TCONS_00025148 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025148
Unique NameTCONS_00025148
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2229

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025148 ID=TCONS_00025148|Name=TCONS_00025148|organism=Clytia hemisphaerica|type=transcript|length=2229bp
AGTTCCTTTTTGGATTGAGAAGTTTCCTGGAGACTTCGCCCGCATATTCG
ATTCTGTGATTATTGCTGCGTAGAAGAATGAGATTTTGTTATTGATGATC
ATTTTTCGTTGCAACTGACAATTTGATGTCCGGAAAGTTTAACatttgat
cagGATGACGTTCAATCAGTTGGACACTGACGACGAAAGTACCGAGAATG
ACCGACTTTTATCGAAGAAAACTCGCAAACAACGACAATCACCTAAATCT
CAACGAAATCCCGAATCTCCTAACAAAGATGCCTCAAAATGGGAACGGAT
TACATCAGCCATTAGAAAGAGGCTGAAAAAAGATGGCCTTAGGATGGTCT
TACTTATTATCTTGAATGGATTTTACCTCTACTTTGGTGGAGTGGTATTC
TATTTGCTGGAGACGAAACCAAAGTTTGTCGTGGATAAAAGGAAACACGT
TGAAATGCTGTTCAACACTTTTAAGAGTTTACATTTGACCGCTGACCACA
TGATGATGAATATCAGCAATATTTCAACACATGACGTCAATAAAATATCA
TCTGTTCTGCAAAATATTCATTCTGAATTTtcagaaagtgaaagtgaaag
ctGGACAGTCACGAATGCTGTCTTTTTTGCATCAACTGTTGTTACTACTA
TAGGTTACGGTAATATGGCGCCCGTGACAACAGGAGGGCGTTGGTTTTGT
GTATTTTACGCCATCGTTGGCGTCCCGTTGACTGTCATGTTACTCGCact
tgttggaaagataatttcgAAATACATCAATCACTTGTGTAACTTCATTG
TCAAAACGCTGAGGGAATATCTTTATTCCAAATATGAATATGAGCaGGTT
GACGAAGGAACAGAGCTTCGAGCACCAGTCTGGTTGGCTCTTCTCTTCAT
GCTTTTGGTGACTTCGATATTCGCACTGATGTTCATGAAGATGGAACAGT
GGTCATTCTCCAAATCACTTTATTTCATCTTCATTACGTTTACCACGATT
GGTTTTGGTGATATTGTACCACATAATGATAATgCAATTTGGTTTAATGT
CACTTTCCTTTACATTGGACTGGCTGCATTGTCCATTACCATAAACCTCT
TGATTGCAAATATCACACATCAATAtcgaaaacataaacaaaaaattaag
attgttCAGAAAATCGAAGAAGAACTAGAGGACTCGGACGAGGAAACTTT
ACCGGCAGACGAAAATGGTGACGTCACCGAAATGGCAGATTTTACTAATG
GTGGTAATGGTGGCGGTAAAGTGGCGGGTGATTCCCTGCGACGTTTATCG
AATACACCCGTTGATAATAATTCGAATAACAACGAAAACAATAATgataa
aaatcttcaaaactttGGGGATGGACTATAAACGTTAATAGTTTTAggca
gtctgtgccactaactcgatcgggaagattcttccgaaatgggaagaacc
ttcccgaatGGGAAGAACTTACTCTAATTTTTCTCTGCCGgtttgggaag
attcttcctctttgggaagttgaaaattgactgaatcttcggtgaagctg
tacgatgaccggcgaaagttgaaaacttttggaggtgaaaaagcatcaaa
ttttaaggtttttcaccgaaagaaaaGTAGGCTTTACTGTAGAAAACTTG
TTAGATTGTGAAAAAACTGCGTAaacttcccaaacgggaagttCCAACCC
GATCGACTTTTCCTTATTTTCCCGCTTCTTCCCGATCTGGAAGTCCGTTT
TTTAACTCTTACCCGTTTAGGGTGTCAAGTTAATTTCTCattcgggaagg
ttcttcccatttcggaagaatcttcccgatcgagttagtggcacagactg
ttaGGTGTGTTGTATTAGTGCGATTATAATAGTATGTCTTTTTATGTCCT
ATTACCATGAGTTTCACCTTAGCTGGTGATTAAGATATTCACAGCGGTGA
ATGGTGAATTTTTTTGTCCCTCCGTCTTCGCCAGACCAAAATACAACCCC
TGTAGAAGTTAACATGCATTCAGCTTTCAAAACAACACCGAGGAAAATGT
AGTCACAGACAATGTAGTTTGAATCGCGGCCCTCTATAGATAAACTccct
