TCONS_00025243 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025243
Unique NameTCONS_00025243
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2984

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025243 ID=TCONS_00025243|Name=TCONS_00025243|organism=Clytia hemisphaerica|type=transcript|length=2984bp
TTAAAAAAATAATAATACAATGGTTTTTTGCTTCAACTGTGGCATTGATT
GTGGCAAGAAGGCAAATTTTTGTGGTGGATGTGGAACAAGTCTAAAGTTG
GAAGATGACAGTTCAGAAGTTCAAGACAGAAGAAGTTCagaagttcaaaa
caaaaaagGACCTACAACATATCCAAGGGTGCAGGAGAAAGAGCATGCCA
AAGTTCATGATAAAAAAGgaaACGTGCTCACTTATAAGGAATTCGCCAAA
TCGAAATCTTCAGCTTGGTTTCAGCGAGTTACAAAATCAgggaaaggaaa
gaaaaaaacggATGATGTTGGAATCTTTGTTGGTGTCCTAGCATGGCATA
AAGgtggtattttgaaaaaaatacacaaaaaaagaATTAGTCTTAAGCTA
TCTCCAGAATCGACTTATGATCAAACATTAAAACTTGCGAAAAAGAGAAT
AGAGGATTATTTTCCTGGAACCTTGGACTCCGAGGAACTGTATCACCTAG
CTTACGAAACCGGAGTCATTGCCTATTTTATACCAGGAACGACTACAGAT
TTTATATTGTCAAAGTACAGGGAGGACAGTGGAATAGAATACAAAGATAT
GAATCTTTGCCTTTTATCTGATACAGATAAATTAACACTCGAACACATTG
AAAAAAGTTTGATGTCAAAGAACCATGAAAAAGACGAAACGAATGACGAA
GACAAAAATGACCAGTGTCCGCCAAGTAAGAGAACAAAATCTGACTTTCC
TTACTATGATGAAGAACCAGATTTTTCAAATCTAGATGGTTATCTGTTTA
CACCCATACAGACTGTCCATCCGTTTTCTAATGATGCCGTCGACCAACAA
GCTGGGTCATCCTCATTTCAATCCTCTTTGCACTCAACAGACTCACAACA
TACCTCTTTGCCATCGACAGATTCACACCCAGACAGTACTTCTGTACAAC
AAGCGAGAACACCCTCAGACCATACCGCTTTGTCATTGCCAGACTCACAC
CCAGACAGTACTTCTGCACAACAATCCAGATCAACCTCAGGCCATACTTC
GTTGCAATCGGCAAGTTCACACCCAGACAGTACCCCTGTGTCGCAAGGAG
AACCAATCTTAAATGTCCCCCCTGTTCAAGTAGAAGAGGACAATCAAGCc
aatattttgaacaatttatccaaaaatgttaattatgatgagcaattttt
tttgaccttgcagagaaatttttctctgaatcgcgcGATTTCAGTGTGGT
CACGACAAAAAAAGCAGAGCCCTACAAACCGTTTGATGGTGACATATATT
GGGGAAAATGGTATTGATGCAGGGGCTGTCACAAGAGAATTCTTAACTAC
GTTGATGGCCAAAATTGGTACAGATTTCTTTCCTGATGGAGCACCGAAAG
AAAGTATGTTGGACGTtcaaaattgtaattttctttttattggtCAAATG
ATTGCTGTTTCTTTGTTGGAAGGTGGCCCCCCTCCTACATTTTTTCATGA
GAGTGTTTATGATTTGCTTGTTGATGATAcgataaacataaacaaattgA
ATTCAAATCACTTCACTGAAGGTgacaaattaatttttcaaacaatcagA
AATGATCCTACAGTTGCTTCCGACATAATTATAGAAAATGGATACACAGG
ATTGATTAATATGGAGAACATTGATGCTATTTTACAAACGATCATGATAA
GTATAATTTCACGCCGAAAAACCTACTTGTCAGAAATCTCAAAAGGTCTT
GAATTGTTTGGCCTTATGAATGAACTCAAACTTCATAAATCCTGTATGAA
ATCACTATTCGTGCCGTCAGAACACCAAGAAATGGACTTCAACTATTTAT
TGTCAATTATTCGTCCCCAATTTGATTCTATTGGTACCAACAGAAGGAAG
TTTCAACAGGATGTCTTAGATTTCTTCCAAGATTTCTTTTGTGAAATAGA
AGAccaaaaaatttctttaccaGATAATCTTGAGGTAGCAGCTTCAGCCG
AGCTCGACGACGAAAACACCAATGAATCATCAAACCATAATGTTATTGTA
CCTGATCTATCAATCAAAGGAATCTTAGGGTGGTTAACGGGCCAAAAACA
TAGGCCACTCTTCGGTGAACCGTTATCAATACCCTTAAAATTCGACTATG
ACTGCTACTCAAGATATCCAGAACATACAATTTGCTACCCCTACGTACAC
GCATGTTCAAGAGAATTTTCATTGCCAGTTAGTCACATTGAAACATATGC
AgattttaagaacatcttttTGACCGCCCTCTGTAAGGGACAGTCCTTTG
GAAGGCCTTAAAGcttgattttatatttttcattttatgattaaacgttt
tttatttttttcatttttttgttttactaaTTAGTAATGTGACTAATTAG
TACAATAACAagagtctttttttttgtattgGCTGTGAATTTTTACCCCA
TTCGTACGAACTTGAAACTTAAAGTATTTAAATAAATGACTGTTTCGGCC
