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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025207 ID=TCONS_00025207|Name=TCONS_00025207|organism=Clytia hemisphaerica|type=transcript|length=2768bp
TACAGTGTTTATATTGGAAATATCTGAAGTTGGTtgtttggttgaaaaat
ttgcaACCAGTCTTGGATTTGGAGATGTTGAAACGATGAAGCAAACAGCA
CACCAATTTAAAGCGTTTGCTAATTCTAGCGATAGAGATGAAAGTGATGT
ATCAATTGTACCTCCTAGTCAAGATGATGTTGTTGGCCCAGCACGAAAAT
CACTTTGCTCAACAGCTTTGTTTATGTCTGATGAAGAAGATGATATTCCT
TCAATGCCACGacgaaaatcaagaaaaagtagaaaatcaGTTTGTGTTTT
GCCAAAGATGGTTGTTTCTTCCTCTGAGGAAGATGATGATGAGGCTGAAA
AAGGAGATCAAGAAGTTGTTGTTGAAGAGAGTGATGATGAGATTATTATC
AGCAAACGAAAACAAACACGTAAAGTTTGTATAAGTTCTGATGATGAGGA
CAGTGGTGATGGTGAAGTTCAAGTATTTATTGAACAGCCAGATGGAACCA
AAAAGAAAGTACAAAGCTTTCTTGATGAGAGTGCAGAAGACGATCCTAAC
GATAAGGATGTTGCATCGTTGTCTAAATTGGTTAAAAAACAAACACTTTT
CGATTCTGATGAAACTGAGAGTGATGGGGAAGATTCTGCAGGTAGTCTAA
ATGATTTTATTGCCAGTGATGATGGTGATGAGGATGAGTTTTATAGCGCC
GAATCTGACGACTCTGCACATTCTAATGCTTCTGCTCAATCCAATAAAGA
AAATGATAAGGTTTTCCTATCCTCTGATGCAATTGCTATTAGTGATTCGG
AAGATGAATTTGAAAACTTCACTTTTAAAACTCCAACTACttcaatcaaa
caaaaaagtgCTGTTCTCGAAGAGAAAAATCTGCAAAGATTTCTGACACC
ACACTCCCAGAGTAGAAAGCTAATTAAAGATATTTGTACATCAACTTCAA
AAGCCATGCCTGGCACACCAGCCTATAAGCGGGAGTTCACTAAGAAACGT
GAACAGACTATTAGCGAACTTTTCCAGCTTTTTAACAAGACTGTCTTTGG
AAACCAGTTGCCAAGCGATCTTCAAATAACCTGGAACAAACGTATGACCA
AAACAGCTGGCTTTTGTTATTATTCAAAAGCATTGAATGCTCGTAAATGT
AGAATTGAACTTTCAGACAAAGTTATTGATTCACCTGAAAGAATTAGAGA
CACATTAATCCACGAACTTTGTCATGCTGCAACTTGGCTTATTAATGGTG
TACAGGCTGGTCATGGTCCACAATGGAAAAGCTGGGCTAAGAAAGCTAAT
CATATTCATCCCGACTTGCCAGTGATATCAAGGTGTCACCAATATGAAAT
TCATACAAAGTACACATACAAGTGTAATGAATGTGGCACTGAATTTGGCA
GACACAGTAAATCGATTGATCCTTCTAAACATAGGTGTGGGAAATGTGGG
GGCATTCCAGAACTTTTACAGAATCCTTCAACTTCTTCTGCTCCAAAAAC
ACCGAACGCCTTTTCATTGTNATGTTGCATCGTTGTCTAAATTGGTTAAA
AAACAAACACTTTTCGATTCTGATGAAACTGAGAGTGATGGGGAAGATTC
TGCAGGTAGTCTAAATGATTTTATTGCCAGTGATGATGGTGATGAGGATG
AGTTTTATAGCGCCGAATCTGACGACTCTGCACATTCTAATGCTTCTGCT
CAATCCAATAAAGAAAATGATAAGGTTTTCCTATCCTCTGATGCAATTGC
TATTAGTGATTCGGAAGATGAATTTGAAAACTTCACTTTTAAAACTCCAA
CTACttcaatcaaacaaaaaagtgCTGTTCTCGAAGAGAAAAATCTGCAA
AGATTTCTGACACCACACTCCCAGAGTAGAAAGCTAATTAAAGATATTTG
TACATCAACTTCAAAAGCCATGCCTGGCACACCAGCCTATAAGCGGGAGT
TCACTAAGAAACGTGAACAGACTATTAGCGAACTTTTCCAGCTTTTTAAC