atacacgtttttttttttattagaacacctaaaatttgtctgagcctgga
tgtgcttatttttttagcaattttcagcctaaaatgttcttaaatgcgtt
cttaatttttcagactactctaaatcgac
Run BLAST on NCBI

transcript from alignment at sc0000521:166715..181341-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025148 ID=TCONS_00025148|Name=TCONS_00025148|organism=Clytia hemisphaerica|type=transcript|length=14627bp|location=Sequence derived from alignment at sc0000521:166715..181341- (Clytia hemisphaerica)
AGTTCCTTTTTGGATTGAGAAGTTTCCTGGAGACTTCGCCCGCATATTCG
ATTCTGTGATTATTGCTGCGTAGAAGAATGAGATTTTGTTATTGATGATC
ATTTTTCGTTGCAACTGACAATTTGATGTCCGGAAAGTTTAACATTTGAT
CAGGTATGTTTTTATTACAGTTGACCCTCTTTTATTGGAAATCTTTTTTG
ATCGAATAACAAGAGTTTCGAATTACAAAAGAATTACATTCTATTTTGTA
GGGGGCTAAGATTTTGTTCGAATTATAAAAAAATTCGTAAAATTGAAGTT
TGAATTATCGAGAGTCCATAGTTTTATATTTCTCAATGTGCTCGTGTCTT
CATAACTAGTGACTAAATAGGAGAACCAGTCTGTTTGCATTAACGAGAGG
TAGTAATAATCGAACACTCTCTCAATAGACATTTCCGATAGTCCGATTTA
TGAAGAGTTGACTTACTCTTTCAAGATTATTCATAATGTTAAAAGCCGTA
ATGTCGGGTCTGGGGTGTTTGTTCCTGCCTTGACCGGTAGTCAAAAAATC
AATTAAAAAGAGCTTTACAAGAATAATTTTATAAAAACAAGGAGGCTAAT
ATCGCTCAAAATTAGAAAAGTTTAATATCGAATGCTTCGGAATTTCAAGC
GGTTTAAGAGTTAAAACAGTAAATATTGAGTGTAAAGCTAGTCTAGCAAG
CTAGACGACTAATTCAGACGTAGTAAAATAAAGCAAAAAGTAATGGAGGG
AACAATTTTAGTTTATTGAAACTAAATCCCGTAACAATAATCGTAACACG
CATTATAAATGACTTCAGTCTAGTATAAAGCCTGACTTAAAGGGGACGTC
AATTTTTGCCATACATTTTTTGTTACATTTAGAAAATTTAGAACAAGACG
ATCAAAACGAGCTATATATTATTATTATTACGTTTTTTTCTCAATGCGTA
ATAATAGACGTTTGAAAATGTCCCTTCTTTTTAAATCTGTGACGTAACAA
AAGTGCTTCTCCACTTTTTTTTCATCGTAGGTATCTATTCTAAAAAAATG
GTAAAAATGATATTCCAAAGCTGACGTCCCCTTTAAATACATCAATTTCG
GTCAAAAAATAAGAACAGGATAAGAAGATTACGAGTCTTAAAATGTTAAA
TTGATAAGTACAATTAACTTAAAACCAAAGTTGATATTAAAAAAATCATT
TTTAGCTGGTTAGATTTTCTGGTCTGTAAAGATTTGAGAAAGTGGCTCTA
TTTCCTAATTTTCCAAGATCGGGAGAGAGAGCTGACAAACTCTATTTAGT
AAATCAAAATGAATACTAGGAACTTTTGGAACCCCAACGCTATTTTTTAA
GAACAAATCTCAAATCTAGATTTCTGTCCTTCTAAAGATATTTTCATAGT
ATTATCTCTAATGCTACCGATTGCTTTTGAAAATGATATGCACTTGCAAA
TAAAATTTGCTAAAGTCACATTATTAGCAATTCTAGTCTATAGCGGGTCA
GTTTCGATTTCCTTTTTGGAACCTGTTTAATATAATCTATGGCCCTCGCT
GTATCTAAATTTCAATTTATTTTTCTCTTTTTTGGTCAGCCGTGATGACC
CTTTAAATCTCTTTTTTCATTTTCATAAGACGACAAAAAGTGAAGGCGTT
TATTCGCCTTTTTTGGTCGGGCGTGGGCGGAATTGTGCACAGTTGATGAT
TGTTATCCGATCGGGTTAAGTTTGGTTTTCCGATCTGTGTATTTGCTCTC
CAGCTTTTTTCGGGCAGCGTTCCGGTTGGGATACGCTTTCAATTTATCCA
ATCGGGCTAAGTTTGGTTTCCCGATATNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT
CTAAATATCTATCCTAACTAAGAGACGAATAATTATTCTGTCATACAGAT
TGTAACATGGCATATTTTCGTTAATCCATATTGTTTACAAACGTAAATTT
