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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025206 ID=TCONS_00025206|Name=TCONS_00025206|organism=Clytia hemisphaerica|type=transcript|length=2833bp
TTTCTCTACCCTTCCATAACCTTTTTTACTTATCGTACAGTGTTTATATT
GGAAATATCTGGTATAAAGATGAACTCTGAATTACGCTTAGAAGTTGGTt
gtttggttgaaaaatttgcaACCAGTCTTGGATTTGGAGATGTTGAAACG
ATGAAGCAAACAGCACACCAATTTAAAGCGTTTGCTAATTCTAGCGATAG
AGATGAAAGTGATGTATCAATTGTACCTCCTAGTCAAGATGATGTTGTTG
GCCCAGCACGAAAATCACTTTGCTCAACAGCTTTGTTTATGTCTGATGAA
GAAGATGATATTCCTTCAATGCCACGacgaaaatcaagaaaaagtagaaa
atcaGTTTGTGTTTTGCCAAAGATGGTTGTTTCTTCCTCTGAGGAAGATG
ATGATGAGGCTGAAAAAGGAGATCAAGAAGTTGTTGTTGAAGAGAGTGAT
GATGAGATTATTATCAGCAAACGAAAACAAACACGTAAAGTTTGTATAAG
TTCTGATGATGAGGACAGTGGTGATGGTGAAGTTCAAGTATTTATTGAAC
AGCCAGATGGAACCAAAAAGAAAGTACAAAGCTTTCTTGATGAGAGTGCA
GAAGACGATCCTAACGATAAGGATGTTGCATCGTTGTCTAAATTGGTTAA
AAAACAAACACTTTTCGATTCTGATGAAACTGAGAGTGATGGGGAAGATT
CTGCAGGTAGTCTAAATGATTTTATTGCCAGTGATGATGGTGATGAGGAT
GAGTTTTATAGCGCCGAATCTGACGACTCTGCACATTCTAATGCTTCTGC
TCAATCCAATAAAGAAAATGATAAGGTTTTCCTATCCTCTGATGCAATTG
CTATTAGTGATTCGGAAGATGAATTTGAAAACTTCACTTTTAAAACTCCA
ACTACttcaatcaaacaaaaaagtgCTGTTCTCGAAGAGAAAAATCTGCA
AAGATTTCTGACACCACACTCCCAGAGTAGAAAGCTAATTAAAGATATTT
GTACATCAACTTCAAAAGCCATGCCTGGCACACCAGCCTATAAGCGGGAG
TTCACTAAGAAACGTGAACAGACTATTAGCGAACTTTTCCAGCTTTTTAA
CAAGACTGTCTTTGGAAACCAGTTGCCAAGCGATCTTCAAATAACCTGGA
ACAAACGTATGACCAAAACAGCTGGCTTTTGTTATTATTCAAAAGCATTG
AATGCTCGTAAATGTAGAATTGAACTTTCAGACAAAGTTATTGATTCACC
TGAAAGAATTAGAGACACATTAATCCACGAACTTTGTCATGCTGCAACTT
GGCTTATTAATGGTGTACAGGCTGGTCATGGTCCACAATGGAAAAGCTGG
GCTAAGAAAGCTAATCATATTCATCCCGACTTGCCAGTGATATCAAGGTG
TCACCAATATGAAATTCATACAAAGTACACATACAAGTGTAATGAATGTG
GCACTGAATTTGGCAGACACAGTAAATCGATTGATCCTTCTAAACATAGG
TGTGGGAAATGTGGGGGCATTCCAGAACTTTTACAGAATCCTTCAACTTC
TTCTGCTCCAAAAACACCGAACGCCTTTTCATTGTNATGTTGCATCGTTG
TCTAAATTGGTTAAAAAACAAACACTTTTCGATTCTGATGAAACTGAGAG
TGATGGGGAAGATTCTGCAGGTAGTCTAAATGATTTTATTGCCAGTGATG
ATGGTGATGAGGATGAGTTTTATAGCGCCGAATCTGACGACTCTGCACAT
TCTAATGCTTCTGCTCAATCCAATAAAGAAAATGATAAGGTTTTCCTATC
CTCTGATGCAATTGCTATTAGTGATTCGGAAGATGAATTTGAAAACTTCA
CTTTTAAAACTCCAACTACttcaatcaaacaaaaaagtgCTGTTCTCGAA
GAGAAAAATCTGCAAAGATTTCTGACACCACACTCCCAGAGTAGAAAGCT
AATTAAAGATATTTGTACATCAACTTCAAAAGCCATGCCTGGCACACCAG
CCTATAAGCGGGAGTTCACTAAGAAACGTGAACAGACTATTAGCGAACTT
TTCCAGCTTTTTAACAAGACTGTCTTTGGAAACCAGTTGCCAAGCGATCT
TCAAATAACCTGGAACAAACGTATGACCAAAACAGCTGGCTTTTGTTATT
ATTCAAAAGCATTGAATGCTCGTAAATGTAGAATTGAACTTTCAGACAAA
GTTATTGATTCACCTGAAAGAATTAGAGACACATTAATCCACGAACTTTG
TCATGCTGCAACTTGGCTTATTAATGGTGTACAGGCTGGTCATGGTCCAC
AATGGAAAAGCTGGGCTAAGAAAGCTAATCATATTCATCCCGACTTGCCA
GTGATATCAAGGTGTCACCAATATGAAATTCATACAAAGTACACATACAA
GTGTAATGAATGCAGCACTGAATTTGGTAGACACAGTAAATCGATTGATC
CTTCTAAACATAGGTGTGGGAAATGTGGGGGCATTCCAGAACTTTTACAG
AATCCTTCAACTTCTTCTGCTCCAAAAACACCGAACGCCTTTTCATTGTT
