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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025260 ID=TCONS_00025260|Name=TCONS_00025260|organism=Clytia hemisphaerica|type=transcript|length=801bp
atttttttatgttCATCATCAgaatttgagaatttttattTGAGACAAAA
CGGAAATTCCCCAGGATGTTTTATAACCACAAATGAATTGTAATTGCTTT
AACCAGTAAACTCTAAGTACAGTTGGTTAGAAGGGTAGATTTGTAACTCT
GAGTACAAACTCTAGACTGAAGgaggatttaaaaattaaaaaatagtcCA
AAAGGCTGAAAATGTAGCCTGGAAGCCTATAAACTCCACTTGTAGAGAAA
TTActtgggtcaaattttttcgtCAAAAAGTTTACTGGCTGGATATCAAG
GCTAATAGCAAGTGATGCTCATCGTATAAAATCATGTAATGTtgtagaaa
atcaaaaagaaggATCCGTAACTGTCTAacgaaaaagtgacaaaaataat
aGCTTGCAAAAAACAGGTGACAAAAACAATAgcttaaaagagaaaaaaat
ttggcggAAAAAAATTCGCCAAGTTCGCCAAAACTTTTTCCAGCTAAATT
AAGATTTCTAGGCCATTCGCCAAAAtcaattctcgccaaatttaaatttc
tttcacaGTAGTCTCTATTTCGCCTAAAAGCCCCCTTTTCCGTCCTTCTT
AAGCttaaatatttaataaaaaatgggtcgtaaaaattaattctcgccaa
aattagaaattttataaaatcgCCAAAACAAATTCTGCCGAATCGCACAA
AAAATTGCCGAATCTCGTTGCTATTAAGGTCGTATCTTCCGGTGTGAATA
TCTTTTTCCATGAGATAtttttaattcgatttttaaccataaaaattttc
a Run BLAST on NCBI transcript from alignment at sc0000529:15567..16450- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025260 ID=TCONS_00025260|Name=TCONS_00025260|organism=Clytia hemisphaerica|type=transcript|length=884bp|location=Sequence derived from alignment at sc0000529:15567..16450- (Clytia hemisphaerica)
ATTTTTTTATGTTCATCATCAGAATTTGAGAATTTTTATTTGAGACAAAA
CGGAAATTCCCCAGGATGTTTTATAACCACAAATGAATTGTAATTGCTTT
AACCAGTAAACTCTAAGTACAGTTGGTTAGAAGGGTAGATTTGTAACTCT
GAGTACAAACTCTAGACTGAAGGAGGATTTAAAAATTAAAAAATAGTCCA
AAAGGCTGAAAATGTAGCCTGGAAGCCTATAAACTCCACTTGTAGAGAAA
TTACTTGGGTCAAATTTTTTCGTCAAAAAGTTTACTGGCTGGATATCAAG
GCTAATAGCAAGTGATGCTCATCGTATAAAATCATGTAATGTTGTAGAAA
ATCAAAAAGAAGGATCCGTAACTGTCTAACGAAAAAGTGACAAAAATAAT
AGCTTGCAAAAAACAGGTGACAAAAACAATAGCTTAAAAGAGAAAAAAAT
TTGGCGGAAAAATTTTTTGGCGAGTTTGGCGAATTGTCTCAAGNAACAGG
TGACAAAAACAATAGCTTAAAAGAGAAAAAAATTTGGCGGAAAAAAATTC
GCCAAGTTCGCCAAAACTTTTTCCAGCTAAATTAAGATTTCTAGGCCATT
CGCCAAAATCAATTCTCGCCAAATTTAAATTTCTTTCACAGTAGTCTCTA
TTTCGCCTAAAAGCCCCCTTTTCCGTCCTTCTTAAGCTTAAATATTTAAT
AAAAAATGGGTCGTAAAAATTAATTCTCGCCAAAATTAGAAATTTTATAA
AATCGCCAAAACAAATTCTGCCGAATCGCACAAAAAATTGCCGAATCTCG
TTGCTATTAAGGTCGTATCTTCCGGTGTGAATATCTTTTTCCATGAGATA
TTTTTAATTCGATTTTTAACCATAAAAATTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025260-exon-sc0000529-1575043694:16035..16450 | TCONS_00025260-exon-sc0000529-1575043694:16035..16450 | Clytia hemisphaerica | exon |
| TCONS_00025260-exon-sc0000529-1575043694:15567..15951 | TCONS_00025260-exon-sc0000529-1575043694:15567..15951 | Clytia hemisphaerica | exon |
| TCONS_00025260-exon-sc0000529-1510915933:16035..16450 | TCONS_00025260-exon-sc0000529-1510915933:16035..16450 | Clytia hemisphaerica | exon |
| TCONS_00025260-exon-sc0000529-1510915933:15567..15951 | TCONS_00025260-exon-sc0000529-1510915933:15567..15951 | Clytia hemisphaerica | exon |
| TCONS_00025260-exon-sc0000529-1491911889:16035..16450 | TCONS_00025260-exon-sc0000529-1491911889:16035..16450 | Clytia hemisphaerica | exon |
| TCONS_00025260-exon-sc0000529-1491911889:15567..15951 | TCONS_00025260-exon-sc0000529-1491911889:15567..15951 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000529 | supercontig | sc0000529:15567..16450 - |
Blast
The following BLAST results are available for this feature:
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