AATGATTTTTTTACTCTCGTTTTAGTAAATCATATCAATTTTTAACAACA
TATCTTTCTAGTCATATTAAGCAATTTAGGCTGACCTTCCAGCGCAGCTG
GTTTATTTTTATCTAAATTTTCACTCGATTCCCCATGTGAAAAACCAGTA
AAAAATAAAATAGTTTTTTGTTTGTTATAAAATTTATTGTTTATTTTCAG
TCTTCCTACTCAACGTCTTTTTTTTATTAGAACTTTTGAATATTAGTTTT
TTTTTTTCATTTTTGATTCTCACATCCCTTATCTTTATTTCACTATCAAG
CGTTAGTTGTGTACTTCTTACAATCTCGGTCAAAATATATTGAGAAATTT
GGGTATTTCCTCGTTTTTAGCAATTTAAAAGTTCGGGCGAAAAAGTCGCT
TTTGGGCTAATTGATAAATCTAATCGAATATTTCAATTCGGGAGGGGTTT
ATAGACTTCCAGGCTATATTCTAAGCCCTATTGGACCATTCTTGAACTTT
TGGATCCTGAGGTGCTAAGCTAATTCTTAAGGCTAGTGTTAAAACTCTAC
TGCTCTCTCTAACCTAAGTTAGAGCCTTTTTAAATCGTTCGTGGCCATAA
GATTTCGTGAAAATTTTCCTTTTTTTCTCAAATATTATGATTTTCATTGT
AGGCCCCTCATATCATATTCTATAGACCTTAAAAAGATGTTGTGTCCAAG
ACTTCTAAAGATGCTTTTCTCGTTTTTTGTTTCCTATAAAAAATCTAATA
TTTATCTTGTTTGCTCGAAAATGGAAGATACTCGTCGGAGCCAAGATTTT
TCAAAATTTACTTTTAATAAGTATATACTTTTCAATCGGTTGTAATATTG
TTTGTGATACGGTTTTAATTTTATGACTAGTGTTGGATTTCATGAAAAGA
TAGAACTGCTGGGTATAATTATCAGCAACTGTTGAAGGCCAGAGAATCCA
TGATGCAAAACAATATTTAAAAAACTGAGGTAGAAATATTTGGAAGCAGG
AAAATATTAATTTTTATGGACAGTTGAAACTATGTATTACATCTGTGGGT
ACGTACCCCTTCCAGGGACAACTTCTAATAAATGGGCTAGATAGACGATT
TCTTGAGTTGATGGGCTACTTTGAATTTCTTGCTTTGAAGTTGTTCCTTA
CTGTTTAACGCGCATGTGTGCTTGACCTTGCTCACTTTTTTATGCCCTTT
CTACACTGGGCCAAGCATTGACACACCCCCTTCTCACAGACCCACTGGGA
CCCCTTCCCACTGGAAAAATTGGCCAAAATATCGTCCCCGGTGGAAAAGT
ATCCTCCAATTTTTATCCCCGCTGAAAATAATCAAATTAAGCAATCCTCA
CTGCAAATAATTTACTATTTTTACCAACTCCACTGAACTTTCTGACTTGA
AAACGAAAGAATTGAAATCCCCATCCATAAAAAATATGAGAACATCAATC
CTCATCGAGTTTCAGTCCGTTATTTTTATCCCCACTGGCTGAAAAGTCCT
ACCGGGTCTGTGAGAAGGGGGTGTATTGACATAACTGAGAGATCTTAAAA
CAATTAACCGTTACTCTATTGCGTTACTTTCCTGTGCTCAGTTTTACCTT
ACGCAATCGCTGTGATATCCAACAATAATTGCCACTGTTGCCACGCTTGC
CACGAGAACTTCAGCTATAGGCCCCCGTGTACTGTGGAAAGTAGTACAAT
ACTATTATAACATTATATGATTATAATGATGTCATTCTTTACGTAGTTGG
TGTAATGTAATGAACTGAAAATCTTTAATACATATCGACACTTTTTTCAA
ACGCACGACAGTCCACTTCAGAATGACGCGAAAAAGAACGGCAACTCCAG
AACACACGTATATCGTGACTTAGCCAAAACTTTTGTTAATTTGATCGGAC
TTTTAAAGAAAAGACTTACACCAGATTTTCAAATCATAGCAAGGGTCTAT
AGTTTTGAGTTTTAAAAAATTAATGGGCCTCCGATATGTTCCTAACACTA
ACATTTCTTTGTTGATAGAATGACCTTTACAAAATATTTTTAGCTAAATA
AGCTTTCTGAGAAATAGTTTTAAGAAATCTGTCTTGATGGCACTACTAGA
AGATGACAGCCGTTTATTAGATTTTTTTGATTTTATAAAGTTGAGAAAAT
TTAAATCATGACTTTAACGCGAAGTAAAATATTTGTAAATTTTCGAATGA
CCAATTAAAATGGTTAATTTGTGTAATCTGTGTATACTTATTAAAAAGAT
TATAATTTCGAAATGGCGATGATAAGTAACCGAACTAAATGTATCTCTTT
TCAACACAGAAGGAAAAATGGTTGCGCAGGGTAAAATGTTCCGAGTGTTT
GCTTTTTATTCTTTTCACATTGAATTTCAGTTTAGTAGTTAGTAGCTAGA
AACTTTAAATGTCTTATCACTTGAGTTGGTTAGTGTTTGATTTGTTCGAG