TGTCAAAGAGAACTTTGGTTCTGTCAAGAAATCTAACCCAGGCAAATCTC
ATCGAGATGTAATGAGACTTATTTCTGACAAATTTCAAGagtcaaagaaa
aaatgaaatgttatgaatattatatataaatattatgttttgtttttttt
gtagtGTAGTAGCCTTCttgttttgttgacatttaATTCTTACCATTTTG
GTTATACGATTGCCAAAGGAGTACACTTTAAAAAGTTGGCTGTTTATGtc
tttttacaatattttaagATGCCCCAAAAAGAG Run BLAST on NCBI protein sequence of TCONS_00025206-protein >TCONS_00025206-protein ID=TCONS_00025206-protein|Name=TCONS_00025206-protein|organism=Clytia hemisphaerica|type=polypeptide|length=534bp
FLYPSITFFTYRTVFILEISGIKMNSELRLEVGCLVEKFATSLGFGDVET
MKQTAHQFKAFANSSDRDESDVSIVPPSQDDVVGPARKSLCSTALFMSDE
EDDIPSMPRRKSRKSRKSVCVLPKMVVSSSEEDDDEAEKGDQEVVVEESD
DEIIISKRKQTRKVCISSDDEDSGDGEVQVFIEQPDGTKKKVQSFLDESA
EDDPNDKDVASLSKLVKKQTLFDSDETESDGEDSAGSLNDFIASDDGDED
EFYSAESDDSAHSNASAQSNKENDKVFLSSDAIAISDSEDEFENFTFKTP
TTSIKQKSAVLEEKNLQRFLTPHSQSRKLIKDICTSTSKAMPGTPAYKRE
FTKKREQTISELFQLFNKTVFGNQLPSDLQITWNKRMTKTAGFCYYSKAL
NARKCRIELSDKVIDSPERIRDTLIHELCHAATWLINGVQAGHGPQWKSW
AKKANHIHPDLPVISRCHQYEIHTKYTYKCNECGTEFGRHSKSIDPSKHR
CGKCGGIPELLQNPSTSSAPKTPNAFSLXCCIVV Run BLAST on NCBI transcript from alignment at sc0000527:84465..97422+ Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025206 ID=TCONS_00025206|Name=TCONS_00025206|organism=Clytia hemisphaerica|type=transcript|length=12958bp|location=Sequence derived from alignment at sc0000527:84465..97422+ (Clytia hemisphaerica)
TTTCTCTACCCTTCCATAACCTTTTTTACTTATCGTACAGTGTTTATATT
GGAAATATCTGGTaaggatttttctttattttgttaatGGTTTTCGGGTA
TTAGACTGTTAGATAGAGCCAAGTTACCAGTGGCAATGCACCTcagaatg
ggccattccagtttttattcgttACCCCCCAACCCCCtatggacgacatg
gaatttccgtagcaaattgctttcaagaaagtccggaatttccgtaacaa
atttacaaaatacctatcaaaaccgtggaattccgttactgtaacctaaa
aatatcatggaattccaatactttaatgcaaaattaagtaaaattcatgg
aattccaatactttctctttaaagtttgcctggaattccgtgccaaaatt
tatttaaaaaattgatgtcatccattggggggtaatttttttctttctgg
aatggcccaatcagtggcagttacatcaatatgccttcttacctgtcttt
aaaaatataaataaaagcaatcacggaaaaggactcgaaaaaaaaagaca
taagtgtgagaacagagtaatcaaactcgttagaaaaagtaccattagaa
gtcataaaagaTCAActtgaataaatgcaatcgaaattccagagaacttc
ataattccccaaacaacattacattaccgtgagaggtcctaaagccgaca
gcccagcctaaagccgatggggtctttcaaagatacaaactaaaataaaa
acaaacctttcactgtgacgcaacgaagNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNtgagagatttgatacattgaaccaattgaacc
aaataacaataattgcttcttataacaaaacatatttttttattgcaata
tgcacaacgtcataaacgtcaacagtagtaacagcatcataaaaagtaac
gagatgttttgattttccaaagcacacgaaaatataaaagagatCTGTGT
Acaagcgtgctcattttgaaacgttacgtaatcaagcctggtttctatta
ctttacactggcacttggcttgattgcggggctAGGACTTTGTGTAAGGA
TACATATAGACGACGTATATTACATTATATTATATATCACATGATAAGAC
Tacaaatagacgacgtatattacaattattatgtattacatgacaccttg
ctcctattctagtaaggataatatatgtcgtcaaagagtacacttaaatg
aagagctgtccgattgcggaccttccgtaaataaacatccggacttatag
gtggtaaagagggcgttgatagttgccgcctcattgattcgatgtttgtt
attcaaattagtgctaccGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nttgaaagtttgtctcggcctttttataatgagcgagacatacattctct
gattacgcaattttcatattgacattttcgaggcattttgatgtaactga
gtGGCAGTGCACGAGAACAGCCCCAGTGCACAAATAGGCCATGGTCACCA
GTGCCACgaaaacgtttcactttttttcaaaatgtccatgACTAAGCTTT
TAGAAttggttttggtcaatttgagggCGGTGCCCTGatctgataacttt
tgatctagaaaagttgagactttgatataatacattttttttgatcagtt
tgaagagctctatcacatGGTATTagaggtcttttttgattttgaagacc
gtggggggggggtcacaaatgttcagggcttacaattttgcctataaaaa
gcaaaaaatcgcaaattaacGCAAAAGCTGCAGTTTTTCAAGCTTGGTAC
CGTGAAgttagtctggagatccatactctctattcaaacttacaacacat
aagcaaaaatcccatcaaaAGCTACTCATTgtcattgagagtatggtatt
tatgatccagtttgaatttgtttacattttggtttgaattttgtgccaaa
aaagccgttgataagcGATATataaggttagccaatcagattcgcgcact
tccaatcaaaacaatgatatcACATggtttcaacaattgtttaacagcca
atagaattctgcggacagatttggcatctacaaataGACACGGCCACTGT
GTTATTTCTATCAAGATTTCTACacattattattcgttttaactaaatgc
tatacttcgaaaccacacaagcagagtagacgggtctcccagctaccGTG
AAGTTGGCTAACTTGCATCAATGGAGGGAAACTTACATAGCCCTCAAACA
GTCAGGGataacttcaaattagcctatcatctcGGAATATCACCTAATTA
GCCTAGAATAAGCAAATTAGCCCACTTCATATAGGCTAATTAGCtcataa
tgaagaaaaattagatttttgagccaaatacTAATAGTCGCATTCTATAT
ATTCTCAGATTAATCTCTAATCACTCAATTAATGTATATTCCAAATATCA
TCCCTTAAAATCAGCTCCAGAATAGGAGATATTCCAGAATAGgagatatt
tgattttttctatcTGCACATGCGCGGACATGCGCAGTATAAAAACTTTG
ACATTTTTTCGcggaaaatattattttattttttttgcacacGTTACTAA
GACCAGAAAATTAGCCTGTTATCAGTTATTTAGCCCATCAACTAgctttt
ttaaaatatatacaTCTTTTCTTGGAGCTGAACACAAAATTTTTAAGTGG
AGTTTTAATTacacggttatcaaaatggcagaatttttatacacgcttat
cgaaattgttctgaaacgggcggtaagcgttaagcaagGTTGACGGGTGA
CAGCTTTTgcggtaagcgtgcaattgcacgctttaaaatttcttatattt
ttgacacgcaattccttccgaaagctctgttgaatttcaaaagcctaggg
caNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaccatgccttcgcccgaatt
agagaattctgaaccccttgaaatccctaagcaatttcaaccggggcagg
agcgggcgtaaattataaccatgtaattgcgcgcttacgccctcggaaca
taagcgtgcaattgagaggatttcccagactgtctttgaacttgaaaaaa
tcaaccaaaaacaAAATTCTATAGAATTTCCTTTGTGCATcagaatcctc
aaactatcCCTTGCAATCTGTCCAAAAATAACAATTAGAATTCTCATAAC
TCCAATCCAGATCTTATAGTTATAGAGGTACCCATCATAAAGATAgactt
tttgaagaaatatgACAATTATTGCTTGTTTCCGATTCAATAgccagaaa
aaaaaagagataacATTCCAAtgctttttccaaaaataaacagaaatcaa
cacacttttttttataagaatagtgtactttggatgagggtcaagtattc
ttaagaaattgtcaaaattgagggtgaaatattcttaacatattcttact
tttttagacttgacttttttacaaacatgagaaaagATAAATTTGAGAGT
GTTGGACTTTTGAttgaacatttgggttaaaatcctcaaagcttcaatta
atctctaacaaaggaagcagttttttctgttaaccaaacacaaaatgact
gtattcttatcaaattctgtgaaattcaccctagagggtattcttagggt
attcttacgatttggccaattttcNttctgtgaaattcaccctagagggt
attcttagggtattcttacacCCTgatcttatagaagatattgttacaag
aaaaaaagCGTGTGATGGATGATggtaatgggccattccagagaattttt
gttaccccttgtgcggacgacgtgcattttttttctagcctcggaaataa
tttttttcggtggtcggaaattccaatgaaaatccTTGTGTATTTGCAAA
ATGtgtcggaaattccactctattttgtcttttttataatGAGGAGATTC
ACGAAAAcgcctgggtggaaaatttttgaaaaagaggctAATACAATTGT
