TCONS_00025168 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025168
Unique NameTCONS_00025168
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3024

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025168 ID=TCONS_00025168|Name=TCONS_00025168|organism=Clytia hemisphaerica|type=transcript|length=3024bp
AATAGATTAAACATCGGACGGACAGAATGGAAAATTGCTTTGCTTGCAAA
TCATCACAGATTGACTGCTGTCATCTAAGACACGTTCTTTTTATCATAAT
ATATGGTAATTGAGAGTATTTGAGAAAATGATTAAGGAAGTACTAACTAC
ACGCATATTATCATATTACGTACGATAACAGAAAACTAGACTCATAAATC
GTGCTTACCATGAACAAACAACACCTCTTCCATGGAATTACTATAATATT
GTATGTTTGGTATATCAGTGATGTTACAGCCACAGATTGTGGTCTTGGTA
GAAAACTTACCCAATGTACTGGCTTAACCAAAATTGCACCTGCTTCTAAA
AAAATAAATAACAGAAGAAAACGTTCTTCGTCCCCAATGCGGTCGCAGTC
ATTTAATGAAACATCATCGACGGAAACATGCAAATGTTTAGAGGGGCCGT
CTCACCATCAAGCGTATTACGACTGTGAAAATCAAAATGGCGAATGCGTA
GAATCAAAAGTATACATTTTGAAAGGACGTTGGTGGGATGAGTCGGATAG
TCAAAAGACATACGCATGCCCGTTCGGTTATTGTAACTTGGGTGAAGGCA
GATGTATTGGGAGAAACGATAGTGAAAGTTATTGTCTATTTGATAAGACG
AGTCAATGTTCTAAGGGCCGAGAGGGTCGTCTATGTGGAAAATGCGCACA
AAATTTGAGCGTCGCATTTGGGAGTGAAGACTGTAAACAGTGTAAAGACA
CCAATATACTTATCCTGTTGATTTTCTTCGCCATTTTATCGATCCTAATT
CTAGCGATTATCTATTTCAACGTGAACGCATTTTCAGGATATTTTAACGC
GTTTTTATATTCATATCAAGTAATGGGGGTTTTTATACCCAAATATGTGG
AACTAGACTTGGATCGTGTTTCGTTGTTTTTCATTTACGCGTTGGGGCTA
CAAGGAACTGGTAGTAATCTTGGTGTATGTTTTTACGATGGAATGGATAA
TCTTGATAAAATTGGACTTAATTTCGTCATTCCAGCATACATGATAGTTT
TCACTGCAATAATTGGACGTTTTTTACCGAACCGTGCTTGGCAATTTTTG
CTGACTCATCAAACGGAAGGTTCGGCACCACGACGCGTGTCAATCGGCCG
CGCGTTCAGTTTTGTAGCTGTAATATGTTATTCACTTATCACAACCATTA
CGTTAGACTTAATTGACCGTATCACGATTGATGGGAAGGAGTACGTTTAC
AAAGCAGCGTTTGTTGAATATCTCGGAACACCTAAACATGAAGTACTTTT
CGCTATGGCTATAATTAGTCTTATTCTTTTTGTGCTTGGATTCCCAGCTT
TATTATTCGGTTCATTTTGGTTTGCAAGGATATTTCGAGACTGGATACAA
ATGCACAGGCTAGAACCCGTATTAAATAGCCTCAAGAATTGTTTCAAACC
CAAAATGACTTGGTTTGCTTCATTTTATTTCTTATGTCGATTGACTATTC
TTTTATTCACTGTTTTCATTAATGCAGATATTGTGAGAGCTTTTTGCCTG
GCTATGTCGTGTGGACTATTTCTCTTCATTTTTGCTGTCTGCCAACCGTA
TAAAAGATGGCGGTTTAATTTTTGGGACTTGGTCCAAATGACGAACATGT
TATTTATAAGTATAACCGGACTGTTATTGCAGCATCAATCTTCGATGAGA
CGGAAAATCAGAGATAGATTAATAGTCTTGTTGCGTGTGTTGATTTATGT
ACCGCTGGTGATCGCATTTTCGAGGACTATCTTCTTTTACACTTTGACGA
GAATCAATAGAAGTCCTTGGTGTCGAATGCGGATTTTGAACCGGGTGGAA
TTACGGTACGCAAGTGTCATCGGACATAGCCCAAATAACAATGGGCGAGC
AGGTCATCCTCCTACACCCCAACGTGTGATGGATTCTTTTGAAAGGAGTT
CCTACCAAAACTCACAAGCTTCAATCGCAAGCTCAGGACTTTGAATTTAT