GCCCCCGataatcttttctgaaaaatttaaatgctaTGATTTGTGCCAAT
GTTATCTaaggtttttattttcaagatacAGCCAGAATTTGAACATCaca
atttttaaataatttaaagaaaaaatcaagattttttgaaaatgtttatc
tGCAAActgttattattttatttttagattgtttttattttggtaCGATT
TGTGTGCACGCGTTTCGTAATCAGACTTGAAGGGACTGGAAGGGAGATTA
ATTAGatagttttttttatatttgcccTACAGTTACCTATAATGGTTCCG
AGGACTTCTCCAAATTTTTGGTCTCCCATTATTTTCCTAGGCAGAGTTAT
TCGTAAACCAAAATCAAAAGCTATCAGATTATGTACTTTTTATTTGCGTC
ATTTTCTCAATTggcatgaaaaaatgctttcTGACGACATTTGAAGCGAC
ATACAGGGTGGACAAATTATTGTCCATATTGTCA
Run BLAST on NCBI

protein sequence of TCONS_00025243-protein

>TCONS_00025243-protein ID=TCONS_00025243-protein|Name=TCONS_00025243-protein|organism=Clytia hemisphaerica|type=polypeptide|length=763bp
MVFCFNCGIDCGKKANFCGGCGTSLKLEDDSSEVQDRRSSEVQNKKGPTT
YPRVQEKEHAKVHDKKGNVLTYKEFAKSKSSAWFQRVTKSGKGKKKTDDV
GIFVGVLAWHKGGILKKIHKKRISLKLSPESTYDQTLKLAKKRIEDYFPG
TLDSEELYHLAYETGVIAYFIPGTTTDFILSKYREDSGIEYKDMNLCLLS
DTDKLTLEHIEKSLMSKNHEKDETNDEDKNDQCPPSKRTKSDFPYYDEEP
DFSNLDGYLFTPIQTVHPFSNDAVDQQAGSSSFQSSLHSTDSQHTSLPST
DSHPDSTSVQQARTPSDHTALSLPDSHPDSTSAQQSRSTSGHTSLQSASS
HPDSTPVSQGEPILNVPPVQVEEDNQANILNNLSKNVNYDEQFFLTLQRN
FSLNRAISVWSRQKKQSPTNRLMVTYIGENGIDAGAVTREFLTTLMAKIG
TDFFPDGAPKESMLDVQNCNFLFIGQMIAVSLLEGGPPPTFFHESVYDLL
VDDTININKLNSNHFTEGDKLIFQTIRNDPTVASDIIIENGYTGLINMEN
IDAILQTIMISIISRRKTYLSEISKGLELFGLMNELKLHKSCMKSLFVPS
EHQEMDFNYLLSIIRPQFDSIGTNRRKFQQDVLDFFQDFFCEIEDQKISL
PDNLEVAASAELDDENTNESSNHNVIVPDLSIKGILGWLTGQKHRPLFGE
PLSIPLKFDYDCYSRYPEHTICYPYVHACSREFSLPVSHIETYADFKNIF
LTALCKGQSFGRP
Run BLAST on NCBI

transcript from alignment at sc0000529:6927..14807+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025243 ID=TCONS_00025243|Name=TCONS_00025243|organism=Clytia hemisphaerica|type=transcript|length=7881bp|location=Sequence derived from alignment at sc0000529:6927..14807+ (Clytia hemisphaerica)
TTAAAAAAATAATAATACAATGGTTTTTTGCTTCAACTGTGGCATTGATT
GTGGCAAGAAGGCAAATTTTTGTGGTGGATGTGGAACAAGTAAGTAGTTT
GATTTGTAGAGTCCCCACCAGGTCTGTCTTTTTGACAACAGATTGAATCT
AGCAATTCCTTTGTTTGCGATTGATATTTTTTTCAAAATTTAGCGGTAAA
TTTTAGTTTCAATCTGTCATTTGTGTAAAAAACAGTCGAGCCGCTCAAGG
CCGTGCAACTTTGGTAGGATTTGTTGGCTTCAAATCCTACAAAAGAGATT
GACTTCTAGCCCTTCGGGCTTATACTTCATTGGTCAGGAGTCCCTGCATT
GAATTTCTAAAAGCAACTCGTCAGTCCTGAAAACCAAATTTGTATTACAA
TCTGGTTTtccaaaatcattttcaaatgctttttgttcgaaaagttttaa
aatttaaaaagacaaaagaatacAGAAGacctttgtagacttctgcCTTA
ACTCGATCCCAAAAGAAATAGTCCAGTGAGTTTGAATCAGGAGACTTGGG
TGGCCATTCGTTCTTATTTACAAAGCACCTGGGGATGGTTTCTTTTAAGA
ATCCTTGGATTAGATTGATAGTTTGGGAGGATGCGCCATCCTGAATGAAG
ATCCAATTTTGCCGTGGATACCTTATTAATTGCTGGAATGGTCTCGATAA
TTATTTGCATTCACCTTCAACCCTTTCTTATTGACATAGTTTGAAAGGGG
GTCACTACCCCTACCCTAGGTTCTCCCCTATTTTAAAACTTGATGCTACc
cctttcaaatttttcaaatcctaCCATGATTATACCGGTGAAAAAGCAAG
AacaaataaaactttaaaataaaaaatcattttgaatcGAATGTTTCGAA
CATACTAAACAATaaagaaagaagacattgcattttaaatcaaaacttCT
ATTTTtgggaaaacacaaaaaatcataattgaCATCCCAACCCCCCCTTT
CTAGATGAACCTTCCCCTTTCTGAAAATTTCcccctttctacaaaaaaat
