TCONS_00025153 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025153
Unique NameTCONS_00025153
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2362

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025153 ID=TCONS_00025153|Name=TCONS_00025153|organism=Clytia hemisphaerica|type=transcript|length=2362bp
CAATGtccgaaattttaataaaaccaGAGAACATTCGAATTTCAACGCAG
TTCAGAAATCTACGTTCGACAGTCAACACACAGCAATAGACTCTAGttta
aatttgagaaaaaactttttgaagtcAGCTTGCAGGCTCATGTTGTATTT
cgttaaaaagtttaaatattTAACAGTTAATTTCGAATTCTCGTTGATAA
GTCTTTGAAGGACACCAAGAAGTTTTAGTTTGTTATAACATCCTATCTTA
CACATCACACCAACCATGNAAGGACACCAAGAAGTTTTAGTTTGTTATAA
CATCCTATCTTACACATCACACCAACCATGAATCCACCAGATGAGAAACC
TATGACTGGTGCAGTTGAAGAACAACTTCCTCAAGAAGAAGAAATCAAGG
AATCTTACGTTCCAAAAATGAAACCAGGAGATGTAGAAATTCCAAACCGT
GTTTTTGTGAAAGGTTTCCCGAGAGAAGCCACCGCAGATGATTTGTTCGT
CTTTTTTGAAGATTATGGGAAAGTGCTGGAATGCAGGATCGTTGCAGACC
GATATGGATACAGTAAagGTTATGGTTTCATCACATTCGATAGTCAAAGT
GTAGCTGATAAAGTCAAAGAGATGGAGCGTATAAAGTACAATGATGAGAT
CGAACTTGCCATTGGACCAGCACGCATCCGAAAGAAGCGATTCTATCTTT
TGCCAACACCCCAATATCAACAACCGCAAGCGTATTACACTCAAGATGGA
GCTGTCTTCTGGGCCACCTGTGTTCCACAACAACAGGTCATGCAACAACC
ACAAATCGTATCTCCAGTTCAAGTTGTACATCAATCACCTAACCCACCAA
GCTATCCATCGCCGCAACCAGTCTCCCAATCGTACGCACCAGTGACAGGT
CAACCAGCTTACACGAGCCCAATGCAACAACAGCAATATGCGACACCAGT
TCAACAAAGTTTCACAACACCGATACCTCAACAAAACTTTGGTACTCCAA
TGGGACAGAATTATGGAACACCAGTTGTTTTCTCTGTTGTAACCAGCGAA
CCTGGAAACTCACCAAGCCCATCAACACCATGCATGTATCAAAGTAACGG
TCCAAATATGAACACTTTGGTGGAGAAGGTTTCCGGAATGCAGATCTCAC
AATCTCCGATCTCCATGAATGATGATGCGATTGTACCGAATATGAACTAT
GTCGATATGCAATCAACTCAACAATCAATGAGTaCTCCAGAAGCTATTGT
ATACCACAACCCAGTTGTATCCTTTGTTCCTCAAACAAGACAGATCCAGT
GAAGTGTTTGGAGAGATTGGTACGGTTGTGTAGGCCTACGAAACAAGTGA
GATCTTCTTAAATCTAAACGAGGTTCGGGTGgcatatttatttatattta
atTCAATCCTTCATAcagtgtaaaaatgaacgtaaTTAACACTTTTCATT
CCCAATAAACAATTATTTTGTATCAATTTTTGTATCTACGGCCGTTCCTA
AACTCTCTGAATAGTTTTGTCCGCTTTTTGTTTGTGTTTGTGTTGTTTGT
CTCAATTTAAAACATTTATCATATGTGGAAAGCTACTTATACATTTTTGG
AATCCTTTTACAACTTCGATAAGATTCTTTTCCGTTGTGTCTCTGTGTCT
CTGAATTTTAGGAATGGCCATAAGACTGCTTTTCATACCAAATTTAACTG
AACAAATCTTAACTTATTGTAAATAGTCACAAAATTCTTCTTATAATATA
ATTTATTTCTTATTTTATTTATCATTATTATGTAACTTacaccaaaaaaa
tatttttatctaataTATATATAAACGACGCGGAattatattttatcaaa
aactgTTTCATATATCGGTTTTTTTCTCTTCACGGTTAAGGATTTCCCTT
AGCCTCATTCTTGTCCCATGTTTTCGTTtagtttttgtgtttttattttc
gttGTGTGTCCGTCATAGCATTACTTTTGAGCCATTAAATCTTACATAAA
TCACTCTGAAAAATAATAAGCGCTTTTAAAGTACTTTGTTGTTATTAatt
tttacttttgatttttttaattgtaattATTTAcctgaaaatgataaaat