AAGACTGTCTTTGGAAACCAGTTGCCAAGCGATCTTCAAATAACCTGGAA
CAAACGTATGACCAAAACAGCTGGCTTTTGTTATTATTCAAAAGCATTGA
ATGCTCGTAAATGTAGAATTGAACTTTCAGACAAAGTTATTGATTCACCT
GAAAGAATTAGAGACACATTAATCCACGAACTTTGTCATGCTGCAACTTG
GCTTATTAATGGTGTACAGGCTGGTCATGGTCCACAATGGAAAAGCTGGG
CTAAGAAAGCTAATCATATTCATCCCGACTTGCCAGTGATATCAAGGTGT
CACCAATATGAAATTCATACAAAGTACACATACAAGTGTAATGAATGCAG
CACTGAATTTGGTAGACACAGTAAATCGATTGATCCTTCTAAACATAGGT
GTGGGAAATGTGGGGGCATTCCAGAACTTTTACAGAATCCTTCAACTTCT
TCTGCTCCAAAAACACCGAACGCCTTTTCATTGTTTGTCAAAGAGAACTT
TGGTTCTGTCAAGAAATCTAACCCAGGCAAATCTCATCGAGATGTAATGA
GACTTATTTCTGACAAATTTCAAGagtcaaagaaaaaatgaaatgttatg
aatattatatataaatattatgttttgttttttttgtagtGTAGTAGCCT
TCttgttttgttgacatttaATTCTTACCATTTTGGTTATACGATTGCCA
AAGGAGTACACTTTAAAAAGTTGGCTGTTTATGtctttttacaatatttt
aagATGCCCCAAAAAGAG Run BLAST on NCBI transcript from alignment at sc0000527:84500..97422+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025207 ID=TCONS_00025207|Name=TCONS_00025207|organism=Clytia hemisphaerica|type=transcript|length=12923bp|location=Sequence derived from alignment at sc0000527:84500..97422+ (Clytia hemisphaerica)
TACAGTGTTTATATTGGAAATATCTGGTaaggatttttctttattttgtt
aatGGTTTTCGGGTATTAGACTGTTAGATAGAGCCAAGTTACCAGTGGCA
ATGCACCTcagaatgggccattccagtttttattcgttACCCCCCAACCC
CCtatggacgacatggaatttccgtagcaaattgctttcaagaaagtccg
gaatttccgtaacaaatttacaaaatacctatcaaaaccgtggaattccg
ttactgtaacctaaaaatatcatggaattccaatactttaatgcaaaatt
aagtaaaattcatggaattccaatactttctctttaaagtttgcctggaa
ttccgtgccaaaatttatttaaaaaattgatgtcatccattggggggtaa
tttttttctttctggaatggcccaatcagtggcagttacatcaatatgcc
ttcttacctgtctttaaaaatataaataaaagcaatcacggaaaaggact
cgaaaaaaaaagacataagtgtgagaacagagtaatcaaactcgttagaa
aaagtaccattagaagtcataaaagaTCAActtgaataaatgcaatcgaa
attccagagaacttcataattccccaaacaacattacattaccgtgagag
gtcctaaagccgacagcccagcctaaagccgatggggtctttcaaagata
caaactaaaataaaaacaaacctttcactgtgacgcaacgaagNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgagagatttgatacat
tgaaccaattgaaccaaataacaataattgcttcttataacaaaacatat
ttttttattgcaatatgcacaacgtcataaacgtcaacagtagtaacagc
atcataaaaagtaacgagatgttttgattttccaaagcacacgaaaatat
aaaagagatCTGTGTAcaagcgtgctcattttgaaacgttacgtaatcaa
gcctggtttctattactttacactggcacttggcttgattgcggggctAG