ctcttacccccccccctttcagAGATTTGAAGAACATTGTTACCCCCCTT
ATAAAGGGGGGTGCGAACTATGATCAGTATGATTGACAAAAATCGGTTTC
GTAACCATGTCATTGCAGCCGAAATCATGACTGATGTTTTATGAACCCTA
ACTTTCGATTTTACAATcatataaaataattcaaaaaataggGAATGCCT
TAAAATCATACACACANTTCGATTTTACAATCATattaaataattcaaaa
aataggGAATGCCTTAAAATCATACACACAAAGACCAAAAAATATGGACT
GAAGTTTTTACTTCACTGATTGGTTATCTGAGGTAATAGAGATGgcgcat
tctttagaaaaagtaacaaaattgtttttactGCATCTTTATGACCCACc
gaatcaaataagagcttgtaaaaactgcAGCTTACCCAAAATATACAACC
CACAAaactggcatagtgactttccatTTGTTTTCACATGTTTTactaaa
taaattttgagaattcttTGCATACCACCAACCCATTTCAGAAAAGTGCT
CAGTAGTGGTATTTTCAGGTCATTTTTACACCCTACCATATTTTGATCTT
CTTAgatccatttttttcaaaagtactTATCTTTGCAACATAAAATCCAT
CTTCAAGGGACCCTTGATTGTGTATGTTGAACTATTATTAGTCTTCAGGT
GTCCTTGTCCTGCATAGCTTAtgctgattttttcttttcgtaGGTCTAAA
GTTGGAAGATGACAGTTCAGAAGTTCAAGACAGAAGAAGTTCagaagttc
aaaacaaaaaaggtgAACTtaaaaaatgccagaaatatactGGTTTTTTT
AGTTCATTTTGGAAAACTTATGTCCatagcaaaataatttttcaaatttt
ttttcatttaagatctttgagctaatttttttgttattaaatgTTTCTGA
GTGAAATCGGTATCGAATGGGGGTTTTTTACCCGTGCGTGAGttacataa
atattttttggatttaaatactaattgtttattttgttatCACTCTATTA
AATTGTTgtctgatttttttatttccataGGACCTACAACATATCCAAGG
GTGCAGGAGAAAGAGCATGCCAAAGTTCATGATAAAAAAGGTATCAAGTT
TTTAAAAGTGTAGTTTACTAAACATAATCTTAAAATTCAAGATAACATAG
GATAACATGTTCCTGCCAGCCGACTGACCTTGATTACTACTAAAAGCTGG
AAAGCATTTTCCTAATTTGATAATTTTGTGCTTTGACAAAAAATGCTTCT
GTCATTAAGAATAGAAATTTAAAATAAGCTTAACCCTCTCCCCCGCCTAA
AACCCAAAATTAGATTCTCATTGATGTTTTCCTGAAATATTAGTCTGGCT
GAAAttagacaggaacccgtctgcttatttcttttaaatctgatgaatac
ttgacgggtcagagctgtgagtccgattttggcctaaaaaaaattacagt
gggaaattcgaatttaacgctgtcctcacttactaaaataaaaaccaaat
ttcggaagttgcgcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgtttttgatt
ttgactttttgttgtcTTGATAATTTCTAGAGACTTCTAGGctaagaaaa
atcacaaaagtaAAAGCAACCAAGAGACAAACCATGAGCACGAAGCCTAG
GAAGGAACCACCCCGTGTGGTTCAACAGGAATGTGCCGTTGAGATTAGAA
AAACGGGTCCTAAGGATGACTcagttttgattgattttttgctaaaattt
gaaaaaagttccaaattAAGACATTTACTATGGTATTTGAGTGAAATTGT
GTGTGAAGGGCTTTACGGACGCAGTTCGACTCACAAATCCTGTCCAGATG
TGAcgtgaagataaaaaaaagtgatgCAGATTTTTCATAATGGGGATTCT
GTATTTTATTTAAATTGTCGCACTCTTGcgctggagaaaatatctttcgG
CGGCAAACCTATTCTTTAAGGAAGATAGAGTGAATCAACTTTTGTCCTGG
AGGGAAGTGAATATTTTCACCTTGAAAAAATGGGGGATTTCAGAAAACTT
TATGGAAAGTGGGGGTAGAAAGAGCAAAAATTAGGTATAATAAATAGATG
ATTAAAAATGTGTCTATTTTTCTAGCATTCGTGTGGTCATTGCaggaaat
tgttatttttgttaggTTATTATGGTCCTAATGGGGAACCCCGGGAAATG
GGTAGGTGGGGGAGAAGACCAAATAGGTAGTTTTAGTCCTCAGATGGGGG
AACCTGAAAACCTGAGGGACACCATGATCCAAAATACTCTGCGTTGAAGG
TTTTATCAAATGCAGATGAATGactgtgttttttattttactttattgtt
ttctttttcttttaggaaACGTGCTCACTTATAAGGAATTCGCCAAATCG
AAATCTTCAGCTTGGTTTCAGCGAGTTACAAAATCAgggaaaggaaagaa
aaaaacggATGATGTTGGAATCTTTGTTGGTGTCCTAGCATGGCATAAAG
gtggtattttgaaaaaaatacacaaaaaaagaATTAGTCTTAAGCTATCT
CCAGAATCGACTTATGATCAAACATTAAAACTTGCGAAAAAGAGAATAGA
GGATTATTTTCCTGGAACCTTGGACTCCGAGGAACTGTATCACCTAGCTT
ACGAAACCGGAGTCATTGCCTATTTTATACCAGGAACGACTACAGATTTT