ttgtagacataacattcttattttttaatatataatccttatattatcat
attattttttatAGATATATTGGTTTCTAAAATATTCCAATTCTAATGTT
CAAGAAAACTATATAAATTTGTTTATCTTTATTATTGGTTtaaattcata
atttattttcattcaatatttaTTCATCAATTATTTATTCATCTTAATTA
TTCTATTGttcaattcaaataaaaaaacaaaaaaaacagcggattaaaaa
tcccaaaaaaac
Run BLAST on NCBI

protein sequence of boule-like 2a

>TCONS_00025153-protein ID=TCONS_00025153-protein|Name=boule-like 2a|organism=Clytia hemisphaerica|type=polypeptide|length=324bp
MNPPDEKPMTGAVEEQLPQEEEIKESYVPKMKPGDVEIPNRVFVKGFPRE
ATADDLFVFFEDYGKVLECRIVADRYGYSKGYGFITFDSQSVADKVKEME
RIKYNDEIELAIGPARIRKKRFYLLPTPQYQQPQAYYTQDGAVFWATCVP
QQQVMQQPQIVSPVQVVHQSPNPPSYPSPQPVSQSYAPVTGQPAYTSPMQ
QQQYATPVQQSFTTPIPQQNFGTPMGQNYGTPVVFSVVTSEPGNSPSPST
PCMYQSNGPNMNTLVEKVSGMQISQSPISMNDDAIVPNMNYVDMQSTQQS
MSTPEAIVYHNPVVSFVPQTRQIQ
Run BLAST on NCBI

transcript from alignment at sc0000521:230922..234743-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025153 ID=TCONS_00025153|Name=TCONS_00025153|organism=Clytia hemisphaerica|type=transcript|length=3822bp|location=Sequence derived from alignment at sc0000521:230922..234743- (Clytia hemisphaerica)
CAATGTCCGAAATTTTAATAAAACCAGAGAACATTCGAATTTCAACGCAG
TTCAGAAATCTACGTTCGACAGTCAACACACAGCAATAGACTCTAGTTTA
AATTTGAGAAAAAACTTTTTGAAGTCAGCTTGCAGGCTCATGTTGTATTT
CGTTAAAAAGTTTAAATATTTAACAGTTAATTTCGAATTCTCGTTGATAA
GTCTTTGAAGGACACCAAGAAGTTTTAGTTTGTTATAACATCCTATCTTA
CACATCACACCAACCATGNAAGGACACCAAGAAGTTTTAGTTTGTTATAA
CATCCTATCTTACACATCACACCAACCATGAATCCACCAGATGAGAAACC
TATGACTGGTGCAGTTGAAGAACAACTTCCTCAAGAAGAAGAAATCAAGG
AATCTTACGTTCCAAAAATGAAACCAGGAGATGTAGAAATTCCAAACCGT
GTTTTTGTGAAAGGTTTCCCGAGAGAAGCCACCGCAGATGATTTGTTCGT
CTTTTTTGAAGATTATGGGAAAGTGCTGGAATGCAGGATCGTTGCAGACC
GATATGGATACAGTAAAGGTATCAAAAAACTTTCTCTTATTTCACTCTTG
CTAAATTAGTCTCAGATTCATAGTTAAATGTTGTATGCGATTAAAATTCC
GTTTGGTTTGTTAGTATAGGATTTCCTAGGATTTTTCGCATGAATTTGGT
AACTACAAGATTTTCAGTATTTTTGGGATTTTGTGAGACATTCAAGAGAG
TTTTTAGGGATTATTTTTTATAAGAACATCCAAAATTTTTGATGCCTTCT
ATTCAGATGTTCTGAACTTTTGAGTTTTAAGCTTGAAAATTTTCTAAACA
TGTTCTTATTTTTGCCATTATTTGAGTATTTTTTTGTCCATTTTCTTAAG
AAATCGGGTGTTTTAGAGTCTGCGAAGTCTTAACATTTTGGCTATCGAAG
ACTTACTTATGTTTTTATATAGTTTGTTCATATAAAAATGTGTAAGGCTG
GACTTAAGTAAGTCTGCGACCGCAGTCGGAGGCAACCCGAAGGCTCCTCT
TTCGATAGCTATCTACCAGAAGGTAGGGGAGGGCGCCACTCTTTCTCCCT
GGATTTCTCCACTTACCCTTGATCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAACCTTGCGAA
CCGTAGCCGGATGCTCTACCACTGCACTACGGTCGCTCGGCTGGACTTAA
AAAATTGTTGGTTTGGCGTCACCCGACCGACCCTACCTTAAAACCTGTCG