GAGAAGCAAAATCAAAACTGAATACGCATAGACACTAACTTGAGTACTGG
GCGCAAACTTGTTCGTTACTGGATCCTTTACTTTCGTTAAGAGGAGCAAC
TTCAACTTCTGCACCTATATAAACGAAATAATTATCTGTATCTAATCTTT
TGAGAATGGCTGAGTGATTGAGAGTGATTGAAACGATTTGGAGCAAACCG
CAGTTTTGATCTGCAAAAACGAGGCTGGTAAAAGTGCTTGTTAACCGTTG
TCCTCATTTGATCAGGATCTAGGCAAATCTAAAACTAACCTTCCCCATCG
CAGGAAAAGCACccacataaactcgctattgaaTTTTCCAACAGCTTAAA
ATGATTGAAATACACAATGAAGTTAGTGTGAAATAATGTTTATTCTTGTG
CTTTGGATGCCTTGGTCAACTGTTGAACGCTTATATGAGAACGGAATTGA
TATCAAATTTTATGTAAACGTAGACTTGGATAATCGAATTATATCCTCTC
TGTGGCTGTAAATCCATTGATAATCGTATCGTTTGTTGTGTTTGACATCG
TTTAGGAGGATGAGTATACTTTCCTTACTGAACTTTAACTGACTGAAACA
AAATGCTAATGCTGCATGGATGTGTAATTCACGAAATTTGATCTTCTGAA
TTTGATGGTTGTTAGTAGAAAAAATTATTAGACTCATTAAAATAGAAGGT
TTATTAAAGACCATTAAAGTAAAACTTCGACAATTTGAAACTTTGTTTGT
TGACCTAAAGATAGACAATCCACGTTCCTTAGAGGAACCACCCTGCCATT
CAGGTCAAATTGATTTATCCCGgcaaatatggaaatatttaaaataatca
aaaatagcATGTAATTatttaaataatttatttgaatattttaccctgaa
aacattttcccaaatcAAACTAGCAATACAAACTTTGATAAATGCTTTGG
TTTTTTAATCATATTTTACTAAAGAAATAATGGTTTATAGGGTTTACATG
GCTAGATCATGTGACGTTGGAGTT
Run BLAST on NCBI

protein sequence of TCONS_00025168-protein

>TCONS_00025168-protein ID=TCONS_00025168-protein|Name=TCONS_00025168-protein|organism=Clytia hemisphaerica|type=polypeptide|length=594bp
MNKQHLFHGITIILYVWYISDVTATDCGLGRKLTQCTGLTKIAPASKKIN
NRRKRSSSPMRSQSFNETSSTETCKCLEGPSHHQAYYDCENQNGECVESK
VYILKGRWWDESDSQKTYACPFGYCNLGEGRCIGRNDSESYCLFDKTSQC
SKGREGRLCGKCAQNLSVAFGSEDCKQCKDTNILILLIFFAILSILILAI
IYFNVNAFSGYFNAFLYSYQVMGVFIPKYVELDLDRVSLFFIYALGLQGT
GSNLGVCFYDGMDNLDKIGLNFVIPAYMIVFTAIIGRFLPNRAWQFLLTH
QTEGSAPRRVSIGRAFSFVAVICYSLITTITLDLIDRITIDGKEYVYKAA
FVEYLGTPKHEVLFAMAIISLILFVLGFPALLFGSFWFARIFRDWIQMHR
LEPVLNSLKNCFKPKMTWFASFYFLCRLTILLFTVFINADIVRAFCLAMS
CGLFLFIFAVCQPYKRWRFNFWDLVQMTNMLFISITGLLLQHQSSMRRKI
RDRLIVLLRVLIYVPLVIAFSRTIFFYTLTRINRSPWCRMRILNRVELRY
ASVIGHSPNNNGRAGHPPTPQRVMDSFERSSYQNSQASIASSGL
Run BLAST on NCBI

transcript from alignment at sc0000524:58175..64549-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025168 ID=TCONS_00025168|Name=TCONS_00025168|organism=Clytia hemisphaerica|type=transcript|length=6375bp|location=Sequence derived from alignment at sc0000524:58175..64549- (Clytia hemisphaerica)
