|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025290 ID=TCONS_00025290|Name=TCONS_00025290|organism=Clytia hemisphaerica|type=transcript|length=1039bp
CACCATCTTGCAttactgtgcaaaaaatcagaaaaaacttgcaagccaat
cccgagaaaagctggtaacagacaaacgaacggacggacgaacatcaGTT
AATTTGAAGGACCTCCATGGTaggtaaaaaaaacacaaaacaagAAATTG
TGTCAAGATGTGAGCAGCGTATGTGTGATTAAATTGCTAATTATCtcttc
aaattatgtacttttaaATTCATGTGAATCTCAGCTTTTACTCACCATTA
ATAACCTTGCAAAATCGCTTAATGAGGGAAGTCAAATCGATTCCATCTTG
CTTGATTTTTCCAAAGCATTTGACAATGTAGACCATGACAAACTGTGCAT
TAAGCTCGTTCACTACGGAATAAGAGGTAATACTATCTCCAGGATTAGAA
ATTACCTTGCAAACAGAACGCAAACTGTAGTTGTTAACAGCAAGAGCTCA
GACAAAGCCATGGTATTCTGGTGTTCCCCAAGGGACAGTATTGGGACCAC
TTCTATTTCTAGTATACATAAACGATCTACCATTGTGTGTGAACTCTCAA
ATTCATCTTTTTGCGGATGTGCGGATGATGCTCTATTAtacagaaaaatt
gaatcagtCAATAACGCTTATCAACTTCAACATGATATAAATAATCTGAT
TGAGTAGGAAAGGCATTTGTCCATGGAATTCAATCCAGACAAATGCAAGG
TCCTCAGAGTCACCAATAAGCGCAAAATCATCCTATCTGACTATTCCATG
CATAGCGAGATCCTTGAGCTTGTTGACTCAAGCTAAATACCTCAACGTAT
TTATACACAAAAAGTTATCTTGGAATACCCATGTCAACTACACCTTGAAA
AAAGCCAACCAAATCAGATGCTTCCTGCAGCGTAACCTGCGTACATGTAA
CCAAGTAATCAAGCTCCAAGCTTATCGTACCTATGTGAGGCCGATTCTTG
AATATGCATCAGTTGTCTGGGATCCTCATACTTCAGCAAACATCAACCAA
TTAGAAATGGTCCAACGCAAGGCATCCAGATTTATATGT Run BLAST on NCBI transcript from alignment at sc0000529:149030..150068 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025290 ID=TCONS_00025290|Name=TCONS_00025290|organism=Clytia hemisphaerica|type=transcript|length=1039bp|location=Sequence derived from alignment at sc0000529:149030..150068 (Clytia hemisphaerica)
ACATATAAATCTGGATGCCTTGCGTTGGACCATTTCTAATTGGTTGATGT
TTGCTGAAGTATGAGGATCCCAGACAACTGATGCATATTCAAGAATCGGC
CTCACATAGGTACGATAAGCTTGGAGCTTGATTACTTGGTTACATGTACG
CAGGTTACGCTGCAGGAAGCATCTGATTTGGTTGGCTTTTTTCAAGGTGT
AGTTGACATGGGTATTCCAAGATAACTTTTTGTGTATAAATACGTTGAGG
TATTTAGCTTGAGTCAACAAGCTCAAGGATCTCGCTATGCATGGAATAGT
CAGATAGGATGATTTTGCGCTTATTGGTGACTCTGAGGACCTTGCATTTG
TCTGGATTGAATTCCATGGACAAATGCCTTTCCTACTCAATCAGATTATT
TATATCATGTTGAAGTTGATAAGCGTTATTGactgattcaatttttctgt
aTAATAGAGCATCATCCGCACATCCGCAAAAAGATGAATTTGAGAGTTCA
CACACAATGGTAGATCGTTTATGTATACTAGAAATAGAAGTGGTCCCAAT
ACTGTCCCTTGGGGAACACCAGAATACCATGGCTTTGTCTGAGCTCTTGC
TGTTAACAACTACAGTTTGCGTTCTGTTTGCAAGGTAATTTCTAATCCTG
GAGATAGTATTACCTCTTATTCCGTAGTGAACGAGCTTAATGCACAGTTT
GTCATGGTCTACATTGTCAAATGCTTTGGAAAAATCAAGCAAGATGGAAT
CGATTTGACTTCCCTCATTAAGCGATTTTGCAAGGTTATTAATGGTGAGT
AAAAGCTGAGATTCACATGAATttaaaagtacataatttgaagaGATAAT
TAGCAATTTAATCACACATACGCTGCTCACATCTTGACACAATTTcttgt
tttgtgttttttttacctACCATGGAGGTCCTTCAAATTAACtgatgttc
gtccgtccgttcgtttgtctgttaccagcttttctcgggattggcttgca
agttttttctgattttttgcacagtaaTGCAAGATGGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025290-exon-sc0000529-1491911889:149030..150068 | TCONS_00025290-exon-sc0000529-1491911889:149030..150068 | Clytia hemisphaerica | exon |
| TCONS_00025290-exon-sc0000529-1510915933:149030..150068 | TCONS_00025290-exon-sc0000529-1510915933:149030..150068 | Clytia hemisphaerica | exon |
| TCONS_00025290-exon-sc0000529-1575043694:149030..150068 | TCONS_00025290-exon-sc0000529-1575043694:149030..150068 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000529 | supercontig | sc0000529:149030..150068 . |
Blast
The following BLAST results are available for this feature:
|