ATATTGTCAAAGTACAGGGAGGACAGTGGAATAGAATACAAAGATATGAA
TCTTTGCCTTTTATCTGATACAGATAAATTAACACTCGAACACATTGAAA
AAAGTTTGATGTCAAAGAACCATGAAAAAGACGAAACGAATGACGAAGAC
AAAAATGACCAGTGTCCGCCAAGTAAGAGAACAAAATCTGACTTTCCTTA
CTATGATGAAGAACCAGATTTTTCAAATCTAGATGGTTATCTGTTTACAC
CCATACAGACTGTCCATCCGTTTTCTAATGATGCCGTCGACCAACAAGCT
GGGTCATCCTCATTTCAATCCTCTTTGCACTCAACAGACTCACAACATAC
CTCTTTGCCATCGACAGATTCACACCCAGACAGTACTTCTGTACAACAAG
CGAGAACACCCTCAGACCATACCGCTTTGTCATTGCCAGACTCACACCCA
GACAGTACTTCTGCACAACAATCCAGATCAACCTCAGGCCATACTTCGTT
GCAATCGGCAAGTTCACACCCAGACAGTACCCCTGTGTCGCAAGGAGAAC
CAATCTTAAATGTCCCCCCTGTTCAAGTAGAAGAGGACAATCAAGCcaat
attttgaacaatttatccaaaaatgttaattatgatgagcaatttttttt
gaccttgcagagaaatttttctctgaatcgcgcGATTTCAGTGTGGTCAC
GACAAAAAAAGCAGAGCCCTACAAACCGTTTGATGGTGACATATATTGGG
GAAAATGGTATTGATGCAGGGGCTGTCACAAGAGAATTCTTAACTACGTT
GATGGCCAAAATTGGTACAGATTTCTTTCCTGATGGAGCACCGAAAGAAA
GTATGTTGGACGTtcaaaattgtaattttctttttattggtCAAATGATT
GCTGTTTCTTTGTTGGAAGGTGGCCCCCCTCCTACATTTTTTCATGAGAG
TGTTTATGATTTGCTTGTTGATGATAcgataaacataaacaaattgAATT
CAAATCACTTCACTGAAGGTgacaaattaatttttcaaacaatcagAAAT
GATCCTACAGTTGCTTCCGACATAATTATAGAAAATGGATACACAGGATT
GATTAATATGGAGAACATTGATGCTATTTTACAAACGATCATGATAAGTA
TAATTTCACGCCGAAAAACCTACTTGTCAGAAATCTCAAAAGGTCTTGAA
TTGTTTGGCCTTATGAATGAACTCAAACTTCATAAATCCTGTATGAAATC
ACTATTCGTGCCGTCAGAACACCAAGAAATGGACTTCAACTATTTATTGT
CAATTATTCGTCCCCAATTTGATTCTATTGGTACCAACAGAAGGAAGTTT
CAACAGGATGTCTTAGATTTCTTCCAAGATTTCTTTTGTGAAATAGAAGA
ccaaaaaatttctttaccaGATAATCTTGAGGTAGCAGCTTCAGCCGAGC
TCGACGACGAAAACACCAATGAATCATCAAACCATAATGTTATTGTACCT
GATCTATCAATCAAAGGAATCTTAGGGTGGTTAACGGGCCAAAAACATAG
GCCACTCTTCGGTGAACCGTTATCAATACCCTTAAAATTCGACTATGACT
GCTACTCAAGATATCCAGAACATACAATTTGCTACCCCTACGTACACGCA
TGTTCAAGAGAATTTTCATTGCCAGTTAGTCACATTGAAACATATGCAga
ttttaagaacatcttttTGACCGCCCTCTGTAAGGGACAGTCCTTTGGAA
GGCCTTAAAGcttgattttatatttttcattttatgattaaacgtttttt
atttttttcatttttttgttttactaaTTAGTAATGTGACTAATTAGTAC
AATAACAagagtctttttttttgtattgGCTGTGAATTTTTACCCCATTC
GTACGAACTTGAAACTTAAAGTATTTAAATAAATGACTGTTTCGGCCGCC
CCCGataatcttttctgaaaaatttaaatgctaTGATTTGTGCCAATGTT
ATCTaaggtttttattttcaagatacAGCCAGAATTTGAACATCacaatt
tttaaataatttaaagaaaaaatcaagattttttgaaaatgtttatctGC
AAActgttattattttatttttagattgtttttattttggtaCGATTTGT
GTGCACGCGTTTCGTAATCAGACTTGAAGGGACTGGAAGGGAGATTAATT
AGatagttttttttatatttgcccTACAGTTACCTATAATGGTTCCGAGG
ACTTCTCCAAATTTTTGGTCTCCCATTATTTTCCTAGGCAGAGTTATTCG
TAAACCAAAATCAAAAGCTATCAGATTATGTACTTTTTATTTGCGTCATT
TTCTCAATTggcatgaaaaaatgctttcTGACGACATTTGAAGCGACATA
CAGGGTGGACAAATTATTGTCCATATTGTCA

Coding sequence (CDS) from alignment at sc0000529:6927..14807+

>TCONS_00025243 ID=TCONS_00025243|Name=TCONS_00025243|organism=Clytia hemisphaerica|type=CDS|length=9168bp|location=Sequence derived from alignment at sc0000529:6927..14807+ (Clytia hemisphaerica)
ATGGTTTTTTGCTTCAACTGTGGCATTGATTGTGGCAAGAAGGCAAATTT
TTGTGGTGGATGTGGAACAAGTCTAAAGTTGGAAGATGACAGTTCAGAAG
TTCAAGACAGAAGAAGTTCagaagttcaaaacaaaaaagGACCTACAACA