AATAGATTAAACATCGGACGGACAGAATGGAAAATTGCTTTGCTTGCAAA TCATCACAGATTGACTGCTGTCATCTAAGACACGTTCTTTTTATCATAAT ATATGGTAATTGAGAGTATTTGAGAAAATGATTAAGGAAGTACTAACTAC ACGCATATTATCATATTACGTACGGTAAAGAGACATTGTTGTTGATAGTC TATGTTGTGGAAAAACTTGATGTTATTTTTGGAAAAATGTTTGCGTTTGT TTTACTTTACTCTGGAGAATATTTGATACAATATTCTTGCACCTTGAATC AATTGAAACATGGTGTAGTCAATGTAGCATAATATCGATATGGGAAAGTC TTTTCCTAACTTGAGACCTTTCATTTTGATAGAAAATTATTATATTTAAG ATTTGACATACTGAGAAAAGAGACTAGAATAAACTGAACCTGAGTTCAGA TTGTGGATGTTTTCTGCACACCACGCTGAAGCTCTAAAGGGATGGGTGAA AACAAACAATCTGACGAATATGCAATCTCGAGGACCGCGTTCGCGTAAAA GTACTAGGAATGACAACAAAGTTGCGTGATTGTGTTTATGAATAGGGCGC CGTATCAGTTTTTGACTTTCCGGCGCACAACAAGATTCTTGTTGTAGAAT TTTCCGCGGGAGGACTATTTTCCACAGATGTTTAATTTTCAAGCGCCTTC AGAGGTTTACCGTGCGCGTAAGAAAATTATGAACAGCTGTATCAGGTTAA ATAAACTGAAATGATCGCGTTTTCCACGCTCTTACTAGCTTACTTTATCT TTCTGAGGGATTCGAACCAGGTTTTGACACTTGGGTGCAAAAATACATCT TTTTCGTCACTTCTATTTTACAGATAACAGAAAACTAGACTCATAAATCG TGCTTACCATGAACAAACAACACCTCTTCCATGGAATTACTATAATATTG TATGTTTGGTATATCAGTGATGTTACAGCCACAGATTGTGGTCTTGGTAG AAAACTTACCCAATGTACTGGCTTAACCAAAATTGCACCTGCTTCTAAAA AAATAAATAACAGAAGAAAACGTTCTTCGTCCCCAATGCGGTCGCAGTCA TTTAATGAAACATCATCGACGGAAACATGCAAATGTTTAGAGGGGCCGTC TCACCATCAAGCGTATTACGACTGTGAAAATCAAAATGGCGAATGCGTAG AATCAAAAGTATACATTTTGAAAGGACGTTGGTGGGATGAGTCGGATAGT CAAAAGACATACGCATGCCCGTTCGGTTATTGTAACTTGGGTGAAGGCAG ATGTATTGGGAGAAACGATAGTGAAAGTTATTGTCTATTTGATAAGACGA GTCAATGTTCTAAGGGCCGAGAGGGTCGTCTATGTGGAAAATGCGCACAA AATTTGAGCGTCGCATTTGGGAGTGAAGACTGTAAACAGTGTAAAGACAC CAATATACTTATCCTGTTGATTTTCTTCGCCATTTTATCGATCCTAATTC TAGCGATTATCTATTTCAACGTGAACGCATTTTCAGGATATTTTAACGCG TTTTTATATTCATATCAAGTAATGGGGGTTTTTATACCCAAATATGTGGA ACTAGACTTGGATCGTGTTTCGTTGTTTTTCATTTACGCGTTGGGGCTAC AAGGAACTGGTAGTAATCTTGGTGTATGTTTTTACGATGGAATGGATAAT CTTGATAAAATTGGACTTAATTTCGTCATTCCAGCATACATGATAGTTTT CACTGCAATAATTGGACGTTTTTTACCGAACCGTGCTTGGCAATTTTTGC TGACTCATCAAACGGAAGGTTCGGCACCACGACGCGTGTCAATCGGCCGC GCGTTCAGTTTTGTAGCTGTAATATGTTATTCACTTATCACAACCATTAC GTTAGACTTAATTGACCGTATCACGATTGATGGGAAGGAGTACGTTTACA AAGCAGCGTTTGTTGAATATCTCGGAACACCTAAACATGAAGTACTTTTC GCTATGGCTATAATTAGTCTTATTCTTTTTGTGCTTGGATTCCCAGCTTT ATTATTCGGTTCATTTTGGTTTGCAAGGATATTTCGAGACTGGATACAAA TGCACAGGCTAGAACCCGTATTAAATAGCCTCAAGAATTGTTTCAAACCC AAAATGACTTGGTTTGCTTCATTTTATTTCTTATGTCGATTGACTATTCT TTTATTCACTGTTTTCATTAATGCAGATATTGTGAGAGCTTTTTGCCTGG CTATGTCGTGTGGACTATTTCTCTTCATTTTTGCTGTCTGCCAACCGTAT AAAAGATGGCGGTTTAATTTTTGGGACTTGGTCCAAATGACGAACATGTT ATTTATAAGTATAACCGGACTGTTATTGCAGCATCAATCTTCGATGAGAC