GGTCACATTTAAAATATTATGATCAAGAAGGACACGTTTTTTTATAAGAT
CATCCATTTTGAGTTTTAAGCCTAATTATGTTCTTTAACCCTATTAGCCC
CAAGCTTTTTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTCTAGTTTTTCAAATTCATATTGTCAATA
CCTATCACGTGTCAAAATTTGAAGATGATTGAAGAAATAGTTCAGAAATT
ATCAGCACTTTAAAATTTTGAGTTTTAAGCGATCTTAGCTGGATTTTATG
TCATGTTTCACAATAAAGTCATAAAACCTGATCTGGACAAGCTATAACCC
TAAAATTTTGCACAAATACTCTTTAATAAGATTTTGTTAAAAGTCAGAAA
GTTTCAAGTCGTTTAAAAAGAATTTCACCGAGAAATACGCAAAAGAACAC
CAGCGTGGTAGATTCTACCCCCCCCCTGGGGCTAATAGGGTTAAATGATC
TTATTTTCACCACTTTGTTAAGAAATTAGGTATTTTGGAGTCCACGAATT
TGGTTTGAATGAAAAATCATATTTTCTCGTTTCCAGGATGACGTTCAATC
AGTTGGACACTGACGACGAAATTACCGAGAATGACCGACTTTTAACGAAG
AAAACTCGCAAACAACGACAATCACCTAAATCTCAACGAGATATNTCATA
TTTTCTCGTTTCCAGGATGACGTTCAATCAGTTGGACACTGACGACGAAA
GTACCGAGAATGACCGACTTTTATCGAAGAAAACTCGCAAACAACGACAA
TCACCTAAATCTCAACGAAATCCCGAATCTCCTAACAAAGATGCCTCAAA
ATGGGAACGGATTACATCAGCCATTAGAAAGAGGCTGAAAAAAGATGGCC
TTAGGATGGTCTTACTTATTATCTTGAATGGATTTTACCTCTACTTTGGT
GGAGTGGTATTCTATTTGCTGGAGACGAAACCAAAGTTTGTCGTGGATAA
AAGGAAACACGTTGAAATGCTGTTCAACACTTTTAAGGTTAGGTTCATTA
CAAGTTCAATCTGACGTTGCGTCATGTGGGATACTCCAAATTGTCACAAA
ATACACGTTTTTTTTAGAATAAACTATATAAGAACATGAGGCTTCGATGG
CCAAAATATTAGGAACAAGCTAAGAACATTTTAAGTCTTTTCAGACTCTC
TAACACCAGATTACTTAGGAAAATGGACAAAAAGACTCAGAAATGGTGAA
AATAAGAATATGTTAAGAACATTGTCAGGCTCAAAAATTTTGGGTGTTCA
CATAAATAAAAAAACGTGTACCTCGTTATCACTTTCAAAAGAGTGGCGCC
CTCCCCTACCTTTGGGTAGATAGCTATCGAAAGAGGGGCCTCCGGGTCGC
CTCTGACTGCGGTTGGAGACTTAATTAGTATGATAGATTGATGGGGAGCT
CTACTTTACCATTCTTTTCCTTTTCGTAGAGTTTACATTTGACCGCTGAC
CACATGATGATGAATATCAGCAATATTTCAACACATGACGTCAATAAAAT
ATCATCTGTTCTGCAAAATATTCATTCTGAATTTTCAGAAAGTGAAAGTG
AAAGCTGGACAGTCACGAATGCTGTCTTTTTTGCATCAACTGTTGTTACT
ACTATAGGTAAGTTTTCGTTGCATTTACTGTTTTTCATGTTTGGTGGGGC
GAGACCAGAAATAGGTTGCACGCATCCTCTCTGATATATCACAGTGAATG
CGTGTAGCCTGGACCAAAAACAGAAAATTTTTAATTAGAAATGCTGTATT
TTTTGTTTGGGAAAGCCAGACCATTTTTTTTTGTTTGGGAAAGCGAGACC
AGCGATTTTAATTTCACTTTTGGTCTATCAAAATTTCAAAATTAATTTTC
TTCGAAAATTAAAACTTACTACAATCTGTTTCACACTTACGCGAATTGGA
CATTCCATTTTATATCCATACAGGGGGTGGACGAACATTTCCAGAGGGTT
ATCCGAGAAAGATTTCCAGGTGTGTTGTTTCAATTTCCAAGGGGGTAAAA
AGTTATTCTAAAATTTCCAGGGGGTAAAAGACTGATTTTAATTCGTCCAC
CCTTATTTAAGATATGAGAAGAATTTTTCCAAGGGAAATTTTGCAAATTT
TTGCCCTTTTCTAGGGGGTATCCACACATTTTCAATAATTTTCAGGTTCG
GTTTTAGGTTCGTCCACCCCCCTGTGTGGTTTTTTAATGGAACAGCCCAA
TGTATCGTCCGAACTGACAAAGAAACATCATATAATTTTTCCTGTGAAAA
TGTCAACAATGTCAAAGGAAAAATTATATGATCTTACATACTTTACTTTT
TCGACAATTTCCCTGCATCCACTCTTATGCTAAAGTAAAAAAATTATGCA