TATCCAAGGGTGCAGGAGAAAGAGCATGCCAAAGTTCATGATAAAAAAGg
aaACGTGCTCACTTATAAGGAATTCGCCAAATCGAAATCTTCAGCTTGGT
TTCAGCGAGTTACAAAATCAgggaaaggaaagaaaaaaacggATGATGTT
GGAATCTTTGTTGGTGTCCTAGCATGGCATAAAGgtggtattttgaaaaa
aatacacaaaaaaagaATTAGTCTTAAGCTATCTCCAGAATCGACTTATG
ATCAAACATTAAAACTTGCGAAAAAGAGAATAGAGGATTATTTTCCTGGA
ACCTTGGACTCCGAGGAACTGTATCACCTAGCTTACGAAACCGGAGTCAT
TGCCTATTTTATACCAGGAACGACTACAGATTTTATATTGTCAAAGTACA
GGGAGGACAGTGGAATAGAATACAAAGATATGAATCTTTGCCTTTTATCT
GATACAGATAAATTAACACTCGAACACATTGAAAAAAGTTTGATGTCAAA
GAACCATGAAAAAGACGAAACGAATGACGAAGACAAAAATGACCAGTGTC
CGCCAAGTAAGAGAACAAAATCTGACTTTCCTTACTATGATGAAGAACCA
GATTTTTCAAATCTAGATGGTTATCTGTTTACACCCATACAGACTGTCCA
TCCGTTTTCTAATGATGCCGTCGACCAACAAGCTGGGTCATCCTCATTTC
AATCCTCTTTGCACTCAACAGACTCACAACATACCTCTTTGCCATCGACA
GATTCACACCCAGACAGTACTTCTGTACAACAAGCGAGAACACCCTCAGA
CCATACCGCTTTGTCATTGCCAGACTCACACCCAGACAGTACTTCTGCAC
AACAATCCAGATCAACCTCAGGCCATACTTCGTTGCAATCGGCAAGTTCA
CACCCAGACAGTACCCCTGTGTCGCAAGGAGAACCAATCTTAAATGTCCC
CCCTGTTCAAGTAGAAGAGGACAATCAAGCcaatattttgaacaatttat
ccaaaaatgttaattatgatgagcaattttttttgaccttgcagagaaat
ttttctctgaatcgcgcGATTTCAGTGTGGTCACGACAAAAAAAGCAGAG
CCCTACAAACCGTTTGATGGTGACATATATTGGGGAAAATGGTATTGATG
CAGGGGCTGTCACAAGAGAATTCTTAACTACGTTGATGGCCAAAATTGGT
ACAGATTTCTTTCCTGATGGAGCACCGAAAGAAAGTATGTTGGACGTtca
aaattgtaattttctttttattggtCAAATGATTGCTGTTTCTTTGTTGG
AAGGTGGCCCCCCTCCTACATTTTTTCATGAGAGTGTTTATGATTTGCTT
GTTGATGATAcgataaacataaacaaattgAATTCAAATCACTTCACTGA
AGGTgacaaattaatttttcaaacaatcagAAATGATCCTACAGTTGCTT
CCGACATAATTATAGAAAATGGATACACAGGATTGATTAATATGGAGAAC
ATTGATGCTATTTTACAAACGATCATGATAAGTATAATTTCACGCCGAAA
AACCTACTTGTCAGAAATCTCAAAAGGTCTTGAATTGTTTGGCCTTATGA
ATGAACTCAAACTTCATAAATCCTGTATGAAATCACTATTCGTGCCGTCA
GAACACCAAGAAATGGACTTCAACTATTTATTGTCAATTATTCGTCCCCA
ATTTGATTCTATTGGTACCAACAGAAGGAAGTTTCAACAGGATGTCTTAG
ATTTCTTCCAAGATTTCTTTTGTGAAATAGAAGAccaaaaaatttcttta
ccaGATAATCTTGAGGTAGCAGCTTCAGCCGAGCTCGACGACGAAAACAC
CAATGAATCATCAAACCATAATGTTATTGTACCTGATCTATCAATCAAAG
GAATCTTAGGGTGGTTAACGGGCCAAAAACATAGGCCACTCTTCGGTGAA
CCGTTATCAATACCCTTAAAATTCGACTATGACTGCTACTCAAGATATCC
AGAACATACAATTTGCTACCCCTACGTACACGCATGTTCAAGAGAATTTT
CATTGCCAGTTAGTCACATTGAAACATATGCAgattttaagaacatcttt
tTGACCGCCCTCTGTAAGGGACAGTCCTTTGGAAGGCCTTAAATGGTTTT
TTGCTTCAACTGTGGCATTGATTGTGGCAAGAAGGCAAATTTTTGTGGTG
GATGTGGAACAAGTCTAAAGTTGGAAGATGACAGTTCAGAAGTTCAAGAC
AGAAGAAGTTCagaagttcaaaacaaaaaagGACCTACAACATATCCAAG
GGTGCAGGAGAAAGAGCATGCCAAAGTTCATGATAAAAAAGgaaACGTGC
TCACTTATAAGGAATTCGCCAAATCGAAATCTTCAGCTTGGTTTCAGCGA
GTTACAAAATCAgggaaaggaaagaaaaaaacggATGATGTTGGAATCTT
TGTTGGTGTCCTAGCATGGCATAAAGgtggtattttgaaaaaaatacaca
aaaaaagaATTAGTCTTAAGCTATCTCCAGAATCGACTTATGATCAAACA
TTAAAACTTGCGAAAAAGAGAATAGAGGATTATTTTCCTGGAACCTTGGA
CTCCGAGGAACTGTATCACCTAGCTTACGAAACCGGAGTCATTGCCTATT
TTATACCAGGAACGACTACAGATTTTATATTGTCAAAGTACAGGGAGGAC
AGTGGAATAGAATACAAAGATATGAATCTTTGCCTTTTATCTGATACAGA
TAAATTAACACTCGAACACATTGAAAAAAGTTTGATGTCAAAGAACCATG