GGAAAATCAGAGATAGATTAATAGTCTTGTTGCGTGTGTTGATTTATGTA CCGCTGGTGATCGCATTTTCGAGGACTATCTTCTTTTACACTTTGACGAG AATCAATAGAAGTCCTTGGTGTAAGTTTGAAATTCTTTTAGAGTTGGTAT AAGTGCAAGTTTGAATAACTGGGAGTTTACTGTACATGTTTTTTTCTATT TATGATATGCACCACTGGAGAGTCTTCGGAGAACTTTAAAAAATTTTTTA AACATTTTTAGAGCCTGATATAGGAAAAACTATTTCTTAAACATGTGTAG CGTTTCCAGATAAAGAGAACTTCAGGGTTTATTATCCGACGCGCGTAAAT AGCGACATTTGATTGACTTCTTTGCTGTCCAATATTTTCGAATATACAGG GTGTCCCTAATTAAAGTATCGAGTCGAAACACAACTATGAGTAGAAAGTT TTATGTGCGTGTTCACAAAATTGTATTTTAAGCTCTCCCTCNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNTGTGATGGAGAACGTTCTTATATTTTA GCGATAACACACACAAACTTTTCTACTCAATCGCATGTTCAAACTCGATA CTTTAATTAGGGACACCCTGTACAGCTATCATGGAGGCTACATATTTCAA AAATTGACGTTACACAACAAGTTCAATGACAATTGAGCATCTTCTTTTTG ACGTTACGTCACAAAATAAAAATAAGACTACCAAGAAAGCAAATTTACGA GCTTATAAATTGGAATTATGTTTGAAAACAAGAAATCTTTTAGCGATGAA CGGATAATAAACCATTTATTTGGACGCAGTCGAATCCAATATGAAAAATA TTGGGCTACGAGAAAAGATATTGGACTCGGCGAAGCCTCGTCCAATATTT TTTCTCGCACGCCCAATATTTTTGCATATTGGATTCGATTTGTCCAATAA CTGCTTAATATTGCCATAATTTTTACGAGATCTGATTTTAACAGAATAGT TCACCTAGGACGCCTTTTTGTGCACTAATTTTTTCTTCTGCCATTTTATT CCGTCGAAAAGTCTTTTTGAGAAAAATATACCAAAAATTGATTTTAAGAT GAACAAGAATCCTTATTTCAGCCATAAAATTATTTTTCACATGGAATATT AGTAAAAAAAAGCATTTTTCTACTGCACCGAGCTAACTTTTATAGTCTCA TAATTTCTTATGATTTTCTTAAGCCAATTCTCTTGTTGATCATAAACACC CTCATTATTTTTAAAGGTACAGATATCACAAACTTAAAACATTTTCTTCA TATTTTCAGGTCGAATGCGGATTTTGAACCGGGTGGAATTACGGTACGCA AGTGTCATCGGACATAGCCCAAATAACAGTAAGTAACTAATCCAAATTTT GCATCCTTCTTTTCATCTAGTATAGCATACTCGAGTGACTTAGGGCAAGT CTCAAAAACCTAACAGTTTACCCTAAGTTTTCGCTACCAATAGCAGCCAG ATTCAGAGATCCACTTAGGGCTCTAAAGTANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTCATAAATCGTATAATCGCTATAATATAAAAAA TACATGTCAAATCTATCCCAAATTTGAACCAAAGATGCATGTAACTGAAA TGTAACTTTTTGAAAAAAAATTTGATGACGTCAGCAAAAAATTGCATTTT TGTATTTTTTGTATTTTTTGCTGACGTCATCAAAATCTTCAAAAAAATTT TCATTGAAAAGTTCGGCACCATTAAGTTGCGTCTTTGGTCCAAATTTGAC AAAGATTTGACATGTACTTATAGAGTTAGAGCTAATTTACGATTTATGAC GTCATAATTTGATGACGTCACAATTCACACNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNTTGATGACGTCACAATTCACACTTTCTTTAATAATTAATTT TTAGGTTAATATTTAATTACGTAACACCGGATCCTGAAACTTTAAGGTAT AGGTCATCTAAAAATCCATAAGTGAATCCCTGAGAATGGGTGCTATTGGT CGCGGATTCGGGATTTGTGATTCTTAAAAATCTAGACACGCCCTAACTCA CCCGAGTACTGATCAACTAGATCCAAGAGCAAGAAGGTTATGTCAGTGCA CGAAGTATTTTCGGTATTTGTGATTTTTTGACGAATACCACCCCCCCATG GATACTCTTAAGAATTGGCTTGAATTTTTTATTACCTTGGATATACGGCG