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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025160 ID=TCONS_00025160|Name=TCONS_00025160|organism=Clytia hemisphaerica|type=transcript|length=1000bp
GTTTTTAATCAACTTTCTCGCTAATTCCAATCATTCTGTAATTCTAAATA
AAACATACTAGTCAACAACTAGTCAACTTAGCTCAGCTGGAATGAAGAGT
TATATATGACCTGTAAAAAattgaatctttctctaatttaagaatttttc
tagctgtgaagatcgaattagagagaatcaaCTATAGATACTTGAAAAAC
TACTTTTTAACGGCGTtcgacggcatgtgccgccaaaatgtttactttta
aaatcggacccttacagacTGACAAAAGATTTGagctaaattttttttaa
atcatttggTTTATTTGTCACAAAGTGGATCTATGGCCCGAGTAGGGGGG
CACTCGGTTTCTGAACGACGCCATGTGCCGCTAAAAAGTTAGCttttaaa
atcggacccttacgttacagtgcattttaccatACCTTTCTGACCCTCAC
AGTGcattttgatttcatatcttattttaaACGAGCCTGTGCCGTCAACA
CGATATGCAAAGCAAATCAGTTCACTCAAttaaaagtacacccttacagt
gcatttcgaggctcttaaaaacctacccttaagtgcggcacatgccgtgg
gtcggacTATATGAGTGCCCCCTTCCTCNAGGCTCTTAAAAACCAACCCT
TAAGAGCagcacatgccgtgggtcggacTATATGAGTGCCCCCCTTCTTG
AATCTATGGTAAGTTTAAGTTTTTATAAACAACTTCTTATTCACATTATG
CAAAAACATTGATTTGTATACGTTTAATCTAACTACCAATCATATCGCTA
GCCTACGGTATACTTTTCACaatggcaaatttttgaatttattttattca
CAGCATAAATACTACCTTAAGGgcagaaattttggcgggaatttaattag
gcggatggctgaaaaagttttttcgtaggggatttaatttggttgATGAC
GGATTAGGGTGAAAACATTGATATCGGGGGTAAATTGTGGAAAATCggac Run BLAST on NCBI transcript from alignment at sc0000521:161109..162108 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025160 ID=TCONS_00025160|Name=TCONS_00025160|organism=Clytia hemisphaerica|type=transcript|length=1000bp|location=Sequence derived from alignment at sc0000521:161109..162108 (Clytia hemisphaerica)
gtccGATTTTCCACAATTTACCCCCGATATCAATGTTTTCACCCTAATCC
GTCATcaaccaaattaaatcccctacgaaaaaactttttcagccatccgc
ctaattaaattcccgccaaaatttctgcCCTTAAGGTAGTATTTATGCTG
tgaataaaataaattcaaaaatttgccattGTGAAAAGTATACCGTAGGC
TAGCGATATGATTGGTAGTTAGATTAAACGTATACAAATCAATGTTTTTG
CATAATGTGAATAAGAAGTTGTTTATAAAAACTTAAACTTACCATAGATT
CAAGAAGGGGGGCACTCATATAgtccgacccacggcatgtgctGCTCTTA
AGGGTTGGTTTTTAAGAGCCTNGAGGAAGGGGGCACTCATATAgtccgac
ccacggcatgtgccgcacttaagggtaggtttttaagagcctcgaaatgc
actgtaagggtgtacttttaaTTGAGTGAACTGATTTGCTTTGCATATCG
TGTTGACGGCACAGGCTCGTttaaaataagatatgaaatcaaaatgCACT
GTGAGGGTCAGAAAGGTatggtaaaatgcactgtaacgtaagggtccgat
tttaaaaGCTAACTTTTTAGCGGCACATGGCGTCGTTCAGAAACCGAGTG
CCCCCCTACTCGGGCCATAGATCCACTTTGTGACAAATAAAccaaatgat
ttaaaaaaaatttagctCAAATCTTTTGTCAgtctgtaagggtccgattt
taaaagtaaacattttggcggcacatgccgtcgaACGCCGTTAAAAAGTA
GTTTTTCAAGTATCTATAGttgattctctctaattcgatcttcacagcta
gaaaaattcttaaattagagaaagattcaatTTTTTACAGGTCATATATA
ACTCTTCATTCCAGCTGAGCTAAGTTGACTAGTTGTTGACTAGTATGTTT
TATTTAGAATTACAGAATGATTGGAATTAGCGAGAAAGTTGATTAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025160-exon-sc0000521-1491911889:161109..162108 | TCONS_00025160-exon-sc0000521-1491911889:161109..162108 | Clytia hemisphaerica | exon |
| TCONS_00025160-exon-sc0000521-1510915933:161109..162108 | TCONS_00025160-exon-sc0000521-1510915933:161109..162108 | Clytia hemisphaerica | exon |
| TCONS_00025160-exon-sc0000521-1575043694:161109..162108 | TCONS_00025160-exon-sc0000521-1575043694:161109..162108 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000521 | supercontig | sc0000521:161109..162108 . |
Blast
The following BLAST results are available for this feature:
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