_00025307 ID=TCONS_00025307|Name=TCONS_00025307|organism=Clytia hemisphaerica|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000531:119689..128475+ (Clytia hemisphaerica)
ATGGAATCGAGTTTGGTTTTATTTTGCACTTTATGCTTGATTGCAACTCA
AATTGTGACAGCTTTTGAAGAAGCGAGCCTTGGCAACGATGTGAAGAATA
TCGTTCACAAATTCAACCAAGTAGACATCACAAATGAAAATTCGGTTGAA
TACAACAATCACAACCAAGAAAAAGTTCATGAGCCCAACCCATGTCACAT
GGTCAACACAAAATATGGATGTTGTTGGGACCAAAAGAATATTGCTCTTG
GACCAAATGGAAAAGGGTGCCCAGcTTGCAAAGATCACCGACACATGAAA
TGTAAAAACTGGAAGAAAAATTGTCATGAAAAAATCGTTTCTGCTATGTG
TCCTTCTACTTGTGGCTTATGTCctAACACCGCCAAACCAGTTCAGAGAG
GATGCAAAAATGACAAATTCTGGAATAAATTATGCCCAGTTTATAAACGA
CTTGGATTCTGTACGCAATCAACGATATCAAGACATTGCAAGCTGACTTG
CTCTAAATGCACGTAGATGGAATCGAGTTTGGTTTTATTTTGCACTTTAT
GCTTGATTGCAACTCAAATTGTGACAGCTTTTGAAGAAGCGAGCCTTGGC
AACGATGTGAAGAATATCGTTCACAAATTCAACCAAGTAGACATCACAAA
TGAAAATTCGGTTGAATACAACAATCACAACCAAGAAAAAGTTCATGAGC
CCAACCCATGTCACATGGTCAACACAAAATATGGATGTTGTTGGGACCAA
AAGAATATTGCTCTTGGACCAAATGGAAAAGGGTGCCCAGcTTGCAAAGA
TCACCGACACATGAAATGTAAAAACTGGAAGAAAAATTGTCATGAAAAAA
TCGTTTCTGCTATGTGTCCTTCTACTTGTGGCTTATGTCctAACACCGCC
AAACCAGTTCAGAGAGGATGCAAAAATGACAAATTCTGGAATAAATTATG
CCCAGTTTATAAACGACTTGGATTCTGTACGCAATCAACGATATCAAGAC
ATTGCAAGCTGACTTGCTCTAAATGCACGTAGATGGAATCGAGTTTGGTT
TTATTTTGCACTTTATGCTTGATTGCAACTCAAATTGTGACAGCTTTTGA
AGAAGCGAGCCTTGGCAACGATGTGAAGAATATCGTTCACAAATTCAACC
AAGTAGACATCACAAATGAAAATTCGGTTGAATACAACAATCACAACCAA
GAAAAAGTTCATGAGCCCAACCCATGTCACATGGTCAACACAAAATATGG
ATGTTGTTGGGACCAAAAGAATATTGCTCTTGGACCAAATGGAAAAGGGT
GCCCAGcTTGCAAAGATCACCGACACATGAAATGTAAAAACTGGAAGAAA
AATTGTCATGAAAAAATCGTTTCTGCTATGTGTCCTTCTACTTGTGGCTT
ATGTCctAACACCGCCAAACCAGTTCAGAGAGGATGCAAAAATGACAAAT
TCTGGAATAAATTATGCCCAGTTTATAAACGACTTGGATTCTGTACGCAA
TCAACGATATCAAGACATTGCAAGCTGACTTGCTCTAAATGCACGTAGAT
GGAATCGAGTTTGGTTTTATTTTGCACTTTATGCTTGATTGCAACTCAAA
TTGTGACAGCTTTTGAAGAAGCGAGCCTTGGCAACGATGTGAAGAATATC
GTTCACAAATTCAACCAAGTAGACATCACAAATGAAAATTCGGTTGAATA
CAACAATCACAACCAAGAAAAAGTTCATGAGCCCAACCCATGTCACATGG
TCAACACAAAATATGGATGTTGTTGGGACCAAAAGAATATTGCTCTTGGA
CCAAATGGAAAAGGGTGCCCAGcTTGCAAAGATCACCGACACATGAAATG
TAAAAACTGGAAGAAAAATTGTCATGAAAAAATCGTTTCTGCTATGTGTC
CTTCTACTTGTGGCTTATGTCctAACACCGCCAAACCAGTTCAGAGAGGA
TGCAAAAATGACAAATTCTGGAATAAATTATGCCCAGTTTATAAACGACT
TGGATTCTGTACGCAATCAACGATATCAAGACATTGCAAGCTGACTTGCT
CTAAATGCACGTAGATGGAATCGAGTTTGGTTTTATTTTGCACTTTATGC
TTGATTGCAACTCAAATTGTGACAGCTTTTGAAGAAGCGAGCCTTGGCAA
CGATGTGAAGAATATCGTTCACAAATTCAACCAAGTAGACATCACAAATG
AAAATTCGGTTGAATACAACAATCACAACCAAGAAAAAGTTCATGAGCCC
AACCCATGTCACATGGTCAACACAAAATATGGATGTTGTTGGGACCAAAA
GAATATTGCTCTTGGACCAAATGGAAAAGGGTGCCCAGcTTGCAAAGATC
ACCGACACATGAAATGTAAAAACTGGAAGAAAAATTGTCATGAAAAAATC
GTTTCTGCTATGTGTCCTTCTACTTGTGGCTTATGTCctAACACCGCCAA
ACCAGTTCAGAGAGGATGCAAAAATGACAAATTCTGGAATAAATTATGCC
CAGTTTATAAACGACTTGGATTCTGTACGCAATCAACGATATCAAGACAT