CTTTTTATGTTCATGAATGAAAAGCACCGTACACCCAGTGACAGTCAAAA GTTATTTTCTGATATCCTCAAATAGTAGTGTCTGGAAAAAACCAGAGTGT ATTAATCTTAAGTTTGTTGTTTGTTAAAATCGTTCTTTACTCAAAAACAC GAATTTTTATAATTATTTTATTTGTTTCTTTTATCGTGTAGATGGGCGAG CAGGTCATCCTCCTACACCCCAACGTGTGATGGATTCTTTTGAAAGGAGT TCCTACCAAAACTCACAAGCTTCAATCGCAAGCTCAGGACTTTGAATTTA TGAGAAGCAAAATCAAAACTGAATACGCATAGACACTAACTTGAGTACTG GGCGCAAACTTGTTCGTTACTGGATCCTTTACTTTCGTTAAGAGGAGCAA CTTCAACTTCTGCACCTATATAAACGAAATAATTATCTGTATCTAATCTT TTGAGAATGGCTGAGTGATTGAGAGTGATTGAAACGATTTGGAGCAAACC GCAGTTTTGATCTGCAAAAACGAGGCTGGTAAAAGTGCTTGTTAACCGTT GTCCTCATTTGATCAGGATCTAGGCAAATCTAAAACTAACCTTCCCCATC GCAGGAAAAGCACCCACATAAACTCGCTATTGAATTTTCCAACAGCTTAA AATGATTGAAATACACAATGAAGTTAGTGTGAAATAATGTTTATTCTTGT GCTTTGGATGCCTTGGTCAACTGTTGAACGCTTATATGAGAACGGAATTG ATATCAAATTTTATGTAAACGTAGACTTGGATAATCGAATTATATCCTCT CTGTGGCTGTAAATCCATTGATAATCGTATCGTTTGTTGTGTTTGACATC GTTTAGGAGGATGAGTATACTTTCCTTACTGAACTTTAACTGACTGAAAC AAAATGCTAATGCTGCATGGATGTGTAATTCACGAAATTTGATCTTCTGA ATTTGATGGTTGTTAGTAGAAAAAATTATTAGACTCATTAAAATAGAAGG TTTATTAAAGACCATTAAAGTAAAACTTCGACAATTTGAAACTTTGTTTG TTGACCTAAAGATAGACAATCCACGTTCCTTAGAGGAACCACCCTGCCAT TCAGGTCAAATTGATTTATCCCGGCAAATATGGAAATATTTAAAATAATC AAAAATAGCATGTAATTATTTAAATAATTTATTTGAATATTTTACCCTGA AAACATTTTCCCAAATCAAACTAGCAATACAAACTTTGATAAATGCTTTG GTTTTTTAATCATATTTTACTAAAGAAATAATGGTTTATAGGGTTTACAT GGCTAGATCATGTGACGTTGGAGTT

Coding sequence (CDS) from alignment at sc0000524:58175..64549-

>TCONS_00025168 ID=TCONS_00025168|Name=TCONS_00025168|organism=Clytia hemisphaerica|type=CDS|length=5355bp|location=Sequence derived from alignment at sc0000524:58175..64549- (Clytia hemisphaerica)
ATGGGCGAGCAGGTCATCCTCCTACACCCCAACGTGTGATGGATTCTTTT
GAAAGGAGTTCCTACCAAAACTCACAAGCTTCAATCGCAAGCTCAGGACT
TTGAGTCGAATGCGGATTTTGAACCGGGTGGAATTACGGTACGCAAGTGT
CATCGGACATAGCCCAAATAACAATGAACAAACAACACCTCTTCCATGGA
ATTACTATAATATTGTATGTTTGGTATATCAGTGATGTTACAGCCACAGA
TTGTGGTCTTGGTAGAAAACTTACCCAATGTACTGGCTTAACCAAAATTG
CACCTGCTTCTAAAAAAATAAATAACAGAAGAAAACGTTCTTCGTCCCCA
ATGCGGTCGCAGTCATTTAATGAAACATCATCGACGGAAACATGCAAATG
TTTAGAGGGGCCGTCTCACCATCAAGCGTATTACGACTGTGAAAATCAAA
ATGGCGAATGCGTAGAATCAAAAGTATACATTTTGAAAGGACGTTGGTGG
GATGAGTCGGATAGTCAAAAGACATACGCATGCCCGTTCGGTTATTGTAA
CTTGGGTGAAGGCAGATGTATTGGGAGAAACGATAGTGAAAGTTATTGTC
TATTTGATAAGACGAGTCAATGTTCTAAGGGCCGAGAGGGTCGTCTATGT
GGAAAATGCGCACAAAATTTGAGCGTCGCATTTGGGAGTGAAGACTGTAA