GACTTTGTGTAAGGATACATATAGACGACGTATATTACATTATATTATAT
ATCACATGATAAGACTacaaatagacgacgtatattacaattattatgta
ttacatgacaccttgctcctattctagtaaggataatatatgtcgtcaaa
gagtacacttaaatgaagagctgtccgattgcggaccttccgtaaataaa
catccggacttataggtggtaaagagggcgttgatagttgccgcctcatt
gattcgatgtttgttattcaaattagtgctaccGCATCNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNttgaaagtttgtctcggcctttttataatgagcg
agacatacattctctgattacgcaattttcatattgacattttcgaggca
ttttgatgtaactgagtGGCAGTGCACGAGAACAGCCCCAGTGCACAAAT
AGGCCATGGTCACCAGTGCCACgaaaacgtttcactttttttcaaaatgt
ccatgACTAAGCTTTTAGAAttggttttggtcaatttgagggCGGTGCCC
TGatctgataacttttgatctagaaaagttgagactttgatataatacat
tttttttgatcagtttgaagagctctatcacatGGTATTagaggtctttt
ttgattttgaagaccgtggggggggggtcacaaatgttcagggcttacaa
ttttgcctataaaaagcaaaaaatcgcaaattaacGCAAAAGCTGCAGTT
TTTCAAGCTTGGTACCGTGAAgttagtctggagatccatactctctattc
aaacttacaacacataagcaaaaatcccatcaaaAGCTACTCATTgtcat
tgagagtatggtatttatgatccagtttgaatttgtttacattttggttt
gaattttgtgccaaaaaagccgttgataagcGATATataaggttagccaa
tcagattcgcgcacttccaatcaaaacaatgatatcACATggtttcaaca
attgtttaacagccaatagaattctgcggacagatttggcatctacaaat
aGACACGGCCACTGTGTTATTTCTATCAAGATTTCTACacattattattc
gttttaactaaatgctatacttcgaaaccacacaagcagagtagacgggt
ctcccagctaccGTGAAGTTGGCTAACTTGCATCAATGGAGGGAAACTTA
CATAGCCCTCAAACAGTCAGGGataacttcaaattagcctatcatctcGG
AATATCACCTAATTAGCCTAGAATAAGCAAATTAGCCCACTTCATATAGG
CTAATTAGCtcataatgaagaaaaattagatttttgagccaaatacTAAT
AGTCGCATTCTATATATTCTCAGATTAATCTCTAATCACTCAATTAATGT
ATATTCCAAATATCATCCCTTAAAATCAGCTCCAGAATAGGAGATATTCC
AGAATAGgagatatttgattttttctatcTGCACATGCGCGGACATGCGC
AGTATAAAAACTTTGACATTTTTTCGcggaaaatattattttattttttt
tgcacacGTTACTAAGACCAGAAAATTAGCCTGTTATCAGTTATTTAGCC
CATCAACTAgcttttttaaaatatatacaTCTTTTCTTGGAGCTGAACAC
AAAATTTTTAAGTGGAGTTTTAATTacacggttatcaaaatggcagaatt
tttatacacgcttatcgaaattgttctgaaacgggcggtaagcgttaagc
aagGTTGACGGGTGACAGCTTTTgcggtaagcgtgcaattgcacgcttta
aaatttcttatatttttgacacgcaattccttccgaaagctctgttgaat
ttcaaaagcctagggcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaccat
gccttcgcccgaattagagaattctgaaccccttgaaatccctaagcaat
ttcaaccggggcaggagcgggcgtaaattataaccatgtaattgcgcgct
tacgccctcggaacataagcgtgcaattgagaggatttcccagactgtct
ttgaacttgaaaaaatcaaccaaaaacaAAATTCTATAGAATTTCCTTTG
TGCATcagaatcctcaaactatcCCTTGCAATCTGTCCAAAAATAACAAT