ATTAGGGCAAAAgaaggaactttcaaaaaatttttcccaaaatttaaaaa
gggaGGGTTGGAGTGTGTAGGAATATAATGTCTTGAAAAATAATTAGCAC
GCAGCAGGGGGGAGGGGGCACGACTTTATTATAGTCAATAGTATTGACTG
GTTTGATTGTGAGTCAGTCATGGGTCAGGGGTTTGTGTCTAAATGCAATT
ttctgaattaaaaaaaacgtccTATCCTCAATCCCCCCTCCACAAAACCT
TTTTCTAGGGAGGTCATTCAACTATGAGATTCGATCAGTTGTGCTTGATT
GTGTTTGAGACAACTTAGAGACACCTAAGTTACCAAGTGCATCCTGTGAC
ATATACGCAAATTGACCTTTTGTCCCGCTGAACGCCTGCATCCTCTGTTT
ATCCTgcattttcaaatattcattAGAATAACGCTAAAAAAGTCACGCAA
AAATGGTAAAACACAGCCAAGAACGTAACAAGGAAGATGATTGATTAAtg
ataaaaaagcaaaaaattagACAGGGTTTTTGTAATCTTCCCATCaactc
attttttaaatttttctaaggGGGCTCCCGGCTCTCTGCCCCAAAAACCC
CATTAGAAATGCCTAGCTCAATTTTGCACTCTTTTTGCGCGCACACCTTG
TCCTGTTTTGAAACTTGGCAACTATGagataatttatcatgtttttattg
gctgagggaaagtaatgtatgtggagtaattagttattcaaaagactgtt
gCCTTCACCAAAACATCTATTGAGCTGGCAACTTCCTTACCTGGCAGCCA
ATctagaaattttctttcaaaatgccAATAATCAAAATGATCAGGCTAAT
TGTCAACATCTGAAGTTTGGATAACAGAAACCTGCCTTCGGTGTGCCCAC
AGATTTTGCAGTTGAGTTCTGTAACCAAACACCCTCATTTTTGGGTATTT
GATGGTAGTTGACAGGAGGACCCTCTCGGCGCTATGGAAACGTCCGGAGC
AAAAAGTGCCATTTTTCTCGTGCTCCGGAACACCGGAAGATTCCGGGGCA
CAATTGTCACTCCCCAAACGATTCGAAGTACAAAAAAGTCCGATCGGTAA
AAAGACCGATCTTCTTTGGCCTCTACTCGAGCGGTCTTTTTACCTTTTGG
GCCGCTTGGATATTGAAGAAGGCCGATGCGAGGCTTATTAAAAGCAGCCA
CAGTGAAGCAGCCACATAGTAAGTTTTAAGCCGCTAACAGCGGCCCTTAG
CAGCTATTAGCGGCCCTTAGCAGCTATTAGCGGCCATGAGCGGCCCTTag
ctttgttttttaatttacttacattttcaagtacatttggaacaaagaaa
gattttttcagaaatcaaaaagggcaaaacaaaaaaaaaagataaaaggg
agGGCGCTCAAAATAAAGAAGGGCCTAAGAAACCATCAAAtgttgtaaaa
taaaataaaatgattgctTCCCCAGTAGAGAAGGGGGAAAGCTTCCAAAA
GGGCATCTTGCAGGCTTTGCTTTCTTATAAGCTCCTGATTTGTCACAAGC
TCCTGATCTGTGACGTTTCGAATGCTTGATGCAACTTTTAAAATGCgaga
gagagaaaaagtgaaaatcacgAGAAAAGAAAGCACGCAGAGGGagctca
atgtaaacaaacatttagttagtaaaagtctgcaCTCTGCTTTGTTCgtt
gttatgatttgaaaagaaatgtaagAGAGCAAAGTATTTCGCTATTCAAA
AATACTAGATAAACAAGTTCAGAATCTGTAAgtagttaaaagaacaattt
tcaagacaaccctgtctcaccacgaacaatcctttgttatatCCCCGTCC
AAGTCAGTGGAATTCTCTATTATTATTCTAGACAGTGTAAAATTCTTTAT
AGCCAAAATTCAGTAAAACTTTAACCGAATTCCACAAGCTTAAGCCGAAT
TCAATAATTACTTTTACCGAATTAGTTAAACTTTTTACCGAAGCGATTTG
GTTAAACAGCCGAATTTATCCGAAACCATTTTACCGAAACTcggttatat
ttttgagaagaaccctaagatataagcgaaaaaggattaattaatcgaat
acaaggattaaataatcgaatatggGAGATTaaaaataatcgaatatagg
agaATAAATAGTCGAATCATTAATCAAACTTCATAAATGAAAATCGATTA
TatctttgagaagatccctaaagaAAGCCGCTAAATAGGACGCTGGCCGC
TAAATAGGCCGCTGGCTGCTTGGCCGGTCTCTCGATCAAGAAAAAGCCTC
TAATAGAGGTCTTGAGGCCGTTCTTGGAAAAATTCCACTGGCCGCTTCAT
GGCCGATCTTCTAAAATGTTAGGTCGCTTGAAAATCACTTCCCCCGCTAT
GAGACCGGTCTTTTACCCGCTTTAGCCGATTGGACTTttgtgtacttcaa
atcgcttggggagtcacaattTTCGGCGATTGGTCTGGAATAACTGCACA
CAcgcatgttttcaaaaaatcagccaactTGTGGTATATATTTTCGATAT
TTCGTCCAATGCCTTGGATTATAGCTAATAATGTGAcgaattcaatttca
ttaacgGTTGAACCATCATCCTTAAAGACTGAAAGTATTTTATTTGACCA
AAGTCCATCACCTGGagacaaatttctttttgtaaccATGTTTAAACGGT
TTTTTAAAACGTGATAAAACAGGATAAAAGTCACTTGCTCCCGATGAAGC