ACAGTGTAAAGACACCAATATACTTATCCTGTTGATTTTCTTCGCCATTT
TATCGATCCTAATTCTAGCGATTATCTATTTCAACGTGAACGCATTTTCA
GGATATTTTAACGCGTTTTTATATTCATATCAAGTAATGGGGGTTTTTAT
ACCCAAATATGTGGAACTAGACTTGGATCGTGTTTCGTTGTTTTTCATTT
ACGCGTTGGGGCTACAAGGAACTGGTAGTAATCTTGGTGTATGTTTTTAC
GATGGAATGGATAATCTTGATAAAATTGGACTTAATTTCGTCATTCCAGC
ATACATGATAGTTTTCACTGCAATAATTGGACGTTTTTTACCGAACCGTG
CTTGGCAATTTTTGCTGACTCATCAAACGGAAGGTTCGGCACCACGACGC
GTGTCAATCGGCCGCGCGTTCAGTTTTGTAGCTGTAATATGTTATTCACT
TATCACAACCATTACGTTAGACTTAATTGACCGTATCACGATTGATGGGA
AGGAGTACGTTTACAAAGCAGCGTTTGTTGAATATCTCGGAACACCTAAA
CATGAAGTACTTTTCGCTATGGCTATAATTAGTCTTATTCTTTTTGTGCT
TGGATTCCCAGCTTTATTATTCGGTTCATTTTGGTTTGCAAGGATATTTC
GAGACTGGATACAAATGCACAGGCTAGAACCCGTATTAAATAGCCTCAAG
AATTGTTTCAAACCCAAAATGACTTGGTTTGCTTCATTTTATTTCTTATG
TCGATTGACTATTCTTTTATTCACTGTTTTCATTAATGCAGATATTGTGA
GAGCTTTTTGCCTGGCTATGTCGTGTGGACTATTTCTCTTCATTTTTGCT
GTCTGCCAACCGTATAAAAGATGGCGGTTTAATTTTTGGGACTTGGTCCA
AATGACGAACATGTTATTTATAAGTATAACCGGACTGTTATTGCAGCATC
AATCTTCGATGAGACGGAAAATCAGAGATAGATTAATAGTCTTGTTGCGT
GTGTTGATTTATGTACCGCTGGTGATCGCATTTTCGAGGACTATCTTCTT
TTACACTTTGACGAGAATCAATAGAAGTCCTTGGTATGGGCGAGCAGGTC
ATCCTCCTACACCCCAACGTGTGATGGATTCTTTTGAAAGGAGTTCCTAC
CAAAACTCACAAGCTTCAATCGCAAGCTCAGGACTTTGAGTCGAATGCGG
ATTTTGAACCGGGTGGAATTACGGTACGCAAGTGTCATCGGACATAGCCC
AAATAACAATGAACAAACAACACCTCTTCCATGGAATTACTATAATATTG
TATGTTTGGTATATCAGTGATGTTACAGCCACAGATTGTGGTCTTGGTAG
AAAACTTACCCAATGTACTGGCTTAACCAAAATTGCACCTGCTTCTAAAA
AAATAAATAACAGAAGAAAACGTTCTTCGTCCCCAATGCGGTCGCAGTCA
TTTAATGAAACATCATCGACGGAAACATGCAAATGTTTAGAGGGGCCGTC
TCACCATCAAGCGTATTACGACTGTGAAAATCAAAATGGCGAATGCGTAG
AATCAAAAGTATACATTTTGAAAGGACGTTGGTGGGATGAGTCGGATAGT
CAAAAGACATACGCATGCCCGTTCGGTTATTGTAACTTGGGTGAAGGCAG
ATGTATTGGGAGAAACGATAGTGAAAGTTATTGTCTATTTGATAAGACGA
GTCAATGTTCTAAGGGCCGAGAGGGTCGTCTATGTGGAAAATGCGCACAA
AATTTGAGCGTCGCATTTGGGAGTGAAGACTGTAAACAGTGTAAAGACAC
CAATATACTTATCCTGTTGATTTTCTTCGCCATTTTATCGATCCTAATTC
TAGCGATTATCTATTTCAACGTGAACGCATTTTCAGGATATTTTAACGCG
TTTTTATATTCATATCAAGTAATGGGGGTTTTTATACCCAAATATGTGGA
ACTAGACTTGGATCGTGTTTCGTTGTTTTTCATTTACGCGTTGGGGCTAC
AAGGAACTGGTAGTAATCTTGGTGTATGTTTTTACGATGGAATGGATAAT
CTTGATAAAATTGGACTTAATTTCGTCATTCCAGCATACATGATAGTTTT
CACTGCAATAATTGGACGTTTTTTACCGAACCGTGCTTGGCAATTTTTGC
TGACTCATCAAACGGAAGGTTCGGCACCACGACGCGTGTCAATCGGCCGC
GCGTTCAGTTTTGTAGCTGTAATATGTTATTCACTTATCACAACCATTAC
GTTAGACTTAATTGACCGTATCACGATTGATGGGAAGGAGTACGTTTACA