TAGAATTCTCATAACTCCAATCCAGATCTTATAGTTATAGAGGTACCCAT
CATAAAGATAgactttttgaagaaatatgACAATTATTGCTTGTTTCCGA
TTCAATAgccagaaaaaaaaagagataacATTCCAAtgctttttccaaaa
ataaacagaaatcaacacacttttttttataagaatagtgtactttggat
gagggtcaagtattcttaagaaattgtcaaaattgagggtgaaatattct
taacatattcttacttttttagacttgacttttttacaaacatgagaaaa
gATAAATTTGAGAGTGTTGGACTTTTGAttgaacatttgggttaaaatcc
tcaaagcttcaattaatctctaacaaaggaagcagttttttctgttaacc
aaacacaaaatgactgtattcttatcaaattctgtgaaattcaccctaga
gggtattcttagggtattcttacgatttggccaattttcNttctgtgaaa
ttcaccctagagggtattcttagggtattcttacacCCTgatcttataga
agatattgttacaagaaaaaaagCGTGTGATGGATGATggtaatgggcca
ttccagagaatttttgttaccccttgtgcggacgacgtgcattttttttc
tagcctcggaaataatttttttcggtggtcggaaattccaatgaaaatcc
TTGTGTATTTGCAAAATGtgtcggaaattccactctattttgtctttttt
ataatGAGGAGATTCACGAAAAcgcctgggtggaaaatttttgaaaaaga
ggctAATACAATTGTATTAGGGCAAAAgaaggaactttcaaaaaattttt
cccaaaatttaaaaagggaGGGTTGGAGTGTGTAGGAATATAATGTCTTG
AAAAATAATTAGCACGCAGCAGGGGGGAGGGGGCACGACTTTATTATAGT
CAATAGTATTGACTGGTTTGATTGTGAGTCAGTCATGGGTCAGGGGTTTG
TGTCTAAATGCAATTttctgaattaaaaaaaacgtccTATCCTCAATCCC
CCCTCCACAAAACCTTTTTCTAGGGAGGTCATTCAACTATGAGATTCGAT
CAGTTGTGCTTGATTGTGTTTGAGACAACTTAGAGACACCTAAGTTACCA
AGTGCATCCTGTGACATATACGCAAATTGACCTTTTGTCCCGCTGAACGC
CTGCATCCTCTGTTTATCCTgcattttcaaatattcattAGAATAACGCT
AAAAAAGTCACGCAAAAATGGTAAAACACAGCCAAGAACGTAACAAGGAA
GATGATTGATTAAtgataaaaaagcaaaaaattagACAGGGTTTTTGTAA
TCTTCCCATCaactcattttttaaatttttctaaggGGGCTCCCGGCTCT
CTGCCCCAAAAACCCCATTAGAAATGCCTAGCTCAATTTTGCACTCTTTT
TGCGCGCACACCTTGTCCTGTTTTGAAACTTGGCAACTATGagataattt
atcatgtttttattggctgagggaaagtaatgtatgtggagtaattagtt
attcaaaagactgttgCCTTCACCAAAACATCTATTGAGCTGGCAACTTC
CTTACCTGGCAGCCAATctagaaattttctttcaaaatgccAATAATCAA
AATGATCAGGCTAATTGTCAACATCTGAAGTTTGGATAACAGAAACCTGC
CTTCGGTGTGCCCACAGATTTTGCAGTTGAGTTCTGTAACCAAACACCCT
CATTTTTGGGTATTTGATGGTAGTTGACAGGAGGACCCTCTCGGCGCTAT
GGAAACGTCCGGAGCAAAAAGTGCCATTTTTCTCGTGCTCCGGAACACCG
GAAGATTCCGGGGCACAATTGTCACTCCCCAAACGATTCGAAGTACAAAA
AAGTCCGATCGGTAAAAAGACCGATCTTCTTTGGCCTCTACTCGAGCGGT
CTTTTTACCTTTTGGGCCGCTTGGATATTGAAGAAGGCCGATGCGAGGCT
TATTAAAAGCAGCCACAGTGAAGCAGCCACATAGTAAGTTTTAAGCCGCT
AACAGCGGCCCTTAGCAGCTATTAGCGGCCCTTAGCAGCTATTAGCGGCC
ATGAGCGGCCCTTagctttgttttttaatttacttacattttcaagtaca
tttggaacaaagaaagattttttcagaaatcaaaaagggcaaaacaaaaa