CCGTTGGAAAGATATCTTGGGGGAGAACGATCTAAAATATTTTAGACTTA
GAGGAGGTTTAAATATTCTAAGAAGTGTCAGGGTTTAAGAGATTGAAATT
GTTGAAAAATTTAGTGTCCACATACATTCGAGATGACTTTAATTCTTTAT
TATTTAGAAGGATAAGCTTTTAAATTAGGTTGTCCATTGTATCTCTGAAA
TTAAAAAAAATAGCTTCCTTCATTTTTTAGCAGATTCACTACTTAACAGA
ATTTTTTTTTCGTTACCTAGGTTACGGTAATATGGCGCCCGTGACAACAG
GAGGGCGTTGGTTTTGTGTATTTTACGCCATCGTTGGCGTCCCGTTGACT
GTCATGTTACTCGCACTTGTTGGAAAGATAATTTCGAAATACATCAATCA
CTTGTGTAACTTCATTGTCAAAACGCTGAGGGAATATCTTTATTCCAAAT
ATGAATATGAGCAGTAAGTTTTTCTTTTCCTATTTATAACTCCGAGGAGG
GATATCCAATAGGGTATATTCCGTAGGCGAGTGCGTTTTATTTTTGCGCA
CGTGTTCTATGCGAAAATTAAGGTATGGTAACAGTGGTCTCTAATGTTGC
ACTAAAGTTGTAATCTAACAGCCAATTCAATTGACTTCAAAATGTGCCAT
TTTTGCCCTGATTGCCAATTATTTTGCATTCGATTGACAAAAATTTGGCA
AATGTGGCAAAATTTGAGTGCCATAAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATTCTTGGCATTTTTGGAACTTACCTCCATACGTCTCCATGCAAA
ACACTGTTCCCACGAGACCTGTGTTCTTTTCGCTCCAATTTTGCCACTTT
TGCCAAAAAATAGAAGACCTTCCAATGCTAAAGCAAAACAGTGCCGATCG
GCAATTTGATTGGTTAAAAAATCGTTTGTTTCCAAACGCCGACAGAAAAC
TGCTGACCAAGCATCACAAAACGGAAATCATAATGGCGGCGTGGCGATGT
ACAAATTTGCCATAAAGCTGTGATCTTTTGACATTGAAATTGTAGATTTG
GCAAAGTTGGCGAGTATGGCAAATTTGGAAGTCGATCGAATTGGCTGTAA
ATCTAAAGTTGCACTTTTGATTCCTGATCCGAACGCTGTTGTTGGTTGGA
GCTTCTCGTTATTAGAATGGCGTATCAGGCAAAATAGCTCTTTTCATAAA
TTACGTCACGATCAGCGCTTACCTCTTTTTCAAAATATTGCTATGGTAAT
TGATTCGCAAAGGAGTTCATAAAACGTTACTCTATTTCTAGAAGTAATAA
CTGGAGACTCAAGGGGTTAAATAACCTATGGTTTCCACTGACCTTTATAT
ATCCCTGGACCAAGAAATATCCGCCATCTTTGATTGGAGTTTTTTTGGAA
TTGGTACCAGAGAGGAATTAACGTCTAACGCCGCTACATCGTTAAAAGAA
TTTGAGAAAAAGTAGACCTAGCGCTCTTGATGCATTTACACCACTATCAA
GTAGCGCCGCCATTAGGGTACCACTTTTCAAAAAACTCCGATCAAAGATT
TTGCTTAGCTGGAATTGGGAAGCTTGGTCCAGGGTATATAAAGGTCAGTG
ATGGTTTCCAATTGGACTCAATAATATGGCTGTTTTTCGGCTTGAAAATT
GAATAATGCTGCATTCGAAGCTATTGAACTTTTCAATCCATTCTTCTTAT
TCACCAGGGTTGACGAAGGAACAGAGCTTCGAGCACCAGTCTGGTTGGCT
CTTCTCTTCATGCTTTTGGTGACTTCGATATTCGCACTGATGTTCATGAA
GATGGAACAGTGGTCATTCTCCAAATCACTTTATTTCATCTTCATTACGT
TTACCACGATTGGTTTTGGTGATATTGTACCACATAATGATAATGTAAGT
TTTTTTCATTCCGATTTCCCCGATTTTTACCACCTACAACATAGATTTTT
CGCTCAATTTTCTATTCTAAAACCATTTGCAAACGTGCTTTACTGCCATT
GCGATTTTGCCATGTCTTTGGCATAATTGCCATATAGAATGATTTCACCG
ATTAAGCAGAGTTCGTTCGTACTGACAAACATTTCTAAGAGAGAAACTTT
ATCAAAACTATTTTTGGCAACTATGGCTTGGACAAACACTCTCACTCTTT
CATAGACCTTTATTAAGTAGACTATTGTTTCAGTTTTAAATATAGTAAGA
GGTAGAATAGCAAAGAGTCATATCACTATATTTCATTCAGAGTAGAAATC
AATTCAGGAACTCCCAAAGCTGCACTCTTAACTACACTGCTCAGCACACT
AATATTTCACCCAGAGTAGAAACTTATCCAGGAACTTTTCAAAGTTGCAC
TTCTAAGTGCACTGCTAAGCGCGAGGCTCAGCGCACTAATATTTCAACCA