ACTGTTAGAGCTCCGGAACTTTCCTGagagaaaaatagttttttttagcT
GCTCCGGAAAACTCCTGAAGTTTCCGTAGCGCCAAGAGGGTCCTTTGACA
GGTCATTGAACAAATACTTTTCTTTCTTGACAATGCTTTACAATAATAGA
AAATTGGCCTCCTTTTAGATCTTAGAACAATCAAACGTAGTTGAAAGACA
ATTGATTTGTGAGTGACCCTTAATTTTTCCTTGGGCAGCAatgacatgct
ctgaaaactgGACCCTTTGATCATGCCACCAAGCCAGTTGTCAAAGTTTT
TTTGTCTTAGCACAAGCTTAGCAGAAGAAGATTTGAGggtaaaatagatt
tttgggGTTTCCAATGGGGGTTCTCTCAATCAGGTTCGCTAATCTCTCTG
GGATTATCAAACAAATCTTTCAACaattatttaaaatattttactttttt
aatcacaatgtatagcaatgtgccctcccagTTATTACcataatcgtcag
ccgtgcaaaattactcgaatctgattggtttagaggagtgcgattaatcg
ttaattgcactattaccactttttgcactcttcggcNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagaacaaagaaattttacgt
tacaatagcttcttttaattgaaaacaaagaaaaattacactgcaatgtt
ttctttttaaacaaaagaaaaaaaggaggttttcgaatgtttactgacga
ttacctcggaatcgtatgtttttacgattactagtactaatggctttatg
gcaattcctgaacttgggcacaggatgtacggttacacattttgtggatt
gcGTTGTGGAGTacttttttaatcattaatTTAATCATCTTTCTCATTTC
ATTGGttgtattttgtcatttttgtgcAACTTTGAGCGTAATTCTATATA
TaatgaatatttgaaaatgcAGGACACACAGAGGATGCGGCCGTACAGCT
AGACTGAAGGTACATAGTAAGTAACACTATGGATCTCCTAGACTTTTGTA
GAGATGAGAGAGCTAAGTAATTGGACTTTGATTATTAGTTTAGTGAGTTT
AGATTTCAGCCAATCTTGTGTAGTTTGTCAGGCTCATATACTTGCGAGTA
TCAGCAAGTGATGTATTGTATGTCAGATGGAAGACTTTTGAAGAGTTTTG
GGCCCTGTACAGCTAGGCTCTCACAAATAAATTTGTGAAATACTAATTTG
TAATCTCTAGCAGGTGGCTGCTCTTGAACTCTGCTCTGGAGAGTTTGGAA
AAGGGGGATACCTTCGGTTGGgactaaattttccccaaaactgatTATGG
GTCAGCCAAATATGTGAACGCCAAACTTAATTGAAAAATGTCTCAATCTA
ATCTACTCCCCTCCAAACAGATGAACGAATTTGGAAATTGAATGTTTATT
TAACAATAGTTAAATCGTAGTTTAATTTTAAATCGTCTAAATCACTTATT
CCGCCTGCGGTACTACCGGGGCGTCCCGCCTGCTGCAAGTAGCCTTACTT
CTCACTTGGTTCCGTGCAATATTGGCTATACTCTCAAAGAACAAACAAGG
TTTAAGATGGCGGTGTTCAAGTCTCAGAAattttttacctccctcccGCC
TTACAGATATTGGTTGCCGGCAACCCTATTTCTAGTTTATGTTAGTTTGT
CATTAGCAGGGgactaaattttccccaaaactgatTATGGGTCAGCCAAA
TATGTGAACGCCAAACTTAATTGAAAAATGTCTCAATCTATTCTACTCCC
CTCCAAACAGATGaacgaatttggaaattaaatAAGACATTTTGTAATCT
CTAGCAGGTGGCTGCTCTTGAACTCTGCTCTGGAGAGTTTGGAAAAGCAA
ATGTAATTTTATTCTAATTTATTAAGAATTTGTTGCTCCTATATTTTCAG
AACAGATAATTTGATACTCCTTCCTACATTTTTTTGAAGTCCTTGAAAAA
TAGCTGGTGGCAGTGGATTTTactccaaaattttgaaaattcaggaGTAA
TATACCCATAGAAAGTCTTTGAAATGTCTTATTATTGACAACAACTGATT
ACTatctgatagagcttgaacagtAGAACAGTTGGGATCATCTGTTCGAT
TTGATAATTTAGaacattttctatattttattTTAGGTATAAAGATGAAC
TCTGAATTACGCTTAGAAGTTGGTtgtttggttgaaaaatttgcaACCAG
TCTTGGATTTGGAGATGTTGAAACGATGAAGCAAACAGCACACCAATTTA
AAGCGTTTGCTAATTCTAGCGATAGAGATGAAAGTGATGTATCAATTGTA
CCTCCTAGTCAAGATGATGTTGTTGGCCCAGCACGAAAATCACTTTGCTC
AACAGCTTTGTTTATGTCTGATGAAGAAGATGATATTCCTTCAATGCCAC
GacgaaaatcaagaaaaagtagaaaatcaGTTTGTGTTTTGCCAAAGATG
GTTGTTTCTTCCTCTGAGGAAGATGATGATGAGGCTGAAAAAGGAGATCA
AGAAGTTGTTGTTGAAGAGAGTGATGATGAGATTATTATCAGCAAACGAA
AACAAACACGTAAAGTTTGTATAAGTTCTGATGATGAGGACAGTGGTGAT
GGTGAAGTTCAAGTATTTATTGAACAGCCAGATGGAACCAAAAAGAAAGT