aaaaagataaaagggagGGCGCTCAAAATAAAGAAGGGCCTAAGAAACCA
TCAAAtgttgtaaaataaaataaaatgattgctTCCCCAGTAGAGAAGGG
GGAAAGCTTCCAAAAGGGCATCTTGCAGGCTTTGCTTTCTTATAAGCTCC
TGATTTGTCACAAGCTCCTGATCTGTGACGTTTCGAATGCTTGATGCAAC
TTTTAAAATGCgagagagagaaaaagtgaaaatcacgAGAAAAGAAAGCA
CGCAGAGGGagctcaatgtaaacaaacatttagttagtaaaagtctgcaC
TCTGCTTTGTTCgttgttatgatttgaaaagaaatgtaagAGAGCAAAGT
ATTTCGCTATTCAAAAATACTAGATAAACAAGTTCAGAATCTGTAAgtag
ttaaaagaacaattttcaagacaaccctgtctcaccacgaacaatccttt
gttatatCCCCGTCCAAGTCAGTGGAATTCTCTATTATTATTCTAGACAG
TGTAAAATTCTTTATAGCCAAAATTCAGTAAAACTTTAACCGAATTCCAC
AAGCTTAAGCCGAATTCAATAATTACTTTTACCGAATTAGTTAAACTTTT
TACCGAAGCGATTTGGTTAAACAGCCGAATTTATCCGAAACCATTTTACC
GAAACTcggttatatttttgagaagaaccctaagatataagcgaaaaagg
attaattaatcgaatacaaggattaaataatcgaatatggGAGATTaaaa
ataatcgaatataggagaATAAATAGTCGAATCATTAATCAAACTTCATA
AATGAAAATCGATTATatctttgagaagatccctaaagaAAGCCGCTAAA
TAGGACGCTGGCCGCTAAATAGGCCGCTGGCTGCTTGGCCGGTCTCTCGA
TCAAGAAAAAGCCTCTAATAGAGGTCTTGAGGCCGTTCTTGGAAAAATTC
CACTGGCCGCTTCATGGCCGATCTTCTAAAATGTTAGGTCGCTTGAAAAT
CACTTCCCCCGCTATGAGACCGGTCTTTTACCCGCTTTAGCCGATTGGAC
TTttgtgtacttcaaatcgcttggggagtcacaattTTCGGCGATTGGTC
TGGAATAACTGCACACAcgcatgttttcaaaaaatcagccaactTGTGGT
ATATATTTTCGATATTTCGTCCAATGCCTTGGATTATAGCTAATAATGTG
AcgaattcaatttcattaacgGTTGAACCATCATCCTTAAAGACTGAAAG
TATTTTATTTGACCAAAGTCCATCACCTGGagacaaatttctttttgtaa
ccATGTTTAAACGGTTTTTTAAAACGTGATAAAACAGGATAAAAGTCACT
TGCTCCCGATGAAGCACTGTTAGAGCTCCGGAACTTTCCTGagagaaaaa
tagttttttttagcTGCTCCGGAAAACTCCTGAAGTTTCCGTAGCGCCAA
GAGGGTCCTTTGACAGGTCATTGAACAAATACTTTTCTTTCTTGACAATG
CTTTACAATAATAGAAAATTGGCCTCCTTTTAGATCTTAGAACAATCAAA
CGTAGTTGAAAGACAATTGATTTGTGAGTGACCCTTAATTTTTCCTTGGG
CAGCAatgacatgctctgaaaactgGACCCTTTGATCATGCCACCAAGCC
AGTTGTCAAAGTTTTTTTGTCTTAGCACAAGCTTAGCAGAAGAAGATTTG
AGggtaaaatagatttttgggGTTTCCAATGGGGGTTCTCTCAATCAGGT
TCGCTAATCTCTCTGGGATTATCAAACAAATCTTTCAACaattatttaaa
atattttacttttttaatcacaatgtatagcaatgtgccctcccagTTAT
TACcataatcgtcagccgtgcaaaattactcgaatctgattggtttagag
gagtgcgattaatcgttaattgcactattaccactttttgcactcttcgg
cNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagaac
aaagaaattttacgttacaatagcttcttttaattgaaaacaaagaaaaa
ttacactgcaatgttttctttttaaacaaaagaaaaaaaggaggttttcg
aatgtttactgacgattacctcggaatcgtatgtttttacgattactagt