AGCCAAAAAAAATTATTGCCATTTTAAAGAAGAAATTTTTTTTTCTTCTA
AAACTTCAAACAATCAAATCAAATATTGTTGCTTTACTATTTGATAACCT
TTAAAAGCTACGAAAGAGTCTTCTTAACAAAATTTTCACATCATGTTTCA
GGTTATGGTTTCATCACATTCGATAGTCAAAGTGTAGCTGATAAAGTCAA
AGAGATGGAGCGTATAAAGTACAATGATGAGATCGAACTTGCCATTGGAC
CAGCACGCATCCGAAAGAAGCGATTCTATCTTTTGCCAACACCCCAATAT
CAACAACCGCAAGCGTATTACACTCAAGATGGAGCTGTCTTCTGGGCCAC
CTGTGTTCCACAACAACAGGTCATGCAACAACCACAAATCGTATCTCCAG
TTCAAGTTGTACATCAATCACCTAACCCACCAAGCTATCCATCGCCGCAA
CCAGTCTCCCAATCGTACGCACCAGTGACAGGTCAACCAGCTTACACGAG
CCCAATGCAACAACAGCAATATGCGACACCAGTTCAACAAAGTTTCACAA
CACCGATACCTCAACAAAACTTTGGTACTCCAATGGGACAGAATTATGGA
ACACCAGTTGTTTTCTCTGTTGTAACCAGCGAACCTGGAAACTCACCAAG
CCCATCAACACCATGCATGTATCAAAGTAAGTAACTTCTTACTTAAGGTA
GCTTTTGGGATTTGTCTTTTTTGTCTTTTGTCTTTTACTCTCCCACTTCT
ACTGTGCACACAAGTAAGCCCTAAGTTTTCTTAAAACGTTGCTTCTTTGT
AAGCTGAGAAAGAAAACTTTCAAAATCTTGAAATAACCTCGGCCAAAACT
TTAATTTTGATTAGGTCTTAACTGCCTTTAGGGTAACTATAAATTTTGTT
GCTATTGTGCTTCGAGTTTACTATACCACGAGTTTACTAAGATTCTTCTT
TACTTATTTTGTAGGTAACGGTCCAAATATGAACACTTTGGTGGAGAAGG
TTTCCGGAATGCAGATCTCACAATCTCCGATCTCCATGAATGATGATGCG
ATTGTACCGAATATGAACTATGTCGATATGCAATCAACTCAACAATCAAT
GAGTGTAAGTAGAATTGTGAAATTATCTCTTCATCAAAGCGTAATTTTAT
TGATTGGCGACGATTTTGTCACTACAATTTAATCGATTAATGAGAAATTA
GCTCGAATTACAGAGGTTTAAATTAAAGAAAGCATTCGTTGATAGCTGAA
ATAATTAAAACTTGTTGAATTATTCGCTACCAAATTGTTGGGTTGTACTT
AACCCTGTCTCACAGTTTCATTGATTTTGGAAACGATTAGATTTGTATTT
TTTCTGGTTGTTATTTAACCATGATTATTTTTTCATTTTACAGACTCCAG
AAGCTATTGTATACCACAACCCAGTTGTATCCTTTGTTCCTCAAACAAGA
CAGATCCAGTGAAGTGTTTGGAGAGATTGGTACGGTTGTGTAGGCCTACG
AAACAAGTGAGATCTTCTTAAATCTAAACGAGGTTCGGGTGGCATATTTA
TTTATATTTAATTCAATCCTTCATACAGTGTAAAAATGAACGTAATTAAC
ACTTTTCATTCCCAATAAACAATTATTTTGTATCAATTTTTGTATCTACG
GCCGTTCCTAAACTCTCTGAATAGTTTTGTCCGCTTTTTGTTTGTGTTTG
TGTTGTTTGTCTCAATTTAAAACATTTATCATATGTGGAAAGCTACTTAT
ACATTTTTGGAATCCTTTTACAACTTCGATAAGATTCTTTTCCGTTGTGT
CTCTGTGTCTCTGAATTTTAGGAATGGCCATAAGACTGCTTTTCATACCA
AATTTAACTGAACAAATCTTAACTTATTGTAAATAGTCACAAAATTCTTC
TTATAATATAATTTATTTCTTATTTTATTTATCATTATTATGTAACTTAC
ACCAAAAAAATATTTTTATCTAATATATATATAAACGACGCGGAATTATA
TTTTATCAAAAACTGTTTCATATATCGGTTTTTTTCTCTTCACGGTTAAG
GATTTCCCTTAGCCTCATTCTTGTCCCATGTTTTCGTTTAGTTTTTGTGT
TTTTATTTTCGTTGTGTGTCCGTCATAGCATTACTTTTGAGCCATTAAAT
CTTACATAAATCACTCTGAAAAATAATAAGCGCTTTTAAAGTACTTTGTT
GTTATTAATTTTTACTTTTGATTTTTTTAATTGTAATTATTTACCTGAAA
ATGATAAAATTTGTAGACATAACATTCTTATTTTTTAATATATAATCCTT
ATATTATCATATTATTTTTTATAGATATATTGGTTTCTAAAATATTCCAA
TTCTAATGTTCAAGAAAACTATATAAATTTGTTTATCTTTATTATTGGTT