ACAAAGCTTTCTTGATGAGAGTGCAGAAGACGATCCTAACGATAAGGATG
TTGCATCGTTGTCTAAATTGGTTAAAAAACAAACACTTTTCGATTCTGAT
GAAACTGAGAGTGATGGGGAAGATTCTGCAGGTAGTCTAAATGATTTTAT
TGCCAGTGATGATGGTGATGAGGATGAGTTTTATAGCGCCGAATCTGACG
ACTCTGCACATTCTAATGCTTCTGCTCAATCCAATAAAGAAAATGATAAG
GTTTTCCTATCCTCTGATGCAATTGCTATTAGTGATTCGGAAGATGAATT
TGAAAACTTCACTTTTAAAACTCCAACTACttcaatcaaacaaaaaagtg
CTGTTCTCGAAGAGAAAAATCTGCAAAGATTTCTGACACCACACTCCCAG
AGTAGAAAGCTAATTAAAGATATTTGTACATCAACTTCAAAAGCCATGCC
TGGCACACCAGCCTATAAGCGGGAGTTCACTAAGAAACGTGAACAGACTA
TTAGCGAACTTTTCCAGCTTTTTAACAAGACTGTCTTTGGAAACCAGTTG
CCAAGCGATCTTCAAATAACCTGGAACAAACGTATGACCAAAACAGCTGG
CTTTTGTTATTATTCAAAAGCATTGAATGCTCGTAAATGTAGAATTGAAC
TTTCAGACAAAGTTATTGATTCACCTGAAAGAATTAGAGACACATTAATC
CACGAACTTTGTCATGCTGCAACTTGGCTTATTAATGGTGTACAGGCTGG
TCATGGTCCACAATGGAAAAGCTGGGCTAAGAAAGCTAATCATATTCATC
CCGACTTGCCAGTGATATCAAGGTGTCACCAATATGAAATTCATACAAAG
TACACATACAAGTGTAATGAATGTGGCACTGAATTTGGCAGACACAGTAA
ATCGATTGATCCTTCTAAACATAGGTGTGGGAAATGTGGGGGCATTCCAG
AACTTTTACAGAATCCTTCAACTTCTTCTGCTCCAAAAACACCGAACGCC
TTTTCATTGTNATGTTGCATCGTTGTCTAAATTGGTTAAAAAACAAACAC
TTTTCGATTCTGATGAAACTGAGAGTGATGGGGAAGATTCTGCAGGTAGT
CTAAATGATTTTATTGCCAGTGATGATGGTGATGAGGATGAGTTTTATAG
CGCCGAATCTGACGACTCTGCACATTCTAATGCTTCTGCTCAATCCAATA
AAGAAAATGATAAGGTTTTCCTATCCTCTGATGCAATTGCTATTAGTGAT
TCGGAAGATGAATTTGAAAACTTCACTTTTAAAACTCCAACTACttcaat
caaacaaaaaagtgCTGTTCTCGAAGAGAAAAATCTGCAAAGATTTCTGA
CACCACACTCCCAGAGTAGAAAGCTAATTAAAGATATTTGTACATCAACT
TCAAAAGCCATGCCTGGCACACCAGCCTATAAGCGGGAGTTCACTAAGAA
ACGTGAACAGACTATTAGCGAACTTTTCCAGCTTTTTAACAAGACTGTCT
TTGGAAACCAGTTGCCAAGCGATCTTCAAATAACCTGGAACAAACGTATG
ACCAAAACAGCTGGCTTTTGTTATTATTCAAAAGCATTGAATGCTCGTAA
ATGTAGAATTGAACTTTCAGACAAAGTTATTGATTCACCTGAAAGAATTA
GAGACACATTAATCCACGAACTTTGTCATGCTGCAACTTGGCTTATTAAT
GGTGTACAGGCTGGTCATGGTCCACAATGGAAAAGCTGGGCTAAGAAAGC
TAATCATATTCATCCCGACTTGCCAGTGATATCAAGGTGTCACCAATATG
AAATTCATACAAAGTACACATACAAGTGTAATGAATGCAGCACTGAATTT
GGTAGACACAGTAAATCGATTGATCCTTCTAAACATAGGTGTGGGAAATG
TGGGGGCATTCCAGAACTTTTACAGAATCCTTCAACTTCTTCTGCTCCAA
AAACACCGAACGCCTTTTCATTGTTTGTCAAAGAGAACTTTGGTTCTGTC
AAGAAATCTAACCCAGGCAAATCTCATCGAGATGTAATGAGACTTATTTC
TGACAAATTTCAAGagtcaaagaaaaaatgaaatgttatgaatattatat
ataaatattatgttttgttttttttgtagtGTAGTAGCCTTCttgttttg
ttgacatttaATTCTTACCATTTTGGTTATACGATTGCCAAAGGAGTACA
CTTTAAAAAGTTGGCTGTTTATGtctttttacaatattttaagATGCCCC
AAAAAGAG Coding sequence (CDS) from alignment at sc0000527:84465..97422+ >TCONS_00025206 ID=TCONS_00025206|Name=TCONS_00025206|organism=Clytia hemisphaerica|type=CDS|length=3210bp|location=Sequence derived from alignment at sc0000527:84465..97422+ (Clytia hemisphaerica)
TTTCTCTACCCTTCCATAACCTTTTTTACTTATCGTACAGTGTTTATATT
GGAAATATCTGGTATAAAGATGAACTCTGAATTACGCTTAGAAGTTGGTt
gtttggttgaaaaatttgcaACCAGTCTTGGATTTGGAGATGTTGAAACG
ATGAAGCAAACAGCACACCAATTTAAAGCGTTTGCTAATTCTAGCGATAG
AGATGAAAGTGATGTATCAATTGTACCTCCTAGTCAAGATGATGTTGTTG