actaatggctttatggcaattcctgaacttgggcacaggatgtacggtta
cacattttgtggattgcGTTGTGGAGTacttttttaatcattaatTTAAT
CATCTTTCTCATTTCATTGGttgtattttgtcatttttgtgcAACTTTGA
GCGTAATTCTATATATaatgaatatttgaaaatgcAGGACACACAGAGGA
TGCGGCCGTACAGCTAGACTGAAGGTACATAGTAAGTAACACTATGGATC
TCCTAGACTTTTGTAGAGATGAGAGAGCTAAGTAATTGGACTTTGATTAT
TAGTTTAGTGAGTTTAGATTTCAGCCAATCTTGTGTAGTTTGTCAGGCTC
ATATACTTGCGAGTATCAGCAAGTGATGTATTGTATGTCAGATGGAAGAC
TTTTGAAGAGTTTTGGGCCCTGTACAGCTAGGCTCTCACAAATAAATTTG
TGAAATACTAATTTGTAATCTCTAGCAGGTGGCTGCTCTTGAACTCTGCT
CTGGAGAGTTTGGAAAAGGGGGATACCTTCGGTTGGgactaaattttccc
caaaactgatTATGGGTCAGCCAAATATGTGAACGCCAAACTTAATTGAA
AAATGTCTCAATCTAATCTACTCCCCTCCAAACAGATGAACGAATTTGGA
AATTGAATGTTTATTTAACAATAGTTAAATCGTAGTTTAATTTTAAATCG
TCTAAATCACTTATTCCGCCTGCGGTACTACCGGGGCGTCCCGCCTGCTG
CAAGTAGCCTTACTTCTCACTTGGTTCCGTGCAATATTGGCTATACTCTC
AAAGAACAAACAAGGTTTAAGATGGCGGTGTTCAAGTCTCAGAAattttt
tacctccctcccGCCTTACAGATATTGGTTGCCGGCAACCCTATTTCTAG
TTTATGTTAGTTTGTCATTAGCAGGGgactaaattttccccaaaactgat
TATGGGTCAGCCAAATATGTGAACGCCAAACTTAATTGAAAAATGTCTCA
ATCTATTCTACTCCCCTCCAAACAGATGaacgaatttggaaattaaatAA
GACATTTTGTAATCTCTAGCAGGTGGCTGCTCTTGAACTCTGCTCTGGAG
AGTTTGGAAAAGCAAATGTAATTTTATTCTAATTTATTAAGAATTTGTTG
CTCCTATATTTTCAGAACAGATAATTTGATACTCCTTCCTACATTTTTTT
GAAGTCCTTGAAAAATAGCTGGTGGCAGTGGATTTTactccaaaattttg
aaaattcaggaGTAATATACCCATAGAAAGTCTTTGAAATGTCTTATTAT
TGACAACAACTGATTACTatctgatagagcttgaacagtAGAACAGTTGG
GATCATCTGTTCGATTTGATAATTTAGaacattttctatattttattTTA
GGTATAAAGATGAACTCTGAATTACGCTTAGAAGTTGGTtgtttggttga
aaaatttgcaACCAGTCTTGGATTTGGAGATGTTGAAACGATGAAGCAAA
CAGCACACCAATTTAAAGCGTTTGCTAATTCTAGCGATAGAGATGAAAGT
GATGTATCAATTGTACCTCCTAGTCAAGATGATGTTGTTGGCCCAGCACG
AAAATCACTTTGCTCAACAGCTTTGTTTATGTCTGATGAAGAAGATGATA
TTCCTTCAATGCCACGacgaaaatcaagaaaaagtagaaaatcaGTTTGT
GTTTTGCCAAAGATGGTTGTTTCTTCCTCTGAGGAAGATGATGATGAGGC
TGAAAAAGGAGATCAAGAAGTTGTTGTTGAAGAGAGTGATGATGAGATTA
TTATCAGCAAACGAAAACAAACACGTAAAGTTTGTATAAGTTCTGATGAT
GAGGACAGTGGTGATGGTGAAGTTCAAGTATTTATTGAACAGCCAGATGG
AACCAAAAAGAAAGTACAAAGCTTTCTTGATGAGAGTGCAGAAGACGATC
CTAACGATAAGGATGTTGCATCGTTGTCTAAATTGGTTAAAAAACAAACA
CTTTTCGATTCTGATGAAACTGAGAGTGATGGGGAAGATTCTGCAGGTAG
TCTAAATGATTTTATTGCCAGTGATGATGGTGATGAGGATGAGTTTTATA
GCGCCGAATCTGACGACTCTGCACATTCTAATGCTTCTGCTCAATCCAAT
AAAGAAAATGATAAGGTTTTCCTATCCTCTGATGCAATTGCTATTAGTGA
