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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025280 ID=TCONS_00025280|Name=TCONS_00025280|organism=Clytia hemisphaerica|type=transcript|length=1707bp
ATTGTATTTCTAGTGTTGAGAAATTGTATAGCTCAAGgaaattcctttca
aaattcaacataaatattttaaaaatctaaaaacaaaattataaagatag
ttttaaaaatttgtgaCTAATAAAAGTTTCAGCAAAAGAAGAGAAGCATA
AACTGCATCAAAACTGATGCTGattcttttttggaatatttgcaaaaatt
tacaaataatgTCTGAGTTGCCTCTCACAGGGCTCCCTCTTTCATGTCAG
CCGACGAACCGTGGGTTttcaattattcaaaaataccaAACATCTTTTTC
TTCGAAATGTTTATGAAACATCTCAGAGTGAAAACTGAGAATTTGGGAAG
TAAACAAATTTGTACGATACTATACGTTTCCAAGGGTATTCTAGGCCCCT
AAGGTACCTACCATCTTGGCAGTCACGAATTTAACAACTTTAACTTTGCA
AAAGATTCTTATGCTGCTCCAAAGCACTTAAATATTGCTCAATTTTTGAC
AACAACCAGGAGTGTTTCTCTACCCTTCATTAGTTTTATACTTTTCATTC
ACATCCGATTTTTCACCTCGTTTGTAACTTGATCGAACTACAAAAAGTAT
CTCGATGCAATCCCAAAATTTACTGTTTTTGctcataaaaataaataatg
tgACCTTCTTTGTTTCAAAGCTCTCATATTTGATGATCTTTGGAATTGAA
AACTCTACATCAACCTTAACTTCCTCCTCATCAAATGAAGCATGAACTTT
CTGCTTTCGATGAACTCACTTCACAGCTTTCAAGTCACAACAATAGTTGG
GTCTCTTCTCCTCAAAATGTCATGTCGCtcttcaaaatcaaccaacagTG
GAATCCAGTGTCTTTTCATGTCTGCGTTTTGCGCCAAGGATATCTCTGAA
ATTGGTAGATTTAAGGTAGCAATGTCTCTGTAGAATTTAAAACGATTTTT
GATGTCTGTTTCGGCATTACTTTCTAAATCTGCTTTGTTTGCTATGATGA
GGATCGGAACATTTGTACCTTTAATGTTTTTCAAATCGTTTAAGGTTCGA
TAGATGACGGATAGACCACTAGATGAGGCCAACGAAAAGACGAGAATGAA
CGTATCGCTGTTACGTATGACCGTTTCGTAGAGATGCGGGAAGGTTTCAC
GTAGGTTTCCCGGCGTGTCGTGAACGGAAAGTTCATGTTTACAAGAAATA
CCTTTCGAATTCAACGAGATATCCACGTTGTAATATTCTGTTGCACGCTC
GAAGCCATCTGGATACATTTTGGAGGTGAGTTTTCTACAAATTGTTGTTT
TTCCTGATGCAACCTCCCCAAGCACAGCCACTGtatttgaaagttgaaaa
attctCGATTGTGCTCGTGTGCGACGCACTGTCTTTCTGAGCAAAAATTT
CTTGGAAGCTCTCAACTTTTTGCGTATCTTCCAAGGCATTTTGATGAACC
GCGAGCTCATTCAGATATTGAAAAATAGATGTTACACTGTTTTCAATTTC
GCACTCAAGTGTCACTTGTTACTACTTCCCACTCTCTCAatctttaatta
aaaaatctatCTGTCCTTCATGCACCAATATCTGACCAAATCACATGTAA
ATATATGCGGAATGAACTATGTAAGCAATAAATCGACTTTCGTTGACGTG
AAAACAATTTTGGTCGCTTTATAATTGTTTAGTtgtcgtcgaaaaaaaat
atttttt Run BLAST on NCBI transcript from alignment at sc0000529:136287..137993- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025280 ID=TCONS_00025280|Name=TCONS_00025280|organism=Clytia hemisphaerica|type=transcript|length=1707bp|location=Sequence derived from alignment at sc0000529:136287..137993- (Clytia hemisphaerica)
ATTGTATTTCTAGTGTTGAGAAATTGTATAGCTCAAGGAAATTCCTTTCA