GCCCAGCACGAAAATCACTTTGCTCAACAGCTTTGTTTATGTCTGATGAA
GAAGATGATATTCCTTCAATGCCACGacgaaaatcaagaaaaagtagaaa
atcaGTTTGTGTTTTGCCAAAGATGGTTGTTTCTTCCTCTGAGGAAGATG
ATGATGAGGCTGAAAAAGGAGATCAAGAAGTTGTTGTTGAAGAGAGTGAT
GATGAGATTATTATCAGCAAACGAAAACAAACACGTAAAGTTTGTATAAG
TTCTGATGATGAGGACAGTGGTGATGGTGAAGTTCAAGTATTTATTGAAC
AGCCAGATGGAACCAAAAAGAAAGTACAAAGCTTTCTTGATGAGAGTGCA
GAAGACGATCCTAACGATAAGGATGTTGCATCGTTGTCTAAATTGGTTAA
AAAACAAACACTTTTCGATTCTGATGAAACTGAGAGTGATGGGGAAGATT
CTGCAGGTAGTCTAAATGATTTTATTGCCAGTGATGATGGTGATGAGGAT
GAGTTTTATAGCGCCGAATCTGACGACTCTGCACATTCTAATGCTTCTGC
TCAATCCAATAAAGAAAATGATAAGGTTTTCCTATCCTCTGATGCAATTG
CTATTAGTGATTCGGAAGATGAATTTGAAAACTTCACTTTTAAAACTCCA
ACTACttcaatcaaacaaaaaagtgCTGTTCTCGAAGAGAAAAATCTGCA
AAGATTTCTGACACCACACTCCCAGAGTAGAAAGCTAATTAAAGATATTT
GTACATCAACTTCAAAAGCCATGCCTGGCACACCAGCCTATAAGCGGGAG
TTCACTAAGAAACGTGAACAGACTATTAGCGAACTTTTCCAGCTTTTTAA
CAAGACTGTCTTTGGAAACCAGTTGCCAAGCGATCTTCAAATAACCTGGA
ACAAACGTATGACCAAAACAGCTGGCTTTTGTTATTATTCAAAAGCATTG
AATGCTCGTAAATGTAGAATTGAACTTTCAGACAAAGTTATTGATTCACC
TGAAAGAATTAGAGACACATTAATCCACGAACTTTGTCATGCTGCAACTT
GGCTTATTAATGGTGTACAGGCTGGTCATGGTCCACAATGGAAAAGCTGG
GCTAAGAAAGCTAATCATATTCATCCCGACTTGCCAGTGATATCAAGGTG
TCACCAATATGAAATTCATACAAAGTACACATACAAGTGTAATGAATGTG
GCACTGAATTTGGCAGACACAGTAAATCGATTGATCCTTCTAAACATAGG
TGTGGGAAATGTGGGGGCATTCCAGAACTTTTACAGAATCCTTCAACTTC
TTCTGCTCCAAAAACACCGAACGCCTTTTCATTGTNATGTTGCATCGTTG
TCTAATTTCTCTACCCTTCCATAACCTTTTTTACTTATCGTACAGTGTTT
ATATTGGAAATATCTGGTATAAAGATGAACTCTGAATTACGCTTAGAAGT
TGGTtgtttggttgaaaaatttgcaACCAGTCTTGGATTTGGAGATGTTG
AAACGATGAAGCAAACAGCACACCAATTTAAAGCGTTTGCTAATTCTAGC
GATAGAGATGAAAGTGATGTATCAATTGTACCTCCTAGTCAAGATGATGT
TGTTGGCCCAGCACGAAAATCACTTTGCTCAACAGCTTTGTTTATGTCTG
ATGAAGAAGATGATATTCCTTCAATGCCACGacgaaaatcaagaaaaagt
agaaaatcaGTTTGTGTTTTGCCAAAGATGGTTGTTTCTTCCTCTGAGGA
AGATGATGATGAGGCTGAAAAAGGAGATCAAGAAGTTGTTGTTGAAGAGA
GTGATGATGAGATTATTATCAGCAAACGAAAACAAACACGTAAAGTTTGT
ATAAGTTCTGATGATGAGGACAGTGGTGATGGTGAAGTTCAAGTATTTAT
TGAACAGCCAGATGGAACCAAAAAGAAAGTACAAAGCTTTCTTGATGAGA
GTGCAGAAGACGATCCTAACGATAAGGATGTTGCATCGTTGTCTAAATTG
GTTAAAAAACAAACACTTTTCGATTCTGATGAAACTGAGAGTGATGGGGA
AGATTCTGCAGGTAGTCTAAATGATTTTATTGCCAGTGATGATGGTGATG
AGGATGAGTTTTATAGCGCCGAATCTGACGACTCTGCACATTCTAATGCT
TCTGCTCAATCCAATAAAGAAAATGATAAGGTTTTCCTATCCTCTGATGC
AATTGCTATTAGTGATTCGGAAGATGAATTTGAAAACTTCACTTTTAAAA
CTCCAACTACttcaatcaaacaaaaaagtgCTGTTCTCGAAGAGAAAAAT
CTGCAAAGATTTCTGACACCACACTCCCAGAGTAGAAAGCTAATTAAAGA
TATTTGTACATCAACTTCAAAAGCCATGCCTGGCACACCAGCCTATAAGC
GGGAGTTCACTAAGAAACGTGAACAGACTATTAGCGAACTTTTCCAGCTT
TTTAACAAGACTGTCTTTGGAAACCAGTTGCCAAGCGATCTTCAAATAAC
CTGGAACAAACGTATGACCAAAACAGCTGGCTTTTGTTATTATTCAAAAG
CATTGAATGCTCGTAAATGTAGAATTGAACTTTCAGACAAAGTTATTGAT
TCACCTGAAAGAATTAGAGACACATTAATCCACGAACTTTGTCATGCTGC
AACTTGGCTTATTAATGGTGTACAGGCTGGTCATGGTCCACAATGGAAAA