AAGCAGCGTTTGTTGAATATCTCGGAACACCTAAACATGAAGTACTTTTC
GCTATGGCTATAATTAGTCTTATTCTTTTTGTGCTTGGATTCCCAGCTTT
ATTATTCGGTTCATTTTGGTTTGCAAGGATATTTCGAGACTGGATACAAA
TGCACAGGCTAGAACCCGTATTAAATAGCCTCAAGAATTGTTTCAAACCC
AAAATGACTTGGTTTGCTTCATTTTATTTCTTATGTCGATTGACTATTCT
TTTATTCACTGTTTTCATTAATGCAGATATTGTGAGAGCTTTTTGCCTGG
CTATGTCGTGTGGACTATTTCTCTTCATTTTTGCTGTCTGCCAACCGTAT
AAAAGATGGCGGTTTAATTTTTGGGACTTGGTCCAAATGACGAACATGTT
ATTTATAAGTATAACCGGACTGTTATTGCAGCATCAATCTTCGATGAGAC
GGAAAATCAGAGATAGATTAATAGTCTTGTTGCGTGTGTTGATTTATGTA
CCGCTGGTGATCGCATTTTCGAGGACTATCTTCTTTTACACTTTGACGAG
AATCAATAGAAGTCCTTGGTATGGGCGAGCAGGTCATCCTCCTACACCCC
AACGTGTGATGGATTCTTTTGAAAGGAGTTCCTACCAAAACTCACAAGCT
TCAATCGCAAGCTCAGGACTTTGAGTCGAATGCGGATTTTGAACCGGGTG
GAATTACGGTACGCAAGTGTCATCGGACATAGCCCAAATAACAATGAACA
AACAACACCTCTTCCATGGAATTACTATAATATTGTATGTTTGGTATATC
AGTGATGTTACAGCCACAGATTGTGGTCTTGGTAGAAAACTTACCCAATG
TACTGGCTTAACCAAAATTGCACCTGCTTCTAAAAAAATAAATAACAGAA
GAAAACGTTCTTCGTCCCCAATGCGGTCGCAGTCATTTAATGAAACATCA
TCGACGGAAACATGCAAATGTTTAGAGGGGCCGTCTCACCATCAAGCGTA
TTACGACTGTGAAAATCAAAATGGCGAATGCGTAGAATCAAAAGTATACA
TTTTGAAAGGACGTTGGTGGGATGAGTCGGATAGTCAAAAGACATACGCA
TGCCCGTTCGGTTATTGTAACTTGGGTGAAGGCAGATGTATTGGGAGAAA
CGATAGTGAAAGTTATTGTCTATTTGATAAGACGAGTCAATGTTCTAAGG
GCCGAGAGGGTCGTCTATGTGGAAAATGCGCACAAAATTTGAGCGTCGCA
TTTGGGAGTGAAGACTGTAAACAGTGTAAAGACACCAATATACTTATCCT
GTTGATTTTCTTCGCCATTTTATCGATCCTAATTCTAGCGATTATCTATT
TCAACGTGAACGCATTTTCAGGATATTTTAACGCGTTTTTATATTCATAT
CAAGTAATGGGGGTTTTTATACCCAAATATGTGGAACTAGACTTGGATCG
TGTTTCGTTGTTTTTCATTTACGCGTTGGGGCTACAAGGAACTGGTAGTA
ATCTTGGTGTATGTTTTTACGATGGAATGGATAATCTTGATAAAATTGGA
CTTAATTTCGTCATTCCAGCATACATGATAGTTTTCACTGCAATAATTGG
ACGTTTTTTACCGAACCGTGCTTGGCAATTTTTGCTGACTCATCAAACGG
AAGGTTCGGCACCACGACGCGTGTCAATCGGCCGCGCGTTCAGTTTTGTA
GCTGTAATATGTTATTCACTTATCACAACCATTACGTTAGACTTAATTGA
CCGTATCACGATTGATGGGAAGGAGTACGTTTACAAAGCAGCGTTTGTTG
AATATCTCGGAACACCTAAACATGAAGTACTTTTCGCTATGGCTATAATT
AGTCTTATTCTTTTTGTGCTTGGATTCCCAGCTTTATTATTCGGTTCATT
TTGGTTTGCAAGGATATTTCGAGACTGGATACAAATGCACAGGCTAGAAC
CCGTATTAAATAGCCTCAAGAATTGTTTCAAACCCAAAATGACTTGGTTT
GCTTCATTTTATTTCTTATGTCGATTGACTATTCTTTTATTCACTGTTTT
CATTAATGCAGATATTGTGAGAGCTTTTTGCCTGGCTATGTCGTGTGGAC
TATTTCTCTTCATTTTTGCTGTCTGCCAACCGTATAAAAGATGGCGGTTT
AATTTTTGGGACTTGGTCCAAATGACGAACATGTTATTTATAAGTATAAC
CGGACTGTTATTGCAGCATCAATCTTCGATGAGACGGAAAATCAGAGATA
GATTAATAGTCTTGTTGCGTGTGTTGATTTATGTACCGCTGGTGATCGCA