TGCAAGCTGACTTGCTCTAAATGCACGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014211XLOC_014211Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025307-exon-sc0000531-1491911889:119689..119876TCONS_00025307-exon-sc0000531-1491911889:119689..119876Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1510915933:119689..119876TCONS_00025307-exon-sc0000531-1510915933:119689..119876Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1575043694:119689..119876TCONS_00025307-exon-sc0000531-1575043694:119689..119876Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1491911889:126503..126632TCONS_00025307-exon-sc0000531-1491911889:126503..126632Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1510915933:126503..126632TCONS_00025307-exon-sc0000531-1510915933:126503..126632Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1575043694:126503..126632TCONS_00025307-exon-sc0000531-1575043694:126503..126632Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1491911889:126923..127018TCONS_00025307-exon-sc0000531-1491911889:126923..127018Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1510915933:126923..127018TCONS_00025307-exon-sc0000531-1510915933:126923..127018Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1575043694:126923..127018TCONS_00025307-exon-sc0000531-1575043694:126923..127018Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1491911889:127177..127281TCONS_00025307-exon-sc0000531-1491911889:127177..127281Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1510915933:127177..127281TCONS_00025307-exon-sc0000531-1510915933:127177..127281Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1575043694:127177..127281TCONS_00025307-exon-sc0000531-1575043694:127177..127281Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1491911889:127629..127727TCONS_00025307-exon-sc0000531-1491911889:127629..127727Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1510915933:127629..127727TCONS_00025307-exon-sc0000531-1510915933:127629..127727Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1575043694:127629..127727TCONS_00025307-exon-sc0000531-1575043694:127629..127727Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1491911889:127908..128475TCONS_00025307-exon-sc0000531-1491911889:127908..128475Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1510915933:127908..128475TCONS_00025307-exon-sc0000531-1510915933:127908..128475Clytia hemisphaericaexon
TCONS_00025307-exon-sc0000531-1575043694:127908..128475TCONS_00025307-exon-sc0000531-1575043694:127908..128475Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025307-proteinTCONS_00025307-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000531supercontigsc0000531:119689..128475 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.32403 2.33712 0.575615 0.3218 2.54644 2.01223 2.3343 3.54026 1.04041 6.17824 6.32786 2.70863 45.9827 34.3855 10.4748 4.95669 17.0375 31.8802 49.0625 51.5423 30.1239 29.5922 9.95093 8.10052 3.70382 8.5249 89.7256 100.381 9.18943 6.44704
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003582ShKT_dom
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025307 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top