GCTGGGCTAAGAAAGCTAATCATATTCATCCCGACTTGCCAGTGATATCA
AGGTGTCACCAATATGAAATTCATACAAAGTACACATACAAGTGTAATGA
ATGTGGCACTGAATTTGGCAGACACAGTAAATCGATTGATCCTTCTAAAC
ATAGGTGTGGGAAATGTGGGGGCATTCCAGAACTTTTACAGAATCCTTCA
ACTTCTTCTGCTCCAAAAACACCGAACGCCTTTTCATTGTNATGTTGCAT
CGTTGTCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025206-exon-sc0000527-1491911889:84465..84525 | TCONS_00025206-exon-sc0000527-1491911889:84465..84525 | Clytia hemisphaerica | exon |
| TCONS_00025206-exon-sc0000527-1510915933:84465..84525 | TCONS_00025206-exon-sc0000527-1510915933:84465..84525 | Clytia hemisphaerica | exon |
| TCONS_00025206-exon-sc0000527-1575043694:84465..84525 | TCONS_00025206-exon-sc0000527-1575043694:84465..84525 | Clytia hemisphaerica | exon |
| TCONS_00025206-exon-sc0000527-1491911889:94651..97422 | TCONS_00025206-exon-sc0000527-1491911889:94651..97422 | Clytia hemisphaerica | exon |
| TCONS_00025206-exon-sc0000527-1510915933:94651..97422 | TCONS_00025206-exon-sc0000527-1510915933:94651..97422 | Clytia hemisphaerica | exon |
| TCONS_00025206-exon-sc0000527-1575043694:94651..97422 | TCONS_00025206-exon-sc0000527-1575043694:94651..97422 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000527 | supercontig | sc0000527:84465..97422 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR006640 | SprT-like_domain |
Blast
BLAST of TCONS_00025206 vs. Swiss-Prot (Human)
Match: ACRC (Acidic repeat-containing protein OS=Homo sapiens GN=GCNA PE=1 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.764e-42 Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 1
Query: 1045 REFTKKREQTISELFQLFNKTVFGNQLPSDLQITWNKRMTKTAGFC-----YYSKALNARKCRIELSDKVIDSPERIRDTLIHELCHAATWLINGVQAGHGPQWKSWAKKANHIHPDLPVISRCHQYEIHTKYTYKCNECGTEFGRHSKSIDPSKHRCGKCGG 1518
+ + +++ + ++ LFN++V +LP L+I WN +M KTAG C +Y K R +I++ KV DS +RIRDTLIHE+CHAA+WLI+G+ HG WK +A+K+N IHP+LP ++RCH Y+I+ K Y+C C T G ++KS+D S+ C KC G
Sbjct: 512 KNLKRNKDELVQRIYDLFNRSVCDKKLPEKLRIGWNNKMVKTAGLCSTGEMWYPKW--RRFAKIQIGLKVCDSADRIRDTLIHEMCHAASWLIDGIHDSHGDAWKYYARKSNRIHPELPRVTRCHNYKINYKVHYECTGCKTRIGCYTKSLDTSRFICAKCKG 672 HSP 2 Score: 162.54 bits (410), Expect = 2.316e-41 Identity = 72/163 (44.17%), Postives = 107/163 (65.64%), Query Frame = 2
Query: 2009 REFTKKREQTISELFQLFNKTVFGNQLPSDLQITWNKRMTKTAGFC-----YYSKALNARKCRIELSDKVIDSPERIRDTLIHELCHAATWLINGVQAGHGPQWKSWAKKANHIHPDLPVISRCHQYEIHTKYTYKCNECSTEFGRHSKSIDPSKHRCGKCGG 2482
+ + +++ + ++ LFN++V +LP L+I WN +M KTAG C +Y K R +I++ KV DS +RIRDTLIHE+CHAA+WLI+G+ HG WK +A+K+N IHP+LP ++RCH Y+I+ K Y+C C T G ++KS+D S+ C KC G
Sbjct: 512 KNLKRNKDELVQRIYDLFNRSVCDKKLPEKLRIGWNNKMVKTAGLCSTGEMWYPKWR--RFAKIQIGLKVCDSADRIRDTLIHEMCHAASWLIDGIHDSHGDAWKYYARKSNRIHPELPRVTRCHNYKINYKVHYECTGCKTRIGCYTKSLDTSRFICAKCKG 672
The following BLAST results are available for this feature:
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