AAAAAGACGAAACGAATGACGAAGACAAAAATGACCAGTGTCCGCCAAGT
AAGAGAACAAAATCTGACTTTCCTTACTATGATGAAGAACCAGATTTTTC
AAATCTAGATGGTTATCTGTTTACACCCATACAGACTGTCCATCCGTTTT
CTAATGATGCCGTCGACCAACAAGCTGGGTCATCCTCATTTCAATCCTCT
TTGCACTCAACAGACTCACAACATACCTCTTTGCCATCGACAGATTCACA
CCCAGACAGTACTTCTGTACAACAAGCGAGAACACCCTCAGACCATACCG
CTTTGTCATTGCCAGACTCACACCCAGACAGTACTTCTGCACAACAATCC
AGATCAACCTCAGGCCATACTTCGTTGCAATCGGCAAGTTCACACCCAGA
CAGTACCCCTGTGTCGCAAGGAGAACCAATCTTAAATGTCCCCCCTGTTC
AAGTAGAAGAGGACAATCAAGCcaatattttgaacaatttatccaaaaat
gttaattatgatgagcaattttttttgaccttgcagagaaatttttctct
gaatcgcgcGATTTCAGTGTGGTCACGACAAAAAAAGCAGAGCCCTACAA
ACCGTTTGATGGTGACATATATTGGGGAAAATGGTATTGATGCAGGGGCT
GTCACAAGAGAATTCTTAACTACGTTGATGGCCAAAATTGGTACAGATTT
CTTTCCTGATGGAGCACCGAAAGAAAGTATGTTGGACGTtcaaaattgta
attttctttttattggtCAAATGATTGCTGTTTCTTTGTTGGAAGGTGGC
CCCCCTCCTACATTTTTTCATGAGAGTGTTTATGATTTGCTTGTTGATGA
TAcgataaacataaacaaattgAATTCAAATCACTTCACTGAAGGTgaca
aattaatttttcaaacaatcagAAATGATCCTACAGTTGCTTCCGACATA
ATTATAGAAAATGGATACACAGGATTGATTAATATGGAGAACATTGATGC
TATTTTACAAACGATCATGATAAGTATAATTTCACGCCGAAAAACCTACT
TGTCAGAAATCTCAAAAGGTCTTGAATTGTTTGGCCTTATGAATGAACTC
AAACTTCATAAATCCTGTATGAAATCACTATTCGTGCCGTCAGAACACCA
AGAAATGGACTTCAACTATTTATTGTCAATTATTCGTCCCCAATTTGATT
CTATTGGTACCAACAGAAGGAAGTTTCAACAGGATGTCTTAGATTTCTTC
CAAGATTTCTTTTGTGAAATAGAAGAccaaaaaatttctttaccaGATAA
TCTTGAGGTAGCAGCTTCAGCCGAGCTCGACGACGAAAACACCAATGAAT
CATCAAACCATAATGTTATTGTACCTGATCTATCAATCAAAGGAATCTTA
GGGTGGTTAACGGGCCAAAAACATAGGCCACTCTTCGGTGAACCGTTATC
AATACCCTTAAAATTCGACTATGACTGCTACTCAAGATATCCAGAACATA
CAATTTGCTACCCCTACGTACACGCATGTTCAAGAGAATTTTCATTGCCA
GTTAGTCACATTGAAACATATGCAgattttaagaacatcttttTGACCGC
CCTCTGTAAGGGACAGTCCTTTGGAAGGCCTTAAATGGTTTTTTGCTTCA
ACTGTGGCATTGATTGTGGCAAGAAGGCAAATTTTTGTGGTGGATGTGGA
ACAAGTCTAAAGTTGGAAGATGACAGTTCAGAAGTTCAAGACAGAAGAAG
TTCagaagttcaaaacaaaaaagGACCTACAACATATCCAAGGGTGCAGG
AGAAAGAGCATGCCAAAGTTCATGATAAAAAAGgaaACGTGCTCACTTAT
AAGGAATTCGCCAAATCGAAATCTTCAGCTTGGTTTCAGCGAGTTACAAA
ATCAgggaaaggaaagaaaaaaacggATGATGTTGGAATCTTTGTTGGTG
TCCTAGCATGGCATAAAGgtggtattttgaaaaaaatacacaaaaaaaga
ATTAGTCTTAAGCTATCTCCAGAATCGACTTATGATCAAACATTAAAACT
TGCGAAAAAGAGAATAGAGGATTATTTTCCTGGAACCTTGGACTCCGAGG
AACTGTATCACCTAGCTTACGAAACCGGAGTCATTGCCTATTTTATACCA
GGAACGACTACAGATTTTATATTGTCAAAGTACAGGGAGGACAGTGGAAT
AGAATACAAAGATATGAATCTTTGCCTTTTATCTGATACAGATAAATTAA
CACTCGAACACATTGAAAAAAGTTTGATGTCAAAGAACCATGAAAAAGAC
GAAACGAATGACGAAGACAAAAATGACCAGTGTCCGCCAAGTAAGAGAAC
AAAATCTGACTTTCCTTACTATGATGAAGAACCAGATTTTTCAAATCTAG
ATGGTTATCTGTTTACACCCATACAGACTGTCCATCCGTTTTCTAATGAT
GCCGTCGACCAACAAGCTGGGTCATCCTCATTTCAATCCTCTTTGCACTC
AACAGACTCACAACATACCTCTTTGCCATCGACAGATTCACACCCAGACA
GTACTTCTGTACAACAAGCGAGAACACCCTCAGACCATACCGCTTTGTCA
TTGCCAGACTCACACCCAGACAGTACTTCTGCACAACAATCCAGATCAAC
CTCAGGCCATACTTCGTTGCAATCGGCAAGTTCACACCCAGACAGTACCC
CTGTGTCGCAAGGAGAACCAATCTTAAATGTCCCCCCTGTTCAAGTAGAA
GAGGACAATCAAGCcaatattttgaacaatttatccaaaaatgttaatta