GAGTAGAAATCAATTCAGGAACTGTTCAAAGTTGCACTCCTAAGTACNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGAAT
TAACGTCTAACGCCGCTACATCGTTAAAAGAATTTGAGAAAAAGTAGACC
TAGCGCTCTTGATGCATTTACACCACTATCAAGTAGTGCCGCCATTAGGG
TACCACTTTTCAAAAAACTCCGATCAAAGATTTTGCTTAGCTGGAATTGG
GAAGCTTGGCCCAGGGTATATAAAGGTCAGTGATGGTTTCCAATTGGACT
CAATAATATGGCTGTTTTTCGGCTTGAAAATTGAATAATGCTGCATTCGA
AGCTATTGAACTTTTCAATCCATTCTTCTTATTCACCAGGGTTGACGAAG
GAACAGAGCTTCGAGCACCAGTCTGGTTGGCTCTTCTCTTCATGCTTTTG
GTGACTTCGATATTCGCACTGATGTTCATGAAGATGGAACAGTGGTCATT
CTCCAAATCACTTTATTTCATCTTCATTACGTTTACCACGATTGGTTTTG
GTGATATTGTACCACATAATGATAATGTAAGTTTTTTTCATTCCGATTTC
CCCGATTTTTACCACCTACAACATAGATTTTTCGCTCAATTTTCTATTCT
AAAACCATTTGCAAACGTGTTTTACTGCCATTGCGATTTTGCCATGTCTT
TGGCATAATTGCCATATAGAATGATTTCACCGATTAAGCAGAGTTCGTTC
GTACTGACAAACATTTCTAAGAGAGAAACTTTATCAAAACTATTTTTGGC
AACTATGGCTTGGACAAACACTCTCACTCTTTCATAGACCTTTATTAAGT
AGACTATTGTTTCAGTTTTAAATATAGTAAGAGGTAGAATAGCAAAGAGT
CATATCACTATATTTCATTCAGAGTAGAAATCAATTCAGGAACTCCCAAA
GCTGCACTCTTAACTACACTGCTCAGCACACTAATATTTCACCCAGAGTA
GAAACTTATCCAGGAACTTTTCAAAGTTGCACTTCTAAGTGCACTGCTTA
GCGCGAGGCTCAGCGCACTAGTATTTTAACCAGAGTAGAAATCAATTCAG
GAACTTTTCAAAGCTGCACTCCTAGTGTACTCTCTCAGAACACTAATATT
TCATCCAGAGTAGAAATCAATTCAGGAACTTTTCAAAGCTGCACTCCTAG
TGTACTCTCTCAGAACACTAATATTTCATCCAGAGTAGAAATCAATTCAG
GAACTTTTCAAAGCTGCACTCCTAGTGTACTCTCTCAGAACACTAATATT
TCATCCAGAGTAGAAATCAATTCAGAAACTGTTCAAAGTTGCACTCCTAA
GTACTCTTCCAGCACAACTAATATTTCATCCATTAGTAGAAATCAATTCA
GGAACTGTTCAAAGTTGCACTTAAGTACACTGCTCAGCACTACTAATATT
TTGGCTGGAGTAGAAACTAATTCAAGCAGCATCAATGATTACAAACTACC
AACACACCACAGTAAATGAAAAGTCTAGAAACTATAGCATTAATACAAAC
ACCAGCAAACACTACTAAAAACATACACAAACTGAAATTCTTAATTCAGA
AAAAGAATTTAAGAAAGTACCGTATTTCTTCGAATAAACGCTACTGGCGT
TTATGAAATTTTTAGGATTTTAAAAGAGGCGTTTAATTCTGGGGGAGTTT
AAAAGAAGGGGTGTTTATTGAATAATTTTCAACCAAGGTCACTTTGATAA
AGTTAAGTGGAGATTCGAGCGGGAGGGAGGGGGGCGTTTAAAAGAAGGGG
TGTTTATTGAATAATTTTCAACCAAGGTCACTTTGATAAAGTTAAGTGGA
GATTCGAGCGGGAGGGAGGGGGGCGTTTAAAAGAAGGGGGGTTTATTCGA
AGTAATACGGTACACTGTTTTTCTTTATCAGGCAATTTGGTTTAATGTCA
CTTTCCTTTACATTGGACTGGCTGCATTGTCCATTACCATAAACCTCTTG
ATTGCAAATATCACACATCAATATCGAAAACATAAACAAAAAATTAAGAT
TGTTCAGAAAATCGAAGAAGAACTAGAGGACTCGGACGAGGAAACTTTAC
CGGCAGACGAAAATGGTGACGTCACCGAAATGGCAGATTTTACTAATGGT
GGTAATGGTGGCGGTAAAGTGGCGGGTGATTCCCTGCGACGTTTATCGAA
TACACCCGTTGATAATAATTCGAATAACAACGAAAACAATAATGATAAAA
ATCTTCAAAACTTTGGGGATGGACTATAAACGTTAATAGTTTTAGGCAGT
CTGTGCCACTAACTCGATCGGGAAGATTCTTCCGAAATGGGAAGAACCTT
CCCGAATGGGAAGAACTTACTCTAATTTTTCTCTGCCGGTTTGGGAAGAT
TCTTCCTCTTTGGGAAGTTGAAAATTGACTGAATCTTCGGTGAAGCTGTA
