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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025201 ID=TCONS_00025201|Name=TCONS_00025201|organism=Clytia hemisphaerica|type=transcript|length=1219bp
AAACGGTTTAAATTCACTACATTAAGGATTAGTGAATAAGTTTCCAGAAG
ATTGTCACCAAAGTGGTATGAAatcacttttctgtttccccttatggtca
agaacttttcatcgtccccgaacgggaaatagaatttttataaaacaaag
cagatttttgtttccggATCGAGAAAAGGTTTCCAAAtagggaagttttt
aattgggaatCTGGAAATTCGAATTAAGAAGTGATAacccggtggatttc
ttaaTTACCTGGTGAATGTTATTTATTTTCCCTCCTTTACAAGAGGGACA
AGATTAAAACTTTCCACAGGCATTTCCGGAGTGCTCAGAGGCcactttcc
cgatcgggaaactggTGAACTTCCCGATTTGGAAAGTCTAGTCATTTCGG
GAAGTTTTACGCCTTaccgttcgggaaatatttcctgttaaggcaatagt
tgccttttCCATGTAGTGGTCCCGACTGTTCGCCGCTTTAACgtaatttt
gtttgtttaccgttcgttattttgtttttgttcgcTCAGGCATTTTCTAG
TCTAATTACGGGTTCATGTCCATTTCTAGAGAGTACAGCGCGAAGCATTC
AAATACTTTAACAAGCTGATCGAAGAGCATTGCACCCGACATAATTTTGA
TCTGAAATCATTTATCGAGAATACGAAAATTTGCTACAAGaacaacaaaa
gaagaaaaagaacagTAATGAAGAACAAATTTCATTAAATAAAAACGATC
CTGAGTCAGTTTCACAGGATCTTGACCTTTCGGATAATATTCTAGAAGAC
AGTACAATTGATGAAACTCAAAATTAAAATGTGACTCCAAAAAGTCTTTC
TGAAGGTGAAATCGTCGTGAAATTGGAAAACAAGCctgatgaagaaaaaa
ccaTGTGTTCAAGCTAAAGATTTTTCATCAACTTCGAGTGTGGAGAACGA
GAAGGCTAAAAATGATACTCTCTCAAACCCTTTAACCAGTAAACAAACTA
CTGCCTGCTACTGCAAGAGGTtatcaaagaaagttttaagAAGTCAAAGA
CCTCTTGAAGGGTCTTGAGACAATGGGAtattacattaaaggaagaaatt
ttggcgaaaagaaaatttggcggatttggccagaatccgccaaattaaac
tttttgaattaatatgatctcttttaaggtgtttttgtattgtttttgct
gtttttacgccattttagg Run BLAST on NCBI transcript from alignment at sc0000527:54819..56037+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025201 ID=TCONS_00025201|Name=TCONS_00025201|organism=Clytia hemisphaerica|type=transcript|length=1219bp|location=Sequence derived from alignment at sc0000527:54819..56037+ (Clytia hemisphaerica)
AAACGGTTTAAATTCACTACATTAAGGATTAGTGAATAAGTTTCCAGAAG
ATTGTCACCAAAGTGGTATGAAatcacttttctgtttccccttatggtca
agaacttttcatcgtccccgaacgggaaatagaatttttataaaacaaag
cagatttttgtttccggATCGAGAAAAGGTTTCCAAAtagggaagttttt
aattgggaatCTGGAAATTCGAATTAAGAAGTGATAacccggtggatttc
ttaaTTACCTGGTGAATGTTATTTATTTTCCCTCCTTTACAAGAGGGACA
AGATTAAAACTTTCCACAGGCATTTCCGGAGTGCTCAGAGGCcactttcc
cgatcgggaaactggTGAACTTCCCGATTTGGAAAGTCTAGTCATTTCGG
GAAGTTTTACGCCTTaccgttcgggaaatatttcctgttaaggcaatagt
tgccttttCCATGTAGTGGTCCCGACTGTTCGCCGCTTTAACgtaatttt
gtttgtttaccgttcgttattttgtttttgttcgcTCAGGCATTTTCTAG
TCTAATTACGGGTTCATGTCCATTTCTAGAGAGTACAGCGCGAAGCATTC
AAATACTTTAACAAGCTGATCGAAGAGCATTGCACCCGACATAATTTTGA
TCTGAAATCATTTATCGAGAATACGAAAATTTGCTACAAGaacaacaaaa
gaagaaaaagaacagTAATGAAGAACAAATTTCATTAAATAAAAACGATC
CTGAGTCAGTTTCACAGGATCTTGACCTTTCGGATAATATTCTAGAAGAC
AGTACAATTGATGAAACTCAAAATTAAAATGTGACTCCAAAAAGTCTTTC
TGAAGGTGAAATCGTCGTGAAATTGGAAAACAAGCctgatgaagaaaaaa
ccaTGTGTTCAAGCTAAAGATTTTTCATCAACTTCGAGTGTGGAGAACGA
GAAGGCTAAAAATGATACTCTCTCAAACCCTTTAACCAGTAAACAAACTA
CTGCCTGCTACTGCAAGAGGTtatcaaagaaagttttaagAAGTCAAAGA
CCTCTTGAAGGGTCTTGAGACAATGGGAtattacattaaaggaagaaatt
ttggcgaaaagaaaatttggcggatttggccagaatccgccaaattaaac
tttttgaattaatatgatctcttttaaggtgtttttgtattgtttttgct
gtttttacgccattttagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025201-exon-sc0000527-1491911889:54819..56037 | TCONS_00025201-exon-sc0000527-1491911889:54819..56037 | Clytia hemisphaerica | exon |
| TCONS_00025201-exon-sc0000527-1510915933:54819..56037 | TCONS_00025201-exon-sc0000527-1510915933:54819..56037 | Clytia hemisphaerica | exon |
| TCONS_00025201-exon-sc0000527-1575043694:54819..56037 | TCONS_00025201-exon-sc0000527-1575043694:54819..56037 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000527 | supercontig | sc0000527:54819..56037 + |
Blast
The following BLAST results are available for this feature:
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