tgatgagcaattttttttgaccttgcagagaaatttttctctgaatcgcg
cGATTTCAGTGTGGTCACGACAAAAAAAGCAGAGCCCTACAAACCGTTTG
ATGGTGACATATATTGGGGAAAATGGTATTGATGCAGGGGCTGTCACAAG
AGAATTCTTAACTACGTTGATGGCCAAAATTGGTACAGATTTCTTTCCTG
ATGGAGCACCGAAAGAAAGTATGTTGGACGTtcaaaattgtaattttctt
tttattggtCAAATGATTGCTGTTTCTTTGTTGGAAGGTGGCCCCCCTCC
TACATTTTTTCATGAGAGTGTTTATGATTTGCTTGTTGATGATAcgataa
acataaacaaattgAATTCAAATCACTTCACTGAAGGTgacaaattaatt
tttcaaacaatcagAAATGATCCTACAGTTGCTTCCGACATAATTATAGA
AAATGGATACACAGGATTGATTAATATGGAGAACATTGATGCTATTTTAC
AAACGATCATGATAAGTATAATTTCACGCCGAAAAACCTACTTGTCAGAA
ATCTCAAAAGGTCTTGAATTGTTTGGCCTTATGAATGAACTCAAACTTCA
TAAATCCTGTATGAAATCACTATTCGTGCCGTCAGAACACCAAGAAATGG
ACTTCAACTATTTATTGTCAATTATTCGTCCCCAATTTGATTCTATTGGT
ACCAACAGAAGGAAGTTTCAACAGGATGTCTTAGATTTCTTCCAAGATTT
CTTTTGTGAAATAGAAGAccaaaaaatttctttaccaGATAATCTTGAGG
TAGCAGCTTCAGCCGAGCTCGACGACGAAAACACCAATGAATCATCAAAC
CATAATGTTATTGTACCTGATCTATCAATCAAAGGAATCTTAGGGTGGTT
AACGGGCCAAAAACATAGGCCACTCTTCGGTGAACCGTTATCAATACCCT
TAAAATTCGACTATGACTGCTACTCAAGATATCCAGAACATACAATTTGC
TACCCCTACGTACACGCATGTTCAAGAGAATTTTCATTGCCAGTTAGTCA
CATTGAAACATATGCAgattttaagaacatcttttTGACCGCCCTCTGTA
AGGGACAGTCCTTTGGAAGGCCTTAAATGGTTTTTTGCTTCAACTGTGGC
ATTGATTGTGGCAAGAAGGCAAATTTTTGTGGTGGATGTGGAACAAGTCT
AAAGTTGGAAGATGACAGTTCAGAAGTTCAAGACAGAAGAAGTTCagaag
ttcaaaacaaaaaagGACCTACAACATATCCAAGGGTGCAGGAGAAAGAG
CATGCCAAAGTTCATGATAAAAAAGgaaACGTGCTCACTTATAAGGAATT
CGCCAAATCGAAATCTTCAGCTTGGTTTCAGCGAGTTACAAAATCAggga
aaggaaagaaaaaaacggATGATGTTGGAATCTTTGTTGGTGTCCTAGCA
TGGCATAAAGgtggtattttgaaaaaaatacacaaaaaaagaATTAGTCT
TAAGCTATCTCCAGAATCGACTTATGATCAAACATTAAAACTTGCGAAAA
AGAGAATAGAGGATTATTTTCCTGGAACCTTGGACTCCGAGGAACTGTAT
CACCTAGCTTACGAAACCGGAGTCATTGCCTATTTTATACCAGGAACGAC
TACAGATTTTATATTGTCAAAGTACAGGGAGGACAGTGGAATAGAATACA
AAGATATGAATCTTTGCCTTTTATCTGATACAGATAAATTAACACTCGAA
CACATTGAAAAAAGTTTGATGTCAAAGAACCATGAAAAAGACGAAACGAA
TGACGAAGACAAAAATGACCAGTGTCCGCCAAGTAAGAGAACAAAATCTG
ACTTTCCTTACTATGATGAAGAACCAGATTTTTCAAATCTAGATGGTTAT
CTGTTTACACCCATACAGACTGTCCATCCGTTTTCTAATGATGCCGTCGA
CCAACAAGCTGGGTCATCCTCATTTCAATCCTCTTTGCACTCAACAGACT
CACAACATACCTCTTTGCCATCGACAGATTCACACCCAGACAGTACTTCT
GTACAACAAGCGAGAACACCCTCAGACCATACCGCTTTGTCATTGCCAGA
CTCACACCCAGACAGTACTTCTGCACAACAATCCAGATCAACCTCAGGCC
ATACTTCGTTGCAATCGGCAAGTTCACACCCAGACAGTACCCCTGTGTCG
CAAGGAGAACCAATCTTAAATGTCCCCCCTGTTCAAGTAGAAGAGGACAA
TCAAGCcaatattttgaacaatttatccaaaaatgttaattatgatgagc
aattttttttgaccttgcagagaaatttttctctgaatcgcgcGATTTCA
GTGTGGTCACGACAAAAAAAGCAGAGCCCTACAAACCGTTTGATGGTGAC
ATATATTGGGGAAAATGGTATTGATGCAGGGGCTGTCACAAGAGAATTCT
TAACTACGTTGATGGCCAAAATTGGTACAGATTTCTTTCCTGATGGAGCA
CCGAAAGAAAGTATGTTGGACGTtcaaaattgtaattttctttttattgg
tCAAATGATTGCTGTTTCTTTGTTGGAAGGTGGCCCCCCTCCTACATTTT
TTCATGAGAGTGTTTATGATTTGCTTGTTGATGATAcgataaacataaac
aaattgAATTCAAATCACTTCACTGAAGGTgacaaattaatttttcaaac
aatcagAAATGATCCTACAGTTGCTTCCGACATAATTATAGAAAATGGAT
ACACAGGATTGATTAATATGGAGAACATTGATGCTATTTTACAAACGATC