TTCGGAAGATGAATTTGAAAACTTCACTTTTAAAACTCCAACTACttcaa
tcaaacaaaaaagtgCTGTTCTCGAAGAGAAAAATCTGCAAAGATTTCTG
ACACCACACTCCCAGAGTAGAAAGCTAATTAAAGATATTTGTACATCAAC
TTCAAAAGCCATGCCTGGCACACCAGCCTATAAGCGGGAGTTCACTAAGA
AACGTGAACAGACTATTAGCGAACTTTTCCAGCTTTTTAACAAGACTGTC
TTTGGAAACCAGTTGCCAAGCGATCTTCAAATAACCTGGAACAAACGTAT
GACCAAAACAGCTGGCTTTTGTTATTATTCAAAAGCATTGAATGCTCGTA
AATGTAGAATTGAACTTTCAGACAAAGTTATTGATTCACCTGAAAGAATT
AGAGACACATTAATCCACGAACTTTGTCATGCTGCAACTTGGCTTATTAA
TGGTGTACAGGCTGGTCATGGTCCACAATGGAAAAGCTGGGCTAAGAAAG
CTAATCATATTCATCCCGACTTGCCAGTGATATCAAGGTGTCACCAATAT
GAAATTCATACAAAGTACACATACAAGTGTAATGAATGTGGCACTGAATT
TGGCAGACACAGTAAATCGATTGATCCTTCTAAACATAGGTGTGGGAAAT
GTGGGGGCATTCCAGAACTTTTACAGAATCCTTCAACTTCTTCTGCTCCA
AAAACACCGAACGCCTTTTCATTGTNATGTTGCATCGTTGTCTAAATTGG
TTAAAAAACAAACACTTTTCGATTCTGATGAAACTGAGAGTGATGGGGAA
GATTCTGCAGGTAGTCTAAATGATTTTATTGCCAGTGATGATGGTGATGA
GGATGAGTTTTATAGCGCCGAATCTGACGACTCTGCACATTCTAATGCTT
CTGCTCAATCCAATAAAGAAAATGATAAGGTTTTCCTATCCTCTGATGCA
ATTGCTATTAGTGATTCGGAAGATGAATTTGAAAACTTCACTTTTAAAAC
TCCAACTACttcaatcaaacaaaaaagtgCTGTTCTCGAAGAGAAAAATC
TGCAAAGATTTCTGACACCACACTCCCAGAGTAGAAAGCTAATTAAAGAT
ATTTGTACATCAACTTCAAAAGCCATGCCTGGCACACCAGCCTATAAGCG
GGAGTTCACTAAGAAACGTGAACAGACTATTAGCGAACTTTTCCAGCTTT
TTAACAAGACTGTCTTTGGAAACCAGTTGCCAAGCGATCTTCAAATAACC
TGGAACAAACGTATGACCAAAACAGCTGGCTTTTGTTATTATTCAAAAGC
ATTGAATGCTCGTAAATGTAGAATTGAACTTTCAGACAAAGTTATTGATT
CACCTGAAAGAATTAGAGACACATTAATCCACGAACTTTGTCATGCTGCA
ACTTGGCTTATTAATGGTGTACAGGCTGGTCATGGTCCACAATGGAAAAG
CTGGGCTAAGAAAGCTAATCATATTCATCCCGACTTGCCAGTGATATCAA
GGTGTCACCAATATGAAATTCATACAAAGTACACATACAAGTGTAATGAA
TGCAGCACTGAATTTGGTAGACACAGTAAATCGATTGATCCTTCTAAACA
TAGGTGTGGGAAATGTGGGGGCATTCCAGAACTTTTACAGAATCCTTCAA
CTTCTTCTGCTCCAAAAACACCGAACGCCTTTTCATTGTTTGTCAAAGAG
AACTTTGGTTCTGTCAAGAAATCTAACCCAGGCAAATCTCATCGAGATGT
AATGAGACTTATTTCTGACAAATTTCAAGagtcaaagaaaaaatgaaatg
ttatgaatattatatataaatattatgttttgttttttttgtagtGTAGT
AGCCTTCttgttttgttgacatttaATTCTTACCATTTTGGTTATACGAT
TGCCAAAGGAGTACACTTTAAAAAGTTGGCTGTTTATGtctttttacaat
attttaagATGCCCCAAAAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025207-exon-sc0000527-1491911889:84500..84525 | TCONS_00025207-exon-sc0000527-1491911889:84500..84525 | Clytia hemisphaerica | exon |