AAATTCAACATAAATATTTTAAAAATCTAAAAACAAAATTATAAAGATAG
TTTTAAAAATTTGTGACTAATAAAAGTTTCAGCAAAAGAAGAGAAGCATA
AACTGCATCAAAACTGATGCTGATTCTTTTTTGGAATATTTGCAAAAATT
TACAAATAATGTCTGAGTTGCCTCTCACAGGGCTCCCTCTTTCATGTCAG
CCGACGAACCGTGGGTTTTCAATTATTCAAAAATACCAAACATCTTTTTC
TTCGAAATGTTTATGAAACATCTCAGAGTGAAAACTGAGAATTTGGGAAG
TAAACAAATTTGTACGATACTATACGTTTCCAAGGGTATTCTAGGCCCCT
AAGGTACCTACCATCTTGGCAGTCACGAATTTAACAACTTTAACTTTGCA
AAAGATTCTTATGCTGCTCCAAAGCACTTAAATATTGCTCAATTTTTGAC
AACAACCAGGAGTGTTTCTCTACCCTTCATTAGTTTTATACTTTTCATTC
ACATCCGATTTTTCACCTCGTTTGTAACTTGATCGAACTACAAAAAGTAT
CTCGATGCAATCCCAAAATTTACTGTTTTTGCTCATAAAAATAAATAATG
TGACCTTCTTTGTTTCAAAGCTCTCATATTTGATGATCTTTGGAATTGAA
AACTCTACATCAACCTTAACTTCCTCCTCATCAAATGAAGCATGAACTTT
CTGCTTTCGATGAACTCACTTCACAGCTTTCAAGTCACAACAATAGTTGG
GTCTCTTCTCCTCAAAATGTCATGTCGCTCTTCAAAATCAACCAACAGTG
GAATCCAGTGTCTTTTCATGTCTGCGTTTTGCGCCAAGGATATCTCTGAA
ATTGGTAGATTTAAGGTAGCAATGTCTCTGTAGAATTTAAAACGATTTTT
GATGTCTGTTTCGGCATTACTTTCTAAATCTGCTTTGTTTGCTATGATGA
GGATCGGAACATTTGTACCTTTAATGTTTTTCAAATCGTTTAAGGTTCGA
TAGATGACGGATAGACCACTAGATGAGGCCAACGAAAAGACGAGAATGAA
CGTATCGCTGTTACGTATGACCGTTTCGTAGAGATGCGGGAAGGTTTCAC
GTAGGTTTCCCGGCGTGTCGTGAACGGAAAGTTCATGTTTACAAGAAATA
CCTTTCGAATTCAACGAGATATCCACGTTGTAATATTCTGTTGCACGCTC
GAAGCCATCTGGATACATTTTGGAGGTGAGTTTTCTACAAATTGTTGTTT
TTCCTGATGCAACCTCCCCAAGCACAGCCACTGTATTTGAAAGTTGAAAA
ATTCTCGATTGTGCTCGTGTGCGACGCACTGTCTTTCTGAGCAAAAATTT
CTTGGAAGCTCTCAACTTTTTGCGTATCTTCCAAGGCATTTTGATGAACC
GCGAGCTCATTCAGATATTGAAAAATAGATGTTACACTGTTTTCAATTTC
GCACTCAAGTGTCACTTGTTACTACTTCCCACTCTCTCAATCTTTAATTA
AAAAATCTATCTGTCCTTCATGCACCAATATCTGACCAAATCACATGTAA
ATATATGCGGAATGAACTATGTAAGCAATAAATCGACTTTCGTTGACGTG
AAAACAATTTTGGTCGCTTTATAATTGTTTAGTTGTCGTCGAAAAAAAAT
ATTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025280-exon-sc0000529-1575043694:136287..137993 | TCONS_00025280-exon-sc0000529-1575043694:136287..137993 | Clytia hemisphaerica | exon |
| TCONS_00025280-exon-sc0000529-1510915933:136287..137993 | TCONS_00025280-exon-sc0000529-1510915933:136287..137993 | Clytia hemisphaerica | exon |
| TCONS_00025280-exon-sc0000529-1491911889:136287..137993 | TCONS_00025280-exon-sc0000529-1491911889:136287..137993 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000529 | supercontig | sc0000529:136287..137993 - |
Blast
The following BLAST results are available for this feature:
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