TAAATTCATAATTTATTTTCATTCAATATTTATTCATCAATTATTTATTC
ATCTTAATTATTCTATTGTTCAATTCAAATAAAAAAACAAAAAAAACAGC
GGATTAAAAATCCCAAAAAAAC

Coding sequence (CDS) from alignment at sc0000521:230922..234743-

>TCONS_00025153 ID=TCONS_00025153|Name=TCONS_00025153|organism=Clytia hemisphaerica|type=CDS|length=3900bp|location=Sequence derived from alignment at sc0000521:230922..234743- (Clytia hemisphaerica)
ACTCCAGAAGCTATTGTATACCACAACCCAGTTGTATCCTTTGTTCCTCA
AACAAGACAGATCCAGTGAGTAACGGTCCAAATATGAACACTTTGGTGGA
GAAGGTTTCCGGAATGCAGATCTCACAATCTCCGATCTCCATGAATGATG
ATGCGATTGTACCGAATATGAACTATGTCGATATGCAATCAACTCAACAA
TCAATGAGTGTTATGGTTTCATCACATTCGATAGTCAAAGTGTAGCTGAT
AAAGTCAAAGAGATGGAGCGTATAAAGTACAATGATGAGATCGAACTTGC
CATTGGACCAGCACGCATCCGAAAGAAGCGATTCTATCTTTTGCCAACAC
CCCAATATCAACAACCGCAAGCGTATTACACTCAAGATGGAGCTGTCTTC
TGGGCCACCTGTGTTCCACAACAACAGGTCATGCAACAACCACAAATCGT
ATCTCCAGTTCAAGTTGTACATCAATCACCTAACCCACCAAGCTATCCAT
CGCCGCAACCAGTCTCCCAATCGTACGCACCAGTGACAGGTCAACCAGCT
TACACGAGCCCAATGCAACAACAGCAATATGCGACACCAGTTCAACAAAG
TTTCACAACACCGATACCTCAACAAAACTTTGGTACTCCAATGGGACAGA
ATTATGGAACACCAGTTGTTTTCTCTGTTGTAACCAGCGAACCTGGAAAC
TCACCAAGCCCATCAACACCATGCATGTATCAAAATGAATCCACCAGATG
AGAAACCTATGACTGGTGCAGTTGAAGAACAACTTCCTCAAGAAGAAGAA
ATCAAGGAATCTTACGTTCCAAAAATGAAACCAGGAGATGTAGAAATTCC
AAACCGTGTTTTTGTGAAAGGTTTCCCGAGAGAAGCCACCGCAGATGATT
TGTTCGTCTTTTTTGAAGATTATGGGAAAGTGCTGGAATGCAGGATCGTT
GCAGACCGATATGGATACAGTAAAGACTCCAGAAGCTATTGTATACCACA
ACCCAGTTGTATCCTTTGTTCCTCAAACAAGACAGATCCAGTGAGTAACG
GTCCAAATATGAACACTTTGGTGGAGAAGGTTTCCGGAATGCAGATCTCA
CAATCTCCGATCTCCATGAATGATGATGCGATTGTACCGAATATGAACTA
TGTCGATATGCAATCAACTCAACAATCAATGAGTGTTATGGTTTCATCAC
ATTCGATAGTCAAAGTGTAGCTGATAAAGTCAAAGAGATGGAGCGTATAA
AGTACAATGATGAGATCGAACTTGCCATTGGACCAGCACGCATCCGAAAG
AAGCGATTCTATCTTTTGCCAACACCCCAATATCAACAACCGCAAGCGTA
TTACACTCAAGATGGAGCTGTCTTCTGGGCCACCTGTGTTCCACAACAAC
AGGTCATGCAACAACCACAAATCGTATCTCCAGTTCAAGTTGTACATCAA
TCACCTAACCCACCAAGCTATCCATCGCCGCAACCAGTCTCCCAATCGTA
CGCACCAGTGACAGGTCAACCAGCTTACACGAGCCCAATGCAACAACAGC
AATATGCGACACCAGTTCAACAAAGTTTCACAACACCGATACCTCAACAA
AACTTTGGTACTCCAATGGGACAGAATTATGGAACACCAGTTGTTTTCTC
TGTTGTAACCAGCGAACCTGGAAACTCACCAAGCCCATCAACACCATGCA
TGTATCAAAATGAATCCACCAGATGAGAAACCTATGACTGGTGCAGTTGA
AGAACAACTTCCTCAAGAAGAAGAAATCAAGGAATCTTACGTTCCAAAAA
TGAAACCAGGAGATGTAGAAATTCCAAACCGTGTTTTTGTGAAAGGTTTC
CCGAGAGAAGCCACCGCAGATGATTTGTTCGTCTTTTTTGAAGATTATGG
GAAAGTGCTGGAATGCAGGATCGTTGCAGACCGATATGGATACAGTAAAG
ACTCCAGAAGCTATTGTATACCACAACCCAGTTGTATCCTTTGTTCCTCA