ATGATAAGTATAATTTCACGCCGAAAAACCTACTTGTCAGAAATCTCAAA
AGGTCTTGAATTGTTTGGCCTTATGAATGAACTCAAACTTCATAAATCCT
GTATGAAATCACTATTCGTGCCGTCAGAACACCAAGAAATGGACTTCAAC
TATTTATTGTCAATTATTCGTCCCCAATTTGATTCTATTGGTACCAACAG
AAGGAAGTTTCAACAGGATGTCTTAGATTTCTTCCAAGATTTCTTTTGTG
AAATAGAAGAccaaaaaatttctttaccaGATAATCTTGAGGTAGCAGCT
TCAGCCGAGCTCGACGACGAAAACACCAATGAATCATCAAACCATAATGT
TATTGTACCTGATCTATCAATCAAAGGAATCTTAGGGTGGTTAACGGGCC
AAAAACATAGGCCACTCTTCGGTGAACCGTTATCAATACCCTTAAAATTC
GACTATGACTGCTACTCAAGATATCCAGAACATACAATTTGCTACCCCTA
CGTACACGCATGTTCAAGAGAATTTTCATTGCCAGTTAGTCACATTGAAA
CATATGCAgattttaagaacatcttttTGACCGCCCTCTGTAAGGGACAG
TCCTTTGGAAGGCCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014181XLOC_014181Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025243-exon-sc0000529-1491911889:6927..7015TCONS_00025243-exon-sc0000529-1491911889:6927..7015Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1510915933:6927..7015TCONS_00025243-exon-sc0000529-1510915933:6927..7015Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1575043694:6927..7015TCONS_00025243-exon-sc0000529-1575043694:6927..7015Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1491911889:8720..8788TCONS_00025243-exon-sc0000529-1491911889:8720..8788Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1510915933:8720..8788TCONS_00025243-exon-sc0000529-1510915933:8720..8788Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1575043694:8720..8788TCONS_00025243-exon-sc0000529-1575043694:8720..8788Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1491911889:9057..9116TCONS_00025243-exon-sc0000529-1491911889:9057..9116Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1510915933:9057..9116TCONS_00025243-exon-sc0000529-1510915933:9057..9116Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1575043694:9057..9116TCONS_00025243-exon-sc0000529-1575043694:9057..9116Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1491911889:12042..14807TCONS_00025243-exon-sc0000529-1491911889:12042..14807Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1510915933:12042..14807TCONS_00025243-exon-sc0000529-1510915933:12042..14807Clytia hemisphaericaexon
TCONS_00025243-exon-sc0000529-1575043694:12042..14807TCONS_00025243-exon-sc0000529-1575043694:12042..14807Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025243-proteinTCONS_00025243-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000529supercontigsc0000529:6927..14807 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.867074	0.933569	0.303987	0.198269	7.21154	4.26161	4.39478	4.48195	1.67174	2.57073	3.15825	1.90205	1.35553	1.84252	1.24324	1.16763	1.29369	1.34353	1.13817	1.14379	1.69603	1.83774	0.634186	1.34981	1.95081	2.41611	1.24466	0.72965	0.666935	0.471481
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025243 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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