CGATGACCGGCGAAAGTTGAAAACTTTTGGAGGTGAAAAAGCATCAAATT
TTAAGGTTTTTCACCGAAAGAAAAGTAGGCTTTACTGTAGAAAACTTGTT
AGATTGTGAAAAAACTGCGTAAACTTCCCAAACGGGAAGTTCCAACCCGA
TCGACTTTTCCTTATTTTCCCGCTTCTTCCCGATCTGGAAGTCCGTTTTT
TAACTCTTACCCGTTTAGGGTGTCAAGTTAATTTCTCATTCGGGAAGGTT
CTTCCCATTTCGGAAGAATCTTCCCGATCGAGTTAGTGGCACAGACTGTT
AGGTGTGTTGTATTAGTGCGATTATAATAGTATGTCTTTTTATGTCCTAT
TACCATGAGTTTCACCTTAGCTGGTGATTAAGATATTCACAGCGGTGAAT
GGTGAATTTTTTTGTCCCTCCGTCTTCGCCAGACCAAAATACAACCCCTG
TAGAAGTTAACATGCATTCAGCTTTCAAAACAACACCGAGGAAAATGTAG
TCACAGACAATGTAGTTTGAATCGCGGCCCTCTATAGATAAACTCCCTAT
ACACGTTTTTTTTTTTATTAGAACACCTAAAATTTGTCTGAGCCTGGATG
TGCTTATTTTTTTAGCAATTTTCAGCCTAAAATGTTCTTAAATGCGTTCT
TAATTTTTCAGACTACTCTAAATCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014119XLOC_014119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025148-exon-sc0000521-1575043694:181189..181341TCONS_00025148-exon-sc0000521-1575043694:181189..181341Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1575043694:174055..174376TCONS_00025148-exon-sc0000521-1575043694:174055..174376Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1575043694:173435..173612TCONS_00025148-exon-sc0000521-1575043694:173435..173612Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1575043694:172229..172421TCONS_00025148-exon-sc0000521-1575043694:172229..172421Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1575043694:170448..170634TCONS_00025148-exon-sc0000521-1575043694:170448..170634Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1575043694:166715..167910TCONS_00025148-exon-sc0000521-1575043694:166715..167910Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1510915933:181189..181341TCONS_00025148-exon-sc0000521-1510915933:181189..181341Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1510915933:174055..174376TCONS_00025148-exon-sc0000521-1510915933:174055..174376Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1510915933:173435..173612TCONS_00025148-exon-sc0000521-1510915933:173435..173612Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1510915933:172229..172421TCONS_00025148-exon-sc0000521-1510915933:172229..172421Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1510915933:170448..170634TCONS_00025148-exon-sc0000521-1510915933:170448..170634Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1510915933:166715..167910TCONS_00025148-exon-sc0000521-1510915933:166715..167910Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1491911889:181189..181341TCONS_00