AACAAGACAGATCCAGTGAGTAACGGTCCAAATATGAACACTTTGGTGGA
GAAGGTTTCCGGAATGCAGATCTCACAATCTCCGATCTCCATGAATGATG
ATGCGATTGTACCGAATATGAACTATGTCGATATGCAATCAACTCAACAA
TCAATGAGTGTTATGGTTTCATCACATTCGATAGTCAAAGTGTAGCTGAT
AAAGTCAAAGAGATGGAGCGTATAAAGTACAATGATGAGATCGAACTTGC
CATTGGACCAGCACGCATCCGAAAGAAGCGATTCTATCTTTTGCCAACAC
CCCAATATCAACAACCGCAAGCGTATTACACTCAAGATGGAGCTGTCTTC
TGGGCCACCTGTGTTCCACAACAACAGGTCATGCAACAACCACAAATCGT
ATCTCCAGTTCAAGTTGTACATCAATCACCTAACCCACCAAGCTATCCAT
CGCCGCAACCAGTCTCCCAATCGTACGCACCAGTGACAGGTCAACCAGCT
TACACGAGCCCAATGCAACAACAGCAATATGCGACACCAGTTCAACAAAG
TTTCACAACACCGATACCTCAACAAAACTTTGGTACTCCAATGGGACAGA
ATTATGGAACACCAGTTGTTTTCTCTGTTGTAACCAGCGAACCTGGAAAC
TCACCAAGCCCATCAACACCATGCATGTATCAAAATGAATCCACCAGATG
AGAAACCTATGACTGGTGCAGTTGAAGAACAACTTCCTCAAGAAGAAGAA
ATCAAGGAATCTTACGTTCCAAAAATGAAACCAGGAGATGTAGAAATTCC
AAACCGTGTTTTTGTGAAAGGTTTCCCGAGAGAAGCCACCGCAGATGATT
TGTTCGTCTTTTTTGAAGATTATGGGAAAGTGCTGGAATGCAGGATCGTT
GCAGACCGATATGGATACAGTAAAGACTCCAGAAGCTATTGTATACCACA
ACCCAGTTGTATCCTTTGTTCCTCAAACAAGACAGATCCAGTGAGTAACG
GTCCAAATATGAACACTTTGGTGGAGAAGGTTTCCGGAATGCAGATCTCA
CAATCTCCGATCTCCATGAATGATGATGCGATTGTACCGAATATGAACTA
TGTCGATATGCAATCAACTCAACAATCAATGAGTGTTATGGTTTCATCAC
ATTCGATAGTCAAAGTGTAGCTGATAAAGTCAAAGAGATGGAGCGTATAA
AGTACAATGATGAGATCGAACTTGCCATTGGACCAGCACGCATCCGAAAG
AAGCGATTCTATCTTTTGCCAACACCCCAATATCAACAACCGCAAGCGTA
TTACACTCAAGATGGAGCTGTCTTCTGGGCCACCTGTGTTCCACAACAAC
AGGTCATGCAACAACCACAAATCGTATCTCCAGTTCAAGTTGTACATCAA
TCACCTAACCCACCAAGCTATCCATCGCCGCAACCAGTCTCCCAATCGTA
CGCACCAGTGACAGGTCAACCAGCTTACACGAGCCCAATGCAACAACAGC
AATATGCGACACCAGTTCAACAAAGTTTCACAACACCGATACCTCAACAA
AACTTTGGTACTCCAATGGGACAGAATTATGGAACACCAGTTGTTTTCTC
TGTTGTAACCAGCGAACCTGGAAACTCACCAAGCCCATCAACACCATGCA
TGTATCAAAATGAATCCACCAGATGAGAAACCTATGACTGGTGCAGTTGA
AGAACAACTTCCTCAAGAAGAAGAAATCAAGGAATCTTACGTTCCAAAAA
TGAAACCAGGAGATGTAGAAATTCCAAACCGTGTTTTTGTGAAAGGTTTC
CCGAGAGAAGCCACCGCAGATGATTTGTTCGTCTTTTTTGAAGATTATGG
GAAAGTGCTGGAATGCAGGATCGTTGCAGACCGATATGGATACAGTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014122XLOC_014122Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025153-exon-sc0000521-1575043694:234176..234743TCONS_00025153-exon-sc0000521-1575043694:234176..234743Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1575043694:232768..233292TCONS_00025153-exon-sc0000521-1575043694:232768..233292Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1575043694:232340..232479TCONS_00025153-exon-sc0000521-1575043694:232340..232479Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1575043694:230922..232050TCONS_00025153-exon-sc0000521-1575043694:230922..232050Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1510915933:234176..234743TCONS_00025153-exon-sc0000521-1510915933:234176..234743Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1510915933:232768..233292TCONS_00025153-exon-sc0000521-1510915933:232768..233292Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1510915933:232340..232479TCONS_00025153-exon-sc0000521-1510915933:232340..232479Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1510915933:230922..232050TCONS_00025153-exon-sc0000521-1510915933:230922..232050Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1491911889:234176..234743TCONS_00025153-exon-sc0000521-1491911889:234176..234743Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1491911889:232768..233292TCONS_00025153-exon-sc0000521-1491911889:232768..233292Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1491911889:232340..232479TCONS_00025153-exon-sc0000521-1491911889:232340..232479Clytia hemisphaericaexon
TCONS_00025153-exon-sc0000521-1491911889:230922..232050TCONS_00025153-exon-sc0000521-1491911889:230922..232050Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
boule-like 2aTCONS_00025153-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000521supercontigsc0000521:230922..234743 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0321378	0.0186576	0	0.199997	0.119076	0.0847417	0.178502	0.047081	0.136074	0.166947	0.0658467	0.0990872	0.0569061	0.168424	0.050207	0.0494807	0.012679	0.105101	0.145014	0	0	0.0213533	0.0194133	251.72	206.501	0.612876	0.763091	0.0365792	0.0186342
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00025153 vs. Swiss-Prot (Human)
Match: BOLL (Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 6.600e-17
Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 1 
Query:  439 IPNRVFVKGFPREATADDLFVFFEDYGKVLECRIVADRYGYSKGYGFITFDSQSVADKV-KEMERIKYNDEIELAIGPARIRKKR 690
            IPNR+FV G   +    DL  FF  YG V E +IV DR G SKGYGF+TF++Q  A K+ +E E++ Y D+ +L IGPA IRK++
Sbjct:   31 IPNRIFVGGIDFKTNESDLRKFFSQYGSVKEVKIVNDRAGVSKGYGFVTFETQEDAQKILQEAEKLNYKDK-KLNIGPA-IRKQQ 113
The following BLAST results are available for this feature:
BLAST of TCONS_00025153 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BOLL6.600e-1750.59Protein boule-like OS=Homo sapiens GN=BOLL PE=1 SV... [more]
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