| TCONS_00025207-exon-sc0000527-1510915933:84500..84525 | TCONS_00025207-exon-sc0000527-1510915933:84500..84525 | Clytia hemisphaerica | exon |
| TCONS_00025207-exon-sc0000527-1575043694:84500..84525 | TCONS_00025207-exon-sc0000527-1575043694:84500..84525 | Clytia hemisphaerica | exon |
| TCONS_00025207-exon-sc0000527-1491911889:94681..97422 | TCONS_00025207-exon-sc0000527-1491911889:94681..97422 | Clytia hemisphaerica | exon |
| TCONS_00025207-exon-sc0000527-1510915933:94681..97422 | TCONS_00025207-exon-sc0000527-1510915933:94681..97422 | Clytia hemisphaerica | exon |
| TCONS_00025207-exon-sc0000527-1575043694:94681..97422 | TCONS_00025207-exon-sc0000527-1575043694:94681..97422 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000527 | supercontig | sc0000527:84500..97422 + |
Blast
BLAST of TCONS_00025207 vs. Swiss-Prot (Human)
Match: ACRC (Acidic repeat-containing protein OS=Homo sapiens GN=GCNA PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.196e-42 Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 2
Query: 980 REFTKKREQTISELFQLFNKTVFGNQLPSDLQITWNKRMTKTAGFC-----YYSKALNARKCRIELSDKVIDSPERIRDTLIHELCHAATWLINGVQAGHGPQWKSWAKKANHIHPDLPVISRCHQYEIHTKYTYKCNECGTEFGRHSKSIDPSKHRCGKCGG 1453
+ + +++ + ++ LFN++V +LP L+I WN +M KTAG C +Y K R +I++ KV DS +RIRDTLIHE+CHAA+WLI+G+ HG WK +A+K+N IHP+LP ++RCH Y+I+ K Y+C C T G ++KS+D S+ C KC G
Sbjct: 512 KNLKRNKDELVQRIYDLFNRSVCDKKLPEKLRIGWNNKMVKTAGLCSTGEMWYPKW--RRFAKIQIGLKVCDSADRIRDTLIHEMCHAASWLIDGIHDSHGDAWKYYARKSNRIHPELPRVTRCHNYKINYKVHYECTGCKTRIGCYTKSLDTSRFICAKCKG 672 HSP 2 Score: 162.54 bits (410), Expect = 2.172e-41 Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 3
Query: 1944 REFTKKREQTISELFQLFNKTVFGNQLPSDLQITWNKRMTKTAGFC-----YYSKALNARKCRIELSDKVIDSPERIRDTLIHELCHAATWLINGVQAGHGPQWKSWAKKANHIHPDLPVISRCHQYEIHTKYTYKCNECSTEFGRHSKSIDPSKHRCGKCGG 2417
+ + +++ + ++ LFN++V +LP L+I WN +M KTAG C +Y K R +I++ KV DS +RIRDTLIHE+CHAA+WLI+G+ HG WK +A+K+N IHP+LP ++RCH Y+I+ K Y+C C T G ++KS+D S+ C KC G
Sbjct: 512 KNLKRNKDELVQRIYDLFNRSVCDKKLPEKLRIGWNNKMVKTAGLCSTGEMWYPKWR--RFAKIQIGLKVCDSADRIRDTLIHEMCHAASWLIDGIHDSHGDAWKYYARKSNRIHPELPRVTRCHNYKINYKVHYECTGCKTRIGCYTKSLDTSRFICAKCKG 672
The following BLAST results are available for this feature:
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