TTTTCGAGGACTATCTTCTTTTACACTTTGACGAGAATCAATAGAAGTCC
TTGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014137XLOC_014137Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025168-proteinTCONS_00025168-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025168-exon-sc0000524-1575043694:64376..64549TCONS_00025168-exon-sc0000524-1575043694:64376..64549Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1575043694:62030..63676TCONS_00025168-exon-sc0000524-1575043694:62030..63676Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1575043694:60622..60690TCONS_00025168-exon-sc0000524-1575043694:60622..60690Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1575043694:58175..59308TCONS_00025168-exon-sc0000524-1575043694:58175..59308Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1510915933:64376..64549TCONS_00025168-exon-sc0000524-1510915933:64376..64549Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1510915933:62030..63676TCONS_00025168-exon-sc0000524-1510915933:62030..63676Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1510915933:60622..60690TCONS_00025168-exon-sc0000524-1510915933:60622..60690Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1510915933:58175..59308TCONS_00025168-exon-sc0000524-1510915933:58175..59308Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1491911889:64376..64549TCONS_00025168-exon-sc0000524-1491911889:64376..64549Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1491911889:62030..63676TCONS_00025168-exon-sc0000524-1491911889:62030..63676Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1491911889:60622..60690TCONS_00025168-exon-sc0000524-1491911889:60622..60690Clytia hemisphaericaexon
TCONS_00025168-exon-sc0000524-1491911889:58175..59308TCONS_00025168-exon-sc0000524-1491911889:58175..59308Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000524supercontigsc0000524:58175..64549 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.729928 1.03147 0 0 3.13048 2.38767 3.94888 4.60716 2.80161 3.66 2.6474 1.96164 5.63468 3.66134 2.43617 4.43042 3.56469 6.08459 1.92094 0.904219 0.778448 1.14807 3.28248 2.72717 3.8903 2.64969 16.226 11.0755 6.85054 2.4443
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025168 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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