025148-exon-sc0000521-1491911889:181189..181341Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1491911889:174055..174376TCONS_00025148-exon-sc0000521-1491911889:174055..174376Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1491911889:173435..173612TCONS_00025148-exon-sc0000521-1491911889:173435..173612Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1491911889:172229..172421TCONS_00025148-exon-sc0000521-1491911889:172229..172421Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1491911889:170448..170634TCONS_00025148-exon-sc0000521-1491911889:170448..170634Clytia hemisphaericaexon
TCONS_00025148-exon-sc0000521-1491911889:166715..167910TCONS_00025148-exon-sc0000521-1491911889:166715..167910Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000521supercontigsc0000521:166715..181341 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.139205	0	0	0.199349	0.157528	0.190051	0.177923	0.249137	0.154298	0.449296	0.49225	2.55267	2.70058	0.251818	0.450399	0.443883	0.227483	5.61023	8.26267	0.34681	0.209141	0.408845	0.308186	1.32744	0.874876	0	0	0.164073	0
Blast
[Close]
BLAST of TCONS_00025148 vs. Swiss-Prot (Human)
Match: KCNK3 (Potassium channel subfamily K member 3 OS=Homo sapiens GN=KCNK3 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 4.704e-21
Identity = 76/269 (28.25%), Postives = 132/269 (49.07%), Query Frame = 2 
Query:  323 LKKDGLRMVLLIILNGFYLYFGGVVFYLLETKPKFVVDKRKHVEMLFNTFKSLHLTADHMMMNISNISTHDVNKISSVLQNIHXXXXXXXXXXWTVTNAVFFASTVVTTIGYGNMAPVTTGGRWFCVFYAIVGVPLTVMLLALVGKIISKYINHLCNFIVKTLREYLYSKYEYEQVDEGTELRAPVWLALLFMLLVTSIFALMFMKMEQWSFSKSLYXXXXXXXXXGFGDIVP-HNDNAI-----WFNVTFLYI--GLAALSITINLLI 1105
            +K+  +R + LI+    YL  G  VF  LE++P+ +  +R+ +E+     ++ +        N+S     ++ ++   L+             W    + +FA TV+TTIGYG+ AP T GG+ FC+FYA++G+PLT+++   +G+ I+  + +L +   K L           + D    +   V +     +    I A  F   E W+F ++ Y+ FIT TTIGFGD V    D A+     +   +F+YI  GL  +   +NL++
Sbjct:    1 MKRQNVRTLALIVCTFTYLLVGAAVFDALESEPELI--ERQRLELRQQELRARY--------NLSQGGYEELERVVLRLKP------HKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTLVRYLLHRAKKGL--------GMRRAD--VSMANMVLIGFFSCISTLCIGAAAFSHYEHWTFFQAYYYCFITLTTIGFGDYVALQKDQALQTQPQYVAFSFVYILTGLTVIGAFLNLVV 243
The following BLAST results are available for this feature:
BLAST of TCONS_00025148 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNK34.704e-2128.25Potassium channel subfamily K member 3 OS=Homo sap... [more]
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